BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006205
(657 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/654 (91%), Positives = 617/654 (94%), Gaps = 4/654 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MKAM MDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGG +RVGSCFG+
Sbjct: 237 MKAMTMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHRVGSCFGM 296
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALESAVVLDVQNIACGGRHAALV KQGE+FSWGEESGGRLGHGVDSDVLHPK
Sbjct: 297 KMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPK 356
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LID+LSN NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL
Sbjct: 357 LIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 416
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSISCGPWHTAVVTS+GQLFTFGDGTFGVLGHGD KSVS PREVESLKG RTV +
Sbjct: 417 EGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVIS 476
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVE+MVGN SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV+PN
Sbjct: 477 ACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPN 536
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP RVEGKL+KSFVEEIACG+
Sbjct: 537 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGA 596
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHGDTDDRNSP+LVEALKDKQVKSIACGTNFTA ICL
Sbjct: 597 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICL 656
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV
Sbjct: 657 HKWVSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 715
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNCF+KLRK +TD SS S+VSRRG NQG NE IDKDEKLDSRSR QL RFSSMES K
Sbjct: 716 CDNCFSKLRKAIETDASSQSAVSRRGVTNQGLNELIDKDEKLDSRSRVQLARFSSMESLK 775
Query: 541 QSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
Q+E R SKRNKKLEFNSSRVSPIPNG SQWG KS NP+FGSSKKFFSASVPGSRIV
Sbjct: 776 QAESRTSKRNKKLEFNSSRVSPIPNGGSQWGG--ALKSLNPVFGSSKKFFSASVPGSRIV 833
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SR TSPISRRPSPPR+ TPTPTL GLTSPKIVVDDAKRTNDSLSQEVIKLR QV
Sbjct: 834 SRTTSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTNDSLSQEVIKLRVQV 887
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 1165 bits (3013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/653 (94%), Positives = 633/653 (96%), Gaps = 1/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MKAMAMDAFRVSLSSAVSSSSQGSGHDD DALGDVFIWGEGTGDGVLGGG +R GS FGV
Sbjct: 229 MKAMAMDAFRVSLSSAVSSSSQGSGHDDSDALGDVFIWGEGTGDGVLGGGAHRAGSGFGV 288
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+DS LPKALES VVLDVQNIACGGRHAALV KQGEVFSWGEESGGRLGHGVDSDVLHPK
Sbjct: 289 KLDSLLPKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPK 348
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LID+LSN+NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL
Sbjct: 349 LIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 408
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSISCGPWHTAVVTS+GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA
Sbjct: 409 EGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 468
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN
Sbjct: 469 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 528
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG+LSKSFVEEIACG+
Sbjct: 529 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGRLSKSFVEEIACGA 588
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN PSLVEALKDKQVKSIACGTNFTAAICL
Sbjct: 589 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAICL 648
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG+DQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKP+RV
Sbjct: 649 HKWVSGIDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPFRV 707
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNC++KLRK +TD SS SSVSRRGS+N G NEFIDKDEKLDSRSRAQL RFSSMES K
Sbjct: 708 CDNCYSKLRKAIETDASSQSSVSRRGSVNHGSNEFIDKDEKLDSRSRAQLARFSSMESLK 767
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q+E RSKRNKKLEFNSSRVSP+PNG SQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS
Sbjct: 768 QAENRSKRNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 827
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTLGGLTSPK+VV+DAKRTN+SLSQEV KLRAQV
Sbjct: 828 RATSPISRRPSPPRSTTPTPTLGGLTSPKLVVNDAKRTNESLSQEVNKLRAQV 880
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/653 (92%), Positives = 626/653 (95%), Gaps = 1/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MKAMA+DAFRVSLSSAVSS SQGSGHDDG ALGDVFIWGEG GDGVLGGG +R GS FGV
Sbjct: 235 MKAMAVDAFRVSLSSAVSSLSQGSGHDDGGALGDVFIWGEGMGDGVLGGGTHRAGSYFGV 294
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS PKALESAVVLDVQNIACGG+HAALV KQGE+FSWGEESGGRLGHGVDSDV+HPK
Sbjct: 295 KMDSLFPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPK 354
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDALSN NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL
Sbjct: 355 LIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 414
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS+S+P+EVESLKGLRTV+A
Sbjct: 415 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQA 474
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAV+EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN
Sbjct: 475 ACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 534
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVA TTSGHVYTMGSPVYGQLGNP ADGKLP RVEGKLSKSFVEEIACG+
Sbjct: 535 FCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLSKSFVEEIACGA 594
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT+FTAAICL
Sbjct: 595 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAICL 654
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCRLPF NFKRKRHNCYNCGLV+CHSCSSKKSLKASMAPNPNK YRV
Sbjct: 655 HKWVSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRV 713
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNC+NKLRK +TD SS SSVSRRGS+NQGP EFID+DEKLD RSRAQL RFSSMES K
Sbjct: 714 CDNCYNKLRKAIETDASSQSSVSRRGSVNQGPREFIDEDEKLDFRSRAQLARFSSMESLK 773
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q+E RSKRNKKLEFNSSRVSP+PNG SQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS
Sbjct: 774 QAESRSKRNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 833
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKR +SL+QEVIKLRAQ+
Sbjct: 834 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRNYESLNQEVIKLRAQM 886
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/653 (91%), Positives = 630/653 (96%), Gaps = 1/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MKA+AMDAFRVSLSSAVSSSSQGSGHDDG+A+GDVFIWGEGTGDGVLGGG +RVGS FGV
Sbjct: 240 MKAVAMDAFRVSLSSAVSSSSQGSGHDDGEAMGDVFIWGEGTGDGVLGGGTHRVGSFFGV 299
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALESAVVLDVQNIACGG+HAALV KQGE+FSWGEESGGRLGHGVDSDVLHP+
Sbjct: 300 KMDSLLPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQ 359
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LI+ALSN NIE VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL
Sbjct: 360 LIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 419
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSISCGPWHTAVV+SAGQLFTFGDGTFGVLGHGDRKS+S+PREVESLKGLRTV+A
Sbjct: 420 EGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQA 479
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV+ALVEPN
Sbjct: 480 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPN 539
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLT+A TTSGHVYTMGSPVYGQLGNPQ+DGKLP RVEGKLS+S VEEIACG+
Sbjct: 540 FCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGA 599
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSKTEVYTWGKGANGRLGHGDTDD+N PSLVEALKDKQVKSIACGTNFTAAICL
Sbjct: 600 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAICL 659
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCRLP NFKRKRHNCYNCGLV+CHSCSSKKSLKASMAPNPNK YRV
Sbjct: 660 HKWVSGVDQSMCSGCRLPL-NFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRV 718
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNC+NKLRK +TD SS SSVSRRGS+NQGP+EFIDKDEKLD+RSRAQL RFSSMES K
Sbjct: 719 CDNCYNKLRKAMETDASSQSSVSRRGSVNQGPSEFIDKDEKLDTRSRAQLARFSSMESLK 778
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q+E RSKRNKKLEFNSSRVSP+PNG SQWGA NISKSFNPMF SSKKFFSASVPGSRI+S
Sbjct: 779 QAESRSKRNKKLEFNSSRVSPVPNGGSQWGAFNISKSFNPMFASSKKFFSASVPGSRIIS 838
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTN+SLSQEV+KLRAQV
Sbjct: 839 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNESLSQEVLKLRAQV 891
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/654 (91%), Positives = 618/654 (94%), Gaps = 3/654 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSAVS+SSQGSGHDDGDALGDVFIWGEGTGDGVLGGG +RVGSC G
Sbjct: 234 MKTMGMDAFRVSLSSAVSTSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGA 293
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS PKALESAVVLDVQNIACGGRHAALV KQGEVFSWGEESGGRLGHGVDSDVLHPK
Sbjct: 294 KMDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPK 353
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LI+ALSN NIELVACGEYH+CAVTLSGDLYTWG+GTYN+GLLGHGN+VSHWVPKRVNGPL
Sbjct: 354 LIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPL 413
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVS ISCGPWHTAVVTSAGQLFTFGDGTFG LGHGDRKSVS+PREVESLKGLRTVRA
Sbjct: 414 EGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRA 473
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVGNSSSSNCSS LFTWGDGDKGRLGH DKEAKLVPTCV AL E N
Sbjct: 474 ACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCV-ALAEHN 532
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
C+VACGHSLTVALTTSG VYTMGSPVYGQLGNPQADGKLP VEGKLS+SFVEEIACG+
Sbjct: 533 VCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEIACGA 592
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHGDTDDRN+P+LVEALKDK VKSIACGT FTAAICL
Sbjct: 593 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAICL 652
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCR+PF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV
Sbjct: 653 HKWVSGVDQSMCSGCRMPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 711
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNC NKLRKT +TD SSHSSVSRRGS+NQGP E IDKD+KLDSRSR QL RFSSMESFK
Sbjct: 712 CDNCLNKLRKTVETDASSHSSVSRRGSVNQGPLELIDKDDKLDSRSRNQLARFSSMESFK 771
Query: 541 QSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
Q E R SK+NKKLEFNSSRVSP+PNG SQWGALNISKSFNP+FGSSKKFFSASVPGSRIV
Sbjct: 772 QVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGSSKKFFSASVPGSRIV 831
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSPISRRPSPPRSTTPTPTLGGL SPKIVVDDAKRTNDSLSQEVIKLR+QV
Sbjct: 832 SRATSPISRRPSPPRSTTPTPTLGGLASPKIVVDDAKRTNDSLSQEVIKLRSQV 885
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/655 (91%), Positives = 620/655 (94%), Gaps = 3/655 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSAVS+SSQGSGHDDGDALGDVFIWGEGTGDGVLGGG +RVGSC GV
Sbjct: 235 MKTMGMDAFRVSLSSAVSTSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGV 294
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS PK+LESAVVLDVQNIACGGRHAALV KQGE+FSWGEE+GGRLGHGVDSDVLHPK
Sbjct: 295 KMDSLFPKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPK 354
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LI+ALSN NIELVACGEYHTCAVTLSGDLYTWG+GTYN GLLGHGN+VSHWVPKRVNGPL
Sbjct: 355 LIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPL 414
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVS ISCGPWHTAVVTSAGQLFTFGDGTFG LGHGDRKSVS+PREVESLKGLRTVRA
Sbjct: 415 EGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRA 474
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL-VEP 299
ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT VA + V+P
Sbjct: 475 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKP 534
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
NFC+VACGHSLTVALTT GHVYTMGSPVYGQLG PQADGKLP VE KLS+SFVEEIACG
Sbjct: 535 NFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEIACG 594
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+YHVAVLTS+TEVYTWGKGANGRLGHGDTDDRN+P+LVEALKDK VKSIACGTNFTAAIC
Sbjct: 595 AYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAIC 654
Query: 420 LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 479
LHKWVSGVDQSMCSGCR+PF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR
Sbjct: 655 LHKWVSGVDQSMCSGCRMPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 713
Query: 480 VCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESF 539
VCDNCFNKLRKT +TD SSHSSVSRRG NQGP E IDKD+KLDSRSR QL RFSSMESF
Sbjct: 714 VCDNCFNKLRKTVETDSSSHSSVSRRGVANQGPLELIDKDDKLDSRSRNQLARFSSMESF 773
Query: 540 KQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
KQ E R SK+NKKLEFNSSRVSPIPNG SQWGA NISKSFNP+FGSSKKFFSASVPGSRI
Sbjct: 774 KQVESRSSKKNKKLEFNSSRVSPIPNGGSQWGASNISKSFNPVFGSSKKFFSASVPGSRI 833
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
VSRATSPISRRPSPPRSTTPTPTLGGLTSP IVVDDAKRTNDSLSQEVIKLR+QV
Sbjct: 834 VSRATSPISRRPSPPRSTTPTPTLGGLTSPNIVVDDAKRTNDSLSQEVIKLRSQV 888
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/655 (88%), Positives = 617/655 (94%), Gaps = 5/655 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MKAM +DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGG ++VGSCF +
Sbjct: 233 MKAMGIDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHKVGSCFSL 292
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALESAVVLDVQNIACGGRHAALV KQGE+F+WGEESGGRLGHGVDSDVL PK
Sbjct: 293 KMDSLLPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPK 352
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+DAL N NIELV+CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW+PK++NGPL
Sbjct: 353 LVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPL 412
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR SV++PREVESLKGLRTVRA
Sbjct: 413 EGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRA 472
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDKGRLGHGDKE KLVPTCVAALV+PN
Sbjct: 473 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPN 532
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FCRV+CGHS+TVALTTSGHVYTMGSPVYGQLGNP ADGK+P RVEGKLSKSFVEEIACG+
Sbjct: 533 FCRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGA 592
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHGDTDDRNSP+LVEALKDKQVKSIACGTNFTAAICL
Sbjct: 593 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAICL 652
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQSMCSGC LPF NFKRKRHNCYNCGLVFCHSCSSKK KASMAPNPNKPYRV
Sbjct: 653 HKWVSGFDQSMCSGCHLPF-NFKRKRHNCYNCGLVFCHSCSSKKCHKASMAPNPNKPYRV 711
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDS-RSRAQLTRFSSMESF 539
CDNC+NKLRK +TD SS SSVSRR SINQG +F++K+EK +S +SRAQL RFSSMES
Sbjct: 712 CDNCYNKLRKALETDASSQSSVSRRRSINQGSTDFVEKEEKPESVKSRAQLARFSSMESV 771
Query: 540 KQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
KQ E + SK+NKK E NSSRVSP+PNG SQWGA ISKSFNP+FGSSKKFFSASVPGSRI
Sbjct: 772 KQGENQFSKKNKKFECNSSRVSPVPNGGSQWGA--ISKSFNPVFGSSKKFFSASVPGSRI 829
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
VSRATSPISRR SPPRSTTPTPTLGGLTSPKI VDDAKRTNDSLSQEV+KL+AQV
Sbjct: 830 VSRATSPISRRASPPRSTTPTPTLGGLTSPKIAVDDAKRTNDSLSQEVVKLKAQV 884
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 595/654 (90%), Positives = 620/654 (94%), Gaps = 3/654 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGV+GGG +RVGS GV
Sbjct: 257 MKTMGMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVVGGGNHRVGSGLGV 316
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+DS PKALESAVVLDVQNIACGGRHAALV KQGE+FSWGEESGGRLGHGVDSDVLHPK
Sbjct: 317 KIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPK 376
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDALSN NIELVACGEYHTCAVTLSGDLYTWG+G YN+GLLGHGN+VSHWVPKRVNGPL
Sbjct: 377 LIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPL 436
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVS ISCGPWHTAVVTSAGQLFTFGDGTFG LGHGDRKSVS+PREVESLKGLRT+RA
Sbjct: 437 EGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRA 496
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV ALVE N
Sbjct: 497 SCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-ALVEHN 555
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVY MGSPVYGQLGNPQADGKLP RVEGKL KSFVEEIACG+
Sbjct: 556 FCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGA 615
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLT + EVYTWGKGANGRLGHGDTDDRN+P+LV+ALKDK VKSIACGTNFTAAICL
Sbjct: 616 YHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAICL 675
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV
Sbjct: 676 HKWVSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 734
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKLRKT +TD SSHSSVSRRGSINQG E IDKD+KLD+RSR QL RFSSMESFK
Sbjct: 735 CDGCFNKLRKTLETDSSSHSSVSRRGSINQGSLELIDKDDKLDTRSRNQLARFSSMESFK 794
Query: 541 QSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
Q E R SK+NKKLEFNSSRVSP+PNG SQ GALNISKSFNP+FGSSKKFFSASVPGSRIV
Sbjct: 795 QVESRSSKKNKKLEFNSSRVSPVPNGGSQRGALNISKSFNPVFGSSKKFFSASVPGSRIV 854
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSPISRRPSPPRSTTPTPTLGGLT+PKIVVDDAK+TNDSLSQEVIKLR+QV
Sbjct: 855 SRATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTNDSLSQEVIKLRSQV 908
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/654 (87%), Positives = 612/654 (93%), Gaps = 2/654 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGG + VGS FGV
Sbjct: 230 MKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGAHHVGSNFGV 289
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALESAVVLDVQNIACGG HAA+V KQGEVFSWG ESGGRLGHGVDSDV HPK
Sbjct: 290 KMDSLLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPK 349
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LI++LSN NIELVACGEYHTCAVTLSGDLYTWGDGTYN+GLLGHGN+VSHWVPKRVNGPL
Sbjct: 350 LIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPL 409
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSISCGPWHTAVVTS+GQLFTFGDGTFGVLGHGDRKSVS+PRE+ESLKGLRTV+A
Sbjct: 410 EGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQA 469
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE+KLVPT V L EPN
Sbjct: 470 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPN 529
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHS+TVAL+ GHVYTMGS VYG LGN QADGKLP VEGKLSKSFVEEIACG+
Sbjct: 530 FCQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGA 589
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEV+TWGKGANG LGHGDT+DRN+P+LVEALKDKQVKSIACGTNFTAAICL
Sbjct: 590 YHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICL 649
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCR+PF NFKRKRHNCYNCGL FCHSCS+KKS+KASMAPNPNKPYRV
Sbjct: 650 HKWVSGVDQSMCSGCRVPF-NFKRKRHNCYNCGLAFCHSCSNKKSVKASMAPNPNKPYRV 708
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNCFNK+RKT +TD SS +S+SRRGS+NQG EF KD+KLDSRS QL RFSSMES K
Sbjct: 709 CDNCFNKIRKTTETDSSSQASMSRRGSVNQGSLEFNGKDDKLDSRSHNQLARFSSMESLK 768
Query: 541 QSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
Q + R SK+NKKLEFNSSRVSP PNG SQWGA+NISKSFNP+FGSSKKFFSASVPGSRIV
Sbjct: 769 QVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPVFGSSKKFFSASVPGSRIV 828
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSPISRRPSPPRSTTPTPTLGGL+SPKIVVDDAKR ND+LSQEV+KLR+QV
Sbjct: 829 SRATSPISRRPSPPRSTTPTPTLGGLSSPKIVVDDAKRINDNLSQEVVKLRSQV 882
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/655 (88%), Positives = 620/655 (94%), Gaps = 4/655 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEG GDGVLGGG+++VGS FGV
Sbjct: 237 MKTMPMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGMGDGVLGGGVHQVGSNFGV 296
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALESAVVLDVQNIACGG+HAALV KQGEVFSWGEESGGRLGHGVDSDV HPK
Sbjct: 297 KMDSLLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPK 356
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LI++LSN NIELVACGEYHTCAVTLSGDLYTWGDGTYN+GLLGHGN+VSHWVPKRVNGPL
Sbjct: 357 LIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPL 416
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSISCGPWHTAVVTS+GQLFTFGDGTFG LGHGDRKSVS+PRE+ESLKGLRTV+A
Sbjct: 417 EGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQA 476
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE+KLVPTCV LVEPN
Sbjct: 477 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPN 536
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
C+VACGHS+TVAL+ SGHVYTMGS VYGQLGN QADGKLP RVEGKLSKSFVEEIACG+
Sbjct: 537 -CQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGA 595
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEV+TWGKGANGRLGHGDT+DRN+P+LVEALKDKQVKSIACGTNFTAAICL
Sbjct: 596 YHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICL 655
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCR+PF NFKRKRHNCYNCGLVFCHSCS+KKS+KASMAPNPNKPYRV
Sbjct: 656 HKWVSGVDQSMCSGCRVPF-NFKRKRHNCYNCGLVFCHSCSNKKSVKASMAPNPNKPYRV 714
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPN-EFIDKDEKLDSRSRAQLTRFSSMESF 539
CDNCFNK+RKT +TD SS SS+SRRGS+NQG + EF KD+KLDSRS QL RFSSMES
Sbjct: 715 CDNCFNKIRKTTETDSSSQSSMSRRGSLNQGWSLEFNGKDDKLDSRSHNQLARFSSMESL 774
Query: 540 KQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
KQ + R SK+NKKLEFNSSRVSP PNG SQWGA+NISKSFNP FGSSKKFFSASVPGSRI
Sbjct: 775 KQVDSRSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVPGSRI 834
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
VSRATSPISRRPSPPRSTTPTPTLGGL+SPK+VVDDAKR ND+LSQEV+KLR+QV
Sbjct: 835 VSRATSPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQV 889
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/654 (85%), Positives = 606/654 (92%), Gaps = 2/654 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK + MDAFRVSLSSAVSSSSQGSG+DD DALGDVFIWGEGTG+GVLGGG RVGS F
Sbjct: 233 MKTVPMDAFRVSLSSAVSSSSQGSGNDDCDALGDVFIWGEGTGEGVLGGGTRRVGSSFDS 292
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+DS LPKALES VVLDVQNIACG RHAALV KQGEVFSWGEE GGRLGHG DSD HPK
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDALSN+NIELVACGEYHTCAVTLSGDLYTWGDGTYN GLLGHG +VSHWVPKRV GPL
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+G+H+SSISCGPWHTA+VTSAG+LFTFGDGTFGVLGHGDR S+SIPREVESLKGLRTVRA
Sbjct: 413 QGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRA 472
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV++GN +S+N SSGKLFTWGDGDKGRLGHGDKEA+LVPTCVAALVEPN
Sbjct: 473 ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPN 532
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALT SGH+YTMGSPVYGQLGNPQADGKLP RVEGKLSKSFVEE+ACG+
Sbjct: 533 FCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGA 592
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHG TDDRN+P+LVEALKDKQVKSIACGTNFTAAICL
Sbjct: 593 YHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICL 652
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNK YRV
Sbjct: 653 HKWVSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKVYRV 711
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNC++KL+K + D SS SS+SRRGSINQG E ++K++KLD + R+QL R S+ESFK
Sbjct: 712 CDNCYHKLKKFIEMDTSSQSSLSRRGSINQGSTEPVNKNDKLDLKPRSQLARLPSVESFK 771
Query: 541 QSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
Q E + SK+NKKLEF+SSRVSPIP+G SQ G+LNISKSFNP+FGSSKKFF+AS+PGSRIV
Sbjct: 772 QVESQFSKKNKKLEFSSSRVSPIPSGGSQRGSLNISKSFNPVFGSSKKFFAASLPGSRIV 831
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSPISRRPSPPRSTTPTPTLGGLTSP+I V+DAK TN+ LSQEVI+LRAQV
Sbjct: 832 SRATSPISRRPSPPRSTTPTPTLGGLTSPRIAVNDAKSTNNRLSQEVIRLRAQV 885
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/654 (84%), Positives = 602/654 (92%), Gaps = 2/654 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK + MDAFRVSLSSAVSSSSQGSG+DD DALGD F GEGTG+GVLGGG RVGS F
Sbjct: 233 MKTVPMDAFRVSLSSAVSSSSQGSGNDDCDALGDXFYLGEGTGEGVLGGGTRRVGSSFDS 292
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+DS LPKALES VVLDVQNIACG RHAALV KQGEVFSWGEE GGRLGHG DSD HPK
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDALSN+NIELVACGEYHTCAVTLSGDLYTWGDGTYN GLLGHG +VSHWVPKRV GPL
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPL 412
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+G+H+SSISCGPWHTA+VTSAG+LFTFGDGTFGVLGHGDR S+SIPREVESLKGLRTVRA
Sbjct: 413 QGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRA 472
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV++GN +S+N SSGKLFTWGDGDKGRLGHGDKEA+LVPTCVAALVEPN
Sbjct: 473 ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPN 532
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALT SGH+YTMGSPVYGQLGNPQADGKLP RVEGKLSKSFVEE+ACG+
Sbjct: 533 FCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGA 592
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHG TDDRN+P+LVEALKDKQVKSIACGTNFTAAICL
Sbjct: 593 YHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICL 652
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGVDQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNK YRV
Sbjct: 653 HKWVSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKVYRV 711
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CDNC++KL K + D SS SS+SRRGSINQG E ++K++KLD + R+QL R S+ESFK
Sbjct: 712 CDNCYHKLXKFIEMDTSSQSSLSRRGSINQGSMEPVNKNDKLDLKPRSQLARLPSVESFK 771
Query: 541 QSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
Q E + SK+NKKLEF+SSRVSPIP+G SQ G+LNISKSFNP+FGSSKKFF+AS+PGSRIV
Sbjct: 772 QVESQFSKKNKKLEFSSSRVSPIPSGGSQRGSLNISKSFNPVFGSSKKFFAASLPGSRIV 831
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSPISRRPSPPRSTTPTPTLGGLTSP+I V+DAK TN+ LSQEVI+LRAQV
Sbjct: 832 SRATSPISRRPSPPRSTTPTPTLGGLTSPRIAVNDAKSTNNRLSQEVIRLRAQV 885
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/653 (84%), Positives = 598/653 (91%), Gaps = 4/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M+ M MDAFRVS+SSAVSSSS GSGHDDGDALGDVFIWGEG G+GVLGGG RVGS F +
Sbjct: 233 MRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDI 292
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALES +VLDVQNIACGG+HA LV KQGE FSWGEES GRLGHGVDS++ PK
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK 352
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDAL+ NIELVACGE+H+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN L
Sbjct: 353 LIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLL 410
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGD+KSV IPREV+SLKGLRTVRA
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRA 470
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDKGRLGHG+KE KLVPTCVAALVEPN
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGN ADGK PNRVEGKL KSFVEEIACG+
Sbjct: 531 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGA 590
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACGTNFTAA+C+
Sbjct: 591 YHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCI 650
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
H+W SG+DQSMCSGCR PF +FKRKRHNCYNCGLVFCHSC+SKKSLKA MAPNPNKPYRV
Sbjct: 651 HRWASGMDQSMCSGCRQPF-SFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRV 709
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKL+KT +TD SSHSS+SRRGSINQG + IDKD+K DSRS QL RFS MES +
Sbjct: 710 CDKCFNKLKKTMETDPSSHSSLSRRGSINQGSDP-IDKDDKFDSRSDGQLARFSLMESMR 768
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q + R K+NKK EFNSSRVSPIP+GSSQ GALNI+KSFNP+FG+SKKFFSASVPGSRIVS
Sbjct: 769 QVDSRHKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVS 828
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTL GL +PK VVDD KRTND+LSQEV+KLR+QV
Sbjct: 829 RATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQV 881
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 1018 bits (2632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/653 (84%), Positives = 599/653 (91%), Gaps = 4/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M+ M +DAFRVS+SSAVSSSS GSGHDDGDALGDVFIWGEG G+GVLGGG RVGS F +
Sbjct: 233 MRGMGIDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDM 292
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALES +VLDVQNIACGG+HA LV KQGE FSWGEES GRLGHGVDS++ PK
Sbjct: 293 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK 352
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDAL+ NIELVACGE+H+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN L
Sbjct: 353 LIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLL 410
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGD+KSV IPREV+SLKGLRTVRA
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRA 470
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDKGRLGHG+KE KLVPTCVAALVEPN
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGN ADGKLPNRVEGKL KSFVEEIACG+
Sbjct: 531 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGA 590
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACGTNFTAA+C+
Sbjct: 591 YHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCI 650
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
H+W SG+DQSMCSGCR PF +FKRKRHNCYNCGLVFCHSC+SKKSLKA MAPNPNKPYRV
Sbjct: 651 HRWASGMDQSMCSGCRQPF-SFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRV 709
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKL+KT +TD SSHSS+SRRGSINQG + IDKD+K DSRS QL RFS MES +
Sbjct: 710 CDKCFNKLKKTMETDPSSHSSLSRRGSINQGSDP-IDKDDKFDSRSDGQLARFSLMESMR 768
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q + R K+NKK EFNSSRVSPIP+GSSQ GALNI+KSFNP+FG+SKKFFSASVPGSRIVS
Sbjct: 769 QVDSRYKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVS 828
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTL GL +PK VVDD KRTND+LSQEV+KLR+QV
Sbjct: 829 RATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQV 881
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/653 (84%), Positives = 598/653 (91%), Gaps = 4/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M+ M MDAFRVS+SSAVSSSS GSGHDDGDALGDVFIWGEG G+GVLGGG RVGS F +
Sbjct: 220 MRGMGMDAFRVSMSSAVSSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDI 279
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALES +VLDVQNIACGG+HA LV KQGE FSWGEES GRLGHGVDS++ PK
Sbjct: 280 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPK 339
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDAL+ NIELVACGE+H+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN L
Sbjct: 340 LIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLL 397
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGD+KSV IPREV+SLKGLRTVRA
Sbjct: 398 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRA 457
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDKGRLGHG+KE KLVPTCVAALVEPN
Sbjct: 458 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 517
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGN ADGK PNRVEGKL KSFVEEIACG+
Sbjct: 518 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGA 577
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACGTNFTAA+C+
Sbjct: 578 YHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCI 637
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
H+W SG+DQSMCSGCR PF +FKRKRHNCYNCGLVFCHSC+SKKSLKA MAPNPNKPYRV
Sbjct: 638 HRWASGMDQSMCSGCRQPF-SFKRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRV 696
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKL+KT +TD SSHSS+SRRGSINQG + IDKD+K DSRS QL RFS MES +
Sbjct: 697 CDKCFNKLKKTMETDPSSHSSLSRRGSINQGSDP-IDKDDKFDSRSDGQLARFSLMESMR 755
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q + R K+NKK EFNSSRVSPIP+GSSQ GALNI+KSFNP+FG+SKKFFSASVPGSRIVS
Sbjct: 756 QVDSRHKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVS 815
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTL GL +PK VVDD KRTND+LSQEV+KLR+QV
Sbjct: 816 RATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQV 868
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/653 (83%), Positives = 595/653 (91%), Gaps = 4/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSA+SSSS GSGHDDGD LGDVF+WGEG G+GVLGGG +RVGS +
Sbjct: 237 MKGMGMDAFRVSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEI 296
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALES +VLDVQNIACGG+HA LV KQGE FSWGEES GRLGHGVDS+V HPK
Sbjct: 297 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK 356
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDAL+ NIELVACGEYH+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN +
Sbjct: 357 LIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLM 414
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGDRKSV IPREV+SLKGLRTVRA
Sbjct: 415 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRA 474
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDK RLGHGDKE KLVPTCVAALVEPN
Sbjct: 475 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 534
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGNP ADGK+P RV+GKL KSFVEEIACG+
Sbjct: 535 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGA 594
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACG+NFTAA+CL
Sbjct: 595 YHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCL 654
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKW SG+DQSMCSGCR PF NFKRKRHNCYNCGLVFCHSCS+KKSLKA MAPNPNKPYRV
Sbjct: 655 HKWASGMDQSMCSGCRQPF-NFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRV 713
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKL+K +TD SSHSS+SRR S+NQG ++ ID+DEKLD+RS QL RFS +E +
Sbjct: 714 CDRCFNKLKKAMETDPSSHSSLSRRESVNQG-SDAIDRDEKLDTRSDGQLARFSLLEPMR 772
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q + RSK+NKK EFNSSRVSPIP+G S G+LNI+KSFNP FGSSKKFFSASVPGSRI S
Sbjct: 773 QVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTFGSSKKFFSASVPGSRIAS 832
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTL GLT+PKIVVDD KR+ND+LSQEV+ LR+QV
Sbjct: 833 RATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDDTKRSNDNLSQEVVMLRSQV 885
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 1013 bits (2620), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/653 (83%), Positives = 595/653 (91%), Gaps = 4/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSA+SSSS GSGHDDGD LGDVF+WGEG G+GVLGGG +RVGS +
Sbjct: 271 MKGMGMDAFRVSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEI 330
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALES +VLDVQNIACGG+HA LV KQGE FSWGEES GRLGHGVDS+V HPK
Sbjct: 331 KMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK 390
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDAL+ NIELVACGEYH+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN +
Sbjct: 391 LIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLM 448
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGDRKSV IPREV+SLKGLRTVRA
Sbjct: 449 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRA 508
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDK RLGHGDKE KLVPTCVAALVEPN
Sbjct: 509 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 568
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGNP ADGK+P RV+GKL KSFVEEIACG+
Sbjct: 569 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGA 628
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACG+NFTAA+CL
Sbjct: 629 YHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCL 688
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKW SG+DQSMCSGCR PF NFKRKRHNCYNCGLVFCHSCS+KKSLKA MAPNPNKPYRV
Sbjct: 689 HKWASGMDQSMCSGCRQPF-NFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRV 747
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKL+K +TD SSHSS+SRR S+NQG ++ ID+DEKLD+RS QL RFS +E +
Sbjct: 748 CDRCFNKLKKAMETDPSSHSSLSRRESVNQG-SDAIDRDEKLDTRSDGQLARFSLLEPMR 806
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q + RSK+NKK EFNSSRVSPIP+G S G+LNI+KSFNP FGSSKKFFSASVPGSRI S
Sbjct: 807 QVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTFGSSKKFFSASVPGSRIAS 866
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTL GLT+PKIVVDD KR+ND+LSQEV+ LR+QV
Sbjct: 867 RATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDDTKRSNDNLSQEVVMLRSQV 919
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/653 (83%), Positives = 593/653 (90%), Gaps = 4/653 (0%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK M MDAFRVSLSSA+SSSS GSGHDDGD LGDVF+WGEG G+GVLGGG RVGS +
Sbjct: 232 MKGMGMDAFRVSLSSAISSSSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNYRVGSSLEI 291
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS LPKALES +VLDVQ IACGG+HA LV KQGE FSWGEES GRLGHGVDS+V HPK
Sbjct: 292 KMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPK 351
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDALS NIELVACGEYH+CAVTLSGDLYTWG G +FG+LGHGNEVSHWVPKRVN +
Sbjct: 352 LIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLM 409
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGHGDRKSV IPREV+SLKGLRTVRA
Sbjct: 410 EGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRA 469
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDK RLGHGDKE KLVPTCVAALVEPN
Sbjct: 470 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 529
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSGHVYTMGSPVYGQLGNP ADGK+P RVEGKL KSFVEEIACG+
Sbjct: 530 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGA 589
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKG+NGRLGHGD DDRNSP+LVE+LKDKQVKSIACG+NFTAA+CL
Sbjct: 590 YHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCL 649
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKW SG+DQSMCSGCR PF NFKRKRHNCYNCGLVFCHSC++KKSLKA MAPNPNKPYRV
Sbjct: 650 HKWASGMDQSMCSGCRQPF-NFKRKRHNCYNCGLVFCHSCTNKKSLKACMAPNPNKPYRV 708
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CFNKL+K +TD SSHSS+SRR S+NQG ++ ID+DEKLD+RS QL RFS +E +
Sbjct: 709 CDRCFNKLKKAMETDPSSHSSLSRRESVNQG-SDAIDRDEKLDTRSDGQLARFSLLEPMR 767
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
Q + RSK+NKK EFNSSRVSPIP+G S G+LNI+KSFNP FGSSKKFFSASVPGSRIVS
Sbjct: 768 QVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNITKSFNPTFGSSKKFFSASVPGSRIVS 827
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRRPSPPRSTTPTPTL GLT+ KIVVDD KRTND+LSQEV+ LR+QV
Sbjct: 828 RATSPISRRPSPPRSTTPTPTLSGLTTQKIVVDDTKRTNDNLSQEVVMLRSQV 880
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 992 bits (2565), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/654 (79%), Positives = 574/654 (87%), Gaps = 8/654 (1%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K M +DAFRVSLSSAVSSSSQGSGHDD DALGDV+IWGEGT G+LGGG+N VG GV
Sbjct: 231 LKGMTVDAFRVSLSSAVSSSSQGSGHDDSDALGDVYIWGEGTAGGILGGGMNGVGG-SGV 289
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ DS +PKALESAV+LDVQ IACG RHAALV KQGEVFSWGEE GGRLGHGVDSDVLHPK
Sbjct: 290 RTDSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPK 349
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+D L N N+ELVACGEYH+CAVTLSGDLYTWG ++N GLLG+ NE S+WVPK++NGPL
Sbjct: 350 LVDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPL 409
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHV+++SCGPWHTAVVTS+GQLFTFGDGTFGVLGHGDR+SVS PREVESLKGLRTVRA
Sbjct: 410 EGIHVAAVSCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRA 469
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDKGRLGHGDKE++LVPTCVAALVEPN
Sbjct: 470 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPN 529
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHS+TVALTT+GHVYTMGSPVYGQLGNPQADGKLP RVEGKLSK+FVEE+ CG+
Sbjct: 530 FCQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGA 589
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHGDTDDR+SP++VEALKDKQVKS+ CGT+FTAAICL
Sbjct: 590 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAICL 649
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG+DQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCS+KKSLKASMAPNPNKPYRV
Sbjct: 650 HKWVSGIDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSNKKSLKASMAPNPNKPYRV 708
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CF KLR+ + D S HS++SRRGSINQ E + E ++RSR QL R +S+E K
Sbjct: 709 CDQCFGKLRRATEIDSSYHSALSRRGSINQRLIE-AENSEYPNTRSRIQLGRNNSIEMSK 767
Query: 541 QSEGRS-KRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
E S KRNKKL N S+VS N SSQ A N SKS FGSSKKFFSAS+PGSRI+
Sbjct: 768 DVESESLKRNKKLSLNGSQVSLSANDSSQRNAFNTSKS----FGSSKKFFSASLPGSRIM 823
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSP SRR SPPR+TTPTP L P+IVVDD K+ ND LS+EV+KLR+QV
Sbjct: 824 SRATSPTSRRSSPPRATTPTPILSVRALPRIVVDDTKKLNDGLSEEVVKLRSQV 877
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/653 (80%), Positives = 584/653 (89%), Gaps = 11/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MD FRVSLSSAVSSSS GSGHDDGDALGDVF+WGEGTG+G+LGGG +R G+ G K
Sbjct: 237 RGLPMDNFRVSLSSAVSSSSHGSGHDDGDALGDVFMWGEGTGEGILGGGNSRFGNSSGAK 296
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD LPK LE A LDVQNI+CGGRHA LV KQGEV+SWGEESGGRLGHGVD DV PKL
Sbjct: 297 MDCLLPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKL 356
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
++AL++MNIELVACGEYHTCAVTLSGDLYTWG+GT+NFGLLGHGNEVSHW+PKR+NGPLE
Sbjct: 357 VEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLE 416
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTAVVTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 476
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSS+SNCSSGK+FTWGDGDKGRLGHGDK+ +LVPTCVA+LVEPNF
Sbjct: 477 CGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNF 536
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH TVALTTSGHVYTMGS VYGQLGNPQADG +P RVEGKL K+FVEEI+CG+Y
Sbjct: 537 CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAY 596
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDDRNSP+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIH 656
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCRLPF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APNPNKPYRVC
Sbjct: 657 KWVSGVDQSMCSGCRLPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 715
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
DNC+ KL K +TD S ++RG++ QG N+ I +E+L++RS QL+R SSMESFK
Sbjct: 716 DNCYCKLNKGPETD---RYSSAKRGAVLQGFNDPI--NEELETRSNVQLSRLSSMESFKN 770
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNSSRVSPIPNGSS W LNISKS FGSSKKFFSASVPGSRIVS
Sbjct: 771 MDSRYSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKS----FGSSKKFFSASVPGSRIVS 826
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP++VVD AK D L+QEVI LR+QV
Sbjct: 827 RATSPVSRRSSPPRSTTPTPTLGGLTSPRVVVDGAKPMKDGLNQEVINLRSQV 879
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/653 (80%), Positives = 589/653 (90%), Gaps = 13/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVSLSSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVG+ GV
Sbjct: 236 RGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVN 295
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHA LV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 296 MDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKL 355
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL+NMNIELVACGEYHTCAVTLSGDLYTWG+GT N GLLGHGNEVSHWVPKRVNGPLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVS+ISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+ +LVPTCVAALVEPNF
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNF 535
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C++ACGH +TVALTTSGHVYTMGSPVYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 536 CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAY 595
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDDR+SP+LVEALKDKQV+++ CG NFTAAIC+H
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIH 655
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCRLPF N +RKRHNCYNC LVFCH+CSSKKSLKAS+APNPNKPYRVC
Sbjct: 656 KWVSGVDQSMCSGCRLPF-NLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVC 714
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD S ++RGS+ QG N+ + DE+L+++S AQL+R SS+ESFK
Sbjct: 715 DSCYSKLNKGPETD---RYSSAKRGSVIQGFNDSV--DEELETKSNAQLSRLSSLESFKH 769
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNSSRVSPIPNGSS W LNISKS FGSSKKFFSASVPGSRIVS
Sbjct: 770 MDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKS----FGSSKKFFSASVPGSRIVS 825
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP++V D + NDS+SQEV+ LR+QV
Sbjct: 826 RATSPVSRRASPPRSTTPTPTLGGLTSPRVV--DGVKPNDSISQEVLSLRSQV 876
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 979 bits (2531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/653 (80%), Positives = 589/653 (90%), Gaps = 13/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVSLSSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVG+ GV
Sbjct: 282 RGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVN 341
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHA LV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 342 MDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKL 401
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL+NMNIELVACGEYHTCAVTLSGDLYTWG+GT N GLLGHGNEVSHWVPKRVNGPLE
Sbjct: 402 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 461
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVS+ISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 462 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 521
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+ +LVPTCVAALVEPNF
Sbjct: 522 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNF 581
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C++ACGH +TVALTTSGHVYTMGSPVYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 582 CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAY 641
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDDR+SP+LVEALKDKQV+++ CG NFTAAIC+H
Sbjct: 642 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIH 701
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCRLPF N +RKRHNCYNC LVFCH+CSSKKSLKAS+APNPNKPYRVC
Sbjct: 702 KWVSGVDQSMCSGCRLPF-NLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVC 760
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD S ++RGS+ QG N+ + DE+L+++S AQL+R SS+ESFK
Sbjct: 761 DSCYSKLNKGPETD---RYSSAKRGSVIQGFNDSV--DEELETKSNAQLSRLSSLESFKH 815
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNSSRVSPIPNGSS W LNISKS FGSSKKFFSASVPGSRIVS
Sbjct: 816 MDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKS----FGSSKKFFSASVPGSRIVS 871
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP++V D + NDS+SQEV+ LR+QV
Sbjct: 872 RATSPVSRRASPPRSTTPTPTLGGLTSPRVV--DGVKPNDSISQEVLSLRSQV 922
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 979 bits (2531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/653 (81%), Positives = 588/653 (90%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVS SSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS G K
Sbjct: 36 RGVPMDAFRVSYSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAK 95
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 96 MDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKL 155
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDALS+MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN+VSHWVPK VNGPLE
Sbjct: 156 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLE 215
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 216 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 275
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVM GNSSSSNCSSGK+FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF
Sbjct: 276 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 335
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGN QADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 336 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAY 395
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDD+N+P+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 396 HVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIH 455
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APN NKPYRVC
Sbjct: 456 KWVSGVDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVC 514
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D C++KL K +TD HSS R ++ G ++ I++D L++RS AQL+R SSMESFK
Sbjct: 515 DTCYSKLTKGPETD--MHSSAKRAATV-PGFSDTIEED--LETRSNAQLSRLSSMESFKH 569
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 570 LDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 629
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRR SPPRSTTPTPTLGGLTSP++V +D K TND+LSQEV+ LR+QV
Sbjct: 630 RATSPISRRASPPRSTTPTPTLGGLTSPRVVPNDGKPTNDALSQEVLNLRSQV 682
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 979 bits (2530), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/653 (77%), Positives = 564/653 (86%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K D FRVSLSSAVSSSSQGSG D+ DALGDV+IWGEGTGDG+LGGG++R+G GV+
Sbjct: 232 KVTNTDNFRVSLSSAVSSSSQGSGRDENDALGDVYIWGEGTGDGILGGGVHRIGGS-GVQ 290
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MDS +PKALESAV+LDVQ IACG +HAALV KQGEVFSWGEE GGRLGHGVDSDV HPK
Sbjct: 291 MDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKF 350
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+D L N N+ELVACGEYH+CAVTLSGDLY WG YNFGLLG G+E + WVP++++GPLE
Sbjct: 351 VDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLE 410
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSS+SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR SVSIPREVESLKGLRT+RAA
Sbjct: 411 GIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAA 470
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVE+MVG+S+SSNCSSGKLFTWGDGDK RLGHGDKEA+LVPTCVA LVEPNF
Sbjct: 471 CGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNF 530
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGHSLT ALTT+G VYTMGSPVYGQLGNPQADG LP RVEGKL K+FVEE+ACG+Y
Sbjct: 531 CQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAY 590
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGD DDRNSPS+VEALKDKQVK I CGT+FTAAICLH
Sbjct: 591 HVAVLTSRTEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAICLH 650
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG+DQSMCSGC LPF NFKRKRHNCYNCGLVFCHSCS+KKSLKASMAPNPNKPYRVC
Sbjct: 651 KWVSGIDQSMCSGCHLPF-NFKRKRHNCYNCGLVFCHSCSNKKSLKASMAPNPNKPYRVC 709
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
DNC +KLR++ +TD S HS++SRRGS+NQG NE +K E +S+S A+L R SMES K+
Sbjct: 710 DNCLSKLRRSSETDSSVHSALSRRGSVNQGLNEVAEKTENSNSKSHAKLGRNFSMESSKE 769
Query: 542 SEG-RSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
E S+RN+K NS +VSP N S+ N SKS FGSSKKFFSAS+PGSRIVS
Sbjct: 770 VESISSRRNRKSNSNSIQVSPSGNDVSRRNTFNNSKS----FGSSKKFFSASLPGSRIVS 825
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP SRR SPPR+ TPTPTL PK+ VD A R NDSL +E++KLRAQV
Sbjct: 826 RATSPTSRRSSPPRAATPTPTLSANELPKLAVDGAGRLNDSLREEIVKLRAQV 878
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/653 (80%), Positives = 590/653 (90%), Gaps = 14/653 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVSLSSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVG+ GVK
Sbjct: 282 RGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNS-GVK 340
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHA LV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 341 MDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKL 400
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL+NMNIELVACGEYHTCAVTLSGDLYTWG+GT N GLLGHGNEVSHWVPKRVNGPLE
Sbjct: 401 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 460
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVS+ISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 461 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 520
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+ +LVPTCVAALVEPNF
Sbjct: 521 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNF 580
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C++ACGH +TVALTTSGHVYTMGSPVYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 581 CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAY 640
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDDR+SP+LVE+LKDKQV+++ CG NFTAAIC+H
Sbjct: 641 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVESLKDKQVRTVVCGINFTAAICIH 700
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCRLPF N +RKRHNCYNC LVFCH+CSSKKSLKAS+APNPNKPYRVC
Sbjct: 701 KWVSGVDQSMCSGCRLPF-NLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVC 759
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD S ++RGS+ QG N+ + DE+L+++S AQL+R SS+ESFK
Sbjct: 760 DSCYSKLNKGPETD---RYSSAKRGSVIQGFNDSV--DEELETKSNAQLSRLSSLESFKH 814
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNSSRVSPIPNGSS W LNISKS FGSSKKFFSASVPGSRIVS
Sbjct: 815 MDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKS----FGSSKKFFSASVPGSRIVS 870
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP++V D + NDS+SQEV+ LR+QV
Sbjct: 871 RATSPVSRRASPPRSTTPTPTLGGLTSPRVV--DGVKPNDSISQEVLSLRSQV 921
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/653 (80%), Positives = 589/653 (90%), Gaps = 13/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVSLSSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVG+ GV
Sbjct: 236 RGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVN 295
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHA LV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 296 MDCLIPKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKL 355
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL+NMNIELVACGEYHTCAVTLSGDLYTWG+GT N GLLGHGNEVSHWVPKRVNGPLE
Sbjct: 356 IDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLE 415
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVS+ISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 416 GIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAA 475
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+ +LVPTCVAALVEPNF
Sbjct: 476 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNF 535
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C++ACGH +TVALTTSGHVYTMGSPVYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 536 CQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAY 595
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDDR+SP+LVEALKDKQV+++ CG NFTAAIC+H
Sbjct: 596 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIH 655
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCRLPF N +RKRHNCYNC LVFCH+CSSKKSLKAS+APNPNKPYRVC
Sbjct: 656 KWVSGVDQSMCSGCRLPF-NLRRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVC 714
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD S ++RGS+ QG N+ + DE+L+++S AQL+R SS+ESFK
Sbjct: 715 DSCYSKLNKGPETD---RYSSAKRGSVIQGFNDSV--DEELETKSNAQLSRLSSLESFKH 769
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNSSRVSPIPNGSS W LNISKS FGSSKKFFSASVPGSRIVS
Sbjct: 770 MDSRTSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKS----FGSSKKFFSASVPGSRIVS 825
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP++V D + NDS+SQEV+ LR+QV
Sbjct: 826 RATSPVSRRASPPRSTTPTPTLGGLTSPRVV--DGVKPNDSISQEVLSLRSQV 876
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/653 (80%), Positives = 589/653 (90%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVS SSA+SSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS K
Sbjct: 237 RGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAK 296
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 297 MDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKL 356
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
ID+L++MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN+VSHWVPKRV+GPLE
Sbjct: 357 IDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLE 416
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR S+S+PREVESLKGLRTVRAA
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+++ VPTCVAALVEPNF
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNF 536
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAY 596
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHG TDD+N+P+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIH 656
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APNPNKPYRVC
Sbjct: 657 KWVSGSDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 715
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD +S ++RG++ QG +E +E+L++RS QL+R SSMESFK
Sbjct: 716 DSCYSKLTKGLETDTNSS---TKRGTVVQGFSE--TNEEELETRSNTQLSRLSSMESFKN 770
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 771 MDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 830
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP+++ +DAK TNDSLS EV+ LR+QV
Sbjct: 831 RATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVLNLRSQV 883
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 975 bits (2520), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/653 (80%), Positives = 589/653 (90%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVS SSA+SSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS K
Sbjct: 237 RGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAK 296
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 297 MDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKL 356
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
ID+L++MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN+VSHWVPKRV+GPLE
Sbjct: 357 IDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLE 416
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR S+S+PREVESLKGLRTVRAA
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+++ VPTCVAALVEPNF
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNF 536
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAY 596
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHG TDD+N+P+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIH 656
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APNPNKPYRVC
Sbjct: 657 KWVSGSDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 715
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD +S ++RG++ QG +E +E+L++RS QL+R SSMESFK
Sbjct: 716 DSCYSKLTKGLETDTNSS---TKRGTVVQGFSE--TNEEELETRSNTQLSRLSSMESFKN 770
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 771 MDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 830
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP+++ +DAK TNDSLS EV+ LR+QV
Sbjct: 831 RATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVLNLRSQV 883
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/653 (80%), Positives = 589/653 (90%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVS SSA+SSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS K
Sbjct: 237 RGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAK 296
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 297 MDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKL 356
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
ID+L++MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN+VSHWVPKRV+GPLE
Sbjct: 357 IDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLE 416
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR S+S+PREVESLKGLRTVRAA
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+++ VPTCVAALVEPNF
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNF 536
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAY 596
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHG TDD+N+P+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIH 656
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APNPNKPYRVC
Sbjct: 657 KWVSGSDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 715
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD +S ++RG++ QG +E +E+L++RS QL+R SSMESFK
Sbjct: 716 DSCYSKLTKGLETDTNSS---TKRGTVVQGFSE--TNEEELETRSNTQLSRLSSMESFKN 770
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 771 MDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 830
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP+++ +DAK TNDSLS EV+ LR+QV
Sbjct: 831 RATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVLNLRSQV 883
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/653 (81%), Positives = 580/653 (88%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFR S SSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS G K
Sbjct: 275 RGVPMDAFRASYSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAK 334
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 335 MDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKL 394
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDALS+MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN++SHWVPK VNGPLE
Sbjct: 395 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGPLE 454
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTAVVTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 455 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 514
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVM GNSSSSNCSSGK+FTWGDGDKGRLGHGDK KLVPTCVAALVEPNF
Sbjct: 515 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEPNF 574
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGN QADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 575 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAY 634
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTSKTEVYTWGKGANGRLGHGDTDD+N+P+LVEALKDKQV+ + CG NFTAAIC+H
Sbjct: 635 HVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVVCGINFTAAICIH 694
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APN NKPYRVC
Sbjct: 695 KWVSGVDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVC 753
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D C++KL K +TD HSS R ++ P +E L++RS AQL+R SSMESFK
Sbjct: 754 DTCYSKLTKGLETD--MHSSAKRAATV---PGVSDANEEDLETRSNAQLSRLSSMESFKH 808
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 809 LDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 868
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRR SPPRSTTPTPTLGGLTSP++V +D K TND+LSQEV+ LR+QV
Sbjct: 869 RATSPISRRASPPRSTTPTPTLGGLTSPRVVPNDGKPTNDALSQEVLNLRSQV 921
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/653 (80%), Positives = 588/653 (90%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVS SSA+SSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS K
Sbjct: 237 RGIPMDAFRVSYSSAISSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAK 296
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQGE++SWGEESGGRLGHGVD DV PKL
Sbjct: 297 MDYLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKL 356
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
ID+L++MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN+VSHWVPKRV+GPLE
Sbjct: 357 IDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLE 416
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR S+S+PREVESLKGLRTVRAA
Sbjct: 417 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAA 476
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDK+++ VPTCVAALVEPNF
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNF 536
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 537 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAY 596
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHG TDD+N+P+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIH 656
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APNPNKPYRVC
Sbjct: 657 KWVSGSDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 715
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD +S ++RG++ QG +E +E+L++RS QL R SSMESFK
Sbjct: 716 DSCYSKLTKGLETDTNSS---TKRGTVVQGFSE--TNEEELETRSNTQLLRLSSMESFKN 770
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 771 MDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 830
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP+++ +DAK TNDSLS EV+ LR+QV
Sbjct: 831 RATSPVSRRTSPPRSTTPTPTLGGLTSPRVIANDAKPTNDSLSHEVLNLRSQV 883
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/653 (81%), Positives = 584/653 (89%), Gaps = 11/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVSLSSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +R+GS G K
Sbjct: 237 RGIPMDAFRVSLSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGNSRLGSSSGAK 296
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE A LDVQNI+CGGRHA LV KQGEV+SWGEESGGRLGHGVD DV PKL
Sbjct: 297 MDCLVPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKL 356
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL++MNIELVACGEYHTCAVTLSGDLYTWG+GT+NFGL GHGNEVSHW+PKR+NGPLE
Sbjct: 357 IDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLE 416
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTAVVTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 417 GIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAA 476
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVGNSSSSNCSSGK+FTWGDGDKGRLGHGDKE +LVPTCVA+LVEPNF
Sbjct: 477 CGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPNF 536
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH TVALTTSGHVYTMGS VYGQLGNPQADG +P RVEGKL K+FVEEI+CG+Y
Sbjct: 537 CQVACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAY 596
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDTDDRNSP+LVEALKDKQV+S+ CG NFTAAIC+H
Sbjct: 597 HVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIH 656
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCRLPF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APNPNKPYRVC
Sbjct: 657 KWVSGVDQSMCSGCRLPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVC 715
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C+ KL K +TD S ++RG+I QG N+ I+ D L++RS QL+R SSMESFK
Sbjct: 716 DSCYGKLNKGPETD---RYSSAKRGAILQGFNDSINDD--LETRSNVQLSRLSSMESFKN 770
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNSSRVSPIPNGSS W LNISKS FGSSKKFFSASVPGSRI S
Sbjct: 771 MDSRYSKKNKKFEFNSSRVSPIPNGSSHWSGLNISKS----FGSSKKFFSASVPGSRIAS 826
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRR SPPRSTTPTPTLGGLTSP++VVD A+ D+LSQEV+ LR+QV
Sbjct: 827 RATSPVSRRTSPPRSTTPTPTLGGLTSPRVVVDGARPIKDNLSQEVVHLRSQV 879
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/653 (77%), Positives = 590/653 (90%), Gaps = 7/653 (1%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MD FR S SSAVSSSS GSG+DDGDALGDV IWGEGTG+G+LGGG +R+GS G K
Sbjct: 239 RGIQMDPFRASYSSAVSSSSYGSGYDDGDALGDVLIWGEGTGEGILGGGSSRIGSSSGAK 298
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGG+HAALV+KQGE++SWGEESGGRLGHGVD DV HPKL
Sbjct: 299 MDCLVPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKL 358
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL++MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN++SHWVPK+++GPLE
Sbjct: 359 IDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLE 418
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGP+HT +VTSAGQLFTFGDG+FGVLGHGDR+S+S+P+EVESLKGLRTVRAA
Sbjct: 419 GIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAA 478
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVM GNSSSSNCSSGK+FTWGDGDKGRLGHGDKE++LVPTCVAALVEPNF
Sbjct: 479 CGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNF 538
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGNPQADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 539 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLPARVEGKLHKNFVEEISCGAY 598
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHG+TDD+N+P+LVEALKDKQV+++ CGTNFTAAIC+H
Sbjct: 599 HVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAICIH 658
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KW+SGVDQSMCSGCR PF N +RKRHNCYNC L+FCHSCSSKKSLKAS+APNP+KPYRVC
Sbjct: 659 KWISGVDQSMCSGCRQPF-NLRRKRHNCYNCALIFCHSCSSKKSLKASLAPNPSKPYRVC 717
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL K +TD S ++RG++ QG ++ +D+D ++RS AQL+R SS++SFK
Sbjct: 718 DSCYSKLTKGLETD---MYSSAKRGAVVQGFSDTVDED--TETRSNAQLSRMSSIDSFKH 772
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNG S W LNIS+SFNP+FGSSKKFFSASVPGSRI+S
Sbjct: 773 MDSRYSKKNKKFEFNSTRVSPVPNGGSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIIS 832
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSP+SRRPSP RSTTPTPT GGLTSP++VV+ AK TNDS +QE++ LR+QV
Sbjct: 833 RATSPVSRRPSPTRSTTPTPTFGGLTSPRVVVNGAKPTNDSQTQEILNLRSQV 885
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/654 (77%), Positives = 560/654 (85%), Gaps = 7/654 (1%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK +AFRVSLSSAVSSSSQGSG DD DALGDV+IWGEGTG+G+LGGG+++ G +
Sbjct: 197 MKNTNTEAFRVSLSSAVSSSSQGSGRDDNDALGDVYIWGEGTGEGILGGGVHKSGGS-DI 255
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+MDS +PKALESAV+LDVQ IACG +HAALV KQGEVFSWGEE GGRLGHGVDSDV HPK
Sbjct: 256 QMDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPK 315
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+D L N N+ELVACGEY +CAVTLSGDLY WG YNFGLLG G+E + WVP++++GPL
Sbjct: 316 FVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPL 375
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGIHVSS+SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR SVS PREVESLKGLRT+R
Sbjct: 376 EGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRV 435
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG+SSSSNCSSGKLFTWGDGDKGRLGHGDKEA+LVPT VA LVEP+
Sbjct: 436 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPS 495
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
FC+VACGHSLTVALTTSG VYTMGSPVYGQLGNPQADGK+P RVEGKL K+FVEE+ACG+
Sbjct: 496 FCQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGA 555
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+TEVYTWGKGANGRLGHGDTDDRN PS+VEALKDKQVK I CGT+FTAAICL
Sbjct: 556 YHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAICL 615
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG+DQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV
Sbjct: 616 HKWVSGIDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 674
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD CF+K+R++ TD S HS++ RRGS NQG NE +K E ++RS A+L R SMES K
Sbjct: 675 CDYCFSKIRRSTGTDSSVHSTLRRRGSENQGLNEITEKSENSNTRSHAKLGRNFSMESSK 734
Query: 541 QSE-GRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
+ E S+RN+K S++VSP SQ A N SKS FGSSKKFFSASVPGSRIV
Sbjct: 735 EVESISSRRNRKSSSISTQVSPSAYDVSQRNAFNNSKS----FGSSKKFFSASVPGSRIV 790
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSP SRR SPPR+TTPTP L PK+ VD R NDSL +EV+KLRAQV
Sbjct: 791 SRATSPTSRRSSPPRATTPTPALSVHELPKVAVDGTGRLNDSLREEVVKLRAQV 844
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/653 (77%), Positives = 561/653 (85%), Gaps = 32/653 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ + MDAFRVS SSAVSSSS GSGHDDGDALGDVFIWGEGTG+G+LGGG +RVGS G K
Sbjct: 133 RGVPMDAFRVSYSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAK 192
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
MD +PK LE AV LDVQNI+CGGRHAALV KQ KL
Sbjct: 193 MDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQA------------------------KL 228
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDALS+MNIELVACGEYHTCAVTLSGDLYTWGDGT+ FGLLGHGN+VSHWVPK VNGPLE
Sbjct: 229 IDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLE 288
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GIHVSSISCGPWHTA+VTSAGQLFTFGDG+FGVLGHGDR+S+S+PREVESLKGLRTVRAA
Sbjct: 289 GIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTVRAA 348
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVM NS+SSNCSSGK+FTWGDGDKGRLGHGDKE KLVPTCVAALVEPNF
Sbjct: 349 CGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPNF 408
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
C+VACGH LTVALTTSGHVYTMGS VYGQLGN QADG LP RVEGKL K+FVEEI+CG+Y
Sbjct: 409 CQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNFVEEISCGAY 468
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+TEVYTWGKGANGRLGHGDT+D+N+P+LVEALKDKQV+++ CG NFTAAIC+H
Sbjct: 469 HVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAICIH 528
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSGVDQSMCSGCR PF N +RKRHNCYNC LVFCHSCSSKKSLKAS+APN NKPYRVC
Sbjct: 529 KWVSGVDQSMCSGCRQPF-NLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNGNKPYRVC 587
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D C++KL K +TD H S R ++ G ++ I++D L++RS AQL+R SSMESFK
Sbjct: 588 DTCYSKLTKGLETD--MHFSAKRAATV-PGFSDTIEED--LETRSNAQLSRLSSMESFKH 642
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ R SK+NKK EFNS+RVSP+PNGSS W LNIS+SFNP+FGSSKKFFSASVPGSRIVS
Sbjct: 643 LDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVS 702
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RATSPISRR SPPRSTTPTPTLGGLTSP+ V D K TND+LSQEV+ LR+QV
Sbjct: 703 RATSPISRRTSPPRSTTPTPTLGGLTSPR-VPTDGKPTNDALSQEVLNLRSQV 754
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/656 (67%), Positives = 530/656 (80%), Gaps = 6/656 (0%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ A + FRVSLSSAVSSSSQGSGHDD DALGDVF+WGEG GDG++G G++RVGS K
Sbjct: 218 RTSASENFRVSLSSAVSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTK 277
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+D+ LPKALES VVLDV +IACGG+HA LV K+GEVFSWGEE G RLGHGV+ DV HPKL
Sbjct: 278 IDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKL 337
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL MNIELVACGEYH+CAVTLSGDLYTWGDGT+N GLLGHG+E SHW+PK+V+GP+E
Sbjct: 338 IDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPME 397
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+HVS ++CGPWHTAVVTSAGQLFTFGDGTFG LGHGD S+SIPREVE+L+G RT+R A
Sbjct: 398 GMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVA 457
Query: 242 CGVWHTAAVVEVMVG---NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
CGVWHTAAVVE+M+ SS + SSGKLFTWGDGDKGRLGHGDKE +LVP V AL+
Sbjct: 458 CGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALIN 517
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
+FC+VACGH+L+VALTTSG VYTMGS VYGQLG+P ADGK+P VEGK++ SFVEE+AC
Sbjct: 518 ESFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVAC 577
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GSYHVAVLTSKTEVYTWGKG NG+LGHGD D RN+P+LV+ LKDKQVK++ CG NFTAAI
Sbjct: 578 GSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAI 637
Query: 419 CLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPY 478
LHKWVS D S+CSGC F F+RKRHNCYNCGLVFC++CSS+KSLKAS+APN NKPY
Sbjct: 638 SLHKWVSCADHSICSGCHNQF-GFRRKRHNCYNCGLVFCNTCSSRKSLKASLAPNMNKPY 696
Query: 479 RVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMES 538
RVCD+CF KL+K ++ +R +I Q NE ++D + R + QL+R SS++S
Sbjct: 697 RVCDDCFTKLKKAMESGSVLRIPKARSSNILQKSNEIAERD-TMGPRVQGQLSRLSSVDS 755
Query: 539 FKQSEGRSKR-NKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR 597
F ++E + + + KLEFN +RVSP NG+ Q G+ + SK N +FG S+K FSAS PGSR
Sbjct: 756 FSRAESKHYKCDTKLEFNDARVSPHLNGNVQRGSFHSSKLSNSLFGGSRKIFSASRPGSR 815
Query: 598 IVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
IVSRATSP+S + SPP+S +L + SP+ DD K TNDSLS+E+I LRAQV
Sbjct: 816 IVSRATSPVSGKSSPPQSAMLAASLAVVRSPEATDDDPKHTNDSLSREIINLRAQV 871
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/663 (66%), Positives = 520/663 (78%), Gaps = 43/663 (6%)
Query: 4 MAMDA-FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGE--GTGDGVLGGGLNRVGSCFGV 60
+ +DA FRVS+SSAVSSSSQGSG ++GDALGDVF+WGE G+GDG G+
Sbjct: 245 IPLDANFRVSMSSAVSSSSQGSGQEEGDALGDVFLWGESVGSGDG-------------GI 291
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K DS LPKALESAVVLDV +IACG RHAALV KQGEVF WG+ESGGRLGHGVD DV HPK
Sbjct: 292 KTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPK 351
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++AL+ N E VACGEYH+CAVTLSGDL+TWGDGT+++GLLGHGN++SHW PKRV GPL
Sbjct: 352 LVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPL 411
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EGI VSS++CG WHTA+VTSAGQLFTFGDGTFGVLGHGD++SV++P+EVESLKGL+TVR
Sbjct: 412 EGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLKTVRV 471
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEVMVG S++ SSGKLFTWGDGDKGRLGHGDKE KLVPTCVAALV+ N
Sbjct: 472 ACGVWHTAAVVEVMVGYSNAGG-SSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYN 530
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F +VACGH+LTVALT +G V+TMGS +YGQLG+ +ADGKLP VEG+L ++FVEEIACG+
Sbjct: 531 FKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEIACGA 590
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLT+KTEVYTWGKGANGRLGHGD DRN+P+LVEALK+KQVKS+ACG+ FTAAICL
Sbjct: 591 YHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTAAICL 650
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR PF F RKRHNCYNCG FCHSCS++K+LKAS+APNP KPYRV
Sbjct: 651 HKWVSGADQSLCSGCRQPF-GFTRKRHNCYNCGHAFCHSCSARKALKASLAPNPAKPYRV 709
Query: 481 CDNCFNKLRK---TFDTDGSSHSSVSRRGSI-NQGPNEFIDKDEKLDSRSRAQLTRFSSM 536
CD CF KL+K G + V R+ + QG + K KL+ + Q +
Sbjct: 710 CDPCFVKLKKGGEVLLPGGGGGAGVPRKSMVATQGQQGSVKKPRKLELQPEQQQQQQQQQ 769
Query: 537 ESFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMF----GSS-KKFFSA 591
+ N+ L+F+SS V P WGA++I FNP GSS + SA
Sbjct: 770 PQY-------HLNQALQFSSS-VQP-------WGAVDIPSVFNPYASGGSGSSLRPLVSA 814
Query: 592 -SVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLR 650
SVP SR+ SR+ SP+SRRPSPPRS TPTPTL GL +PK +VD+ KR ND ++ EV+KL+
Sbjct: 815 LSVPTSRVASRSVSPLSRRPSPPRSATPTPTLAGLATPKTLVDELKRENDVVNHEVVKLK 874
Query: 651 AQV 653
QV
Sbjct: 875 EQV 877
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/648 (67%), Positives = 520/648 (80%), Gaps = 24/648 (3%)
Query: 25 GHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACG 84
G +ALGDV++WGEG GDG+LGGG R+G+ + +D+ LPKALESA+VLDVQ +ACG
Sbjct: 258 GSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVACG 317
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G+HAALV KQGEVF+WGEESGGRLGHGVD DV HP+L++AL++ E+VACGEYH CAVT
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
LSGDLYTWGDGT++ GLLGHGN++SHW+PKRVNGPLE + V+SI+CGPWHTAVVT+AGQL
Sbjct: 378 LSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAGQL 437
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
FTFGDGTFGVLGH DR+S PREVESLKGLRTVRAACGVWHTAAVVEVMVG+SS+S+CS
Sbjct: 438 FTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCS 497
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SGKLFTWGDGDKGRLGHGDKE +LVPTCVAALV+ NF +VACGHSLTVALTT G V+TMG
Sbjct: 498 SGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMG 557
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S ++GQLG+PQADGKLP VEG+L ++VE+IACG++HVA +T K+EVYTWGKGANGRLG
Sbjct: 558 SSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLG 617
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
HGD +DRN+P+LVEALK+KQVKSIACG FTAA+CLHKW+SG DQ+ CSGCR PF +F R
Sbjct: 618 HGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQNACSGCRQPF-SFTR 676
Query: 445 KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSR 504
KRHNCYNCGLVFCH+CSSKK+LKAS+APNP KPYRVCD C KLRK + + +S+S+
Sbjct: 677 KRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRKASEGGVGAGASLSK 736
Query: 505 RGSINQ----------GPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGR--SKRNKKL 552
RG+ ++ G EF + + R +T +E K EG+ KR KK
Sbjct: 737 RGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPIT----LEFGKAGEGKLGMKRGKKP 792
Query: 553 EFNSSRVSPIPNGS---SQWGALNISKSFN-PMFGSSKK---FFSASVPGSRIVSRATSP 605
E +SSRVSP+PNG+ S WGA+++ F+ P F S S+SV R VSRA SP
Sbjct: 793 ENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPLAISSSVVSGRAVSRAVSP 852
Query: 606 ISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+SRR SPPRSTTPTPT GL PK VV+D K+TND+LS E I+LR+QV
Sbjct: 853 LSRRTSPPRSTTPTPTGSGLAIPKTVVEDLKKTNDTLSDENIQLRSQV 900
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 807 bits (2085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/648 (66%), Positives = 519/648 (80%), Gaps = 24/648 (3%)
Query: 25 GHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACG 84
G +ALGDV++WGEG GDG+LGGG R+G+ + +D+ LPKALESA+VLDVQ +ACG
Sbjct: 258 GSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYVACG 317
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G+HAALV KQGEVF+WGEESGGRLGHGVD DV HP+L++AL++ E+VACGEYH CAVT
Sbjct: 318 GKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVT 377
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
LSGDLYTWGDGT++ GLLGHGN++SHW+PKRVNGPLE + V+SI+CGPWHTAVVT+AGQL
Sbjct: 378 LSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEEVRVASIACGPWHTAVVTTAGQL 437
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
FTFGDGTFGVLGH DR+S PREVESLKGLRTVRAACGVWHTAAVVEVMVG+SS+S+CS
Sbjct: 438 FTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCS 497
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SGKLFTWGDGDKGRLGHGDKE +LVPTCVAALV+ NF +VACGHSLTVALTT G V+TMG
Sbjct: 498 SGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMG 557
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S ++GQLG+PQADGKLP VEG+L ++VE+IACG++HVA +T K+EVYTWGKGANGRLG
Sbjct: 558 SSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGANGRLG 617
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
HGD +DRN+P+LVEALK+KQVKSIACG FTAA+CLHKW+SG DQ+ CSGCR PF +F R
Sbjct: 618 HGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHKWLSGADQNACSGCRQPF-SFTR 676
Query: 445 KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSR 504
KRHNCYNCGLVFCH+CSSKK+LKAS+APNP KPYRVCD C KLRK + + +S+S+
Sbjct: 677 KRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDPCCVKLRKASEGGVGAGASLSK 736
Query: 505 RGSINQ----------GPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGR--SKRNKKL 552
RG+ ++ G EF + + R +T +E K EG+ KR KK
Sbjct: 737 RGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPIT----LEFGKAGEGKLGMKRGKKP 792
Query: 553 EFNSSRVSPIPNGS---SQWGALNISKSFN-PMFGSSKK---FFSASVPGSRIVSRATSP 605
E +SSRVSP+PNG+ S WGA+++ F+ P F S S+SV R VSRA SP
Sbjct: 793 ENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPLAISSSVVSGRAVSRAVSP 852
Query: 606 ISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+SRR SPPRSTTPTPT GL PK VV+D K+TND+LS E I+LR+ +
Sbjct: 853 LSRRTSPPRSTTPTPTGSGLAIPKTVVEDLKKTNDTLSCENIQLRSHI 900
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/671 (66%), Positives = 532/671 (79%), Gaps = 29/671 (4%)
Query: 7 DAFRVSLSSAVSSSSQGSGH-DDG----DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
D +R+S+SSAVSSSSQ S H +DG + LGDV++WGEG GDG+LGGG++R+GS +
Sbjct: 238 DNYRISMSSAVSSSSQSSQHGEDGLHYAEPLGDVYMWGEGVGDGILGGGIHRIGSGGAIN 297
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+D+ LPK LESA+VLDVQ IACGG+HAALV KQGEVF+WGEESGGRLGHGVD DV HP+L
Sbjct: 298 LDALLPKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQL 357
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
++AL++ E+VACGEYH CAVTLSGDLY+WGDGT+N GLLGHGN++SHW+PKRVNGPLE
Sbjct: 358 VEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPLE 417
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+SI+CGPWHTA+VT+ G LFTFGDGTFGVLGH DRKS PREVESLKGLRTVRAA
Sbjct: 418 GLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRAA 477
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEVMVG+SS+ +CSSGKLFTWGDG+KGRLGHGDKE +LVPTCVAALV+ NF
Sbjct: 478 CGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNF 537
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+VACG+SLTVALTT G V+TMGS YGQLG+PQADGKLP VEGKL +++VE+IACG++
Sbjct: 538 RQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKLPGLVEGKLVEAYVEDIACGAH 597
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLT +EVYTWGKGANGRLGHGD +DRN+P+LVEALK+KQVKSIACG FTAAICLH
Sbjct: 598 HVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAICLH 657
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KW+SG DQ+ CSGC+ PF F RKRHNCYNCGLV+CH+CSSKK+LKAS+APNP KP+RVC
Sbjct: 658 KWLSGADQNACSGCKQPF-GFTRKRHNCYNCGLVYCHACSSKKALKASLAPNPGKPFRVC 716
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQ----------GPNEFIDKDEKLDSRSRAQLT 531
D CF KLRK + +++S+R N+ G EF + + R +T
Sbjct: 717 DPCFLKLRKAGEGGLGGVAALSKRSVPNRNRGVEVKDGSGKGEFRAPRPQGPNTGRPPIT 776
Query: 532 RFSSMESFKQSEGRS--KRNKKLEFNSSRVSPIPNGSSQ---WGALNISKSFN-PMFGSS 585
+E K EG+S KR KK E +SSR+SP PNG S WGA+++ F+ P F +
Sbjct: 777 ----LEFGKVGEGKSGTKRGKKPENSSSRISPAPNGVSSGATWGAVSVPAGFSKPPFQTG 832
Query: 586 KK---FFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSL 642
S+S R VSRA SP+SRR SPPRSTTPTPT GL PK VV+D K+TND+L
Sbjct: 833 LNGPVAVSSSAVAGRAVSRAVSPLSRRSSPPRSTTPTPTGSGLVIPKTVVEDLKKTNDAL 892
Query: 643 SQEVIKLRAQV 653
S E I+LR+QV
Sbjct: 893 SDENIQLRSQV 903
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/631 (61%), Positives = 476/631 (75%), Gaps = 38/631 (6%)
Query: 25 GHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACG 84
G ++GD G++++WGEG GDG G ++ + F + D+ LP+A+ S VVLDVQ IACG
Sbjct: 77 GQEEGDVFGELWMWGEGIGDG---GVTKKLDTSF--RTDAFLPRAVRSLVVLDVQQIACG 131
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
RH ALV +QGEVFSWGEESGGRLGHGVD+DV HP+LID+L++ ++ VACGEYH+CAVT
Sbjct: 132 VRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVT 191
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
SGDLYTWGDGT+NFGLLGHGN +SHW PKRV GPLEG+ VSS++CGPWHT +VTS GQL
Sbjct: 192 QSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQL 251
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
F+FGDGTFGVLGHGDRKS S+PREVESLKGL+T+RAACG WHTAAVVEVM S++ +
Sbjct: 252 FSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSL 311
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SGKLFTWGDGDK RLGHGDKE KLVPTCVAALV+ NF +VACGHSLTVALTT+GH+YTMG
Sbjct: 312 SGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMG 371
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S YGQLG+PQA G+LP + +L ++ +EE++CG+YHVA LTSK +V TWGKGANGRLG
Sbjct: 372 SVSYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLG 429
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV--DQSMCSGCRLPFNNF 442
HGD +DR+ P+LVEAL+DKQVK ++CG++FT+AICLHK GV SMCSGCR PF F
Sbjct: 430 HGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGNSMCSGCRQPF-GF 488
Query: 443 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSV 502
RK+HNCYNCGL +CHSCSSKK+L AS APNP K +RVCD CF K+ S SSV
Sbjct: 489 TRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKM---------SRSSV 539
Query: 503 SRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPI 562
S F+ K D FKQ++ ++ + K ++SRVSP+
Sbjct: 540 SVTAPKENSETRFLKVQTKGD--------------LFKQTDVKTTKRSKRPDSTSRVSPM 585
Query: 563 PNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 622
PNG QWG +N +FN ++K S+P SR+ SRA SP+SRRPSPPRS TP PT+
Sbjct: 586 PNGLLQWGGVNAPAAFNAFLDAAK-----SIPQSRVGSRAVSPLSRRPSPPRSATPIPTV 640
Query: 623 GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
GGLTSPK V+ K N+SL E+ +L+AQV
Sbjct: 641 GGLTSPKHEVEGVKLKNESLILEISRLKAQV 671
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/658 (61%), Positives = 493/658 (74%), Gaps = 21/658 (3%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K DAFRVS+SSA S+SS GS DD DALGDV+IWGE D + G ++ +
Sbjct: 205 VKGSGSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVIYDNAVKIGADKNANYVST 264
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES VVLDV +IACG RHAALV +QGEVF+WGEESGGRLGHGV DV+ P+
Sbjct: 265 RADVLLPRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPR 324
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++L+ ++ VACGE+HTCAVT++G++YTWGDGT+N GLLGHGN+VSHW+PKR++GPL
Sbjct: 325 LVESLAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPL 384
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+S++CGPWHTA+VTS GQLFTFGDGTFGVLGHGDR++V+ PREVESL GLRT+ A
Sbjct: 385 EGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAA 444
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+V SSS+ SSGKLFTWGDGDK RLGHGDKE +L PTCV AL++ N
Sbjct: 445 ACGVWHTAAVVEVIV-TQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYN 503
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSGHV+ MGS VYGQLGNP ADGKLP VE KLS VEEIACG+
Sbjct: 504 FHKIACGHSLTVGLTTSGHVFAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEEIACGA 563
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+ EVYTWGKGANGRLGHGD +DR +P LVEALKD+ VK IACG N+TAAICL
Sbjct: 564 YHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTAAICL 623
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HK VSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+ +A++APNP KPYRV
Sbjct: 624 HKLVSGAEQSQCSSCRQAF-GFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPGKPYRV 682
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+CF KL K +D S+H +RR S+ + E D+ +K + R ++ T S+M+ K
Sbjct: 683 CDSCFVKLNKV--SDASNH---NRRNSVPRLSGENKDRLDKAEIR-LSKSTLPSNMDLIK 736
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPG----- 595
Q + ++ + K S V SSQ +L + SS A VP
Sbjct: 737 QLDTKAAKQGKKADTFSLVR-----SSQAPSL---LQLKDVVFSSAIDLRAKVPKPVLTP 788
Query: 596 SRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S + SR+ SP SRRPSPPRS TP PT GL+ K V D ++TN+ L+QEVIKLRAQV
Sbjct: 789 SGVNSRSVSPFSRRPSPPRSATPVPTTSGLSFSKSVTDSLRKTNELLNQEVIKLRAQV 846
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/631 (61%), Positives = 475/631 (75%), Gaps = 38/631 (6%)
Query: 25 GHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACG 84
G ++GD G++++WGEG GDG L+ + D+ LP+A+ S VVLDVQ IACG
Sbjct: 77 GQEEGDVFGELWMWGEGIGDGGGTKKLD-----TSFRTDAFLPRAVRSLVVLDVQQIACG 131
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
RHAALV +QGEVFSWGEESGGRLGHGVD+DV HP+LID+L++ ++ VACGEYH+CAVT
Sbjct: 132 VRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVT 191
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
SGDLYTWGDGT+NFGLLGHGN +SHW PKRV GPLEG+ VSS++CGPWHT +VTS GQL
Sbjct: 192 QSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQL 251
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
F+FGDGTFGVLGHGDRKS S+PREVESLKGL+T+RAACG WHTAAVVEVM S++ +
Sbjct: 252 FSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSL 311
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SGKLFTWGDGDK RLGHGDKE KLVPTCVAALV+ NF +VACGHSLTVALTT+GH+YTMG
Sbjct: 312 SGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMG 371
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S YGQLG+PQA G+LP + +L ++ +EE++CG+YHVA LTSK +V TWGKGANGRLG
Sbjct: 372 SVSYGQLGDPQATGRLPGVL--RLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLG 429
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV--DQSMCSGCRLPFNNF 442
HGD +DR+ PSLVEAL+DKQVK ++CG++FT+AICLHK GV SMCSGCR PF F
Sbjct: 430 HGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTGNSMCSGCRQPF-GF 488
Query: 443 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSV 502
RK+HNCYNCGL +CHSCSSKK+L AS APNP K +RVCD CF K+ S SSV
Sbjct: 489 TRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKM---------SRSSV 539
Query: 503 SRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPI 562
S F+ K D FKQ++ ++ + K ++SRVSP+
Sbjct: 540 SVTAPKENSETRFLKVQTKGD--------------LFKQTDVKTTKRSKRPDSTSRVSPM 585
Query: 563 PNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 622
PNG QWG +N +FN ++K S+P SR+ SRA SP+SRRPSPPRS TP PT+
Sbjct: 586 PNGLLQWGGVNAPAAFNAFLDAAK-----SIPQSRVGSRAVSPLSRRPSPPRSATPIPTV 640
Query: 623 GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
GGLTSPK V++ K N+SL E+ +L+AQV
Sbjct: 641 GGLTSPKHEVEEVKLKNESLILEISRLKAQV 671
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/659 (59%), Positives = 493/659 (74%), Gaps = 22/659 (3%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K + D FRVS+SSA S+SS GS DD DALGDV+IWGE + V+ G + S F
Sbjct: 204 VKGSSSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSP 263
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES VVLDV IACG +HAALV +QGE+F+WGEESGGRLGHGV +V+ P+
Sbjct: 264 RTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPR 323
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++A+++ ++ VACGE+HTCAVT++G+LYTWGDGT+N GLLGHG +VSHW+PKR+ GPL
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 383
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+ ++CGPWHTA++TS GQLFTFGDGTFGVLGHGDR++VS PREVESL GLRT+
Sbjct: 384 EGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAV 443
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+V SS+S SS KLFTWGDGDK RLGHGDK+A+L PTCV+ L++ N
Sbjct: 444 ACGVWHTAAVVEVIVTQSSAS-VSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSN 502
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F R+ACGHSLTV LTTSG V+TMGS VYGQLGNPQ+DGK+P V+ KL+ VEEIACG+
Sbjct: 503 FHRIACGHSLTVGLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEEIACGA 562
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSK EVYTWGKGANGRLGHGD +DR +P+LVEALKD+ VK IACG+N++AAICL
Sbjct: 563 YHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICL 622
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+AS+APNP KPYRV
Sbjct: 623 HKWVSGAEQSQCSACRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRASLAPNPGKPYRV 681
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF---SSME 537
CD+CF KL K ++ + +RR ++ + E D+ EK S +LT+ S+M+
Sbjct: 682 CDSCFVKLIKVAESGNN-----NRRNAMPRLSGENKDRLEK----SELRLTKTAVPSNMD 732
Query: 538 SFKQSEGRSKRNKKLE---FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVP 594
KQ + ++ + + F+ R S P Q + +S + + + + +
Sbjct: 733 LIKQLDSKAAAKQGKKADTFSLVRTSQ-PQSLLQLKDVVLSTAIDLKRTAPRPVLTP--- 788
Query: 595 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S + SR+ SP SRRPSPPRS TP PT GL+ K + D K+TN+ L+QEV+KLR QV
Sbjct: 789 -SGVSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQV 846
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/657 (59%), Positives = 494/657 (75%), Gaps = 19/657 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K + D FRVS+SSA S+SS GS DD DALGDV+IWGE + V+ G + S F
Sbjct: 204 VKGSSSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSP 263
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES VVLDV IACG +HAALV +QGE+F+WGEESGGRLGHGV +V+ P+
Sbjct: 264 RTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPR 323
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++A+++ ++ VACGE+HTCAVT++G+LYTWGDGT+N GLLGHG +VSHW+PKR+ GPL
Sbjct: 324 LVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 383
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+ ++CGPWHTA++TS GQLFTFGDGTFGVLGHGDR++VS PREVESL GLRT+
Sbjct: 384 EGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAV 443
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAA++EV+V SS+S SSGKLFTWGDGDK RLGHGDK+A+L PTCV +L+E N
Sbjct: 444 ACGVWHTAAIIEVIVTQSSAS-VSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDN 502
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F R+ACGHSLTV LTTSG V+TMGS VYGQLGNPQ+DGKLP VE K + VEEIACG+
Sbjct: 503 FHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEEIACGA 562
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSK EV+TWGKGANGRLGHGD +DR SP+LVEALKD+ VK IACG+N+++AICL
Sbjct: 563 YHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAICL 622
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+A++APNP KPYRV
Sbjct: 623 HKWVSGAEQSQCSACRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRV 681
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF---SSME 537
CD+CF KL K + + +RR ++ + E D+ EK + R LT+ S+M+
Sbjct: 682 CDSCFVKLNKVAELGNN-----NRRNAMPRLSGENKDRLEKPELR----LTKTAVPSNMD 732
Query: 538 SFKQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGS 596
KQ + + +K+ KK + S + P Q + +S + + + + ++S
Sbjct: 733 LIKQLDSKAAKQGKKADTFSLVRTSQPQSLLQLKDVVLSTAIDLKRTAPRPVLTSSG--- 789
Query: 597 RIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ SR+ SP SRRPSPPRS TP PT GL+ K + D K+TN+ L+QEV+KLR QV
Sbjct: 790 -VSSRSVSPFSRRPSPPRSATPIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQV 845
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/656 (59%), Positives = 489/656 (74%), Gaps = 20/656 (3%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K DAFRVS+SSA S+SS GS DD DALGDV+IWGE D ++ G ++ + +
Sbjct: 206 KGSGSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVICDNLVKVGADKNANYLTTR 265
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES VVLDV +IACG RHAALV +QGE+F+WGEESGGRLGHGV DV+ P+L
Sbjct: 266 ADLLLPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRL 325
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ +++ VACGE+HTCAVT++G+L+TWGDGT+N GLLGHG +VSHW+PKR++GPLE
Sbjct: 326 VESLAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLE 385
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+S++CGPWHTA+VT+ QLFTFGDGTFGVLGHGD+ +V+ PREVESL GLRT+ A
Sbjct: 386 GLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVA 445
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEV+V SS+S SSGKLFTWGDGDK RLGHGDKE +L PTCV AL+E NF
Sbjct: 446 CGVWHTAAVVEVIVTQSSAS-VSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNF 504
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+VACGHSLTV LTTSG V TMGS VYGQLGNPQ+DGKLP VE KL VEEIACG+Y
Sbjct: 505 QKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAY 564
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS+ EVYTWGKGANGRLGHGD +DR +P+LVE LKD+ VK IACG+N+TAAICLH
Sbjct: 565 HVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLH 624
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+A++APNP KPYRVC
Sbjct: 625 KWVSGAEQSQCSTCRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVC 683
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESFK 540
D+C+ KL K + ++ +RR ++ + E D+ +K + R S++ + S+++ K
Sbjct: 684 DSCYTKLNKVLEA-----AANNRRTTVPRLSGENKDRLDKAEIRLSKSAMP--SNLDLIK 736
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVP---GSR 597
Q + ++ + K S V P SQ L + +F + + P S
Sbjct: 737 QLDSKAAKQGKKADTFSLVRP-----SQAPLLQLKDVV--LFSAVDLRRTVPRPILTPSG 789
Query: 598 IVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ SR+ SP SR+PSPPRS TP PT GL+ K + D K+TN+ L+QEV+KLR QV
Sbjct: 790 VSSRSVSPFSRKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQV 845
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/656 (59%), Positives = 494/656 (75%), Gaps = 15/656 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K + D FRVS+SSA S+SS GS DD DALGDV+IWGE + V+ G ++ S
Sbjct: 267 VKGSSSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVISENVVKVGADKNVSYCSP 326
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LPK LES VVLDV IACG +HAALV +QGE+F+WGEESGGRLGHGV +V+ P
Sbjct: 327 RTDILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPC 386
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++AL++ ++ VACGE+HTCAVT++G++YTWGDGT+N GLLGHG +VSHW+PKR+ GPL
Sbjct: 387 LVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPL 446
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+ ++CGPWHTA++TS GQLFTFGDGTFGVLGHGDR+++S PREVESL GLRTV
Sbjct: 447 EGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESLSGLRTVSV 506
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAA+VEV+V SS+S SSGKLFTWGDGDK RLGHGDK+A+L PTC++AL++ N
Sbjct: 507 ACGVWHTAAIVEVIVTQSSAS-ISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYN 565
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F R+ACGHSLTV LTTSG V+TMGS VYGQLGNPQ+DGKLP VE KL+ VEEIACG+
Sbjct: 566 FHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKLAGECVEEIACGA 625
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHV VLTS+ EVYTWGKGANGRLGHGD +DR +P+LVEALKD+ VK IACG+N++AAICL
Sbjct: 626 YHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICL 685
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+A++APNP K YRV
Sbjct: 686 HKWVSGAEQSQCSTCRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRV 744
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD C+ KL K ++ S +RR ++ + P E D+ EK + R ++ S+M+ K
Sbjct: 745 CDTCYVKLNKVAES-----SINNRRNAMPRFPGENKDRLEKSELR-LSKPAVPSNMDLIK 798
Query: 541 QSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
Q + + +K+ KK + F+ + + P+ Q + +S + + + + S +
Sbjct: 799 QLDSKAAKQGKKADMFSLAHTTQAPS-LLQLKDVVLSTAMDLKRTVPRPVITP----SGV 853
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQVF 654
SR+ SP SRR SPPRS TP PT GL K + D K+TND L+QEV+KLR+QV+
Sbjct: 854 NSRSVSPFSRRSSPPRSATPIPTTSGLAFSKSITDSLKKTNDLLNQEVLKLRSQVY 909
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/657 (59%), Positives = 491/657 (74%), Gaps = 19/657 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K DAFRVS+SSA S+SS GS DD DALGDV++WGE D + G ++ +
Sbjct: 205 VKGSGSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYVWGEIICDNAVKVGADKNATYLST 264
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES VVLDV +IACG RHAA+V +QGEVF+WGEESGGRLGHGV DV+ P+
Sbjct: 265 RADVLLPRPLESNVVLDVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPR 324
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++L+ ++ +ACGE+HTCAVT++G++YTWGDG + GLLGHG ++SHW+PKR++GPL
Sbjct: 325 LVESLAMTTVDFIACGEFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPL 384
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+S++CGPWHTA+VTS GQLFTFGDGTFGVLGHG+R++++ P+EVESL GLRT+
Sbjct: 385 EGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAV 444
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+V SSS+ SSGKLFTWGDGDK RLGHGDKE +L PTCV AL++ N
Sbjct: 445 ACGVWHTAAVVEVIV-TQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFN 503
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSGHV+TMGS VYGQLGNP ADGK+P VE KLS VEEIACG+
Sbjct: 504 FHKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGA 563
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS+ EVYTWGKGANGRLGHGD +DR +P+LVEALKDK VK IACG N++AAICL
Sbjct: 564 YHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSAAICL 623
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+ +A++APNP+KPYRV
Sbjct: 624 HKWVSGSEQSQCSSCRQAF-GFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRV 682
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPN---EFIDKDEKLDSRSRAQLTRFSSME 537
CD+CF KL K D S+ +RR N GP E D+ +K D R ++LT S+++
Sbjct: 683 CDSCFTKLNKVSDA-----SNTNRR---NAGPRLSGENKDRLDKADLR-LSKLTLPSNLD 733
Query: 538 SFKQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGS 596
KQ + + +K+ KK + S S Q + +S + + K + S
Sbjct: 734 LIKQLDSKAAKQGKKADTFSLVWSSQAPSLLQLKDVVLSSTIDLRPKVPKPVLTP----S 789
Query: 597 RIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ SR+ SP SRRPSPPRS TP PT GL+ K + D K+TN+ L+QEV+KLR QV
Sbjct: 790 GVSSRSVSPFSRRPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRTQV 846
>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1042
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/632 (61%), Positives = 471/632 (74%), Gaps = 21/632 (3%)
Query: 26 HDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGG 85
H+D DALGDVF WGEG GDG+LGGG++ G K+D+ LPKALES VVLDV IACGG
Sbjct: 248 HEDFDALGDVFFWGEGVGDGILGGGVHITGITSSPKVDAFLPKALESKVVLDVHYIACGG 307
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
RHA LV K GE+FSWGEESGGRLGHG+ +DV +PKLID L+ MNIELVACGE HTCAVT
Sbjct: 308 RHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVTF 367
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SGDLYTWGDG YN GLLGHG+E SHW+PKR+ G +EGIHVS +SCGPWHTA VTS GQLF
Sbjct: 368 SGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLF 427
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV---GNSSSSN 262
TFGDGTFG LGHGD S ++PREVE+L+GLRT+R +CGVWHTAA VE+ S +
Sbjct: 428 TFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGS 487
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+ GKLFTWG+GD+ RLGHGDKE +L P CV AL + N C+VACGH+LT+ALT +G VYT
Sbjct: 488 STFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTLALTAAGRVYT 547
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
MGS YGQLGNP+A GK+P VEGK++ +EEIACGSYHVAVLTSK EVYTWGKG NG+
Sbjct: 548 MGSTSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWGKGTNGQ 607
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNF 442
LGHGD DRN P++V+ L+DKQV+++ACG+NFTA ICLHKWVS D S+CSGC PF F
Sbjct: 608 LGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAIICLHKWVSSADHSVCSGCHNPF-GF 666
Query: 443 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSV 502
+RKRHNCYNCGLVFC +CSS+KSLKAS+APN NKP+RVCD+CFNKL+K +
Sbjct: 667 RRKRHNCYNCGLVFCKACSSRKSLKASLAPNMNKPHRVCDDCFNKLKKAAEPGTVPRIPK 726
Query: 503 SRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEG-RSKRNKKLEFNSSRVSP 561
SR G++NQ NE D+ E LD + + QL+R S++S Q+E S+R++ E +++RV P
Sbjct: 727 SRAGNLNQKTNEAADR-ETLDPKLQTQLSRLPSLDSASQAESWHSRRDRISESDTTRVFP 785
Query: 562 IPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPT 621
+ G+ Q G SK + + G+S FF GSR+ AT P+ R +PPRS+
Sbjct: 786 VLIGNWQLGHFYSSKGSSFLGGTSTNFFLNPASGSRMPPPATPPLPGRTTPPRSS----- 840
Query: 622 LGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
DD+K NDSLS E+I LRAQV
Sbjct: 841 ----------FDDSKHMNDSLSDEIISLRAQV 862
>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
Length = 953
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/493 (77%), Positives = 411/493 (83%), Gaps = 25/493 (5%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V +I+CG H A+VT G++F++G+ + G LGHG V P+ ++SL AC
Sbjct: 244 LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVAC 303
Query: 243 GVWHTAAVV---------------------EVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
G +HT AV + +++ NCSSGKLFTWGDGDKGRLGH
Sbjct: 304 GEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLGH 363
Query: 282 GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 341
GDKEAKLVPTCVAALV+PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP
Sbjct: 364 GDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 423
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
RVEGKL+KSFVEEIACG+YHVAVLTS+TEVYTWGKGANGRLGHGDTDDRNSP+LVEALK
Sbjct: 424 TRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 483
Query: 402 DKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCS 461
DKQVKSIACGTNFTA ICLHKWVSGVDQSMCSGCRLPF NFKRKRHNCYNCGLVFCHSCS
Sbjct: 484 DKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPF-NFKRKRHNCYNCGLVFCHSCS 542
Query: 462 SKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEK 521
SKKSLKASMAPNPNKPYRVCDNCF+KLRK +TD SS S+VSRRG NQG NE IDKDEK
Sbjct: 543 SKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAVSRRGVTNQGLNELIDKDEK 602
Query: 522 LDSRSRAQLTRFSSMESFKQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNP 580
LDSRSR QL RFSSMES KQ+E R SKRNKKLEFNSSRVSPIPNG SQWG KS NP
Sbjct: 603 LDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNGGSQWGG--ALKSLNP 660
Query: 581 MFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTND 640
+FGSSKKFFSASVPGSRIVSR TSPISRRPSPPR+ TPTPTL GLTSPKIVVDDAKRTND
Sbjct: 661 VFGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTND 720
Query: 641 SLSQEVIKLRAQV 653
SLSQEVIKLR QV
Sbjct: 721 SLSQEVIKLRVQV 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 123/270 (45%), Gaps = 47/270 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH----- 87
G++F WGE +G G LG GV D PK ++S +++ +ACG H
Sbjct: 263 GEIFSWGEESG-GRLG---------HGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVT 312
Query: 88 ----------------------------AALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
AL G++F+WG+ GRLGHG L P
Sbjct: 313 LSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 372
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ AL + N VACG T A+T SG +YT G Y G LG+ + +P RV G
Sbjct: 373 TCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVY--GQLGNP-QADGKLPTRVEGK 429
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L V I+CG +H AV+TS +++T+G G G LGHGD + P VE+LK +
Sbjct: 430 LAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVKS 489
Query: 240 AACGVWHTAAV-VEVMVGNSSSSNCSSGKL 268
ACG TA + + V S CS +L
Sbjct: 490 IACGTNFTATICLHKWVSGVDQSMCSGCRL 519
>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
Length = 1120
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/655 (59%), Positives = 489/655 (74%), Gaps = 16/655 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K A D FRVS+SSA S+SS GS DD DALGDV+IWGE T + V G V +
Sbjct: 204 VKGSASDVFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVTCENVKVGADKNV-NYVSP 262
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES+VVLDV +IACG RHA+LV +QGEVF+WGEESGG LGHGV +V+ P+
Sbjct: 263 RADVLLPRPLESSVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPR 322
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++AL++ ++ VACGE+H+CAVT++G+LYTWGDGT+N GLLGHG++VSHW+PKR+ GPL
Sbjct: 323 LVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPL 382
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ ++ ++CGPWHTA+VTS GQLFTFGDGTFGVLGHGDR++VS PREVESL GLRT+
Sbjct: 383 EGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAV 442
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+ +SS+S SSGKLFTWGDGDK RLGHGDKEA+L PTCVAAL++ N
Sbjct: 443 ACGVWHTAAVVEVIATHSSTS-ISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSN 501
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLT LT SG V+TMGS VYGQLGNPQ+DGK+P V K+++ +EEIACG+
Sbjct: 502 FHKIACGHSLTAGLTKSGRVFTMGSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGA 561
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSK EVYTWGKGANGRLGHGD +DR +P+LVEALKD+ VK IACG+N++AAICL
Sbjct: 562 YHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSAAICL 621
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+A+ APNP KPYRV
Sbjct: 622 HKWVSGAEQSQCSTCRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRV 680
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESF 539
CD+C+ KL K + S +RR ++ + E D+ +K D R S+A + S+M+
Sbjct: 681 CDSCYAKLNKVAEASNS-----NRRNALPRLSGENKDRLDKSDLRLSKAVI--HSNMDLI 733
Query: 540 KQSEGRSKRNKKLEFNSSRVSP-IPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
KQ + ++ + K S V P P Q + +S + + + V S +
Sbjct: 734 KQLDSKAAKQGKKGDTFSLVHPSQPPSLLQLKDVVLSSALD----LRRTVPRPVVAPSGV 789
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SR+ SP SRRPSPPRS TP PT GL K + D K+TN+ L+QEV KL AQV
Sbjct: 790 SSRSVSPFSRRPSPPRSATPIPTTSGLAFSKSISDSLKKTNELLNQEVQKLHAQV 844
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/628 (60%), Positives = 469/628 (74%), Gaps = 17/628 (2%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
DD DALGDV+IWGE D V G + +C G + D +PK LES VVLDV +IACG R
Sbjct: 228 DDCDALGDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVR 287
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
HAALV++QGEVF+WGE SGGRLGHG+ DV P+LI++L+ +++ VACGE+HTCAVT++
Sbjct: 288 HAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMT 347
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G++YTWGDGT+N GLLGHG +VSHW+PKR++GPLEG+ ++S+SCGPWHTA++TS GQLFT
Sbjct: 348 GEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFT 407
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FGDGTFGVLGHGD+++V PREVESL GLRT+ ACGVWH AA+VEV+V S+SS SSG
Sbjct: 408 FGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSS-ISSG 466
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGDK RLGHGDKE++L PTCV+AL++ F RVACGHSLTV LTTSG VYTMGS
Sbjct: 467 KLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGST 526
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
VYGQLGNP ADGKLP VE KL K VEEIACG+YHVAVLTS+ EV+TWGKGANGRLGHG
Sbjct: 527 VYGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 586
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
D +DR +PSLV+ LK++ VK+IACG+NFTAAICLHKWVSG +QS CS CR F F RKR
Sbjct: 587 DIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAF-GFTRKR 645
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRG 506
HNCYNCGLV CHSCSSKKSLKA++APNP KPYRVCD+C++KL K S S+ SR+
Sbjct: 646 HNCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCYSKLSKV-----SEASTDSRKN 700
Query: 507 SINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRN--KKLEFNSSRVSPIPN 564
+ + E D+ +K + R A+ S+++ +Q + R+ R K F+ R S P
Sbjct: 701 IMPRLSGENKDRLDKAEIR-LAKSGIPSNIDLIRQLDSRAARQGKKADTFSLVRTSQTPL 759
Query: 565 GSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGG 624
+ N++ + G K +V S SR+ SP SRR SPPRS TP P G
Sbjct: 760 TQLRDALTNVA---DLRRGPPK----PAVTPSGASSRSVSPFSRRSSPPRSVTPIPLTAG 812
Query: 625 LTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
L + + K+TN+ L+QEV+KLRAQ
Sbjct: 813 LGFSTSIAESLKKTNELLNQEVVKLRAQ 840
>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/658 (58%), Positives = 490/658 (74%), Gaps = 21/658 (3%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K D FRVS+SSA SSSS GS DD DALGDV+IWGE D V+ G+++ S +
Sbjct: 207 KVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTR 266
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D +PK LES +VLDV IACG RHAA V +QGE+F+WGEESGGRLGHG+ DV HP+L
Sbjct: 267 TDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRL 326
Query: 122 IDALS-NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+++L+ +++ VACGE+HTCAVTL+G+LYTWGDGT+N GLLGHG+++SHW+PKR+ G L
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCL 386
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+HV+S++CGPWHTA++TS G+LFTFGDGTFGVLGHGDR++V PREVESL GLRT+
Sbjct: 387 EGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRTIAV 446
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVE++V S+SS+ SSGKLFTWGDGDK RLGHGDK+ +L PTCV AL++ N
Sbjct: 447 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 506
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSG V+TMGS VYGQLGN Q DGKLP VE KL+ FVEEI+CG+
Sbjct: 507 FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGA 566
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVA LTS+ EVYTWGKGANGRLGHGD +DR P+LVEALKD+ VK IACG+N+TAAICL
Sbjct: 567 YHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAICL 626
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CRL F F RKRHNCYNCGLV CHSCSSKK+ +A++AP+ + YRV
Sbjct: 627 HKWVSGAEQSQCSTCRLAF-GFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRV 685
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF--SSMES 538
CD+C+ KL K S + +RR S+ P + ++LD +S +L +F S+M+
Sbjct: 686 CDSCYVKLSKV-----SEINDTNRRNSVV--PRLSGENKDRLD-KSEIRLAKFGTSNMDL 737
Query: 539 FKQSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPG- 595
KQ + + +K+ KK + F+ R S +P+ L + + G ++ P
Sbjct: 738 IKQLDSKAAKQGKKTDTFSLGRNSQLPS------LLQLKDAVQSNIGDMRRATPKLAPAP 791
Query: 596 SRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S I SR+ SP SRR SPPRS TP P+ GL P + D+ K+TN+ L+QE++KLR QV
Sbjct: 792 SGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQV 849
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/655 (58%), Positives = 492/655 (75%), Gaps = 16/655 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K + D RVS+SSA S+SS GS DD DALGDV+IWGE GD ++ G + S +
Sbjct: 206 VKGSSSDVMRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEIVGDNIVKIGAEKNSSYVTL 265
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES +VLD+ +IACG RHAALV +QGEVF+WGEESGGRLGHGV DV+ P+
Sbjct: 266 RTDVLLPRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPR 325
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
++++L+ +I VACGE+HTCAVT++G+LYTWGDGT+N GLLGHG++VSHW+PKRV+GPL
Sbjct: 326 MVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPL 385
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+S++CGPWHTA+VTS GQLFTFGDGTFG LGHGDR+++S P+EVESL GLRT+
Sbjct: 386 EGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAV 445
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+V SSS+ SSGKLFTWGDGDK RLGHGDKE +L PTCV AL++ +
Sbjct: 446 ACGVWHTAAVVEVIV-TQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYD 504
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F +VACGHS+TV LTTSG V++MGS VYGQLGNP ADGK+P VE KL VEE++CG+
Sbjct: 505 FHKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGA 564
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHV VLTSK EVYTWGKGANGRLGHGD +DR +P+LVEALKD+ VK IACG+N+TAAICL
Sbjct: 565 YHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAICL 624
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVS +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+A++APNP K YRV
Sbjct: 625 HKWVSSAEQSQCSACRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRV 683
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+C+ KL K + + +R+ ++ + E D+ +K D + + S+++ K
Sbjct: 684 CDSCYTKLMKAAEAINN-----NRKNAMPRLSGENKDRIDKTDMKISKSVP--SNLDLIK 736
Query: 541 QSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
Q + + +K+ KK + F+ R S P+ Q + +S + + + K +A S +
Sbjct: 737 QLDNKAAKQGKKADTFSLVRSSQAPS-LLQLRDVVLSTAVDLRRTAPKPVLTA----SGV 791
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SR+ SP SR+PSPPRS TP PT GL+ K + D K+TND L+ EV+KLR+QV
Sbjct: 792 SSRSVSPFSRKPSPPRSATPVPTASGLSFSKSITDSLKKTNDLLNHEVLKLRSQV 846
>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
Length = 1103
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/661 (58%), Positives = 493/661 (74%), Gaps = 27/661 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K D FRVS+SSA SSSS GS DD DALGDV+IWGE D V+ G+++ S +
Sbjct: 207 KVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTR 266
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D +PK LES +VLDV IACG RHAA V +QGE+F+WGEESGGRLGHG+ DV HP+L
Sbjct: 267 TDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRL 326
Query: 122 IDALS-NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+++L+ +++ VACGE+HTCAVTL+G+LYTWGDGT+N GLLGHG+++SHW+PKR+ G L
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSL 386
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+HV+S+SCGPWHTA++TS G+LFTFGDGTFGVLGHGD+++V PREVESL GLRT+
Sbjct: 387 EGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAV 446
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVE++V S+SS+ SSGKLFTWGDGDK RLGHGDK+ +L PTCV AL++ N
Sbjct: 447 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 506
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSG V+TMGS VYGQLGN Q DGKLP VE KL+ FVEEI+CG+
Sbjct: 507 FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGA 566
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVA LTS+ EVYTWGKGANGRLGHGD +DR P++VEALKD+ VK IACG+N+TAAICL
Sbjct: 567 YHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICL 626
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CRL F F RKRHNCYNCGLV CHSCSSKK+ +A++AP+ + YRV
Sbjct: 627 HKWVSGAEQSQCSTCRLAF-GFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRV 685
Query: 481 CDNCFNKLRKTFDTDGSS--HSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF--SSM 536
CD+C+ KL K + + ++ +S+V R N+ ++LD +S +L +F S+M
Sbjct: 686 CDSCYVKLSKVSEINDTNRRNSAVPRLSGENR---------DRLD-KSEIRLAKFGTSNM 735
Query: 537 ESFKQSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFS--AS 592
+ KQ + + +K+ KK + F+ R S +P+ L + + G ++ A
Sbjct: 736 DLIKQLDSKAAKQGKKTDTFSLGRNSQLPS------LLQLKDAVQSNIGDMRRATPKLAQ 789
Query: 593 VPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
P S I SR+ SP SRR SPPRS TP P+ GL P + D+ K+TN+ L+QE++KLR Q
Sbjct: 790 AP-SGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQ 848
Query: 653 V 653
V
Sbjct: 849 V 849
>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1103
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/661 (58%), Positives = 493/661 (74%), Gaps = 27/661 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K D FRVS+SSA SSSS GS DD DALGDV+IWGE D V+ G+++ S +
Sbjct: 207 KVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTR 266
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D +PK LES +VLDV IACG RHAA V +QGE+F+WGEESGGRLGHG+ DV HP+L
Sbjct: 267 TDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRL 326
Query: 122 IDALS-NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+++L+ +++ VACGE+HTCAVTL+G+LYTWGDGT+N GLLGHG+++SHW+PKR+ G L
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSL 386
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+HV+S+SCGPWHTA++TS G+LFTFGDGTFGVLGHGD+++V PREVESL GLRT+
Sbjct: 387 EGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAV 446
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVE++V S+SS+ SSGKLFTWGDGDK RLGHGDK+ +L PTCV AL++ N
Sbjct: 447 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 506
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSG V+TMGS VYGQLGN Q DGKLP VE KL+ FVEEI+CG+
Sbjct: 507 FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGA 566
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVA LTS+ EVYTWGKGANGRLGHGD +DR P++VEALKD+ VK IACG+N+TAAICL
Sbjct: 567 YHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICL 626
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CRL F F RKRHNCYNCGLV CHSCSSKK+ +A++AP+ + YRV
Sbjct: 627 HKWVSGAEQSQCSTCRLAF-GFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRV 685
Query: 481 CDNCFNKLRKTFDTDGSS--HSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF--SSM 536
CD+C+ KL K + + ++ +S+V R N+ ++LD +S +L +F S+M
Sbjct: 686 CDSCYVKLSKVSEINDTNRRNSAVPRLSGENR---------DRLD-KSEIRLAKFGTSNM 735
Query: 537 ESFKQSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFS--AS 592
+ KQ + + +K+ KK + F+ R S +P+ L + + G ++ A
Sbjct: 736 DLIKQLDSKAAKQGKKTDTFSLGRNSQLPS------LLQLKDAVQSNIGDMRRATPKLAQ 789
Query: 593 VPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
P S I SR+ SP SRR SPPRS TP P+ GL P + D+ K+TN+ L+QE++KLR Q
Sbjct: 790 AP-SGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQ 848
Query: 653 V 653
V
Sbjct: 849 V 849
>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
motifs [Arabidopsis thaliana]
Length = 1108
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/661 (58%), Positives = 493/661 (74%), Gaps = 27/661 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K D FRVS+SSA SSSS GS DD DALGDV+IWGE D V+ G+++ S +
Sbjct: 212 KVSGSDGFRVSVSSAQSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTR 271
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D +PK LES +VLDV IACG RHAA V +QGE+F+WGEESGGRLGHG+ DV HP+L
Sbjct: 272 TDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRL 331
Query: 122 IDALS-NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+++L+ +++ VACGE+HTCAVTL+G+LYTWGDGT+N GLLGHG+++SHW+PKR+ G L
Sbjct: 332 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSL 391
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+HV+S+SCGPWHTA++TS G+LFTFGDGTFGVLGHGD+++V PREVESL GLRT+
Sbjct: 392 EGLHVASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAV 451
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVE++V S+SS+ SSGKLFTWGDGDK RLGHGDK+ +L PTCV AL++ N
Sbjct: 452 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 511
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSG V+TMGS VYGQLGN Q DGKLP VE KL+ FVEEI+CG+
Sbjct: 512 FHKIACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGA 571
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVA LTS+ EVYTWGKGANGRLGHGD +DR P++VEALKD+ VK IACG+N+TAAICL
Sbjct: 572 YHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICL 631
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CRL F F RKRHNCYNCGLV CHSCSSKK+ +A++AP+ + YRV
Sbjct: 632 HKWVSGAEQSQCSTCRLAF-GFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRV 690
Query: 481 CDNCFNKLRKTFDTDGSS--HSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF--SSM 536
CD+C+ KL K + + ++ +S+V R N+ ++LD +S +L +F S+M
Sbjct: 691 CDSCYVKLSKVSEINDTNRRNSAVPRLSGENR---------DRLD-KSEIRLAKFGTSNM 740
Query: 537 ESFKQSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFS--AS 592
+ KQ + + +K+ KK + F+ R S +P+ L + + G ++ A
Sbjct: 741 DLIKQLDSKAAKQGKKTDTFSLGRNSQLPS------LLQLKDAVQSNIGDMRRATPKLAQ 794
Query: 593 VPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
P S I SR+ SP SRR SPPRS TP P+ GL P + D+ K+TN+ L+QE++KLR Q
Sbjct: 795 AP-SGISSRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQ 853
Query: 653 V 653
V
Sbjct: 854 V 854
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/648 (61%), Positives = 484/648 (74%), Gaps = 19/648 (2%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
DAFRVS+SS SSSS GS DD DALGDV+IWGE + V G ++ G + D +
Sbjct: 203 DAFRVSVSSVQSSSSHGSAPDDCDALGDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLI 262
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK LES VVLDV +IACG +HAALV++QGEVF+WGE SGGRLGHG+ DV P+LI++L+
Sbjct: 263 PKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLA 322
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+I+ VACGE+HTCAVT++G++YTWGDGT+N GLLGHG +VSHW+PKR++GPLEG+ ++
Sbjct: 323 ATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIA 382
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
S+SCGPWHTA++TS GQLFTFGDGTFGVLGHGD+++V PREVESL GLRT+ ACGVWH
Sbjct: 383 SVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWH 442
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
AA+VEV+V +SSSS SSGKLFTWGDGDK RLGHGDKE +L PTCV+AL++ F RVAC
Sbjct: 443 AAAIVEVIVTHSSSSV-SSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVAC 501
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
GHSLTV LTTSG VYTMGS VYGQLGNP ADGKLP VE KL+K VEEIACG+YHVAVL
Sbjct: 502 GHSLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVL 561
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
TS+ EV+TWGKGANGRLGHGD +DR +P+LV+ALK++ VK+IACG+NFTAAICLHKWVSG
Sbjct: 562 TSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKWVSG 621
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
+QS CS CR F F RKRHNCYNCGLV CHSCSSKKSLKA++APNP KPYRVCD+C +
Sbjct: 622 TEQSQCSACRQAF-GFTRKRHNCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCHS 680
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRS 546
KL K + + S +V R S G N+ D+ +K + R A+ S+++ KQ + R+
Sbjct: 681 KLSKVSEANIDSRKNVMPRLS---GENK--DRLDKTEIR-LAKSGIPSNIDLIKQLDNRA 734
Query: 547 KRN--KKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATS 604
R K F+ R S P + N++ + G K A P S SR S
Sbjct: 735 ARQGKKADTFSLVRTSQTPLTQLKDALTNVA---DLRRGPPK---PAVTPSS---SRPVS 785
Query: 605 PISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
P SRR SPPRS TP P GL + + K+TN+ L+QEV++LRAQ
Sbjct: 786 PFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEVVRLRAQ 833
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/655 (59%), Positives = 484/655 (73%), Gaps = 16/655 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K A D FRVS+SSA S+SS GS DD DAL DV+IWGE T + V G V + F
Sbjct: 204 VKGSASDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCENVKVGADKNV-NYFSP 262
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES VVLDV +IACG RHA+LV +QGEVF+WGEESGGRLGHGV +V+ P+
Sbjct: 263 RADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPR 322
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++AL + I+ VACGE+H+CAVT++G+LYTWGDG +N GLLGHG+ VSHW+PKR+ GPL
Sbjct: 323 LVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPL 382
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ ++ ++CGPWHTA++TS GQLFTFGDGTFGVLGHGDR++VS PREVESL GLRT+
Sbjct: 383 EGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAV 442
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+ +S +S SSGKLFTWGDGDK RLGHGDKEA+L PTCV+AL++ N
Sbjct: 443 ACGVWHTAAVVEVIATHSGTS-ISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYN 501
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTTSG V+TMGS VYGQLG+ +DGK+P V K++ +EEIACG+
Sbjct: 502 FHKIACGHSLTVGLTTSGRVFTMGSTVYGQLGSSLSDGKVPCLVGDKIAGESIEEIACGA 561
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSK EVYTWGKGANGRLGHGD +DR +P+LVEALKD+ VK IACG+N++AAICL
Sbjct: 562 YHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSAAICL 621
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSS+K+L+A+ APNP KPYRV
Sbjct: 622 HKWVSGAEQSQCSTCRQAF-GFTRKRHNCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRV 680
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESF 539
CD+C+ KL K + S +RR ++ + E D+ +K D R S+A + S+M+
Sbjct: 681 CDSCYAKLNKVAEACNS-----NRRNALPRLSGENKDRLDKSDLRLSKAVIP--SNMDLI 733
Query: 540 KQSEGRSKRNKKLEFNSSRVSP-IPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
KQ + ++ + K S + P P Q + +S + + + V S +
Sbjct: 734 KQLDSKAAKQGKKGDTFSLIRPSQPPSLLQLKDVVLSTALD----LRRTVPRPVVAPSGV 789
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SR+ SP SRR SPPRS TP PT GL+ K + D K+TN+ L+QEV KL AQV
Sbjct: 790 SSRSVSPFSRRSSPPRSATPIPTTSGLSFSKSISDSLKKTNELLNQEVQKLHAQV 844
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/654 (60%), Positives = 481/654 (73%), Gaps = 68/654 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGS--CFGVKM 62
A + FRVSLSSAVSSSSQGS +D DALGDV+IWGEG GDG+LGGG+N+VGS K+
Sbjct: 217 ASEGFRVSLSSAVSSSSQGSCPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKL 276
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D+ LPKALES VVLDV IACGGRHA LV +QGE+FSWGEESGGRLGHGV++DV HPK+I
Sbjct: 277 DALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKII 336
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
D LS N+ELVACGEYHTCAVTLSGDLYTWGDGT+N+GLLGHG+EVSHW+P++V G +EG
Sbjct: 337 DTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEG 396
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
I VS ISCG WHTAVVTSAGQLFTFGDG+FG LGHGD + + PREVE+L+GLRT + AC
Sbjct: 397 IRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVAC 456
Query: 243 GVWHTAAVVEV---MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
GVWHTAA VE + + +S++ SS KL+TWGDGDKGRLGHGD E +LVP CVAAL+E
Sbjct: 457 GVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEE 516
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
C+VACG+ LTVALTT+G VYTMGS YGQLG+ A+GKLP VEG+++ SFVEE+ACG
Sbjct: 517 RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACG 576
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
SYHVAVLTSK EVYTWGKG NG+LGHGD + RN+P++V+ LKDKQVK++ACG+ FT IC
Sbjct: 577 SYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVIC 636
Query: 420 LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 479
+HKWVS D S+CSGC PF F+RKRHNCYNCGLVFC +CSSKKSLKAS+APN KPYR
Sbjct: 637 IHKWVSSADHSVCSGCHNPF-GFRRKRHNCYNCGLVFCKACSSKKSLKASLAPNXKKPYR 695
Query: 480 VCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESF 539
VCD+CFNKL+K ++ S ++ +R G+I+ N +DK E + +A L+R SS
Sbjct: 696 VCDDCFNKLKKIMESSSVSQNARARTGNIHYKSNGVMDK-ETWVPKLQATLSRLSS---- 750
Query: 540 KQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
+GA+N ++S + SR+
Sbjct: 751 -----------------------------FGAINNAESMH----------------SRLA 765
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRATSP+ SP RS+ +D+KR ND+L+QE+I LRAQV
Sbjct: 766 SRATSPVLGTSSPIRSSED------------FSEDSKRANDTLTQEIISLRAQV 807
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/653 (60%), Positives = 483/653 (73%), Gaps = 68/653 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGS--CFGVKM 62
A + FRVSLSSAVSSSSQGS +D DALGDV+IWGEG GDG+LGGG+N+VGS K+
Sbjct: 217 ASEGFRVSLSSAVSSSSQGSCPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKL 276
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D+ LPKALES VVLDV IACGGRHA LV +QGE+FSWGEESGGRLGHGV++DV HPK+I
Sbjct: 277 DALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKII 336
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
D LS N+ELVACGEYHTCAVTLSGDLYTWGDGT+N+GLLGHG+EVSHW+P++V+G +EG
Sbjct: 337 DTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEG 396
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
I VS ISCG WHTAVVTSAGQLFTFGDG+FG LGHGD + + PREVE+L+GLRT + AC
Sbjct: 397 IRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVAC 456
Query: 243 GVWHTAAVVEV---MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
GVWHTAA VE + + +S++ SS KL+TWGDGDKGRLGHGD E +LVP CVAAL+E
Sbjct: 457 GVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEE 516
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
C+VACG+ LTVALTT+G VYTMGS YGQLG+ A+GKLP VEG+++ SFVEE+ACG
Sbjct: 517 RICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACG 576
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
SYHVAVLTSK EVYTWGKG NG+LGHGD + RN+P++V+ LKDKQVK++ACG+ FT IC
Sbjct: 577 SYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVIC 636
Query: 420 LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 479
+HKWVS D S+CSGC PF F+RKRHNCYNCGLVFC +CSSKKSLKAS+APN NKPYR
Sbjct: 637 IHKWVSSADHSVCSGCHNPF-GFRRKRHNCYNCGLVFCKACSSKKSLKASLAPNLNKPYR 695
Query: 480 VCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESF 539
VCD+CFNKL+K ++ S ++ +R G+I+ N +DK E + +A L+R SS
Sbjct: 696 VCDDCFNKLKKIMESSSVSQNARARTGNIHYKSNGVMDK-ETWVPKLQATLSRLSS---- 750
Query: 540 KQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
+GA+N ++S + SR+
Sbjct: 751 -----------------------------FGAINNAESMH----------------SRLA 765
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
SRATSP+ SP RS+ + +D+KR ND+L+QE+I LRAQ
Sbjct: 766 SRATSPVLGTSSPIRSS------------EDFSEDSKRANDTLTQEIISLRAQ 806
>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
Length = 991
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 480/649 (73%), Gaps = 56/649 (8%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
DAFRVS+SSAVSSSSQGSG +D DALGDVFIWGEG G+G LGGG+ ++ S G ++DS +
Sbjct: 220 DAFRVSMSSAVSSSSQGSGPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLV 279
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PKAL++AVVLDV +IACG RHAALV KQG+VF WGEE GGRLGHG+D DV P+L+ AL+
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+N ELVACG++HTCAVTLSG+LYTWG + GL+GH N VSHW+PKR++ PLEG+ +S
Sbjct: 340 GVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRIS 399
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
SI+CG WHTA+V+SAGQLFTFGDGTFGVLGHGD+++++IP+EVESLKGL+TVRAACG+WH
Sbjct: 400 SIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWH 459
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAAVVEV+VG SS+++CSSGKLFTWGDGDK RLGHGDKE KLVPTCVAALV+ NF +VAC
Sbjct: 460 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVAC 519
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
GHSLTVALTTSG V+TMGS +YGQLGNP+ADGK+P V+G+L+++FVEEI CG++HVA L
Sbjct: 520 GHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAAL 579
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
+SKTE+YTWGKGANGRLGHGD +DR +P+LVEAL+DKQVK++ACG++FTA ICLHK VS
Sbjct: 580 SSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPVSD 639
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
DQS+CSGC+ F F RKRHNCYNCGL +CHSCSSKK+ +AS+APNP+K YRVC+ C
Sbjct: 640 ADQSVCSGCKQAF-GFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCLA 698
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ--SEG 544
KL + S+ V+R+ + +D R R L R S KQ G
Sbjct: 699 KLER------SASEEVARKSR------------KYMDGRERP-LIRASKPIEMKQVGYYG 739
Query: 545 RSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATS 604
S+ V IP ++P + V
Sbjct: 740 NSRNTDDFAAKHQTVINIPT---------------------------AIPERKAV----- 767
Query: 605 PISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S +PSPPRS TPTPT GL P D+ ++ + QEV+ L+ Q+
Sbjct: 768 --SAKPSPPRSATPTPTSAGLAPPGNGPDELQKKLELSRQEVLHLKTQI 814
>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
Length = 982
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/649 (59%), Positives = 480/649 (73%), Gaps = 56/649 (8%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
DAFRVS+SSAVSSSSQGSG +D DALGDVFIWGEG G+G LGGG+ ++ S G ++DS +
Sbjct: 211 DAFRVSMSSAVSSSSQGSGPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLV 270
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PKAL++AVVLDV +IACG RHAALV KQG+VF WGEE GGRLGHG+D DV P+L+ AL+
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+N ELVACG++HTCAVTLSG+LYTWG + GL+GH N VSHW+PKR++ PLEG+ +S
Sbjct: 331 GVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRIS 390
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
SI+CG WHTA+V+SAGQLFTFGDGTFGVLGHGD+++++IP+EVESLKGL+TVRAACG+WH
Sbjct: 391 SIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWH 450
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAAVVEV+VG SS+++CSSGKLFTWGDGDK RLGHGDKE KLVPTCVAALV+ NF +VAC
Sbjct: 451 TAAVVEVIVGYSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVAC 510
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
GHSLTVALTTSG V+TMGS +YGQLGNP+ADGK+P V+G+L+++FVEEI CG++HVA L
Sbjct: 511 GHSLTVALTTSGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAAL 570
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
+SKTE+YTWGKGANGRLGHGD +DR +P+LVEAL+DKQVK++ACG++FTA ICLHK VS
Sbjct: 571 SSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPVSD 630
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
DQS+CSGC+ F F RKRHNCYNCGL +CHSCSSKK+ +AS+APNP+K YRVC+ C
Sbjct: 631 ADQSVCSGCKQAF-GFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCLA 689
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ--SEG 544
KL + S+ V+R+ + +D R R L R S KQ G
Sbjct: 690 KLER------SASEEVARKSR------------KYMDGRERP-LIRASKPIEMKQVGYYG 730
Query: 545 RSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATS 604
S+ V IP ++P + V
Sbjct: 731 NSRNTDDFAAKHQTVINIPT---------------------------AIPERKAV----- 758
Query: 605 PISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S +PSPPRS TPTPT GL P D+ ++ + QEV+ L+ Q+
Sbjct: 759 --SAKPSPPRSATPTPTSAGLAPPGNGPDELQKKLELSRQEVLHLKTQI 805
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/653 (57%), Positives = 477/653 (73%), Gaps = 15/653 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + D FRVS+SSA SSSS GS DD DALGD+F+WGE D + G +R S +
Sbjct: 203 KGSSSDIFRVSVSSAPSSSSHGSTPDDCDALGDIFVWGEVISDNFMKPGADR-ASNVSSR 261
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLD Q+IACG RH+A+V +QGEVF+WGEE+GGRLG G+ DV P+L
Sbjct: 262 TDVLLPKPLESNIVLDAQHIACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRL 321
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
++AL+ ++LVACGE+HTCAVT+ G+LYTWGDG +N GLLG+G +VSHW+PKR++G LE
Sbjct: 322 VEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILE 381
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+ ++CGPWHTA+++S GQLFTFGDGTFGVLGHGD+KS+S PREV+SL GLRT+ A
Sbjct: 382 GLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVA 441
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEV++ SS+S SGKLFTWGDGDK RLGHGDKE +L PTCV AL++ NF
Sbjct: 442 CGVWHTAAVVEVIMTQSSTS-IPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 500
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
++ACGHS+T+ LTTSG V+T+GS VYGQLGNP ADGK P VE KL EE+ACG+Y
Sbjct: 501 HKIACGHSITIGLTTSGQVFTVGSSVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAY 560
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HV VLTSK EVYTWGKGANGRLGHGD +DR SP+LVE+LKDK VK IACG+N++AAICLH
Sbjct: 561 HVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLH 620
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
K +SG +QS CS CR F F RKRHNCYNCGLV CHSCSSKK+L+A++AP P K YRVC
Sbjct: 621 KSLSGTEQSQCSACRQAF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVC 679
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C+ KL K ++ GS++ R+ ++ + E DK +K D+R T S+M+ KQ
Sbjct: 680 DSCYAKLSKVSES-GSNY----RKNAVPRLSGENRDKLDKSDTRPPK--TALSNMDLIKQ 732
Query: 542 SEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR-IVS 600
+ ++ + K + V P S L + P ++ +P + + S
Sbjct: 733 LDSKAAKQGKRTDTFAVVRPTQAHS----LLQLKDGPIPNTVDIRRLAPKPIPMANGVNS 788
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
R+ SP+SRR SPPRS TP PT GL+ K + D K+TN+ L+QEV+ LRAQV
Sbjct: 789 RSVSPLSRRSSPPRSGTPVPTASGLSFSKGIADSLKKTNELLNQEVLMLRAQV 841
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/668 (55%), Positives = 474/668 (70%), Gaps = 44/668 (6%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ +D FR+S+SS S SSQGSG DD ++LGDV++WGE DGVL G S F +
Sbjct: 195 LRTSGVDGFRISVSSTPSCSSQGSGPDDIESLGDVYVWGEVWCDGVLPDG---SVSPFPI 251
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+D PK+LES VVLDV IACG RH ALV +QGEVF+WGEESGGRLGHG+D+D P
Sbjct: 252 KIDVLTPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 311
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++ L+ N++ VACGEYHTCAV+ SGDL+TWGDGT+N GLLGHG EVSHW+PKRV+GPL
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPL 371
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ TS G+LFTFGDGTFGVLGHGDR+SV PREV+ L GL+T++
Sbjct: 372 EGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKV 431
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAA++EVM + S +N SS KLFTWGDGDK RLGHG KE L+PTCV+AL++ N
Sbjct: 432 ACGVWHTAAIIEVM--SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYN 489
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH++TVALTTSGHV+TMG YGQLGNP +DG+LP V+ KL FVEEI+CG+
Sbjct: 490 FHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGA 549
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS++EV+TWG+GANGRLGHGDT+DR SP+ VEALKD+ VKSI+CG+NFTA+IC+
Sbjct: 550 YHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICI 609
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RV
Sbjct: 610 HKWVSGADQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRV 668
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD C+ KL+ D S +R+ ++ + + + ++ + RS L + F
Sbjct: 669 CDPCYAKLKAAEAGDA---SIFNRKNTVPRRSIDATIRSDRGEVRSARILMSPGPINYF- 724
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPN---------GSSQWGALNISKSFNPMFGSSKKFFSA 591
EF +R+ P P+ G S + S + + + K +A
Sbjct: 725 ------------EFKPARLGPRPDPSPMIQSSQGPSLLKDIAFPSSLSALQNALKPVITA 772
Query: 592 S------VPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQE 645
S P SR SP SRRPSPPRS P + + V+D K+TN+ L+QE
Sbjct: 773 SPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFS-------RSVIDSLKKTNELLNQE 825
Query: 646 VIKLRAQV 653
V KL+ QV
Sbjct: 826 VTKLQNQV 833
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/662 (57%), Positives = 488/662 (73%), Gaps = 17/662 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
++ D FRVSLSSA+SSSSQGS +D D LGDVFIWGEGTG+G+LGGG +R+G G +
Sbjct: 234 RSSTADTFRVSLSSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTR 293
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+D++ PK+LES+VVLDVQNI+CG RHA LV KQGE FSWGEE+GGRLGHG ++DV HPKL
Sbjct: 294 IDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKL 353
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I MN+EL+ACGEYH+CAVT SGDLYTWGDG + GLLGH +E SHW+PK+V G +E
Sbjct: 354 IKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLME 413
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ VS +SCGPWHTA++TSAG+LFTFGDGTFG LGHGDR PREVE+ GL+T++ A
Sbjct: 414 GLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVA 473
Query: 242 CGVWHTAAVVEVMVG-NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CGVWHTAAVVE+M G +S S+ SG LFTWGDGDKG+LGHGD + +L P C+ ALV+ +
Sbjct: 474 CGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKS 533
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F VAC +++TVALTT+G VYTMGS VYGQLG P A+G P VE L S VEEI+CGS
Sbjct: 534 FSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGS 593
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+HVAVLTS+TEVYTWGKG NG+LGHGD +++ +P+LV+ L+DKQVK I CG+NF+AAIC+
Sbjct: 594 HHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAICV 653
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
H W D S+C GCR+PF NF+RKRHNCYNCG VFC +CSSKKSLKAS+AP+ +KPYRV
Sbjct: 654 HNWALSADNSICFGCRIPF-NFRRKRHNCYNCGFVFCKACSSKKSLKASLAPSTSKPYRV 712
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQL-----TRFSS 535
CD+C++KL+K +++ SR + G N E+ D S L +R SS
Sbjct: 713 CDDCYDKLQKAIESE-----PFSRVPKVKAG-NALYKASEQTDKESGFPLLVGHTSRLSS 766
Query: 536 MESFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPG 595
+SF +++GR R + E +R S N + + ++SKS F SK FSAS+P
Sbjct: 767 SDSFNRAQGRISRVDQYE---NRASSFQNENPPRESFSLSKSPISAFRVSKSLFSASLPS 823
Query: 596 SRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQVFA 655
+R+V ++TSP+ + S S P P + + ++VVD+ K NDSLSQEV +L+AQ+ A
Sbjct: 824 TRVVPQSTSPLLGKASALWSAIPAP-YPPVRTAEVVVDNLKPINDSLSQEVKQLKAQLEA 882
Query: 656 FI 657
+
Sbjct: 883 ML 884
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/657 (58%), Positives = 486/657 (73%), Gaps = 17/657 (2%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FRVSLSSA+SSSSQGS +D D LGDVFIWGEGTG+G+LGGG +R+G G ++D++
Sbjct: 239 DTFRVSLSSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRIGKSSGTRIDANT 298
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK+LES+VVLDVQNI+CG RHA LV KQGE FSWGEE+GGRLGHG ++DV HPKLI
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFK 358
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
MN+EL+ACGEYH+CAVT SGDLYTWGDG + GLLGH +E SHW+PK+V G +EG+ VS
Sbjct: 359 GMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRVS 418
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+SCGPWHTA++TSAG+LFTFGDGTFG LGHGDR PREVE+ GL+T++ ACGVWH
Sbjct: 419 HVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNGLKTLKVACGVWH 478
Query: 247 TAAVVEVMVG-NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
TAAVVE+M G +S S+ SG LFTWGDGDKG+LGHGD + +L P C+ ALV+ +F VA
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDKSFSEVA 538
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
C +++TVALTT+G VYTMGS VYGQLG P A+G P VE L S VEEI+CGS+HVAV
Sbjct: 539 CSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAV 598
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
LTS+TEVYTWGKG NG+LGHGD +++ +P+LV+ L+DKQVK I CG+NF+AAIC+H W
Sbjct: 599 LTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSAAICVHNWAL 658
Query: 426 GVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCF 485
D S+C GCR+PF NF+RKRHNCYNCG VFC +CSSKKSLKAS+AP+ +KPYRVCD+C+
Sbjct: 659 SADNSICFGCRIPF-NFRRKRHNCYNCGFVFCKACSSKKSLKASLAPSTSKPYRVCDDCY 717
Query: 486 NKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQL-----TRFSSMESFK 540
+KL+K +++ SR + G N E+ D S L +R SS +SF
Sbjct: 718 DKLQKAIESE-----PFSRVPKVKAG-NALYKASEQTDKESGFPLLVGHTSRLSSSDSFN 771
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+++GR R + E +R S N + + ++SKS F SK FSAS+P +R+V
Sbjct: 772 RAQGRISRVDQYE---NRASSFQNENPPRESFSLSKSPISAFRVSKSLFSASLPSTRVVP 828
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQVFAFI 657
++TSP+ + S S P P + + ++VVD+ K NDSLSQEV +L+AQ+ A +
Sbjct: 829 QSTSPLLGKASALWSAIPAP-YPPVRTAEVVVDNLKPINDSLSQEVKQLKAQLEAML 884
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/655 (57%), Positives = 476/655 (72%), Gaps = 15/655 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
MK + D R S+SSA S+SS GS D+ D+LGDV++WGE D + G + V S G
Sbjct: 3 MKGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTG- 61
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
++D LPK LES +VLDV ++ CG +HAALV K GEVF+WGE+SGGRLGHG D + P+
Sbjct: 62 RIDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPR 121
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++L+ N++ VACGE+HTCAVT +G+LYTWGDGTYN GLLGHGN+V HW+PKR++G L
Sbjct: 122 LVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGAL 181
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHGD KSVS PREVESL GL+T+
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAV 241
Query: 241 ACGVWHTAAVVEVMVGNSSSS-NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACGVWHTAA+VEV+V SSSS S+GKLFTWGDGDK RLGHGDKE +L PTCVA L++
Sbjct: 242 ACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
+F RVACGHSLTVALTTSG V +MG+ VYGQLGNP +DG++P VE K+ V +IACG
Sbjct: 302 DFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACG 361
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
SYHVAVLT+++EV+TWGKGANGRLGHGDT+DR P+LVEALKD+ V+ IACG NFTAAIC
Sbjct: 362 SYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAIC 421
Query: 420 LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 479
+KWVSG DQS CS CR PF F RKR NCYNCGLV C+SC+S+K+L+AS+AP+P KPYR
Sbjct: 422 QYKWVSGADQSQCSSCRQPF-GFTRKRRNCYNCGLVHCNSCTSRKALRASLAPSPGKPYR 480
Query: 480 VCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESF 539
VCD+CF KL D + ++ R+ + P E + D K+ +A L S+ME
Sbjct: 481 VCDSCFLKLNNASDPNAANR----RKDPVPYQPVES-NGDAKV---GKASLP--SNMEMI 530
Query: 540 KQSEGRSK-RNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRI 598
+ + ++ + KK + S +P + Q + +S M S+ + S S
Sbjct: 531 RNLDIKAAWQGKKTDGLSFLRNPQVSSLLQLSDIALSGGLG-MNRSAPRAVHISAARSVT 589
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SR+PSPPRSTTP PT GL+ K D+ + N+ L+QEV +LRAQV
Sbjct: 590 TSRAVSPFSRKPSPPRSTTPVPTAHGLSFSKSATDNIVKANELLNQEVERLRAQV 644
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/654 (56%), Positives = 468/654 (71%), Gaps = 23/654 (3%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K +D R S+SSA S+SS GS DD D+LGDV++WGE D + V G K
Sbjct: 4 KGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTG-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG RHA+LV + GEVF+WGE+SGGRLGHG D +HP+L
Sbjct: 63 TDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ NI+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +V HW+P+R++GPLE
Sbjct: 123 VESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ ++ +SCG WHTA++TS GQLFTFGDG+FGVLGHG+ KS+S PREVESL GL+T+ A
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SS++ S+GKLFTWGDGDK RLGHGDKEA+L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSAT-VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
RVACGHSLTV LTTSG V+TMG+ VYGQLGNP +DG+ P VE K++ V +IACGSY
Sbjct: 302 YRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVEDKIASEHVLQIACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS++EV+TWGKGANGRLGHGD +DR P+ VEAL+D+ V+ IACG NFTAAICLH
Sbjct: 361 HVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAICLH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQS CS CR PF F RKRHNCYNCGLV C++C+S+K+L+A++APNP K +RVC
Sbjct: 421 KWVSGADQSQCSSCRQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKLHRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL+ SS + + + G + + K + S + R S++S
Sbjct: 480 DSCYSKLKNA--------SSSASKKDLASGESNGEARVGKSNLSSNMDMIR--SLDSKAA 529
Query: 542 SEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV-- 599
+G K+ L F + P SS +I+ S S + P R V
Sbjct: 530 KQG--KKTDALSFLRN-----PQVSSLLQLRDIAFSGGADLNRSAAPRAVRTPAVRSVAT 582
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SR+ SPPRSTTP PT GL+ K D+ + N+ LSQEV +LRAQV
Sbjct: 583 SRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLVKANELLSQEVERLRAQV 636
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/654 (56%), Positives = 470/654 (71%), Gaps = 15/654 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + D R S+SSA S+SS GS D+ D+LGDV++WGE D + G + V S G +
Sbjct: 4 KGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTVISSTG-R 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG +HAALV K GEVF+WGE+SGGRLGHG D + P+L
Sbjct: 63 TDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ N++ VACGE+HTCAVT +G+LY+WGDGT+N GLLGHGN+V HW+PKRV+G LE
Sbjct: 123 VESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHGD KSVS PREVESL GL+T+ A
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSS-NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CGVWHTAA+VEV+V SSSS S+GKLFTWGDGDK RLGHGDKE +L PTCVA L++ +
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHD 302
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F RVACGHSLTVALTTSG V +MG+ VYGQLGNP +DG++P VE K+ V +IACGS
Sbjct: 303 FYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGS 362
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLT + EV+TWGKGANGRLGHGD +DR P+LVE LKD+ V+ IACG NFTAAIC
Sbjct: 363 YHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTAAICQ 422
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
+KWVSG DQS CS CR PF F RKR NCYNCGLV C++C+S+K+L+A++AP+P KPYRV
Sbjct: 423 YKWVSGADQSQCSSCRQPF-GFTRKRRNCYNCGLVHCNACTSRKALRAALAPSPGKPYRV 481
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+CF KL D + ++ R+ + P E + D K+ +A L S+M+ +
Sbjct: 482 CDSCFLKLNNASDPNAANR----RKDPVPYQPVES-NGDAKV---GKASLP--SNMDMIR 531
Query: 541 QSEGRSKRN-KKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
+ ++ R KK + S +P + Q + +S M S+ + S S
Sbjct: 532 NLDIKAARQGKKTDGLSFLRNPQVSSLLQLSDIALSGGLG-MNRSAPRAVRISAARSVTT 590
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SR+PSPPRSTTP PT GL+ K D+ + ++ L+QEV +LRAQV
Sbjct: 591 SRAVSPFSRKPSPPRSTTPVPTAHGLSLSKSATDNIVKAHELLNQEVERLRAQV 644
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/652 (56%), Positives = 471/652 (72%), Gaps = 23/652 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV----KM 62
D R S+SSA S+SS GS DD D+LGDV++WGE V RVGS + K
Sbjct: 9 DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGE-----VFCENSVRVGSDTIIRSTEKT 63
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D LPK LES +VLDV ++ CG RHAALV + G+VF+WGE+SGGRLGHG D +HP+L+
Sbjct: 64 DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 123
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L+ N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG + HW+PKR++G L+G
Sbjct: 124 ESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDG 183
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHG+ S+S P+EVESL GL+T+ AC
Sbjct: 184 LPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVAC 243
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
GVWHTAA+VEV+V +SSSS S+GKLFTWGDGDK RLGHGDKE++L PTCVA+L++ +F
Sbjct: 244 GVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFY 302
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
RVACGHSLTV LTTSG V +MG+ VYGQLGNP +DG+LP VE +++ V ++ACGSYH
Sbjct: 303 RVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYH 362
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
VAVLT ++EV+TWGKGANGRLGHGD +DR P+ VEALKD+ V+ IACG NFTAAICLHK
Sbjct: 363 VAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAICLHK 422
Query: 423 WVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCD 482
WVSG DQS CS C+ PF F RKRHNCYNCGLV C++C+S+K+L+A++APNP KPYRVCD
Sbjct: 423 WVSGADQSQCSSCQQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRVCD 481
Query: 483 NCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQS 542
+CF KL+ D+D S ++R I + D K S+ L+ S+M+ +
Sbjct: 482 SCFLKLKNALDSD-----SFNKRKDIVSHLAGESNGDTKA---SKTILS--SNMDIIRSL 531
Query: 543 EGRSKRN-KKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSR 601
+ ++ R KK + S +P + Q + +S S + M S + S S SR
Sbjct: 532 DSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSAVRSVTTSR 590
Query: 602 ATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
A SP SR+ SPPRSTTP PT GL+ K D+ +TN+ L+QE+ +L AQV
Sbjct: 591 AVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/652 (56%), Positives = 471/652 (72%), Gaps = 23/652 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV----KM 62
D R S+SSA S+SS GS DD D+LGDV++WGE V RVGS + K
Sbjct: 9 DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGE-----VFCENSVRVGSDTIIRSTEKT 63
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D LPK LES +VLDV ++ CG RHAALV + G+VF+WGE+SGGRLGHG D +HP+L+
Sbjct: 64 DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 123
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L+ N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG + HW+PKR++G L+G
Sbjct: 124 ESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDG 183
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHG+ S+S P+EVESL GL+T+ AC
Sbjct: 184 LPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVAC 243
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
GVWHTAA+VEV+V +SSSS S+GKLFTWGDGDK RLGHGDKE++L PTCVA+L++ +F
Sbjct: 244 GVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFY 302
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
RVACGHSLTV LTTSG V +MG+ VYGQLGNP +DG+LP VE +++ V ++ACGSYH
Sbjct: 303 RVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYH 362
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
VAVLT ++EV+TWGKGANGRLGHGD +DR P+ VEALKD+ V+ IACG NFTAAICLHK
Sbjct: 363 VAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAICLHK 422
Query: 423 WVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCD 482
WVSG DQS CS C+ PF F RKRHNCYNCGLV C++C+S+K+L+A++APNP KPYRVCD
Sbjct: 423 WVSGADQSQCSSCQQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRVCD 481
Query: 483 NCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQS 542
+CF KL+ D+D S ++R I + D K S+ L+ S+M+ +
Sbjct: 482 SCFLKLKNALDSD-----SFNKRKDIVSHLAGESNGDTKA---SKTILS--SNMDIIRSL 531
Query: 543 EGRSKRN-KKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSR 601
+ ++ R KK + S +P + Q + +S S + M S + S S SR
Sbjct: 532 DSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSAVRSVTTSR 590
Query: 602 ATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
A SP SR+ SPPRSTTP PT GL+ K D+ +TN+ L+QE+ +L AQV
Sbjct: 591 AVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/659 (55%), Positives = 477/659 (72%), Gaps = 38/659 (5%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
FR+S+SS S SS GSG DD ++LGDV+IWGE DGV G S K D PK
Sbjct: 201 FRISVSSTPSCSSAGSGPDDIESLGDVYIWGEIWSDGVFPDG---SVSSVPTKNDVLTPK 257
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
LES VVLDV I+CG RH ALV +QGEVF+WGEESGGRLGHG++ HPKL+++L+
Sbjct: 258 PLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVT 317
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
NI+ VACGEYHTCA++ SGDL+TWGDG+ N GLLGHG +VSHW+PKRV+GPLEG+ V SI
Sbjct: 318 NIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSI 377
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+CG WH+A+ TS G+LFTFGDGTFG LGHGDRKSVS P+E++SL GL+T++ ACGVWHTA
Sbjct: 378 ACGTWHSALATSNGKLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTA 437
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
A+VEVM + S SN SS KLFTWGDGDK RLGHG+K+A L+PTCV++L++ NF ++ACGH
Sbjct: 438 AIVEVM--SQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGH 495
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
++TVALTTSGHV+TMG YGQLGNP ++GK+P V+ +L FVEEI+CG+YH AVLTS
Sbjct: 496 TMTVALTTSGHVFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTS 555
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
++EV+TWG+GANG+LGHGDT+DR P+LVEALK++ VK+++CG NFT++IC+HKWVSG D
Sbjct: 556 RSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICIHKWVSGAD 615
Query: 429 QSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
QS+CSGCR F F RKRHNCYNCGLV CH+CSSKK++KA++AP P KP+RVCD+C+ KL
Sbjct: 616 QSVCSGCRQAF-GFTRKRHNCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKL 674
Query: 489 RKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRF---SSMESFKQSEGR 545
+ + + S+++R+ ++ P +D EK++ R + +R + E K E +
Sbjct: 675 KA---AESGNTSAINRKTTV---PRRSMDIREKME-RGEPRFSRILLSPTTEPIKYLEIK 727
Query: 546 S-KRNKKLEFNS-SRVSPIPN---------GSSQWGALNISKSFNPMFGSSKKFFSASVP 594
S K+ + E S R S +P+ SS N K P+ + ++S P
Sbjct: 728 SGKQGAQSEAASIVRASQVPSLLPLKDVAFPSSPSTLQNAWKPAPPIV--PQLTVNSSQP 785
Query: 595 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ SR +SP SRRPSPPRS +P + G V+D K+TN+ Q++ K++ Q+
Sbjct: 786 AAN--SRPSSPYSRRPSPPRSASPGFSRG-------VIDSLKKTNEIFKQDMTKMQNQI 835
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/652 (56%), Positives = 471/652 (72%), Gaps = 23/652 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV----KM 62
D R S+SSA S+SS GS DD D+LGDV++WGE V RVGS + K
Sbjct: 86 DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGE-----VFCENSVRVGSDTIIRSTEKT 140
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D LPK LES +VLDV ++ CG RHAALV + G+VF+WGE+SGGRLGHG D +HP+L+
Sbjct: 141 DFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLV 200
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L+ N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG + HW+PKR++G L+G
Sbjct: 201 ESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDG 260
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHG+ S+S P+EVESL GL+T+ AC
Sbjct: 261 LPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIAVAC 320
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
GVWHTAA+VEV+V +SSSS S+GKLFTWGDGDK RLGHGDKE++L PTCVA+L++ +F
Sbjct: 321 GVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFY 379
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
RVACGHSLTV LTTSG V +MG+ VYGQLGNP +DG+LP VE +++ V ++ACGSYH
Sbjct: 380 RVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYH 439
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
VAVLT ++EV+TWGKGANGRLGHGD +DR P+ VEALKD+ V+ IACG NFTAAICLHK
Sbjct: 440 VAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAICLHK 499
Query: 423 WVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCD 482
WVSG DQS CS C+ PF F RKRHNCYNCGLV C++C+S+K+L+A++APNP KPYRVCD
Sbjct: 500 WVSGADQSQCSSCQQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRVCD 558
Query: 483 NCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQS 542
+CF KL+ D+D S ++R I + D K S+ L+ S+M+ +
Sbjct: 559 SCFLKLKNASDSD-----SFNKRKDIVSHLAGESNGDTKA---SKTILS--SNMDIIRSL 608
Query: 543 EGRSKRN-KKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSR 601
+ ++ R KK + S +P + Q + +S S + M S + S S SR
Sbjct: 609 DSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSAVRSVTTSR 667
Query: 602 ATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
A SP SR+ SPPRSTTP PT GL+ K D+ +TN+ L+QE+ +L AQV
Sbjct: 668 AVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 719
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/661 (56%), Positives = 471/661 (71%), Gaps = 33/661 (4%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FR+S+SS S SS GSG DD ++LGDV++WGE D V G S +K D
Sbjct: 199 DGFRISVSSTPSCSSGGSGPDDIESLGDVYLWGEVWSDAVFPDG---SMSSVPIKNDVLT 255
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK LES VVLDVQ IACG RH ALV +QGEVF+WGEESGGRLGHG ++D P+L++ L+
Sbjct: 256 PKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLA 315
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
N++ VACGEYHTCAVT SGDLYTWGDGT N GLLG G +VSHW+PKRV+GPLEG+ V
Sbjct: 316 VTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVF 375
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
SI+CG WH+A+ TS G+LFTFGDG FGVLGHGDR+S+S P+EV+ L GL+T++ ACGVWH
Sbjct: 376 SIACGTWHSALATSNGKLFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWH 435
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAA+VEVM + S +N SS KLFTWGDGDK RLGHG K+ L+PTCV++L++ NF ++AC
Sbjct: 436 TAAIVEVM--SQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIAC 493
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
G +LTVALTTSGHV+TMG +GQLGNP +DGK+P V+ L FVEE++CG++HVAVL
Sbjct: 494 GQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVL 553
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
TS++E+YTWGKGANGRLGHGDT+DR +P+LVEALKD+ VK+I+CG+NFT +IC+HKWVSG
Sbjct: 554 TSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSG 613
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RVCD C+
Sbjct: 614 ADQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYA 672
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTR--FS-SMESFKQSE 543
KL KT DT + +++R+ + P ID EK+D R A +R FS S E K E
Sbjct: 673 KL-KTSDT---GNYNINRKATT---PRRSIDIREKMD-RGEANTSRTLFSPSTEPIKYLE 724
Query: 544 GRSKRNKKLEFNSS--RVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSA------SVPG 595
+S R S R S +PN Q + S + + + K S + P
Sbjct: 725 IKSVRPGMRSEAPSIVRASQVPN-LLQLKDIAFPSSLSAIQNAWKPVSSPVSLSPLNSPQ 783
Query: 596 SRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQVFA 655
SR SP SRRPSPPR ++P G + + V+D K+TN+ L ++ K++ Q+
Sbjct: 784 PMGNSRPASPYSRRPSPPRISSP-----GFS--RSVIDSLKKTNEILKNDMTKVQNQMKT 836
Query: 656 F 656
F
Sbjct: 837 F 837
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/654 (55%), Positives = 471/654 (72%), Gaps = 23/654 (3%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K +D R S+SSA S+SS GS DD D+LGDV++WGE D + V G K
Sbjct: 4 KGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTG-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG RHA+LV + GEVF+WGE+SGGRLGHG D +HP+L
Sbjct: 63 TDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ NI+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +V HW+P+R++GPLE
Sbjct: 123 VESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ ++ +SCG WHTA++TS GQLFTFGDG+FGVLGHGD KS+S PREVESL GL+T+ A
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SS++ S+GKLFTWGDGDK RLGHGDKEA+L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSAT-VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
RVACGHSLTV LTTSG V+TMG+ VYGQLGN +DG+ P VE K++ V +IACGSY
Sbjct: 302 YRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS++EV+TWGKGANGRLGHGD +DR P+ VEAL+D+ V+ IACG NFTAAICLH
Sbjct: 361 HVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQS CS CR PF F RKRHNCYNCGLV C++C+S+K+L+A++AP+P K +RVC
Sbjct: 421 KWVSGADQSQCSSCRQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL+ ++ SS +++ + P E + S + + S++S
Sbjct: 480 DSCYSKLK-------NASSSANKK---DLAPGESNGEARVGKSILSSNMDMIRSLDSKAA 529
Query: 542 SEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV-- 599
+G KK + S +P + Q + S +P + + +A P +R V
Sbjct: 530 KQG-----KKTDALSFLRNPQVSSLLQLRDIAFSGGADPNRPAVPR--AARTPAARSVTS 582
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SRR SPPRSTTP PT GL+ K D+ + N+ LSQEV +LRAQV
Sbjct: 583 SRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQV 636
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/657 (55%), Positives = 473/657 (71%), Gaps = 23/657 (3%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV- 60
+ + D R S+SSA S+SS GS DD D+LGDV++WGE V RVGS +
Sbjct: 4 RGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGE-----VFCENSVRVGSDTIIR 58
Query: 61 ---KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
K D LPK LES +VLDV ++ CG RHAALV + G+VF+WGE+SGGRLGHG D +
Sbjct: 59 STEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSV 118
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
HP+L+++L+ N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG + HW+PKR++
Sbjct: 119 HPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRIS 178
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G L+G+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHG+ S+S P+EVESL GL+T
Sbjct: 179 GALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKT 238
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ ACGVWHTAA+VEV+V +SSSS S+GKLFTWGDGDK RLGHGDKE++L PTCVA+L+
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSSSS-VSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLI 297
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ +F RVACGHSLTV LTTSG V +MG+ VYGQLGNP +DG+LP VE +++ V ++A
Sbjct: 298 DYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVA 357
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
CGSYHVAVLT ++EV+TWGKGANGRLGHGD +DR P+ VEALKD+ V+ IACG NFTAA
Sbjct: 358 CGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAA 417
Query: 418 ICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKP 477
ICLHKWVSG DQS CS C+ PF F RKRHNCYNCGLV C++C+S+K+L+A++APNP KP
Sbjct: 418 ICLHKWVSGADQSQCSSCQQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKP 476
Query: 478 YRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSME 537
YRVCD+CF KL+ D+D S ++R I + D K S+ L+ S+M+
Sbjct: 477 YRVCDSCFLKLKNALDSD-----SFNKRKDIVSHLAGESNGDTK---ASKTILS--SNMD 526
Query: 538 SFKQSEGRSKRN-KKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGS 596
+ + ++ R KK + S +P + Q + +S S + M S + S S
Sbjct: 527 IIRSLDSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSAD-MNRSVPRAVRTSAVRS 585
Query: 597 RIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SR+ SPPRSTTP PT GL+ K D+ +TN+ L+QE+ +L AQV
Sbjct: 586 VTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/654 (55%), Positives = 471/654 (72%), Gaps = 23/654 (3%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K +D R S+SSA S+SS GS DD D+LGDV++WGE D + V G K
Sbjct: 4 KGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTG-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG RHA+LV + GEVF+WGE+SGGRLGHG D +HP+L
Sbjct: 63 TDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ NI+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +V HW+P+R++GPLE
Sbjct: 123 VESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ ++ +SCG WHTA++TS GQLFTFGDG+FGVLGHGD KS+S PREVESL GL+T+ A
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SS++ S+GKLFTWGDGDK RLGHGDKEA+L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSAT-VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
RVACGHSLTV LTTSG V+TMG+ VYGQLGN +DG+ P VE K++ V +IACGSY
Sbjct: 302 YRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS++EV+TWGKGANGRLGHGD +DR P+ VEAL+D+ V+ IACG NFTAAICLH
Sbjct: 361 HVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQS CS CR PF F RKRHNCYNCGLV C++C+S+K+L+A++AP+P K +RVC
Sbjct: 421 KWVSGADQSQCSSCRQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL+ ++ SS +++ + P E + S + + S++S
Sbjct: 480 DSCYSKLK-------NASSSANKK---DLAPGESNGEARVGKSILSSNMDMIRSLDSKAA 529
Query: 542 SEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV-- 599
+G KK + S +P + Q + S +P + + +A P +R V
Sbjct: 530 KQG-----KKTDALSFLRNPQVSSLLQLRDIAFSGGADPNRPAVPR--AARTPAARSVTS 582
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SRR SPPRSTTP PT GL+ K D+ + N+ LSQEV +LRAQV
Sbjct: 583 SRAVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQV 636
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/653 (57%), Positives = 475/653 (72%), Gaps = 17/653 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + DA RVS SSA S+SS GS DD D+ GDV++WGE D + G + V G K
Sbjct: 4 KGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRSTG-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG +HAALV K GEVF+WGEESGGRLGHG D +HP+L
Sbjct: 63 ADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ N+++VACGE+HTCAVT +G+LYTWGDGT+N GLLG+G +VSHW+PKR++G LE
Sbjct: 123 VESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G V+ +SCG WHTA+VTS GQLFTFGDGTFGVLGHG+R+S S PREVESL GL+T+ A
Sbjct: 183 GHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEV+V SSSS SSGKLFTWGDGDK RLGHGDKE +L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAVVEVIVTQSSSSM-SSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
CR+ACGHSLTV LTTSG + +MG+ VYGQLGNP++DGKLP VE + + V ++ACGSY
Sbjct: 302 CRIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKLPCLVEDIMGEHVV-QVACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLT+K+EV+TWGKGANGRLGHGD +DR P+LVEAL+D+ V+ IACG+NFT+AIC H
Sbjct: 361 HVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAICQH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG +QS C+ CR PF F RKRHNC+NCGLV C++C+S K L+A++APNP KPYRVC
Sbjct: 421 KWVSGAEQSQCASCRQPF-GFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+CF KL + S+V+++ + + D KL A+ S+++ +
Sbjct: 480 DSCFMKL-----NSAAYSSAVNKKKEAVPRHSGESNNDAKL-----ARAIVPSNLDMIRS 529
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ + +K+ KK + S +P + Q + +S + M S + SV S S
Sbjct: 530 LDSKAAKQGKKTDALSFLRTPQMSSLLQLKDIALSGGID-MNKSVPRAVRTSV-RSLNSS 587
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RA SP SR+PSPPRSTTP PT GL+ K D +TN+ LSQEV +LRAQV
Sbjct: 588 RAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQV 640
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/659 (56%), Positives = 477/659 (72%), Gaps = 29/659 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + DA RVS SSA S+SS GS DD D+ GDV++WGE D + G + V K
Sbjct: 4 KGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTVIRSTA-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG +HAALV K GEVF+WGEESGGRLGHG D +HP+L
Sbjct: 63 ADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ N+++VACGE+HTCAVT SG+LYTWGDGT+N GLLG+G +VSHW+PKR++G LE
Sbjct: 123 VESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G V+ +SCG WHTA+VTS GQLFTFGDGTFGVLGHG+R+S S PREVESL GL+T+ A
Sbjct: 183 GHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEV+V SSSS SSGKLFTWGDGDK RLGHGDKE KL PTCVA+L++ +F
Sbjct: 243 CGVWHTAAVVEVIVTQSSSSM-SSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
CR+ACGHSLTV LTTSG V +MG+ VYGQLGNP++DGKLP +E + + V ++ACGSY
Sbjct: 302 CRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKLPCLIEDIMGEHVV-QVACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLT+K+EV+TWGKGANGRLGHGD +DR P+LVE+L+D+ V+ IACG+NFT+AIC H
Sbjct: 361 HVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAICQH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG +QS C+ CR PF F RKRHNC+NCGLV C++C+S K L+A++APNP KPYRVC
Sbjct: 421 KWVSGAEQSQCASCRQPF-GFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+CF KL + S+++++ + + + D KL A+ S+++ +
Sbjct: 480 DSCFMKL-----NSAAYSSTINKKKEVVPRHSGESNHDAKL-----ARAIVPSNLDMIRS 529
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQW------GALNISKSFNPMFGSSKKFFSASVP 594
+ + +K+ KK + S +P + Q G ++++KS +S + ++
Sbjct: 530 LDSKAAKQGKKTDALSFLRTPQMSSLLQLRDITLSGGIDLNKSVPRAVRTSVRSLNS--- 586
Query: 595 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SRA SP SR+PSPPRSTTP PT GL+ K D +TN+ LSQEV +LRAQV
Sbjct: 587 -----SRAVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQV 640
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/663 (54%), Positives = 471/663 (71%), Gaps = 36/663 (5%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + D R S+SSA S+SS GS DD D+LGDV++WGE D + V G K
Sbjct: 4 KGPSSDVLRASISSAPSTSSHGSAPDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTG-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG RHA+LV + GEVF+WGE+SGGRLGHG D +HP+L
Sbjct: 63 TDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ NI+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +V HW+P+R++G LE
Sbjct: 123 VESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+ +SCG WHTA++TS GQLFTFGDG+FGVLGHG+ KS+S PREVESL GL+T+ A
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SS++ S+GKLFTWGDGDK RLGHGDKEA+L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSAT-VSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
RVACGHSLTV LTTSG V+TMG+ VYGQLGNP +DG+ P V K++ V ++ACGSY
Sbjct: 302 YRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVGDKITNEHVLQVACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HV+VLTS++EV+TWGKGANGRLGHGD +D+ P+LVEALKD+ V+ IACG NFTAAICLH
Sbjct: 361 HVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFTAAICLH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQS CS CR PF F RKRHNCYNCGLV C++C+S+K+L+A++APNP K +RVC
Sbjct: 421 KWVSGADQSQCSSCRQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKLHRVC 479
Query: 482 DNCFNKLRKTFDT-------DGSSHSSVSRRGSINQGPNEF---IDKDEKLDSRSRAQLT 531
D+CF+KL+ D+ D + H S G + G + +D LDS++ Q
Sbjct: 480 DSCFSKLKNASDSSSANKKKDLAPHLSGESNGEVRVGKSILPSNMDMIRSLDSKAAKQGK 539
Query: 532 RFSSMESFKQSEGRS-KRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFS 590
+ ++ + + S + + + F+ G +++++S +
Sbjct: 540 KTDALSFLRNPQVSSLMQLRDIAFS--------------GGIDLNRSV-------PRAVR 578
Query: 591 ASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLR 650
S S SRA SP SR+ SPPRSTTP PT GL+ K D+ +TN+ L+QEV +LR
Sbjct: 579 TSAVRSVTSSRAVSPFSRKSSPPRSTTPIPTTHGLSFSKSATDNLVKTNEFLNQEVERLR 638
Query: 651 AQV 653
AQV
Sbjct: 639 AQV 641
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/652 (55%), Positives = 466/652 (71%), Gaps = 19/652 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K +D R S+SSA S+SS GS DD D+LGDV++WGE D + V G K
Sbjct: 4 KGPPLDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTVIRSTG-K 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG RHA+LV + GEVF+WGE+SGGRLGHG D +HP+L
Sbjct: 63 TDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ NI+ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +V HW+P+R++GPLE
Sbjct: 123 VESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ ++ +SCG WHTA++TS GQLFTFGDG+FGVLGHGD KS+S PREVESL GL+T+ A
Sbjct: 183 GLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SS++ S+GKLFTWGDGDK RLGHGDKEA+L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSAT-VSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
RVACGHSLTV LTTSG V+TMG+ VYGQLGN +DG+ P VE K++ V +IACGSY
Sbjct: 302 YRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLTS++EV+TWGKGANGRLGHGD +DR P+ VEAL+D+ V+ IACG NFTAAICLH
Sbjct: 361 HVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG DQS CS CR PF F RKRHNCYNCGLV C++C+S+K+L+A++AP+P K +RVC
Sbjct: 421 KWVSGADQSQCSSCRQPF-GFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+C++KL+ ++ SS +++ + P E + S + + S++S
Sbjct: 480 DSCYSKLK-------NASSSANKK---DLAPGESNGEARVGKSILSSNMDMIRSLDSKAA 529
Query: 542 SEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSR 601
+G KK + S +P + Q + S + ++ + S SR
Sbjct: 530 KQG-----KKTDALSFLRNPQVSSLLQLRDIAFSGGADLNRPAAPRAARTPAARSVTSSR 584
Query: 602 ATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
A SP SRR SPPRSTTP PT GL+ K D+ + N+ LSQEV +LRAQV
Sbjct: 585 AVSPFSRRSSPPRSTTPVPTTHGLSLSKSATDNLVKANELLSQEVERLRAQV 636
>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
Length = 1170
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/659 (54%), Positives = 469/659 (71%), Gaps = 45/659 (6%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K D RVS+SSA +SS GS DD DAL DV+IWGE + + G V C
Sbjct: 274 IKGSGTDTVRVSVSSA--TSSHGSAPDDYDALADVYIWGEIICENIKVGADKSVHFC--P 329
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+ D LP+ LES VVLDVQ+IACG RHA+LV +QGEVF+WGEESGGRLGHGV +V+ P+
Sbjct: 330 RADVLLPRPLESNVVLDVQHIACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPR 389
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++AL++ ++ VACGE+H+CAVT++G+LYTWGDGT+N GLLGHG+ SHW+PKR+ GPL
Sbjct: 390 LVEALTSTTVDFVACGEFHSCAVTMTGELYTWGDGTHNAGLLGHGSNASHWIPKRIGGPL 449
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+G+ VS ++CGPWHTA++TS G +++VS PREV+SL GLRT+
Sbjct: 450 DGLQVSFVACGPWHTALITSTG-----------------KENVSYPREVDSLLGLRTIAV 492
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAAVVEV+ S +S SSGKLFTWGDGDK RLGHGDKE++L PTCV A+++ +
Sbjct: 493 ACGVWHTAAVVEVIATQSIAS-LSSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYD 551
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGHSLTV LTT+G V+TMGS VYGQLGNPQ+DGKLP V K++ VEEI+CG+
Sbjct: 552 FKKIACGHSLTVGLTTTGRVFTMGSTVYGQLGNPQSDGKLPCLVGDKIALESVEEISCGA 611
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTSK EVYTWGKG+NGRLGHGD +DR +P+LVEALKD+ VK IAC +N++AAICL
Sbjct: 612 YHVAVLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDRHVKYIACASNYSAAICL 671
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG +QS CS CR F F RKRHNCYNCGLV CHSCSSKK+L+A++APNP+K YRV
Sbjct: 672 HKWVSGAEQSQCSTCRQAF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALAPNPDKHYRV 730
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+C+ KL K + + S +RR ++ + E D+ +K + R L S+M+ K
Sbjct: 731 CDSCYAKLSKVAEANNS-----NRRNALPRLSGENKDRLDKSELRVSKALIP-SNMDLIK 784
Query: 541 QSEGR-SKRNKKLE-FNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSAS----VP 594
Q + + +K+ KK + F+ +R S P + + + +F ++ + +
Sbjct: 785 QLDNKAAKQGKKSDTFSLARNSQTP----------LLQLKDVVFATAADLRRTTPRPVIA 834
Query: 595 GSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S + +R+ SP SRR SPPRS TP PT+ GL+ K + D K+TN+ L++EV KL AQV
Sbjct: 835 PSGVSTRSASPFSRRSSPPRSATPIPTMSGLSFSKNIADSLKKTNELLNKEVQKLHAQV 893
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/653 (55%), Positives = 474/653 (72%), Gaps = 19/653 (2%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + D RVS SSA S+SS GS DD D+ GDV++WGE D + G + V V+
Sbjct: 4 KGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSVRTGSDTVVRST-VR 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D PK LES +VLD ++ CG +H+ALV K GEVF+WGEESGGRLGHG D +HP+L
Sbjct: 63 TDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I++L+ N+++VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +VSHW+PKR+ G LE
Sbjct: 123 IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+ +SCG WHTA++T+ GQLFTFGDGTFGVLGHG+R+S+S P+EVESL GL+T+ A
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SSSS SSGKLFTWGDGDK RLGHGDKE +L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSSSI-SSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
R+ACGHSLTV LTTSG V +MG+ VYGQLGNP++DGK+P VE + ++ V ++ACGSY
Sbjct: 302 HRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVV-QVACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLT K+EV+TWGKGANGRLGHGD +DR P+LVEAL+D+ V+ IACG NFTAAIC H
Sbjct: 361 HVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG +QS C+ CR PF F RKRHNC+NCGLV C++C+S+K+++A++APNP KPYRVC
Sbjct: 421 KWVSGAEQSQCASCRQPF-GFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRVC 479
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+CF KL D+ S++S++ E + ++ D R + S+++ +
Sbjct: 480 DSCFLKLNNAVDS-----SAISKK-------KENVLRESNSDGRLTKAIIP-SNLDMIRS 526
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ + +K+ KK + S +P N Q + +S + + + +V S S
Sbjct: 527 LDSKAAKQGKKTDALSFLRTPQMNSLLQLRDIALSGGLDLNRPVPRAVRTTAVR-SVNTS 585
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
RA SP SR+PSPPRSTTP PT GL+ K D+ +TN+ L+QEV +LRAQV
Sbjct: 586 RAVSPFSRKPSPPRSTTPVPTTHGLSIGKGAADNLAKTNEMLNQEVERLRAQV 638
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/651 (54%), Positives = 467/651 (71%), Gaps = 23/651 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FR S+SS S SS GSG DD ++LGDV++WGE D VL G S VK D
Sbjct: 200 DGFRSSVSSTPSCSSGGSGPDDIESLGDVYVWGEIWTDLVLPDG---TSSQIPVKNDVLT 256
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK LE+ VVLDVQ IACG RH ALV +QGEVF+WGEE GGRLGHG+D D P L++ L+
Sbjct: 257 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLA 316
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+++ VACGEYHTCA+T S DLYTWGDG +N G+LGHG ++SHW+PKRV G LEG+ V
Sbjct: 317 VSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVL 376
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
S++CG WH+A+ TS G+L+TFGDGT+GVLGHGDR+SV PREV+ L GLRT++ ACGVWH
Sbjct: 377 SVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWH 436
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAA+VEVM + + SN SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ NF ++AC
Sbjct: 437 TAAIVEVM--SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLAC 494
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
GH++TVALTTSGHV+TMG YGQLGNP +DG +P V+ +L FVEEI+CG+YH VL
Sbjct: 495 GHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVL 554
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
TS+ EV++WG+G+NGRLGHGD +DR +P+L+EALKD+ VKSI+CG+NFTA+IC+HKWVSG
Sbjct: 555 TSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 614
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
DQS+C+GCR F F RKRHNCYNCGLV CHSCSSKK+LKA++AP P KP+RVCD+C+
Sbjct: 615 ADQSVCTGCRQAF-GFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYA 673
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESFKQSEGR 545
KL+ + ++ V+R+ + N+ ++ ++ ++ D R SR L+ + E K E +
Sbjct: 674 KLK---SAEAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLS--PTTEPVKYHEIK 728
Query: 546 SKR--NKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSA-SVPGSRIVSRA 602
S R ++ + R S +P+ Q + S + + + + A P SR
Sbjct: 729 SVRPGSRPTSPSMVRASQVPS-LQQLKDIAFPSSLSAIQNALRPALVAPPSPPPMGNSRP 787
Query: 603 TSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SP +RRPSPPRSTTP + K V+D K++N++L Q+ KL+ +V
Sbjct: 788 ASPYARRPSPPRSTTPVFS-------KSVIDSLKKSNETLVQDKSKLQREV 831
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/651 (54%), Positives = 467/651 (71%), Gaps = 23/651 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FR S+SS S SS GSG DD ++LGDV++WGE D VL G S VK D
Sbjct: 62 DGFRSSVSSTPSCSSGGSGPDDIESLGDVYVWGEIWTDLVLPDG---TSSQIPVKNDVLT 118
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK LE+ VVLDVQ IACG RH ALV +QGEVF+WGEE GGRLGHG+D D P L++ L+
Sbjct: 119 PKPLETNVVLDVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLA 178
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+++ VACGEYHTCA+T S DLYTWGDG +N G+LGHG ++SHW+PKRV G LEG+ V
Sbjct: 179 VSHVDFVACGEYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVL 238
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
S++CG WH+A+ TS G+L+TFGDGT+GVLGHGDR+SV PREV+ L GLRT++ ACGVWH
Sbjct: 239 SVACGTWHSALATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWH 298
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAA+VEVM + + SN SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ NF ++AC
Sbjct: 299 TAAIVEVM--SQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLAC 356
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
GH++TVALTTSGHV+TMG YGQLGNP +DG +P V+ +L FVEEI+CG+YH VL
Sbjct: 357 GHNMTVALTTSGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVL 416
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
TS+ EV++WG+G+NGRLGHGD +DR +P+L+EALKD+ VKSI+CG+NFTA+IC+HKWVSG
Sbjct: 417 TSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSG 476
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
DQS+C+GCR F F RKRHNCYNCGLV CHSCSSKK+LKA++AP P KP+RVCD+C+
Sbjct: 477 ADQSVCTGCRQAF-GFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYA 535
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESFKQSEGR 545
KL+ + ++ V+R+ + N+ ++ ++ ++ D R SR L+ + E K E +
Sbjct: 536 KLK---SAEAGNNFCVNRKLTANRRSTDYKERFDRGDVRPSRILLS--PTTEPVKYHEIK 590
Query: 546 SKR--NKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSA-SVPGSRIVSRA 602
S R ++ + R S +P+ Q + S + + + + A P SR
Sbjct: 591 SVRPGSRPTSPSMVRASQVPS-LQQLKDIAFPSSLSAIQNALRPALVAPPSPPPMGNSRP 649
Query: 603 TSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SP +RRPSPPRSTTP + K V+D K++N++L Q+ KL+ +V
Sbjct: 650 ASPYARRPSPPRSTTPVFS-------KSVIDSLKKSNETLVQDKSKLQREV 693
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/650 (54%), Positives = 452/650 (69%), Gaps = 13/650 (2%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A+DAFR S SSAVSSS S H+D D GDV GEG + LGG + V S ++MD+
Sbjct: 227 AVDAFRNSSSSAVSSSGYVSSHEDVDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDA 286
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
LPKAL+ LD Q IACG +HA +V KQG++FSWGE SGG+LGHG D+DV PK+IDA
Sbjct: 287 LLPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDA 346
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
LS N+ LVACGE+HTCAVT+SG+LYTWGD T+N G LGHG+ VSHW+P+ V G +E +
Sbjct: 347 LSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVR 406
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+S +SCGPWHTA V+S G+LFTFGDGTFG LGHGDR S S PREVESLKGLRT++ +CG+
Sbjct: 407 ISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESLKGLRTLKVSCGI 466
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
WHTAAV++ + + SGKLFTWG G++G+LGHGD+E +LVP+CV+ + C+V
Sbjct: 467 WHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVS--MPAGVCQV 524
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
AC HS+T+ALT G VYTMG+ YGQLG+P + GKLP +G + +++IACGS+HV
Sbjct: 525 ACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVV 584
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
L+S +VYTWGKG NG+LGHGD DR++P+LV+ALK KQVKS+ CG+NFTA IC HK V
Sbjct: 585 ALSSNGDVYTWGKGINGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGSNFTAVICPHKCV 644
Query: 425 SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNC 484
S DQS+CSGC PF NF+RKRHNCYNCGL+FC +CSSK+SLKA++APN NKP RVCD C
Sbjct: 645 SSADQSICSGCHNPF-NFRRKRHNCYNCGLLFCKACSSKRSLKAALAPNVNKPSRVCDEC 703
Query: 485 FNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQS-E 543
F KL + S RGS++ E I + E + S Q R SS++SFKQ+
Sbjct: 704 FAKLTTAMEDGPKLQVPKSCRGSLHYNCKE-IAEAESITSNPSHQHCRLSSLDSFKQALR 762
Query: 544 GRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRAT 603
S+ NKK E VSP GS +W + M SAS PGS ++SRAT
Sbjct: 763 QNSQHNKKAESCQCHVSPTQIGSLEWELTYEYEDLGEM--------SASDPGSGMLSRAT 814
Query: 604 SPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SP+SRR S S + +++ D++K+ N+SLSQE++ LR QV
Sbjct: 815 SPVSRRSSQEHSLRSASSFNNFAHAELLPDNSKQRNESLSQEILLLRGQV 864
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/668 (53%), Positives = 452/668 (67%), Gaps = 81/668 (12%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ +D FR+S+SS S SSQGSG DD ++LGDV++WGE
Sbjct: 229 LRTSGVDGFRISVSSTPSCSSQGSGPDDIESLGDVYVWGE-------------------- 268
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
IACG RH ALV +QGEVF+WGEESGGRLGHG+D+D P
Sbjct: 269 --------------------IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 308
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++ L+ N++ VACGEYHTCAV+ SGDL+TWGDGT+N GLLGHG EVSHW+PKRV+GPL
Sbjct: 309 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPL 368
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ TS G+LFTFGDGTFGVLGHGDR+SV PREV+ L GL+T++
Sbjct: 369 EGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKV 428
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHTAA++EVM + S +N SS KLFTWGDGDK RLGHG KE L+PTCV+AL++ N
Sbjct: 429 ACGVWHTAAIIEVM--SQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYN 486
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH++TVALTTSGHV+TMG YGQLGNP +DG+LP V+ KL FVEEI+CG+
Sbjct: 487 FHQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGA 546
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLTS++EV+TWG+GANGRLGHGDT+DR SP+ VEALKD+ VKSI+CG+NFTA+IC+
Sbjct: 547 YHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICI 606
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RV
Sbjct: 607 HKWVSGADQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRV 665
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD C+ KL+ D S +R+ ++ + + + ++ + RS L + F
Sbjct: 666 CDPCYAKLKAAEAGDA---SIFNRKNTVPRRSIDATIRSDRGEVRSARILMSPGPINYF- 721
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPN---------GSSQWGALNISKSFNPMFGSSKKFFSA 591
EF +R+ P P+ G S + S + + + K +A
Sbjct: 722 ------------EFKPARLGPRPDPSPMIQSSQGPSLLKDIAFPSSLSALQNALKPVITA 769
Query: 592 S------VPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQE 645
S P SR SP SRRPSPPRS P + + V+D K+TN+ L+QE
Sbjct: 770 SPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFS-------RSVIDSLKKTNELLNQE 822
Query: 646 VIKLRAQV 653
V KL+ QV
Sbjct: 823 VTKLQNQV 830
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/657 (53%), Positives = 464/657 (70%), Gaps = 39/657 (5%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K+++ R+S+SSA+S+SS GSG +D ++ GD+++WGE D + G +R G
Sbjct: 188 VKSVSSSDIRISVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPGT 247
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D +PK LES V+LDV +ACG +HAALV +Q EVF+WGEE GRLGHG+ ++V P+
Sbjct: 248 TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPR 307
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS N+EL+ACGE+HTCAVT +GDLYTWGDGT+N GLLGHG+ VSHW+PKRV+GPL
Sbjct: 308 LVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 367
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+G+ VS++SCG WHTA++TS+GQL+TFGDGTFGVLGHG+R S S P+EVESLKGLRT+
Sbjct: 368 DGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISV 427
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVEV++ S SN SSGKLFTWGDGDK RLGHGD+ +KL PTCV +L++ N
Sbjct: 428 SCGVWHTAAVVEVII---SQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYN 484
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F + ACGH+LT+ LTTSGH++T+GSPVYGQLGNP DG+ P VE +L V E+ACGS
Sbjct: 485 FHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGS 544
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLT+ EVYTWGKG NGRLGHGD DR P+LVEALKD+ VK +ACG++FTAAIC
Sbjct: 545 YHVAVLTNAGEVYTWGKGTNGRLGHGDIADRKVPTLVEALKDRSVKRVACGSSFTAAICQ 604
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG++QS CS CR PF F RKRHNCYNCGLV CHSCSSKK+L+A+++PNP KPYRV
Sbjct: 605 HKWVSGMEQSQCSACRQPF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 663
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+C+ KL K D+ G S+S R +I + P + K E++D+++ ++ + +S + +
Sbjct: 664 CDSCYVKLSKVLDS-GVSYS----RNTIPRLPGD--TKAERIDTKA-TRVAQSNSSDMIR 715
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ ++ + K SS+V P K S P + +S
Sbjct: 716 NLDVKAAKQTKKSEYSSQV--------------------PATLQLKDIPFISAPDLQNLS 755
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLT----SPKIVVDDAKRTNDSLSQEVIKLRAQV 653
++ P PRST P+ + L + K N+ L QEV KL+A+V
Sbjct: 756 TVA---NQYPYDPRSTLPSLRMPYLNYSSSMSSESSESLKDANELLKQEVQKLQAEV 809
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/633 (54%), Positives = 438/633 (69%), Gaps = 45/633 (7%)
Query: 22 QGSGHDDGDALGDVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQN 80
QGSG DD ++LGDV++WGE D + G N V S K D +PK LES VVLDVQ
Sbjct: 203 QGSGPDDIESLGDVYVWGEVWTDVIPSEGSSNLVCS----KTDVLIPKPLESDVVLDVQQ 258
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG RH AL +QGEVF+WGEE GGRLGHG D D+ PKL+++L+ N+E +ACGE+HT
Sbjct: 259 ISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHT 318
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
CAVT SGDLY WGDG+YN GLLGHG SHW+PKRV+GPLEG+ V S++CG WH+A+ S
Sbjct: 319 CAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMS 378
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G++FTFGDGTFG LGHG+R++V+ P+EVESL G RT++ ACGVWH+AA+VE + +
Sbjct: 379 SGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETT--SQTG 436
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
N S KLFTWGDGDK RLGHGDKEA+LVPT V ALV+ NF +VACG+S+T+AL TSGHV
Sbjct: 437 VNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHV 496
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+TMGS YGQLGNP+ADGK P +V+ KLS VEEI+CGSYHVAVLTS++EVYTWG GAN
Sbjct: 497 FTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGAN 556
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFN 440
GRLGHG +D+ P++V+ALKD+ VKSIACG+NFT IC+HKWVSG DQS+CSGCR PF
Sbjct: 557 GRLGHGGIEDKKKPTIVDALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPF- 615
Query: 441 NFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHS 500
F RKRHNCYNCGLV CH+CSS+K LKA++AP P KP+RVCD+CF KL+ D S+S
Sbjct: 616 GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKA---ADSGSNS 672
Query: 501 SVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVS 560
+++ I + + +K E+ D R ++L + E K ++ +S RN V
Sbjct: 673 PYNKKSVITRRSVDIKEKSERPDIRP-SRLATAAPAEPMKHADTKSVRND--------VK 723
Query: 561 PIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTP 620
P P A P + V SP + S P T +P
Sbjct: 724 PDPTT------------------------MARAPQALSVPTTVSPAQPKKSNPSPATVSP 759
Query: 621 TLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
L + K D K+T ++L+QE+ KL+ QV
Sbjct: 760 -LAIKSDTKSDTDGMKKTIETLNQELSKLQTQV 791
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/666 (52%), Positives = 472/666 (70%), Gaps = 37/666 (5%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M + D FR+S+SS S SS GSG DD ++LGDV++WGE +G+L G S V
Sbjct: 188 MLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNETV 244
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K D P+ LES VVLDV I CG RH ALV +QGEVF+WGEE GGRLGHG+ D+ PK
Sbjct: 245 KTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 304
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++ L+ NI+ VACGEYHTC V+ SGDL++WGDG +N GLLGHG+++SHW+PKRV+GPL
Sbjct: 305 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 364
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ T+ G+LFTFGDG FGVLGHG+R+SVS P+EV+SL GL+TV+
Sbjct: 365 EGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKV 424
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
AC +WHTAA+VEVM ++++ SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ N
Sbjct: 425 ACSIWHTAAIVEVM--GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYN 482
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH+ TVALTTSGHV+TMG +GQLGN +DGKLP V+ +L FVEEIACG+
Sbjct: 483 FHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGA 542
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+HVAVLTS++EV+TWGKGANGRLGHGDT+D+ +P+LVEAL+D+ VKS++CG+NFT++IC+
Sbjct: 543 HHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICI 602
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RV
Sbjct: 603 HKWVSGADQSICSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRV 661
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESF 539
CD C++KL+ + S+V+R + P ID + D +R+ S+ ++
Sbjct: 662 CDACYSKLKA---AESGYSSNVNRNVAT---PGRSIDGSVRTDRETTRSSKVLLSANKNS 715
Query: 540 KQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
S R E +++R S +P+ Q + S + + + K + + R +
Sbjct: 716 VMSSSRPGFTP--ESSNARASQVPS-LQQLKDIAFPSSLSAIQNAFKPVVAPTTTPPRTL 772
Query: 600 ------------SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVI 647
R++SP +RRPSPPR++ G + + V+D ++TN+ ++QE+
Sbjct: 773 VIGPSSPSPPPPPRSSSPYARRPSPPRTS-------GFS--RSVIDSLRKTNEVMNQEMT 823
Query: 648 KLRAQV 653
KL +QV
Sbjct: 824 KLHSQV 829
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/657 (53%), Positives = 464/657 (70%), Gaps = 39/657 (5%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K+++ R+S+SSA+S+SS GSG +D ++ GD+++WGE D + G +R G
Sbjct: 3 VKSVSSSDIRISVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPGT 62
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D +PK LES V+LDV +ACG +HAALV +Q EVF+WGEE GRLGHG ++V P+
Sbjct: 63 TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPR 122
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS N+EL+ACGE+HTCAVT +GDLYTWGDGT+N GLLGHG+ VSHW+PKRV+GPL
Sbjct: 123 LVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 182
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+G+ VS++SCG WHTA++TS+GQL+TFGDGTFGVLGHG+R S S P+EVESLKGLRT+
Sbjct: 183 DGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISV 242
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWHTAAVVEV++ S SN SSGKLFTWGDGDK RLGHGD+ +KL PTC+ +L++ N
Sbjct: 243 SCGVWHTAAVVEVII---SQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYN 299
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F + ACGH+LT+ LTTSGH++T+GS VYGQLGNP DG+ P VE +L V E+ACGS
Sbjct: 300 FHKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGS 359
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLT+ EVYTWGKGANGRLGHGD DR P+LVEAL+D+ VK +ACG++FTAAIC
Sbjct: 360 YHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAICQ 419
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG++QS CS CR PF F RKRHNCYNCGLV CHSCSSKK+L+A+++PNP KPYRV
Sbjct: 420 HKWVSGMEQSQCSACRQPF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 478
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+C+ KL K D+ G S+S R +I + P + K E++D+++ ++ SS + +
Sbjct: 479 CDSCYVKLSKVLDS-GVSYS----RNTIPRIPGD--TKAERIDTKAN-KVAPSSSSDMIR 530
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ ++ + K SS+V P K S P +
Sbjct: 531 NLDVKAAKQTKKSDYSSQV--------------------PAMLQLKDIPFISAPD---LQ 567
Query: 601 RATSPISRRPSPPRSTTP---TPTLGGLTSPKIVVDDAKR-TNDSLSQEVIKLRAQV 653
+++ ++ P RST P P L +S ++ R N+ L QEV KL+A+V
Sbjct: 568 NSSTVANQFPYDSRSTLPFLRMPYLNYSSSLSSESSESLRDANELLKQEVQKLQAEV 624
>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
[Arabidopsis thaliana]
Length = 1028
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/650 (55%), Positives = 462/650 (71%), Gaps = 20/650 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FR+SLSSAVS+SS GS H+D DALGDVF+WGE DGVL G N + S D+ L
Sbjct: 221 DPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNS---TTEDALL 277
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PKALES +VLD QNIACG HA LV KQGE+FSWGE GG+LGHG+++D PK I ++
Sbjct: 278 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVR 337
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ + +ACG++HTCA+T SGDLY+WGDGT+N LLGHGNE S W+PKRV G L+G++VS
Sbjct: 338 GLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVS 397
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CGPWHTAVV S+GQLFTFGDGTFG LGHGDR+S S+PREVESL GL + ACGVWH
Sbjct: 398 DVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWH 457
Query: 247 TAAVVEVMVGNSSSS-NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
TAAVVEV S + + S G++FTWGDG+KG+LGHGD + KL+P CV +L N C+VA
Sbjct: 458 TAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVA 517
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
CGHSLTV+ T+ GHVYTMGS YGQLGNP A G P RVEG + ++ VEEIACGSYHVAV
Sbjct: 518 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAV 577
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
LTSK+E+YTWGKG NG+LGHG+ +++ P++V L++KQVK+I CG+NFTA IC+HKWV
Sbjct: 578 LTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVP 637
Query: 426 GVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCF 485
G + S+C+GCR PF NF+RKRHNCYNCGLVFC CSS+KSL+A++AP+ NKPYRVC CF
Sbjct: 638 GSEHSLCAGCRNPF-NFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCF 696
Query: 486 NKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSME-SFKQSEG 544
KL+K+ ++ S+ +S +R+ +N + + + + L + + R SS + S SE
Sbjct: 697 TKLKKSRESSPSTPTSRTRK-LLNMRKSTDVSERDSLTQKFLSVNARLSSADSSLHYSER 755
Query: 545 R-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRAT 603
R +R+ K E N+S V P NGS Q SK + K +PGS + SR T
Sbjct: 756 RHHRRDLKPEVNNSNVFPSMNGSLQPVGSPFSKGSTALPKIPKNMM-VKIPGSGMSSRTT 814
Query: 604 SPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SP+S + + PR S ++ ++K+ DS +Q++ L+ QV
Sbjct: 815 SPVSVKSTSPRR-----------SYEVAAAESKQLKDSFNQDMAGLKEQV 853
>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1041
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/650 (55%), Positives = 462/650 (71%), Gaps = 20/650 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FR+SLSSAVS+SS GS H+D DALGDVF+WGE DGVL G N + S D+ L
Sbjct: 234 DPFRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNS---TTEDALL 290
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PKALES +VLD QNIACG HA LV KQGE+FSWGE GG+LGHG+++D PK I ++
Sbjct: 291 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVR 350
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ + +ACG++HTCA+T SGDLY+WGDGT+N LLGHGNE S W+PKRV G L+G++VS
Sbjct: 351 GLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVS 410
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CGPWHTAVV S+GQLFTFGDGTFG LGHGDR+S S+PREVESL GL + ACGVWH
Sbjct: 411 DVACGPWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWH 470
Query: 247 TAAVVEVMVGNSSSS-NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
TAAVVEV S + + S G++FTWGDG+KG+LGHGD + KL+P CV +L N C+VA
Sbjct: 471 TAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVA 530
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
CGHSLTV+ T+ GHVYTMGS YGQLGNP A G P RVEG + ++ VEEIACGSYHVAV
Sbjct: 531 CGHSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAV 590
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
LTSK+E+YTWGKG NG+LGHG+ +++ P++V L++KQVK+I CG+NFTA IC+HKWV
Sbjct: 591 LTSKSEIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVP 650
Query: 426 GVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCF 485
G + S+C+GCR PF NF+RKRHNCYNCGLVFC CSS+KSL+A++AP+ NKPYRVC CF
Sbjct: 651 GSEHSLCAGCRNPF-NFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCF 709
Query: 486 NKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSME-SFKQSEG 544
KL+K+ ++ S+ +S +R+ +N + + + + L + + R SS + S SE
Sbjct: 710 TKLKKSRESSPSTPTSRTRK-LLNMRKSTDVSERDSLTQKFLSVNARLSSADSSLHYSER 768
Query: 545 R-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRAT 603
R +R+ K E N+S V P NGS Q SK + K +PGS + SR T
Sbjct: 769 RHHRRDLKPEVNNSNVFPSMNGSLQPVGSPFSKGSTALPKIPKNMM-VKIPGSGMSSRTT 827
Query: 604 SPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SP+S + + PR S ++ ++K+ DS +Q++ L+ QV
Sbjct: 828 SPVSVKSTSPRR-----------SYEVAAAESKQLKDSFNQDMAGLKEQV 866
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/665 (52%), Positives = 471/665 (70%), Gaps = 37/665 (5%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M + D FR+S+SS S SS GSG DD ++LGDV++WGE +G+L G S V
Sbjct: 179 MLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TASNETV 235
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K D P+ LES VVLDV I CG RH ALV +QGEVF+WGEE GGRLGHG+ D+ PK
Sbjct: 236 KTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 295
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++ L+ NI+ VACGEYHTC V+ SGDL++WGDG +N GLLGHG+++SHW+PKRV+GPL
Sbjct: 296 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 355
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ T+ G+LFTFGDG FGVLGHG+R+SVS P+EV+SL GL+TV+
Sbjct: 356 EGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKV 415
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
AC +WHTAA+VEVM ++++ SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ N
Sbjct: 416 ACSIWHTAAIVEVM--GQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYN 473
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH+ TVALTTSGHV+TMG +GQLGN +DGKLP V+ +L FVEEIACG+
Sbjct: 474 FHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGA 533
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+HVAVLTS++EV+TWGKGANGRLGHGDT+D+ +P+LVEAL+D+ VKS++CG+NFT++IC+
Sbjct: 534 HHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICI 593
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RV
Sbjct: 594 HKWVSGADQSICSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRV 652
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSR-SRAQLTRFSSMESF 539
CD C++KL+ + S+V+R + P ID + D +R+ S+ ++
Sbjct: 653 CDACYSKLKA---AESGYSSNVNRNVAT---PGRSIDGSVRTDRETTRSSKVLLSANKNS 706
Query: 540 KQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIV 599
S R E +++R S +P+ Q + S + + + K + + R +
Sbjct: 707 VMSSSRPGFTP--ESSNARASQVPS-LQQLKDIAFPSSLSAIQNAFKPVVAPTTTPPRTL 763
Query: 600 ------------SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVI 647
R++SP +RRPSPPR++ G + + V+D ++TN+ ++QE+
Sbjct: 764 VIGPSSPSPPPPPRSSSPYARRPSPPRTS-------GFS--RSVIDSLRKTNEVMNQEMT 814
Query: 648 KLRAQ 652
KL +Q
Sbjct: 815 KLHSQ 819
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/656 (53%), Positives = 467/656 (71%), Gaps = 38/656 (5%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ A D+ RVS+SSA+SS SQGSG DD ++LGDV++WGE D G + SC
Sbjct: 184 IRTSAADSSRVSISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDG-HTSSSC--S 240
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+D +PK LES VVLDV IACG RH AL +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 241 KVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS ++L++CGE+HTCAVT SGDL+ WGDG+YN GLLG G EVS+W+PK+V+GPL
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ TS+G+L+TFGDGTFGVLGHGDR++++ P+EVE+L G +T++
Sbjct: 361 EGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKV 420
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACG+WH+AA+VEV N + +N S KL+TWGDGDK RLGHGDKE +LVP CV AL+E N
Sbjct: 421 ACGIWHSAAIVEVT--NQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYN 478
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH++TVAL TSG V+TMGS GQLGNP++DGK P V+ +L+ VEEI+CG+
Sbjct: 479 FHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGA 538
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HV VLTS++EVYTWG GANGRLGHGD DR P LVEALKD+ VKSI+CG+NFT IC+
Sbjct: 539 SHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICI 598
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+C+GCR F F RKRH+CYNCGLV CH+CSS+K LKA++AP P KP+RV
Sbjct: 599 HKWVSGADQSVCTGCRQAF-GFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRV 657
Query: 481 CDNCFNKLR--KTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSS-ME 537
CD+CF KL+ +T + + ++V+RR ID EKL+ R + +R ++ E
Sbjct: 658 CDSCFLKLKAAETGSNNSNRRNAVTRRS---------IDGREKLE-RPEIRPSRTTAPAE 707
Query: 538 SFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR 597
S K +E ++ RN + +S++S + Q+ L+ S + P S S +VP
Sbjct: 708 SVKYTEVKAARN---DMRASQISSL----LQFKDLSFS-ALQPTAMSPAVTMSPAVPALS 759
Query: 598 IVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
PSP T +P PK +D+ +++N+ L+QE++KL++QV
Sbjct: 760 T-----------PSPYTKKTKSPAPAIPQFPKTDIDNLQKSNELLNQEMLKLQSQV 804
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/655 (54%), Positives = 459/655 (70%), Gaps = 24/655 (3%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLG-GGLNRVGSCFG 59
M + D+ R+S+SSA SSSSQGSG DD ++LGDV++WGE D + G N + S
Sbjct: 171 MLRASTDSSRLSISSAPSSSSQGSGQDDIESLGDVYVWGEVWTDMIPAEGSANYLCS--- 227
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
K D +PK LES VVLDVQ IACG RH AL +QGEVF+WGEE GGRLGHG D+D+ P
Sbjct: 228 -KADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRP 286
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
KL++AL+ N+E VACGE+HTCA+T SGDLYTWGDG YN GLLGHG SHW+PKRV+GP
Sbjct: 287 KLVEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGP 346
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
LEG+ V S+SCG WH+A+ TS+G++FTFGDGTFG LGHG+R +V+ P+EVE+L G RT++
Sbjct: 347 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRTIK 406
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG+WH+AA+VE N + N S KLFTWG GDK LGHGDK+A+LVPTCV +L++
Sbjct: 407 VACGLWHSAAIVETT--NQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDY 464
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
NF +VACGHS+T+AL+TSGHV+TMGS GQLGNP++DGK P V+ +L+ VEEI+CG
Sbjct: 465 NFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEISCG 524
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
S HVAVLTS++EVYTWG GANGRLGHG +D+ P+LVEALKD+ VKSIACG+NFT IC
Sbjct: 525 SCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCIC 584
Query: 420 LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 479
+HKWVSG DQS+CSGCR PF F RKRHNCYNCGLV CH+CSSKK LKA++AP P KP+R
Sbjct: 585 IHKWVSGADQSVCSGCRQPF-GFTRKRHNCYNCGLVHCHACSSKKVLKAALAPTPGKPHR 643
Query: 480 VCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESF 539
VCD+CF KL+ + SS+SS S+R +I + + D+ E+ + RS ++L S+ E
Sbjct: 644 VCDSCFMKLKA---AETSSNSSHSKRNAIARRSVDSKDRSERPEIRS-SRLATGSTAEPL 699
Query: 540 KQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPM-FGSSKKFFSASVPGSRI 598
KQ+E ++ RN+ + P P + + + FN + FG++ F +
Sbjct: 700 KQAELKAVRNE--------IKPDPMSTMRAPQVPSMLPFNNLAFGAT---FGGPASLKPM 748
Query: 599 VSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
P + PTP K D+ K L++++ KL++QV
Sbjct: 749 TMAPMPMAMPMSPAPLTKKPTPAAATPLCGKSDTDNLKMAKQVLNEDISKLQSQV 803
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/569 (58%), Positives = 422/569 (74%), Gaps = 14/569 (2%)
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
RH+A+V +QGEVF+WGEE+GGRLG G+ DV P+L++AL+ ++LVACGE+HTCAVT+
Sbjct: 247 RHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G+LYTWGDG +N GLLG+G +VSHW+PKR++G LEG+ V+ ++CGPWHTA+++S GQLF
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
TFGDGTFGVLGHGD+ S+S PREV+SL GLRT+ ACGVWHTAAVVEV++ SS+S S
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTS-IPS 425
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
GKLFTWGDGDK RLGHGDKE +L PTCV AL++ NF ++ACGHS+T+ LTTSG V+T+GS
Sbjct: 426 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS 485
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
VYGQLGNP ADGK P VE KL EE+ACG+YHV VLTSK EVYTWGKGANGRLGH
Sbjct: 486 SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGH 545
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRK 445
GD +DR SP+LVE+LKDK VK IACG+N++AAICLHK +SG +QS CS CR F F RK
Sbjct: 546 GDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAF-GFTRK 604
Query: 446 RHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRR 505
RHNCYNCGLV CHSCSSKK+L+A++AP P K YRVCD+C+ KL K ++ GS++ R+
Sbjct: 605 RHNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSES-GSNY----RK 659
Query: 506 GSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNG 565
++ + E DK +K D+R T S+M+ KQ + ++ + K + V P
Sbjct: 660 NAVPRLSGENRDKLDKSDTRPPK--TALSNMDLIKQLDSKAAKQGKRTDTFAVVRPTQAH 717
Query: 566 SSQWGALNISKSFNPMFGSSKKFFSASVPGSR-IVSRATSPISRRPSPPRSTTPTPTLGG 624
S L + P ++ +P + + SR+ SP+SRR SPPRS TP PT G
Sbjct: 718 S----LLQLKDGPIPNTVDIRRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASG 773
Query: 625 LTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
L+ K + D K+TN+ L+QEV+ LRAQV
Sbjct: 774 LSFSKGIADSLKKTNELLNQEVLMLRAQV 802
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 153/297 (51%), Gaps = 41/297 (13%)
Query: 33 GDVFIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAAL 90
G+++ WG+G + G+LG G + + +PK + + L V +ACG H AL
Sbjct: 308 GELYTWGDGVHNAGLLGNGTD---------VSHWMPKRISGILEGLQVAYVACGPWHTAL 358
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL----- 145
++ G++F++G+ + G LGHG + +P+ +D+L+ + VACG +HT AV
Sbjct: 359 ISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQ 418
Query: 146 ------SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
SG L+TWGDG N LGHG++ P V ++ + I+CG T +T
Sbjct: 419 SSTSIPSGKLFTWGDGDKN--RLGHGDKEPRLKPTCVPALID-YNFHKIACGHSITIGLT 475
Query: 200 SAGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
++GQ+FT G +G LG H D K + + L G ACG +H VMV
Sbjct: 476 TSGQVFTVGSSVYGQLGNPHADGKQPCLVE--DKLLGESAEEVACGAYH------VMVLT 527
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
S + +++TWG G GRLGHGD E + PT V +L + + +ACG + + A+
Sbjct: 528 SKN------EVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
+ +ACG H ++ + EV++WG+ + GRLGHG D P L+++L + +++++ACG
Sbjct: 514 EEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSN 573
Query: 139 HTCAVTLSGDL 149
++ A+ L L
Sbjct: 574 YSAAICLHKSL 584
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/653 (54%), Positives = 462/653 (70%), Gaps = 32/653 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K ++ D RVS SSA S+SS GS DD D+ GDV++WGE + + G + V V+
Sbjct: 19 KGVSSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICENSVRAGSDAVIRST-VR 77
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LPK LES +VLDV ++ CG +HAALV K GEVF+WGEESGGRLGHG D +HP L
Sbjct: 78 HDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSL 137
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L+ N++ VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG ++SHW+PKR++G LE
Sbjct: 138 VESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALE 197
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G V+ +SCG WHTA++TS GQLFTFGDGTFGVLGHG+R+S+ PREVESL GL+T+ A
Sbjct: 198 GQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPCPREVESLSGLKTIAVA 257
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAAVVEV+V SSS+ SSGKLFTWGDGDK RLGHGDKE ++ PTCVA+L++ +F
Sbjct: 258 CGVWHTAAVVEVIV-TQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDF 316
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
R+ACGHSLTV LTTSG V+ MG+ VYGQLGNP++DGKLP VE + ++ V ++ACGSY
Sbjct: 317 HRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKLPCLVEDIMGENVV-QVACGSY 375
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLT K+EV+TWGKGANGRLGHGD +DR P+LVE L+D+ V+ IACG NFTAAIC
Sbjct: 376 HVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTAAICQR 435
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KW+SG +QS C+ CR PF F RKRHNC+NCG V C++C+S+K L+A++APNP KPYRVC
Sbjct: 436 KWMSGAEQSQCASCRQPF-GFTRKRHNCHNCGHVHCNACTSRKVLRAALAPNPAKPYRVC 494
Query: 482 DNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQ 541
D+CF KL D+ S+V++R + + D KL A+ S+++ +
Sbjct: 495 DSCFLKLNNAIDS-----SAVNKRKEAVPRHSGESNTDAKL-----AKAIIPSNLDMIRS 544
Query: 542 SEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVS 600
+ + +K+ KK + S +P N Q + +S F+ + P + V
Sbjct: 545 LDSKAAKQGKKTDALSFLRNPQMNSLLQLRDIALSGGFD-----------LNRPVQKTVR 593
Query: 601 RATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+P R PSPPRSTTPT GL+ K D+ + N+ L+QEV +LR QV
Sbjct: 594 ---TPAVRSPSPPRSTTPTH---GLSIAKSATDNLTKKNEMLNQEVERLRGQV 640
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 156/346 (45%), Gaps = 46/346 (13%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA---VTLSGDLYTWG 153
+ SWG ++ GV SDV+ ++ H A SGD+Y WG
Sbjct: 6 IVSWGSDATDMPTKGVSSDVI---------RVSTSSAPSTSSHGSAQDDCDSSGDVYVWG 56
Query: 154 DGTYNFGLLGHGNEVSHWVPKR---VNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTF 207
+ + + V + + PLE + V + CG H A+VT G++FT+
Sbjct: 57 EVICENSVRAGSDAVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTW 116
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+ + G LGHG R+ P VESL ACG +HT AV ++G+
Sbjct: 117 GEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVT------------TAGE 164
Query: 268 LFTWGDG--DKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMG 324
L+TWGDG + G LGHG + +P ++ +E V+CG T +T++G ++T G
Sbjct: 165 LYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFG 224
Query: 325 SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-----------EV 372
+G LG+ + P VE LS +ACG +H A + ++
Sbjct: 225 DGTFGVLGHGNRESIPCPREVE-SLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKL 283
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+TWG G RLGHGD + R P+ V +L D IACG + T +
Sbjct: 284 FTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGL 329
>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/657 (53%), Positives = 457/657 (69%), Gaps = 38/657 (5%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D FR+S+SS S SS GSG DD ++LGDV+IWGE D V G G+ F D +
Sbjct: 198 DGFRISVSSTPSVSSLGSGPDDIESLGDVYIWGEVWADAVAPDG---NGTQFPSTTDVLV 254
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK LES+VVLDV IA G RH ALV +QGEVF+WGEESGGRLGHG+D D P+L++ L+
Sbjct: 255 PKPLESSVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLA 314
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
N+E VACGE HTCAV++S +L++WGDG YN GLLGHG +VSHWVPKR+NGPLEG+ V
Sbjct: 315 VTNVESVACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVI 374
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
SI+CG WH+A+ TS G+LFTFGDGTFGVLGHG+R+SV+ P+EV+ L GL+T+ ACGVWH
Sbjct: 375 SIACGTWHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWH 434
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAA+VEV S SN SS KLFTWGDGDK RLGHG+KE L PTCV+ L+E NF ++AC
Sbjct: 435 TAAIVEVTF--QSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIAC 492
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
GH++T+ALTTSGH++TMG +GQLGN +DGK+P V+ L FVEEI+CG++HVA L
Sbjct: 493 GHTMTIALTTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAAL 552
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
TS++E+YTWGKGANGRLGHGD DDR SP+LVEALK++ VK+I+CG++FT+ IC+HKWVSG
Sbjct: 553 TSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFTSCICIHKWVSG 612
Query: 427 VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFN 486
VDQS C+GCR PF F RKRHNCYNCGLV CH CSS+K +KA++AP P KP+RVCD+C+
Sbjct: 613 VDQSTCTGCRQPF-GFTRKRHNCYNCGLVHCHGCSSRKVMKAALAPTPGKPHRVCDSCYT 671
Query: 487 KLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTR-----FSSMESFKQ 541
KL+ + ++ S+++R+ +I Q P ID ++ + T+ FS E K
Sbjct: 672 KLKA---VEANAASNLNRKVTITQ-PRSSIDGRDRYGQGETVRSTKILFPPFS--EPLKY 725
Query: 542 SEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSR 601
E R+ NK + S IP +I++ + F SS ++S+
Sbjct: 726 LEMRT--NKLGNSSMLPTSQIP---------SIAQMKDMSFPSS----TSSIQNGLKYPL 770
Query: 602 ATSPISRRPSPPRSTTPTPTLGGLTS------PKIVVDDAKRTNDSLSQEVIKLRAQ 652
A +P S P RS +P + ++D K+TN+ L+Q+V KL+ Q
Sbjct: 771 APNPPSTPPLNARSVSPYARRPSPPRSSSPGFSRSIIDSMKKTNELLNQQVSKLQNQ 827
>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 1106
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/489 (63%), Positives = 394/489 (80%), Gaps = 6/489 (1%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M + D FR+S+SS S S+ SG DD ++LGDV++WGE DG+ G V + V
Sbjct: 198 MLRPSTDGFRISVSSTPSCSTGTSGPDDIESLGDVYVWGEVWSDGISPDG---VVNSTTV 254
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+D +PK LES VVLDV IACG RH ALV +QGEVF+W EE+GGRLGHG+ DV PK
Sbjct: 255 KIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPK 314
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++ L+ NI+ VACGEYHTCAV+ SGDL+TWGDG +N GLLGHG+++SHW+PKRV+GP+
Sbjct: 315 LVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPV 374
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ T+ G+LFTFGDG FGVLGHGDR+SVS P+EV+ L GL+T++
Sbjct: 375 EGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKV 434
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWHT A+VEVM N + ++ SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ N
Sbjct: 435 ACGVWHTVAIVEVM--NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYN 492
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH+ TVALTTSGHV+TMG +GQLG+ +DGKLP V+ +L FVEEI+CG
Sbjct: 493 FNQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGD 552
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+HVAVLTS++EV+TWGKG+NGRLGHGD DDR +P+LVEAL+++ VKSI+CG+NFT++IC+
Sbjct: 553 HHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSICI 612
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RV
Sbjct: 613 HKWVSGADQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRV 671
Query: 481 CDNCFNKLR 489
CD C+ KL+
Sbjct: 672 CDACYTKLK 680
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/650 (54%), Positives = 459/650 (70%), Gaps = 20/650 (3%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D R+SLSSAVS+SS GS H+D DALGDVF+WGE DGVL G N + S D L
Sbjct: 221 DPIRLSLSSAVSTSSHGSYHEDFDALGDVFVWGESICDGVLTGTGNSLNS---TTEDVLL 277
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PKALES +VLD QNIACG HA LV KQGE+FSWGE GG+LGHG+++DV PK I ++
Sbjct: 278 PKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVR 337
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ + +ACG++HTCA+T SGDLY+WGDGT+N LLGHGNE S W+PKRV G L+G++VS
Sbjct: 338 GLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVS 397
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CGPWHTAVV S+GQLFTFGDG+FG LGHGDR+S S+PREV+ L GL + ACGVWH
Sbjct: 398 YVACGPWHTAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWH 457
Query: 247 TAAVVEVMVGNSSSSNCSS-GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
TAA+VEV S + SS G++FTWGDG+KG+LGHGD +A+L+P CV +L N C+VA
Sbjct: 458 TAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVA 517
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
CGHSLTV+LT++GHVYTMGS YGQLGNP A G P RVEG + ++ VEEIACGSYHVAV
Sbjct: 518 CGHSLTVSLTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAV 577
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
LTSK+E+YTWGKG NG+LGHG +++ P++V LK+KQVK+I CG+NFTA IC+HKWV
Sbjct: 578 LTSKSEIYTWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVICVHKWVP 637
Query: 426 GVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCF 485
G + S+C+GCR PF NF+RKRHNCYNCGLVFC CSS+KSL+A++AP+ NKPYRVC CF
Sbjct: 638 GSEHSLCAGCRNPF-NFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCF 696
Query: 486 NKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGR 545
KL+K+ + S+ +S +R+ +N + + + + L + + R SS +S R
Sbjct: 697 TKLKKSREPSTSTPTSRARK-LLNMRKSTDVSERDSLTQKFLSAHARISSADSLLHYGER 755
Query: 546 S--KRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRAT 603
+R+ K E N+S V P NGS Q +SK + K +PGS + SR T
Sbjct: 756 RHHRRDLKPEVNNSNVFPSMNGSLQLVGSPLSKGSTALPKIPKNMM-VKIPGSGMSSRTT 814
Query: 604 SPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SP+S + + PR S ++ ++K+ DS + ++ L+ QV
Sbjct: 815 SPVSVKSTSPRR-----------SYEVAAAESKQIKDSFNHDMAGLKEQV 853
>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1043
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/667 (52%), Positives = 468/667 (70%), Gaps = 41/667 (6%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
M + D FR+S+SS S SS GSG DD ++LGDV++WGE +G+L G S V
Sbjct: 179 MLRPSTDGFRISVSSTPSCSSGGSGPDDIESLGDVYVWGEVWTEGILPDG---TVSKETV 235
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K D P+ LES VVLDV I CG RH ALV +QGEVF+WGEE GGRLGHG+ D+ PK
Sbjct: 236 KTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPK 295
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L++ L+ NI+ VACGEYHTC V+ SGDL++WGDG +N GLLGHG+++SHW+PKRV+GPL
Sbjct: 296 LVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPL 355
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ T+ G+LFTFGDG FGVLGHG+R+SVS P+EV+SL GL+TV+
Sbjct: 356 EGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKV 415
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
AC +WHTAA+VEVM + ++ SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ N
Sbjct: 416 ACSIWHTAAIVEVM--GQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYN 473
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH+ TVALTTSGHV+TMG +GQLGN +DGKLP V+ +L FVEEIACG
Sbjct: 474 FHKIACGHTFTVALTTSGHVFTMGGTAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGD 533
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+HVAVLTS++EV+TWGKGANGRLGHGDT+D+ +P+ VEAL+D+ VKS++CG+NFT++IC+
Sbjct: 534 HHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCGSNFTSSICI 593
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RV
Sbjct: 594 HKWVSGADQSICSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRV 652
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSS-MESF 539
CD C++KL+ + S+V+R + P ID RS + TR S + S
Sbjct: 653 CDACYSKLKA---AESGYSSNVNRNVAT---PGRSIDG----SVRSDKETTRSSKVLLSA 702
Query: 540 KQSEGRSKRNKKLEFNSS--RVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR 597
+ RS L +SS R S +P+ Q + S + + + K + + R
Sbjct: 703 NTNSVRSSSRPGLTPDSSNARASQVPS-LQQLKDIAFPSSLSAIQNAFKPVIAPTTTPPR 761
Query: 598 IV------------SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQE 645
+ R++SP +RR SPPR++ G + + V+D K+TN+ ++QE
Sbjct: 762 PLVVGPSSPSPPPPPRSSSPYARRTSPPRTS-------GFS--RSVIDSLKKTNEVMNQE 812
Query: 646 VIKLRAQ 652
+ KL++Q
Sbjct: 813 MTKLQSQ 819
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/658 (54%), Positives = 464/658 (70%), Gaps = 30/658 (4%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLG-GGLNRVGSCFG 59
M + D+ R+S+SSA SSSSQGSG DD ++LGDV++WGE D + G N + S
Sbjct: 183 MLRASTDSSRLSISSAPSSSSQGSGQDDIESLGDVYVWGEVWTDVIPAEGSTNYLCS--- 239
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
K D +PK LES VVLDVQ IACG RH AL +QGEVF+WGEE GGRLGHG D+D+ P
Sbjct: 240 -KADILIPKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRP 298
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
KL++AL+ N+E +ACGE+HTCAVT SGDLYTWGDG YN GLLG+G SHW+PKRV+GP
Sbjct: 299 KLVEALAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGP 358
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
LEG+ V S+SCG WH+A+ TS+G++FTFGDGTFG LGHG R++V P+EVE+L G RT++
Sbjct: 359 LEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRTMK 418
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG+WH+AA+VE N S N S KL+TWG GDK +LGHGDK+++LVPTCV +L++
Sbjct: 419 VACGLWHSAAIVE--SSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDY 476
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
+F +VACGHS+T+AL+TSGHV+TMGS GQLGNP++DGK P V+ +LS VEEI+CG
Sbjct: 477 SFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDRLSGELVEEISCG 536
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
S HVAVLTS++EVYTWG GANGRLGHG +D+ P+LVEALKD+ VKSIACG+NFT IC
Sbjct: 537 SCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCIC 596
Query: 420 LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYR 479
+HKWVSG DQS+CSGCR PF F RKRHNCYNCGLV CH+CSS+K LKA++AP P KP+R
Sbjct: 597 IHKWVSGADQSVCSGCRQPF-GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHR 655
Query: 480 VCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESF 539
VCD+CF KL+ D S++SS +R +I + + D+ E+ + R ++L S+ E
Sbjct: 656 VCDSCFMKLKA---ADTSNNSSHGKRNAIARRSVDSKDRSERPEIRP-SRLATGSTAEPL 711
Query: 540 KQSEGRSKRN--KKLEFNSSRVSPIPNGSSQWGALNISK-SFNPMFGSSKKF-FSASVPG 595
KQ+E + RN K ++ R +P+ L + +F FG P
Sbjct: 712 KQAEIKPVRNEIKPDPMSTMRAPQVPS------VLPFNNLAFGATFGGPASLKPMVMAPM 765
Query: 596 SRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ + SP++++P PP T TP G K D+ K L++++ KL++QV
Sbjct: 766 PMAMPMSQSPLTKKPCPP---TTTPLCG-----KSETDNLKIAKQVLNEDIAKLQSQV 815
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/656 (54%), Positives = 456/656 (69%), Gaps = 20/656 (3%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++A D RVS+SSA SSSSQ SG DD ++LGDV++WGE + + G +
Sbjct: 189 LRASTGDNSRVSISSAPSSSSQSSGLDDIESLGDVYVWGEVWTEVLPSEGSSNY---LCS 245
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K D +PK LES VVLDVQ IACG RH L +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 246 KTDFLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 305
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++L+ N+E +ACGE+HTC VT SGDLY WGDG+YN GLLGHG VSHW+PKRV+GPL
Sbjct: 306 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 365
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ S+G+LFTFGDGTFG LGHGDR+SV+ P+EVE+L G R ++
Sbjct: 366 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 425
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWH+AA+VE + +S+N S KLFTWGDGDK RLGHGDKEAKLVPTCV ALV+ N
Sbjct: 426 ACGVWHSAAIVE--ISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHN 483
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F +VACGHS+TVAL TSGHV+TMGS GQLGNP+ADGK P V+ KL VEEI+CGS
Sbjct: 484 FHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGS 543
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HVA LTS++EVYTWG GANGRLGHG +D+ P+LV+ALKD+ VKSI+CG+NFT IC+
Sbjct: 544 NHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICI 603
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR PF F RKRHNCYNCGLV CH+CSS+K LKA++AP P KP+RV
Sbjct: 604 HKWVSGADQSVCSGCRQPF-GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRV 662
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+CF KL+ D SS ++R I + + DK E+ + R ++L S E K
Sbjct: 663 CDSCFMKLKA---ADTGVISSYNKRNVITRRSIDIKDKLERPEIRP-SRLATTSPAEPVK 718
Query: 541 QSEGRSKRNKKL---EFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR 597
E ++ RN+ + + S +P Q+ + +F FG+ + G +
Sbjct: 719 YQETKNVRNETKPADPMSMMKASQVP-AMLQFKDM----AFAGTFGTVPTTVKSMTMGGQ 773
Query: 598 IVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ + P+ P + +P P K+ D K+TN+ L+Q++ KL++QV
Sbjct: 774 M--QMGMPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQV 827
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/656 (54%), Positives = 456/656 (69%), Gaps = 20/656 (3%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++A D RVS+SSA SSSSQ SG DD ++LGDV++WGE + + G +
Sbjct: 203 LRASTGDNSRVSISSAPSSSSQSSGLDDIESLGDVYVWGEVWTEVLPSEGSSNY---LCS 259
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K D +PK LES VVLDVQ IACG RH L +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 260 KTDFLIPKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 319
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++L+ N+E +ACGE+HTC VT SGDLY WGDG+YN GLLGHG VSHW+PKRV+GPL
Sbjct: 320 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 379
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ S+G+LFTFGDGTFG LGHGDR+SV+ P+EVE+L G R ++
Sbjct: 380 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 439
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWH+AA+VE + +S+N S KLFTWGDGDK RLGHGDKEAKLVPTCV ALV+ N
Sbjct: 440 ACGVWHSAAIVE--ISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHN 497
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F +VACGHS+TVAL TSGHV+TMGS GQLGNP+ADGK P V+ KL VEEI+CGS
Sbjct: 498 FHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGS 557
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HVA LTS++EVYTWG GANGRLGHG +D+ P+LV+ALKD+ VKSI+CG+NFT IC+
Sbjct: 558 NHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICI 617
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR PF F RKRHNCYNCGLV CH+CSS+K LKA++AP P KP+RV
Sbjct: 618 HKWVSGADQSVCSGCRQPF-GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRV 676
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+CF KL+ D SS ++R I + + DK E+ + R ++L S E K
Sbjct: 677 CDSCFMKLKA---ADTGVISSYNKRNVITRRSIDIKDKLERPEIRP-SRLATTSPAEPVK 732
Query: 541 QSEGRSKRNKKL---EFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR 597
E ++ RN+ + + S +P Q+ + +F FG+ + G +
Sbjct: 733 YQETKNVRNETKPADPMSMMKASQVP-AMLQFKDM----AFAGTFGTVPTTVKSMTMGGQ 787
Query: 598 IVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ + P+ P + +P P K+ D K+TN+ L+Q++ KL++QV
Sbjct: 788 M--QMGMPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQV 841
>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1080
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/656 (54%), Positives = 456/656 (69%), Gaps = 38/656 (5%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D RVS+SS +SS SG DD ++LGDVFIWGE +G GL GS K+D +
Sbjct: 197 DGSRVSVSSTNYASSVVSGPDDIESLGDVFIWGEVWAEGNSSDGL---GSQVPSKIDMLI 253
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK LES VVLDV I G H ALV +QGE+F+WGE+SGGRLGHG D D P+L+D+L+
Sbjct: 254 PKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLA 313
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
++ VACGEYHTCAV++SGDLYTWGDGT+N G+LGHG +VSH +PKRV GPLEG V
Sbjct: 314 ITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVV 373
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
SI+CG WHTA++TS G+LFTFGDGT GVLGHGDR+SV+ P+E++ L G + V+ ACGVWH
Sbjct: 374 SIACGAWHTALITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWH 433
Query: 247 TAAVVEVM-VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
TAA++EV SSS+ SS KLFTWGDGD+ RLGH +KE L PTCVAAL + NF +VA
Sbjct: 434 TAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVA 493
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
CGHSLTVALT SGHV+TMGS YGQLGNP +DGK+P V KL VEEI+CG++HVAV
Sbjct: 494 CGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAV 553
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
LTS++E+YTWG+GANGRLGHGD +D+ +P LVEALK++ VK+IACG NFT IC+HKWVS
Sbjct: 554 LTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCICIHKWVS 613
Query: 426 GVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCF 485
G DQS+CSGCR PF F RKRHNCY+CGLV+CH CSSKK+LKA++AP P+KP+RVCD C+
Sbjct: 614 GNDQSVCSGCRQPF-GFTRKRHNCYHCGLVYCHPCSSKKALKAALAPTPSKPHRVCDACY 672
Query: 486 NKLRKTFDTDGSS-HSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEG 544
KL+ +++ S + ++R S G +K E+++ R L SS +S G
Sbjct: 673 AKLKGCENSNASHFNKEITRPSSSVYGR----EKTERVEVRPSKFL--LSSATCLVKSLG 726
Query: 545 RSKRNKKLEFNSSRVSPI----PNGSSQWG--ALNISKSFNPMFGSSKKFFSASVPGSRI 598
+ + + ++ ++ I P+ ++Q AL + +S P P
Sbjct: 727 STHESSSMAGDALQLKDIIFPGPSSATQKASRALIMQQSQAP------------TPPPSA 774
Query: 599 VSRATSPISRR-PSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SR SP SRR PSP RS +P G + + ++D K+ N+ L+QEV KL+ +
Sbjct: 775 NSRPASPYSRRPPSPTRSVSP-----GFS--RSLIDSLKKKNEHLNQEVSKLQNHI 823
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/538 (60%), Positives = 416/538 (77%), Gaps = 16/538 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K+ + RVS+SSA+S+SS GSG +D ++ GDV++WGE D G + G
Sbjct: 188 VKSASSSDIRVSVSSALSTSSHGSG-EDSESFGDVYVWGEVMCDTTSRSGSDGNVHGPGA 246
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D +PK LES V+LDV +ACG +HAAL+ +Q EVF+WGEE GRLGHG + + P+
Sbjct: 247 TTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPR 306
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS N+E++ACGE+HTCAVT +GDLYTWGDGT+N GLLGHG+ VSHW+PKRV+GPL
Sbjct: 307 LLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPL 366
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ VS++SCG WHTA++TS+GQL+TFGDGTFG LGHG+R+++S P+EVESLKGLRT+
Sbjct: 367 EGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTISV 426
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CGVWH+AAVVEV++ + SN SSGKLFTWGDGDK RLGHGD+ AKL PTCV +L++ N
Sbjct: 427 SCGVWHSAAVVEVIM---TQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYN 483
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F + ACGH+LT+ LTTSGH++T+GS VYGQLGNP DG+ P VE K+ V E+ACGS
Sbjct: 484 FHKSACGHTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRYPRLVEDKVGGGGVVEVACGS 543
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
YHVAVLT+ EVYTWGKGANGRLGHGD DR P+LVEAL+D+ VK IACG++FTAAI
Sbjct: 544 YHVAVLTNTGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRIACGSSFTAAISQ 603
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSGV+QS CS CR PF F RKRHNCYNCGLV CHSCSSKK+L+A+++PNP KPYRV
Sbjct: 604 HKWVSGVEQSQCSACRQPF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRV 662
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMES 538
CD+C+ KL K D+ G S+S R +I + P + K E++D+++ TR +S S
Sbjct: 663 CDSCYMKLSKVLDS-GVSYS----RNTIPRIPGD--TKAERMDTKA----TRVASATS 709
>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
Length = 1056
Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/630 (52%), Positives = 438/630 (69%), Gaps = 25/630 (3%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
DD ++LGDV++WGE D G + SC K+D +PK LES VVLDV I CG R
Sbjct: 211 DDIESLGDVYVWGEVWTDAAPSDG-HTTSSC--SKVDVLIPKPLESDVVLDVNQIVCGSR 267
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H AL +QGEVF+WGEE GGRLGHG D+D+ PKL++++S ++ ++CGE+HTCA++ S
Sbjct: 268 HIALTTRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHTCAISAS 327
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDL+ WGDG+Y+ GLLG+ SHW+PKRV+GPLEG+ V ++CG WH+A++TS G+L+T
Sbjct: 328 GDLFNWGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHSALITSTGRLYT 387
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FGDGTFG LGHG+R+S + P+EVE+L G RT++ ACGVWH+AA+VE V + N S
Sbjct: 388 FGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAIVEATV--QTGMNMVSK 445
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KL+TWGDGDK RLG GDKEA+L+PTCV AL+E NF ++ACG ++TVAL TSGHVYTMGS
Sbjct: 446 KLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATSGHVYTMGSS 505
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLGNP++DGK P V+ KL+ VEEI+CG+ HVAVLTS++EVYTWG GANGRLGHG
Sbjct: 506 DNGQLGNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSRSEVYTWGMGANGRLGHG 565
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
D +D+ +P++VEALKD+ VKSI+CG+NFT IC+HKWVSG DQS+C+GCR F F RKR
Sbjct: 566 DLNDKKAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAF-GFTRKR 624
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRG 506
HNCYNCGLV CH+CSS+K LKA++AP P KP+RVCD+CF KL K DT + S+ +RR
Sbjct: 625 HNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKL-KNADT---TTSNANRR- 679
Query: 507 SINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGS 566
N ID EK + R +L S E K E + +N +S + +
Sbjct: 680 --NAATRRSIDSREKPEIRP-PRLVATPSAEPVKYMEVKVAKNDMKSADSIMKASQASAL 736
Query: 567 SQWGALNISKSF---NPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLG 623
Q+ L + F PM S S ++P S V+ ++ + SPP S P
Sbjct: 737 LQFKDLGFAAQFGGLQPMGMSPSVAISPAIP-SFSVAPPSAYTKKAKSPPASAIP----- 790
Query: 624 GLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S K+ VD +++ND L+QE+++L++QV
Sbjct: 791 --QSCKVDVDHLQKSNDLLNQELLRLQSQV 818
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/486 (63%), Positives = 384/486 (79%), Gaps = 5/486 (1%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
R+S+SSA+S+SS GSG DD ++ GDV++WGE D G + D +PK
Sbjct: 195 IRISVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPK 253
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
LES V+LDV +ACG +HAALV +Q EVF+WGEE GRLGHG + + P+L+++LS
Sbjct: 254 PLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSIC 313
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
N+E +ACGE+HTCA+T +GDLYTWGDGT+N GLLGHG+ VSHW+PKRV+GPLEG+ VS++
Sbjct: 314 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 373
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
SCG WHTA++TS+G+L+TFGDGTFGVLGHG+R+++S P+EVESLKGLRT+ +CGVWHTA
Sbjct: 374 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTA 433
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
AVVEV++ + SN SSGKLFTWGDGDK RLGHGD+ +KL PTCV +L++ NF + CGH
Sbjct: 434 AVVEVIM---AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGH 490
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+LT+ LTTSGH++T GS VYGQLGNP DG+ P VE KL V E+ACG+YHVAVLT
Sbjct: 491 TLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQ 550
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
EVYTWGKGANGRLGHGD DR +P+ VEAL+D+ VK IACG+ FTAAIC HK VSG++
Sbjct: 551 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGME 610
Query: 429 QSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
QS CS CR PF F RKRHNCYNCGLV CHSCSSKK+L+A+++PNP KPYRVCD+C+ KL
Sbjct: 611 QSQCSSCRQPF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKL 669
Query: 489 RKTFDT 494
K D+
Sbjct: 670 SKVLDS 675
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/545 (58%), Positives = 420/545 (77%), Gaps = 13/545 (2%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ A D+ RVS+SSA+SS SQGSG DD ++LGDV++WGE D G + SC
Sbjct: 184 IRTSAADSSRVSISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDG-HTSSSC--S 240
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+D +PK LES VVLDV IACG RH AL +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 241 KVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS ++L++CGE+HTCAVT SGDL+ WGDG+YN GLLG G EVS+W+PK+V+GPL
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ TS+G+L+TFGDGTFGVLGHGDR++++ P+EVE+L G +T++
Sbjct: 361 EGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKV 420
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACG+WH+AA+VEV N + +N S KL+TWGDGDK RLGHGDKE +LVP CV AL+E N
Sbjct: 421 ACGIWHSAAIVEVT--NQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYN 478
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH++TVAL TSG V+TMGS GQLGNP++DGK P V+ +L+ VEEI+CG+
Sbjct: 479 FHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGA 538
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HV VLTS++EVYTWG GANGRLGHGD DR P LVEALKD+ VKSI+CG+NFT IC+
Sbjct: 539 SHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICI 598
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+C+GCR F F RKRH+CYNCGLV CH+CSS+K LKA++AP P KP+RV
Sbjct: 599 HKWVSGADQSVCTGCRQAF-GFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRV 657
Query: 481 CDNCFNKLR--KTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSR--AQLTRFSSM 536
CD+CF KL+ +T + + ++V+RR SI+ E +++ E SR+ A+ +++ +
Sbjct: 658 CDSCFLKLKAAETGSNNSNRRNAVTRR-SID--GREKLERPEIRPSRTTAPAESVKYTEV 714
Query: 537 ESFKQ 541
+S KQ
Sbjct: 715 DSLKQ 719
>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1054
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/657 (52%), Positives = 453/657 (68%), Gaps = 27/657 (4%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ D+ R+S+SSA SSSSQGSG DD ++LGDV++WGE D G + SC
Sbjct: 184 IRTSGADSTRLSISSAPSSSSQGSGTDDIESLGDVYVWGEVWTDAAPSDG-HTSSSC--S 240
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+D +PK LES VVLDV I CG RH AL +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 241 KVDVLIPKPLESDVVLDVNQIVCGSRHVALTTRQGEVFTWGEELGGRLGHGTDTDISRPK 300
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS ++ ++CGE+HTCA++ SGDL+ WGDG+Y GLLG+ SHW+PKRV+GPL
Sbjct: 301 LVESLSVTIVDFISCGEFHTCAISASGDLFNWGDGSYRAGLLGYDTGASHWLPKRVSGPL 360
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A++TS G+L+TFGDG FG LGHG+R+S + P+EVE+L G RTV+
Sbjct: 361 EGLQVLSVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKV 420
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWH+AA+VE V + N S KL+TWGDGDK RLG GDKEA+L+PTC+ AL+E N
Sbjct: 421 ACGVWHSAAIVEASV--QTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHN 478
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ CG ++TVAL TSGHVYTMGS GQLGNP++DGK P V+ KL+ VEEI+CG+
Sbjct: 479 FHQLGCGQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKHPCLVKDKLANELVEEISCGA 538
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HVAVLTS++EVYTWG GANGRLGHGD +D+ +P++VEALKD+ VKSI+CG+NFT IC+
Sbjct: 539 AHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCGSNFTTCICI 598
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
H+WVSG DQS+C+GCR F F RKRHNCYNCGLV CH+CSS+K LKA++AP P KP+RV
Sbjct: 599 HRWVSGADQSVCTGCRQAF-GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRV 657
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+CF KL K DT S S+ +RR N D EK + R +L S E K
Sbjct: 658 CDSCFLKL-KNADT---SSSNANRR---NAATRRSTDSREKPEIRP-PRLVATPSAEPGK 709
Query: 541 QSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSF---NPMFGSSKKFFSASVPGSR 597
E ++ ++ +S + + Q+ L F PM S ++P
Sbjct: 710 YMEVKASKSDMKPADSIMKASQASALLQFKDLGFGAQFGGLQPMGMPPALAMSPAIPAFS 769
Query: 598 IVSRATSPISRR-PSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ SP +++ SPP S P S K+ VD +++ND L+QEV+KL++QV
Sbjct: 770 LA--PPSPYTKKMKSPPTSAIP-------QSSKVDVDHLQKSNDLLNQEVLKLQSQV 817
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/486 (63%), Positives = 383/486 (78%), Gaps = 5/486 (1%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
R+S+SSA+S+SS GSG DD ++ GDV++WGE D G + D +PK
Sbjct: 220 IRISVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPK 278
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
LES V+LDV +ACG +HAALV +Q EVF+WGEE GRLGHG + + P+L+++LS
Sbjct: 279 PLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSIC 338
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
N+E +ACGE+HTCA+T +GDLYTWGDGT+N GLLGHG+ VSHW+PKRV+GPLEG+ VS++
Sbjct: 339 NVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAV 398
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
SCG WHTA++TS+G+L+TFGDGTFGVLGHG+R+++S P+EVESLKGLRT+ +CGVWHTA
Sbjct: 399 SCGTWHTALITSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTA 458
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
AVVEV++ + SN SSGKLFTWGDGDK RLGHGD+ +KL PTCV +L++ NF + CGH
Sbjct: 459 AVVEVIM---AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGH 515
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+LT+ LTTSGH++T GS VYGQLGNP DG+ P VE KL V E+ CG+YHVAVLT
Sbjct: 516 TLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQ 575
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
EVYTWGKGANGRLGHGD DR +P+ VEAL+D+ VK IACG+ FTAAIC HK VSG++
Sbjct: 576 SGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGME 635
Query: 429 QSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
QS CS CR PF F RKRHNCYNCGLV CHSCSSKK+L+A+++PNP KPYRVCD+C+ KL
Sbjct: 636 QSQCSSCRQPF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKL 694
Query: 489 RKTFDT 494
K D+
Sbjct: 695 SKVLDS 700
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/497 (63%), Positives = 395/497 (79%), Gaps = 4/497 (0%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K + D RVS SSA S+SS GS DD D+ GDV++WGE D + G + V V+
Sbjct: 4 KGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSVRTGSDTVVRST-VR 62
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D PK LES +VLD ++ CG +H+ALV K GEVF+WGEESGGRLGHG D +HP+L
Sbjct: 63 TDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRL 122
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I++L+ N+++VACGE+HTCAVT +G+LYTWGDGT+N GLLGHG +VSHW+PKR+ G LE
Sbjct: 123 IESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALE 182
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V+ +SCG WHTA++T+ GQLFTFGDGTFGVLGHG+R+S+S P+EVESL GL+T+ A
Sbjct: 183 GLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTISVA 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA+VEV+V SSSS SSGKLFTWGDGDK RLGHGDKE +L PTCVA+L++ +F
Sbjct: 243 CGVWHTAAIVEVIVTQSSSSI-SSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDF 301
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
R+ACGHSLTV LTTSG V +MG+ VYGQLGNP++DGK+P VE + ++ V ++ACGSY
Sbjct: 302 HRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVV-QVACGSY 360
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVAVLT K+EV+TWGKGANGRLGHGD +DR P+LVEAL+D+ V+ IACG NFTAAIC H
Sbjct: 361 HVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAICQH 420
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
KWVSG +QS C+ CR PF F RKRHNC+NCGLV C++C+S+K+++A++APNP KPYRVC
Sbjct: 421 KWVSGAEQSQCASCRQPF-GFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRVC 479
Query: 482 DNCFNKLRKTFDTDGSS 498
D+CF KL D+ S
Sbjct: 480 DSCFLKLNNAVDSSAIS 496
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 300/489 (61%), Positives = 378/489 (77%), Gaps = 7/489 (1%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
DD ++LGDV+IWGE DG GL + SC K D PK LES VVLDV I G R
Sbjct: 257 DDIESLGDVYIWGEVWVDGNSSDGLGSLASC---KTDVLTPKPLESDVVLDVHQIGPGDR 313
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H ALV +QGEVF+WGE+SGGRLGHG + D P L+++L+ N+ VACGEYH+CAV+ S
Sbjct: 314 HIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSSS 373
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDL+TWGDGT+ GLLGHG +VS+W+PKRV+GPLEG+ V S++CG WH+A+ TS G+LFT
Sbjct: 374 GDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSALATSNGKLFT 433
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
GDG FGVLGHGDR SV+ P+EV+ L G + ++ ACGVWH+AA++EVM S SN S+
Sbjct: 434 IGDGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVM--GPSGSNTSAK 491
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+LFTWGDGD+ RLGH +KE L PTCVAA+ E NF +VACG+++TVALTTSGHV+TMG
Sbjct: 492 RLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHVFTMGGT 551
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YGQLGNP +DGK+P V GKL FVEEI+CG+ HVAVLTS++E+YTWG+GANGRLGHG
Sbjct: 552 AYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHG 611
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
DTDD+ SP++VEALKD+ +K+I+CG+ FT+ ICLHKWVSGVDQS+CS CR PF F RKR
Sbjct: 612 DTDDQKSPTMVEALKDRHIKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQPF-GFTRKR 670
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRG 506
NCY+CGLV+CH CSSKK+ KA++AP P+KP+RVCD C+ KL+ + D+ + + +SR
Sbjct: 671 RNCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKLKGS-DSASNFNRDISRPS 729
Query: 507 SINQGPNEF 515
S G F
Sbjct: 730 SSIYGRESF 738
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 639 bits (1648), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/656 (51%), Positives = 438/656 (66%), Gaps = 56/656 (8%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++A D RVS+SSA SSSSQ SG DD ++LGDV++WGE
Sbjct: 189 LRASTGDNSRVSISSAPSSSSQSSGLDDIESLGDVYVWGE-------------------- 228
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
IACG RH L +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 229 -------------------QIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 269
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++L+ N+E +ACGE+HTC VT SGDLY WGDG+YN GLLGHG VSHW+PKRV+GPL
Sbjct: 270 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 329
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ S+G+LFTFGDGTFG LGHGDR+SV+ P+EVE+L G R ++
Sbjct: 330 EGLQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGFRAMKV 389
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACGVWH+AA+VE+ +S+N S KLFTWGDGDK RLGHGDKEAKLVPTCV ALV+ N
Sbjct: 390 ACGVWHSAAIVEI--SGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHN 447
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F +VACGHS+TVAL TSGHV+TMGS GQLGNP+ADGK P V+ KL VEEI+CGS
Sbjct: 448 FHQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQPCMVQDKLGNELVEEISCGS 507
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HVA LTS++EVYTWG GANGRLGHG +D+ P+LV+ALKD+ VKSI+CG+NFT IC+
Sbjct: 508 NHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCGSNFTTCICI 567
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+CSGCR PF F RKRHNCYNCGLV CH+CSS+K LKA++AP P KP+RV
Sbjct: 568 HKWVSGADQSVCSGCRQPF-GFTRKRHNCYNCGLVHCHACSSRKVLKAALAPTPGKPHRV 626
Query: 481 CDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFK 540
CD+CF KL+ D SS ++R I + + DK E+ + R ++L S E K
Sbjct: 627 CDSCFMKLKA---ADTGVISSYNKRNVITRRSIDIKDKLERPEIRP-SRLATTSPAEPVK 682
Query: 541 QSEGRSKRNKKL---EFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSR 597
E ++ RN+ + + S +P Q+ + +F FG+ + G +
Sbjct: 683 YQETKNVRNETKPADPMSMMKASQVP-AMLQFKDM----AFAGTFGTVPTTVKSMTMGGQ 737
Query: 598 IVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
+ + P+ P + +P P K+ D K+TN+ L+Q++ KL++QV
Sbjct: 738 M--QMGMPMFSPSPPSKKPSPPPATASPLIGKVDNDGLKKTNELLNQDISKLQSQV 791
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 296/489 (60%), Positives = 375/489 (76%), Gaps = 5/489 (1%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
DD ++LGDV+IWGE DG GL F K D PK LES VVLDV I G R
Sbjct: 213 DDIESLGDVYIWGEVWADGNSFDGLGSQLQAF-CKTDVLTPKPLESDVVLDVHQIGPGDR 271
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H ALV +QGEVF+WGE+SGGRLGHG + D P L+++L+ N+ VACGEYH+CAV+ S
Sbjct: 272 HIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTS 331
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDL+TWGDGT+ GLLGHG +VS+W+PKRV+GPLEG+ V +++CG WH+A+ TS G+LFT
Sbjct: 332 GDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGKLFT 391
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FGDG FGVLGHG+R SV+ P+EV+ L G + ++ ACGVWH+AA+++VM + S S S+
Sbjct: 392 FGDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVM--DLSGSKASAK 449
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+LFTWGDGD+ RLGH +KE L PTCVAA+ E NF +VACG+++TVALT SGHV++MG
Sbjct: 450 RLFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALTASGHVFSMGGT 509
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YGQLGNP +DGK+P V KL FVEEI+CG+ HVAVLTS++E+YTWG+GANGRLGHG
Sbjct: 510 TYGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHG 569
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
DTDD+ SP+LVEALKD+ VK+I+CG+ FT+ ICLHKWVSGVDQS+CS CR PF F RKR
Sbjct: 570 DTDDKKSPTLVEALKDRHVKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQPF-GFTRKR 628
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRG 506
HNCY+CGLV+CH CSSKK+ KA++AP P+KP+RVCD C+ KL+ + D+ + +SR
Sbjct: 629 HNCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKLKGS-DSASDFNREISRPS 687
Query: 507 SINQGPNEF 515
S G F
Sbjct: 688 SSVYGRESF 696
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/480 (62%), Positives = 381/480 (79%), Gaps = 6/480 (1%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ A D+ RVS+SSA+SS SQGSG DD ++LGDV++WGE D G + SC
Sbjct: 184 IRTSAADSSRVSISSALSSYSQGSGTDDIESLGDVYVWGEVWTDVTPSDG-HTSSSC--S 240
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K+D +PK LES VVLDV IACG RH AL +QGEVF+WGEE GGRLGHG D+D+ PK
Sbjct: 241 KVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+++LS ++L++CGE+HTCAVT SGDL+ WGDG+YN GLLG G EVS+W+PK+V+GPL
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
EG+ V S++CG WH+A+ TS+G+L+TFGDGTFGVLGHGDR++++ P+EVE+L G +T++
Sbjct: 361 EGLQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGFKTIKV 420
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
ACG+WH+AA+VEV N + +N S KL+TWGDGDK RLGHGDKE +LVP CV AL+E +
Sbjct: 421 ACGIWHSAAIVEVT--NQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYD 478
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
F ++ACGH++TVAL TSG V+TMGS GQLGNP++DGK P V+ +L+ VEEI+CG+
Sbjct: 479 FHQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQPCLVQDRLASELVEEISCGA 538
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HV VLTS++EVYTWG GANGRLGHGD DR P LVEALKD+ VKSI+CG+NFT IC+
Sbjct: 539 SHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEALKDRHVKSISCGSNFTTCICI 598
Query: 421 HKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
HKWVSG DQS+C+GCR F F RKRH+CYNCGLV CH+CSS+K LKA++AP P KP+R+
Sbjct: 599 HKWVSGADQSVCTGCRQAF-GFTRKRHDCYNCGLVHCHACSSRKVLKAALAPTPGKPHRL 657
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/654 (50%), Positives = 428/654 (65%), Gaps = 43/654 (6%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+D +L DVF+WGE GDG+LGGG+++ GS + DS LPK L+S V LD Q+I+CG
Sbjct: 247 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 306
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
+A LV KQG+++SWGEESGGRLGHGV S V HPKLID + +EL CGE+HTCAVT S
Sbjct: 307 YAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTAS 366
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDLY WGDG +N GLLG G+ SHW P R+ G +EGI+V +ISCGPWHTA VTS G+LFT
Sbjct: 367 GDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFT 426
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FGDGTFG LGHGDR S +IPREVE+L G RT++AACGVWH+AAVV V G ++ SSG
Sbjct: 427 FGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVF-GEAT----SSG 481
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGD GRLGHGD E +L+P+CV L +F +VACG S+TVAL+ SG VY MG+
Sbjct: 482 KLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGT- 540
Query: 327 VYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
+P D + P+ +EG L KSFV+E+ACG +H+AVL SK EVYTWGKG+NG+LGH
Sbjct: 541 -----ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGH 595
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRK 445
GDT+ R P+LV+ALK KQV+ + CG+N+TA ICLHK ++G D + CSGCR PF N+ RK
Sbjct: 596 GDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPF-NYMRK 654
Query: 446 RHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRR 505
HNCYNCG VFC+SC+SKKSL A+MAP N+PYRVCD+C+ KL ++ + +S R
Sbjct: 655 LHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATPANSA--R 712
Query: 506 GSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNG 565
S P+ + + DE + + QL R S + F+Q++ + S S I +
Sbjct: 713 FSNASLPSSY-EMDE-IGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSCTSSIHSN 770
Query: 566 SSQWGALNIS--------KSFNPMFGSSKKF-----------------FSASVPGSRIVS 600
G+ N+ SF+ + K+ + +P SR S
Sbjct: 771 MDIKGSFNLKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGLPFSRRGS 830
Query: 601 RATSPISRRPSPPRSTTPTPTL-GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
P+S + SP S T +T +++ + K++N LS E+ L+AQV
Sbjct: 831 VELFPLSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQV 884
>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1096
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 298/518 (57%), Positives = 383/518 (73%), Gaps = 23/518 (4%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+A A+D R S SS S+SS GS DD ++ GDV+IWGE DG F K
Sbjct: 29 RASAVDVIRFSASSTPSNSSGGSEADDIESKGDVYIWGEVFADG------------FPSK 76
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D P+ LES VVLDV++I G H A+V+++G+VF+WGEESGGRLGHG+D D P L
Sbjct: 77 TDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKDFGKPHL 136
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
++ + +++VACGE+HT AV+ + +TWGDGT+N GLLGHGNE+SHW+PK VNG L+
Sbjct: 137 VEFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKSVNGFLD 196
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V S++CG WH+A+ TS G+LFTFGDGTFGVLGHGD++SV P+EV+ L GL+TV+ A
Sbjct: 197 GLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGLKTVKVA 256
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA++EV S SN SS KLFTWGDGDK RLGHG+K+ L PT V+ L+E NF
Sbjct: 257 CGVWHTAAIIEVAF--QSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNF 314
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
++ACGH++TVALTTSGHV+TMGS GQLGNP A GK+P V+ KL F+EEI+CG++
Sbjct: 315 QQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEEISCGAH 374
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVA +TS++E+YTWGKG+NGRLGHGDTDDR SP+LV ALKD+ +K+I+CG+NFT+ +C
Sbjct: 375 HVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSNFTSCVCNQ 434
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
K+VSG DQS+C GCR PF R RHNC NCGLVFCH+CSSKK++KA+MAP +KP+RVC
Sbjct: 435 KYVSGTDQSVCFGCRQPF-GLTRIRHNCNNCGLVFCHNCSSKKAIKAAMAPTLDKPHRVC 493
Query: 482 DNCFNKLRKTFDTDGS--------SHSSVSRRGSINQG 511
D C+ KL+ D S SH S + ++QG
Sbjct: 494 DTCYTKLKVVDTNDPSKFNGKAVPSHCSTTAYERLDQG 531
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/654 (50%), Positives = 428/654 (65%), Gaps = 43/654 (6%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+D +L DVF+WGE GDG+LGGG+++ GS + DS LPK L+S V LD Q+I+CG
Sbjct: 250 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 309
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
+A LV KQG+++SWGEESGGRLGHGV S V HPKLID + +EL CGE+HTCAVT S
Sbjct: 310 YAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTAS 369
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDLY WGDG +N GLLG G+ SHW P R+ G +EGI+V +ISCGPWHTA VTS G+LFT
Sbjct: 370 GDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFT 429
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FGDGTFG LGHGDR S +IPREVE+L G RT++AACGVWH+AAVV V G ++ SSG
Sbjct: 430 FGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVF-GEAT----SSG 484
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGD GRLGHGD E +L+P+CV L +F +VACG S+TVAL+ SG VY MG+
Sbjct: 485 KLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGT- 543
Query: 327 VYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
+P D + P+ +EG L KSFV+E+ACG +H+AVL SK EVYTWGKG+NG+LGH
Sbjct: 544 -----ADPSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGH 598
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRK 445
GDT+ R P+LV+ALK KQV+ + CG+N+TA ICLHK ++G D + CSGCR PF N+ RK
Sbjct: 599 GDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPF-NYMRK 657
Query: 446 RHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRR 505
HNCYNCG VFC+SC+SKKSL A+MAP N+PYRVCD+C+ KL ++ + +S R
Sbjct: 658 LHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATPANSA--R 715
Query: 506 GSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNG 565
S P+ + + DE + + QL R S + F+Q++ + S S I +
Sbjct: 716 FSNASLPSSY-EMDE-IGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSCTSSIHSN 773
Query: 566 SSQWGALNIS--------KSFNPMFGSSKKF-----------------FSASVPGSRIVS 600
G+ N+ SF+ + K+ + +P SR S
Sbjct: 774 MDIKGSFNLKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGLPFSRRGS 833
Query: 601 RATSPISRRPSPPRSTTPTPTL-GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
P+S + SP S T +T +++ + K++N LS E+ L+AQV
Sbjct: 834 VELFPLSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQV 887
>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
Length = 1867
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/485 (59%), Positives = 368/485 (75%), Gaps = 39/485 (8%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
+ D FR+S+SS S S+ SG DD ++LGDV++WGE DG+ G +C VK+D
Sbjct: 1030 STDGFRISVSSTPSCSTGTSGPDDIESLGDVYVWGEVCSDGISQDG---TVNCRTVKID- 1085
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
IACG RH ALV +QGEVF+WGEE+GGRLGHG+ DV PKL++
Sbjct: 1086 ----------------IACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEF 1129
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L+ NI+ VACGEYHTCAV+ SGDL+TWGDG +N GLLGHG+++SHW+PKRV+GP+EG+
Sbjct: 1130 LALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQ 1189
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V S++CG WH+A+ T+ G+LFTFGDG FGVLGHGDR+SVS P+EV+ L GL+T++ ACGV
Sbjct: 1190 VLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGV 1249
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
WHT A+VEVM N + ++ SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ NF ++
Sbjct: 1250 WHTVAIVEVM--NQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQI 1307
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
ACGH+LTVALTTSGHV+TMG +GQLG+ +DGKLP V+ +L FVEEI+CG +HVA
Sbjct: 1308 ACGHTLTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVA 1367
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
VLTS++EV+TWGKG+NGRLGHGD +DR +P+LVEALK++ VKSI+C
Sbjct: 1368 VLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSISCA------------- 1414
Query: 425 SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNC 484
DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RVCD C
Sbjct: 1415 ---DQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDAC 1470
Query: 485 FNKLR 489
+ KL+
Sbjct: 1471 YTKLK 1475
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 328/655 (50%), Positives = 423/655 (64%), Gaps = 42/655 (6%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+D +L DVF+WGE GDG+LGGG+++ GS + DS LPK L+S V LD Q+I+CG
Sbjct: 255 EDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTN 314
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
+A LV KQG+++SWGEESGGRLGHGV S V HPKLID +EL CGE+HTCAVT S
Sbjct: 315 YAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTS 374
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDLY WGDG +N GLLG G+ SHW P R+ G +EGI+V +ISCGPWHTA VTSAG+LFT
Sbjct: 375 GDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFT 434
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FGDGTFG LGHGDR S +IPREVE+L G RT+R ACGVWH+AAVV V G +S SSG
Sbjct: 435 FGDGTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVF-GEAS----SSG 489
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGD G+LGHGD ++L+P V L +F +VACG S+TVAL+ SG VY MG+
Sbjct: 490 KLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGT- 548
Query: 327 VYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+P D + P+ +EG L KSFV+E+ACG +H+AVL SK EVYTWGKG+NG+LG
Sbjct: 549 -----ADPSQDDVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLG 603
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
HGDT+ R P+LV+ALK KQV+ + CG+N+TA ICLHK ++G D S CSGCR PF N+ R
Sbjct: 604 HGDTEYRRMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSSRCSGCRHPF-NYMR 662
Query: 445 KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSR 504
K HNCYNCG VFC+SC+SKKSL A+MAP N+PYRVCD+C+ KL ++ G+ +S
Sbjct: 663 KLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLGTPANSA-- 720
Query: 505 RGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPN 564
R S P+ + DE + R L R S + F+Q++ + +S S +
Sbjct: 721 RFSNASLPSSSNEMDEIGTTPQRQLLHRVDSFDFFRQTKIPDLKTIGETSGTSCTSSTHS 780
Query: 565 GSSQWGALNIS--------KSFNPMFGSSKKF-----------------FSASVPGSRIV 599
G+ N+ SF+ + K+ + +P SR
Sbjct: 781 NMDIKGSFNLKGIRRLSRLTSFDSVKEEGKQRSKHCASKSDTSSLIRHSVTCGLPFSRRG 840
Query: 600 SRATSPISRRPSPPRSTTPTPTL-GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
S P+S + SP S T +T ++ + K++N LS E+ L+AQV
Sbjct: 841 SVELFPLSIKSSPVESVATTSDFTTDITDHDLLQEVPKKSNQCLSHEISVLKAQV 895
>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
Length = 1996
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/485 (59%), Positives = 367/485 (75%), Gaps = 38/485 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
+ D FR+S+SS S S+ SG DD ++LGDV++WGE DG+ G V + VK+D
Sbjct: 1151 STDGFRISVSSTPSCSTGTSGPDDIESLGDVYVWGEVWSDGISPDG---VVNSTTVKID- 1206
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
IACG RH ALV +QGEVF+W EE+GGRLGHG+ DV PKL++
Sbjct: 1207 ----------------IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEF 1250
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L+ NI+ VACGEYHTCAV+ SGDL+TWGDG +N GLLGHG+++SHW+PKRV+GP+EG+
Sbjct: 1251 LALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQ 1310
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V S++CG WH+A+ T+ G+LFTFGDG FGVLGHGDR+SVS P+EV+ L GL+T++ ACGV
Sbjct: 1311 VLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGV 1370
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
WHT A+VEVM N + ++ SS KLFTWGDGDK RLGHG+KE L+PTCV++L++ NF ++
Sbjct: 1371 WHTVAIVEVM--NQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQI 1428
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
ACGH+ TVALTTSGHV+TMG +GQLG+ +DGKLP V+ +L FVEEI+CG +HVA
Sbjct: 1429 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVA 1488
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
VLTS++EV+TWGKG+NGRLGHGD DDR +P+LVEAL+++ VKSI+C
Sbjct: 1489 VLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISC-------------- 1534
Query: 425 SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNC 484
G DQS+CSGCR F F RKRHNCYNCGLV CH+CSSKK+LKA++AP P KP+RVCD C
Sbjct: 1535 -GADQSVCSGCRQAF-GFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDAC 1592
Query: 485 FNKLR 489
+ KL+
Sbjct: 1593 YTKLK 1597
>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
Length = 1162
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 335/668 (50%), Positives = 435/668 (65%), Gaps = 48/668 (7%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+A D FRVS SS S+SS GS DD D+ V+IWGE +GV G +G+ K
Sbjct: 127 RASVGDGFRVSASSTPSNSSGGSEPDDIDSFHAVYIWGEVLANGVSPDG---IGTQIPSK 183
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D +PKALES V LDV +IA G H A+ +QG VF+WG+ESGGRLGHG+D D P L
Sbjct: 184 TDVLIPKALESNV-LDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGIDKDFSSPVL 242
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
++ L N E VACGEYHT A++ S +LYTWGDGT+N GLLGHG+E SHW+PK VNGPLE
Sbjct: 243 VEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWIPKMVNGPLE 302
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V SI+CG WH+A+ TS G+LFTFGDG FGVLGHGD++SV P+EV+ L GL+T++ A
Sbjct: 303 GLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLLTGLKTIKVA 362
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CGVWHTAA++EV S SN SS KLFTWGDGD RLGHG+KE L PT VA L+E NF
Sbjct: 363 CGVWHTAAIIEVAF--QSGSNSSSWKLFTWGDGDMHRLGHGNKETYLQPTRVAPLMEYNF 420
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+V CGH++T+ALTTSGHV+TMG +GQLGNP + GK+P V+ KL FVE+I+CG++
Sbjct: 421 HQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEFVEKISCGAH 480
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HVA+LT+K+E+YTWG GANGRLGHGD +DR SP+LV ALKD+ +K+++CG+NFT+ IC+H
Sbjct: 481 HVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGSNFTSCICVH 540
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKA-SMAPNPNKPYRV 480
KWVS DQS+ +G R F +KRHNC+NCGL +CSSKK+LKA ++ P P KP+RV
Sbjct: 541 KWVSETDQSIYNGFRQAF-GLTKKRHNCHNCGL----ACSSKKTLKATTLTPTPEKPHRV 595
Query: 481 CDNCFNKLRKTFDTDGS--------SHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTR 532
CDNC KL+ D S SH S++ + QG R+ T
Sbjct: 596 CDNCNVKLKVVNDNGASKLDRKVTPSHHSINGNERLGQG-------------TIRSTRTL 642
Query: 533 FSSM-ESFKQSEGRSKRNKKLEFNSS---RVSPIPNGSSQWGALNISKSFNPMFGSSKKF 588
S + E K E ++ N K +F+S+ R S +P+ S +
Sbjct: 643 LSPITEPIKYLEIKNS-NPKNKFDSTSFIRASQVPSHVQLKDIAFPSSLSSSQSVLKSTI 701
Query: 589 FSASVPGSRIVSRATSPI---SRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQE 645
AS P + + PI +R+ SP R +P G L ++ +RTND+L+QE
Sbjct: 702 PLASPPRTPPPHTNSGPIFTNTRKQSPTRLASPR-YFGSLN------NNLRRTNDALNQE 754
Query: 646 VIKLRAQV 653
V KL+ Q+
Sbjct: 755 VSKLQNQI 762
>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
Length = 1061
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/574 (55%), Positives = 404/574 (70%), Gaps = 34/574 (5%)
Query: 95 GEVFSWGEESGGRLGHGVD---------SDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
G+V+ WGE + G D +DVL P+ +++ +++ +ACG H VT
Sbjct: 237 GDVYIWGEVLCS-VKVGADKNTSYLSTRADVLLPRPLESNVVLDVHHIACGVRHAAMVTR 295
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
G+++TWG+ + G LGHG P R++GPLEG+ V+S++CGPWHTA+VTS GQL
Sbjct: 296 QGEVFTWGEES--GGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQL 353
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
FTFGDGTFGVLGHG+R++V+ PREVESL GLRT+ ACGVWHTAAVVEV+V SSS+ S
Sbjct: 354 FTFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVIV-TQSSSSAS 412
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SGKLFTWGDGDK RLGHGDKE +L PTCV AL++ NF ++ACGHSLTV LTT+GHV+TMG
Sbjct: 413 SGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMG 472
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S VYGQLGNP ADGK+P VE KL VEEIACG+YHVA LTS+ EVYTWGKGANGRLG
Sbjct: 473 STVYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYTWGKGANGRLG 532
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
HGD +DR +P++VEALKD+ VK IACG N++AAIC HKWVSG +QS CS CR F F R
Sbjct: 533 HGDGEDRKTPTIVEALKDRHVKYIACGANYSAAICFHKWVSGSEQSQCSSCRQAF-GFTR 591
Query: 445 KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSR 504
KRHNCYNCGLV CHSCSS+K+ +A++APNP+KPYRVCD+CF KL K S S+ +R
Sbjct: 592 KRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFVKLNKM-----SEPSNTNR 646
Query: 505 RGSINQGPN---EFIDKDEKLDSRSRAQLTRFSSMESFKQSEGR-SKRNKKLE-FNSSRV 559
R N GP E D+ +K D R ++ T S+++ KQ + + +K+ KK + F+ R
Sbjct: 647 R---NAGPRLSGENKDRLDKADLR-LSKSTPPSNLDLIKQLDSKAAKQGKKADTFSLVRS 702
Query: 560 SPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPT 619
S P+ Q + +S + + SK + S + SR+ SP SRRPSPPRS TP
Sbjct: 703 SQAPS-LLQLKDVVLSSAIDLRPKVSKPVLTP----SGVSSRSVSPFSRRPSPPRSATPV 757
Query: 620 PTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
PT+ GL+ K + D K+TN+ L+QE +KLR QV
Sbjct: 758 PTMSGLSFTKSIADSLKKTNELLNQEALKLRTQV 791
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/572 (53%), Positives = 393/572 (68%), Gaps = 21/572 (3%)
Query: 13 LSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
LS + S + D L DV IWGEG G+LGGG+ R G+ G++ D+ LPK LES
Sbjct: 244 LSQVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLES 303
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL 132
+LDV+ I+ GG+HAALV K GEVF WGE SGG LGH V+ D+ +PK++++L+ + ++
Sbjct: 304 TTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKS 363
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
V+CGEY TCA+T SG+LYTWGD L+G + S W+P R++GPL G +S+++CG
Sbjct: 364 VSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGE 423
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
WH A+V+++GQLFT+GDGTFGVLGHG +S+S P+EVESL GL AACG WHTAA+VE
Sbjct: 424 WHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
V + N GKLFTWGDGDKGRLGHGD+E KL+PTCVA LV+ +F +V+CG LTV
Sbjct: 484 VR-ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTV 542
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LT G VYTMGS V+GQLGNPQA K V GKL FV+EI+ GSYHVA LTSK +
Sbjct: 543 GLTCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSL 602
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
YTWG GANG+LG GDT+DRNSP++VEAL+D+QV+SIACG+ FTAAICLHK +S DQS C
Sbjct: 603 YTWGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAICLHKSISSTDQSAC 662
Query: 433 SGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTF 492
SGCR+ F F RK+HNCYNCGL+FC +CS+KK L AS+APN KP+RVCD C+ L++
Sbjct: 663 SGCRMAF-GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRI- 720
Query: 493 DTDGSSHSSVSRRGSINQGPNEFIDK-----DEKLDS-RSRAQLTRFSSM-----ESFKQ 541
HSS + N P + + DEK D T+FSS+ E+ +
Sbjct: 721 -----KHSSRLLKLE-NHNPRQLLMTQKTSFDEKEDRGEGTPARTQFSSVGQPCNEASQS 774
Query: 542 SEGRSKRNK-KLEFNSSRVSPIPNGSSQWGAL 572
E + +N+ + + VS + NG +WG +
Sbjct: 775 YEKKPFKNQVENQQTVEPVSSLSNGLPRWGQV 806
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/463 (58%), Positives = 345/463 (74%), Gaps = 2/463 (0%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+ D L DV IWGEG G +G N+ G ++D+ LPK LES V+LDV NI+ G +
Sbjct: 256 EKKDILKDVLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRK 315
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
HAAL+ K+GEVF WGE S G+LGH VD DV PK++++L ++++ VACGEY TCA+T S
Sbjct: 316 HAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDS 375
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G+LY WG+ Y L S W+P+R++GPL G+ + +++CG WHTA+V+S+GQLFT
Sbjct: 376 GELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFT 435
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+GDG+FGVLGHG+ SVS P+EVESLKGL ACG WHTAA+V+++V + N G
Sbjct: 436 YGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDIIV-DRFKFNGVGG 494
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGDKGRLGH D E KL+PTCVA LVE +F +V+CG LTVALT +G VYTMGS
Sbjct: 495 KLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLTVALTNTGKVYTMGSS 554
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
V+GQLGNP A K VEGKL + FV+EI+ GSYHVA LTS +YTWGKG NG+LG G
Sbjct: 555 VHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLG 614
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
+ +DRN P+LVEAL+D QV+SIACG+N TAAICLHK +S DQS C GCR+PF F RK+
Sbjct: 615 NVEDRNFPTLVEALRDMQVQSIACGSNLTAAICLHKSISVSDQSACKGCRMPF-GFTRKK 673
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLR 489
HNCYNCGL+FC +CSSKK + AS+APN +KP RVCD+CF ++
Sbjct: 674 HNCYNCGLLFCRACSSKKVMNASLAPNKSKPSRVCDSCFYSMQ 716
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 295/567 (52%), Positives = 388/567 (68%), Gaps = 7/567 (1%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL 76
+ S+ + + D L DV IWGEG G G +G N G +++DS LPK LE V+L
Sbjct: 246 IGSNHRSQRTEKNDVLKDVLIWGEGAGGGNIGCVSNHFGYHSTLQVDSLLPKLLEPTVML 305
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
DV+NI+ G HAAL+ K+GEVF WGE S G+LGH VD DV P ++++L ++ VACG
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACG 365
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
EY TCA+T SG+L+ WG+ Y L+ S W+P++++GPL G+ +S+++CG WHTA
Sbjct: 366 EYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTA 425
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
V+S+GQLFT+GDGTFGVLGHG+ +SVS P+EVESLKGL ACG WHTAA+V+V+
Sbjct: 426 AVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIF- 484
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+ N GKLFTWGDGDKGRLGH D E KL PTCVA LVE +F +V+CG LTVALT
Sbjct: 485 DRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTVALTR 544
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
+G +YTMGS V+GQLGNPQA K VEGKL + FV+EI+ GSYHVA LTS VYTWG
Sbjct: 545 TGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWG 604
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCR 436
KG NG+LG G+ +DRN P+LVEAL+D+QV+SIACG+N TAAICLHK +S DQS C GCR
Sbjct: 605 KGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAICLHKSISVSDQSACKGCR 664
Query: 437 LPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDG 496
+PF F RK+HNCYNCGL+FC +CSSKK + AS+APN +K RVCD+CFN L+ G
Sbjct: 665 MPF-GFTRKKHNCYNCGLLFCRACSSKKLINASLAPNKSKLCRVCDSCFNSLQNITHPGG 723
Query: 497 SSHSSVSRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNK-KLEFN 555
S +S++ +++ +E ++ R QL S+ES + E ++ RN+ + + +
Sbjct: 724 GSRKLLSQQKALS---DEKEERGGATPPGHRLQLMSRPSLES-QPGERKTSRNQGEKQQH 779
Query: 556 SSRVSPIPNGSSQWGALNISKSFNPMF 582
V I G +WG ++ F +
Sbjct: 780 LETVPSISAGLPRWGQVSCPAIFESCY 806
>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1086
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 274/462 (59%), Positives = 350/462 (75%), Gaps = 2/462 (0%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L DV +WGEG G +GG + R+G+ +++D+ +PK LES +LDV++I+ G +HAA
Sbjct: 264 DSLKDVLMWGEGVEGGNIGGMVQRLGNQSVMQVDALVPKLLESTAMLDVRSISLGRKHAA 323
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
L+ K+GEVF WG+ S G+LGH V+ DV PK++++L +++I+ V CGEY TCA+T SG+L
Sbjct: 324 LITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSVVCGEYQTCALTHSGEL 383
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
YTWGD L S W+P ++ GPL+GI +S ++CG WHTA+V+ +GQLFT+GD
Sbjct: 384 YTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEWHTAIVSLSGQLFTYGD 443
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHG +SVS P+EV SL+GL ACG WHTAA+V++ + + N GKLF
Sbjct: 444 GTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVDI-IADRFKFNAVGGKLF 502
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGDGDKGRLGH D E KLVPTCVA LV+ +F RV+CG LTVALT +G VYTMGS V+G
Sbjct: 503 TWGDGDKGRLGHSDMEKKLVPTCVAKLVDYDFIRVSCGRMLTVALTNTGKVYTMGSSVHG 562
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNPQA K VEGKL + FV+EI+ GSYHVAVLTS VYTWGKG NG+LG G+ +
Sbjct: 563 QLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVYTWGKGGNGQLGLGNIE 622
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
DRNSP+ VEAL+D++V+SIACG+N TAAICLHK +S DQS CSGCR+PF RK+HNC
Sbjct: 623 DRNSPTYVEALRDREVESIACGSNLTAAICLHKSISVTDQSSCSGCRMPF-GLTRKKHNC 681
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKT 491
YNCGL+FCHSCSSKK + AS+APN +KP RVCD+C N L+K
Sbjct: 682 YNCGLLFCHSCSSKKVINASLAPNKSKPSRVCDSCLNHLQKV 723
>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
Length = 1088
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 303/632 (47%), Positives = 407/632 (64%), Gaps = 27/632 (4%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+ + L DV IWGEG G++GGG R S G+ +D+ LPK LES ++LDVQ+I+ GG+
Sbjct: 251 EKNNILKDVMIWGEGIEGGLIGGGTERSASHKGMLVDALLPKLLESTMMLDVQSISLGGK 310
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
HAAL+ K GE+FSWG+ GRLGH ++ D+ HPKL+D+L+ + + VACGEY TCA+T +
Sbjct: 311 HAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKA 370
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G++YTWGD + N S W+P++++GPL+GI +S+++CG WHTAVV++ G+LFT
Sbjct: 371 GEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFT 430
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+GDGTFG LGHG+ S+S P+EVESL GL ACG WHTAA+V++M+ + + G
Sbjct: 431 YGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMI-DRFKFKSAVG 489
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGDKG+LGHGD E KL+PTCVA LV+ +F +V+CG LTV LT G VYTMGS
Sbjct: 490 KLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSS 549
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
++GQLGN + VEGKL + FV+ I+ GSYHVA LTS VYTWGKGA+G+LG G
Sbjct: 550 IHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLG 609
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
D+DDRN P+ VEAL DKQV+SIACG+NFTAAICLH+ ++ DQS C GC+LPF F RK+
Sbjct: 610 DSDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYGCKLPF-GFTRKK 668
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRG 506
HNCY+CGL FC CSSKK+ A++APN +K +RVCD CFN LR+ D S +R
Sbjct: 669 HNCYHCGLYFCRMCSSKKTTNAALAPNKSKAFRVCDPCFNILRRHIHLDRSLKQENTR-- 726
Query: 507 SINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGS 566
+ N + + E++D RS S K S S + ++ S I G
Sbjct: 727 TQNSLKQQKVSGFERVDKRSM----------SSKHSPLLSPTKQNIDEMQSHWKFINQGE 776
Query: 567 SQWGALNISKSFNPMFGSSKKFFSASVPGS-RIVSRATSPISRRPSPPRSTTPTPTLGGL 625
+Q + S P +G S P S ++ R + SP ++ T L L
Sbjct: 777 NQQDLETFTSSGIPSWG------QVSCPASFKMCDRENTKTLF--SPSQNQTTANDLVHL 828
Query: 626 TSPKIVVDDAKR----TNDSLSQEVIKLRAQV 653
SP R +++ LS+EV +LR +V
Sbjct: 829 KSPNSSAISLDRFLYGSSEKLSEEVQRLRTEV 860
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/557 (50%), Positives = 379/557 (68%), Gaps = 38/557 (6%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L D+F+WG+ VLG L+ + K + SLP+ L S +LDVQN++CG +HAA
Sbjct: 230 DSLKDIFVWGD-----VLGSVLDDRDTS---KANVSLPRLLNSTQILDVQNVSCGEKHAA 281
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+V KQGEVFSWG+E GGRLGH V VLHPK+I++L+ +++ +A G HTCA+ +SG+L
Sbjct: 282 IVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGEL 341
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG+GT++ G+ + S W P ++ GPLEG+ V ++CG WHTA+++S+GQLFT+GD
Sbjct: 342 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 401
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD SV+ P+EVESLKGLR ACG WHTAA+VE++ + SN SGKLF
Sbjct: 402 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEIL--GTVKSNAPSGKLF 459
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD D+G+LGH DKE+KLVPTCV AL + +F +V+C +LTVALT +G V+T+GS +G
Sbjct: 460 TWGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 519
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLG+ + D VEG L FV EI+ GS HVAVLT +V+TWGKG G+LG G+
Sbjct: 520 QLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYV 579
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
DR+SP+LVEAL+DKQV SIACG+NFT A+CLH+ +SG DQS+CS CRL F +F RK+HNC
Sbjct: 580 DRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRCRLSF-SFARKKHNC 638
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
YNCG +FC+SCS+ K +A++ P+ NK YRVCD CF +L+K + +VS R +
Sbjct: 639 YNCGSMFCNSCSNNKVSRAALGPDRNKRYRVCDACFTQLQKNEEC-----GTVSSRLT-- 691
Query: 510 QGPNEFIDKDEKLDSRSRA---QLTRF-----SSMESFKQSEGRSKRNKKLEFNSSRVSP 561
I+K+E + RA +L+R S ME ++G +RN+ L +P
Sbjct: 692 ------IEKEEAFPTEIRAYTPKLSRIFKEANSIMEKMALAQGYHQRNQDL------AAP 739
Query: 562 IPNGSSQWGALNISKSF 578
+WG + F
Sbjct: 740 DQLRIQRWGQVECPSQF 756
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 279/557 (50%), Positives = 379/557 (68%), Gaps = 38/557 (6%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L D+F+WG+ VLG L+ + K + SLP+ L S +LDVQN++CG +HAA
Sbjct: 165 DSLKDIFVWGD-----VLGSVLDDRDTS---KANVSLPRLLNSTQILDVQNVSCGEKHAA 216
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+V KQGEVFSWG+E GGRLGH V VLHPK+I++L+ +++ +A G HTCA+ +SG+L
Sbjct: 217 IVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGEL 276
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG+GT++ G+ + S W P ++ GPLEG+ V ++CG WHTA+++S+GQLFT+GD
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD SV+ P+EVESLKGLR ACG WHTAA+VE++ + SN SGKLF
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEIL--GTVKSNAPSGKLF 394
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD D+G+LGH DKE+KLVPTCV AL + +F +V+C +LTVALT +G V+T+GS +G
Sbjct: 395 TWGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 454
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLG+ + D VEG L FV EI+ GS HVAVLT +V+TWGKG G+LG G+
Sbjct: 455 QLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYV 514
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
DR+SP+LVEAL+DKQV SIACG+NFT A+CLH+ +SG DQS+CS CRL F +F RK+HNC
Sbjct: 515 DRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRCRLSF-SFARKKHNC 573
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
YNCG +FC+SCS+ K +A++ P+ NK YRVCD CF +L+K + +VS R +
Sbjct: 574 YNCGSMFCNSCSNNKVSRAALGPDRNKRYRVCDACFTQLQKNEEC-----GTVSSRLT-- 626
Query: 510 QGPNEFIDKDEKLDSRSRA---QLTRF-----SSMESFKQSEGRSKRNKKLEFNSSRVSP 561
I+K+E + RA +L+R S ME ++G +RN+ L +P
Sbjct: 627 ------IEKEEAFPTEIRAYTPKLSRIFKEANSIMEKMALAQGYHQRNQDL------AAP 674
Query: 562 IPNGSSQWGALNISKSF 578
+WG + F
Sbjct: 675 DQLRIQRWGQVECPSQF 691
>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
Length = 1077
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/589 (49%), Positives = 391/589 (66%), Gaps = 19/589 (3%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+ + L DV IWGEG G++GGG R S G+ +D+ LPK LES ++LDVQ+I+ GG+
Sbjct: 271 EKNNILKDVMIWGEGIEGGLIGGGTERSASHKGMLVDALLPKLLESTMMLDVQSISLGGK 330
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
HAAL+ K GE+FSWG+ GRLGH ++ D+ HPKL+D+L+ + + VACGEY TCA+T +
Sbjct: 331 HAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKA 390
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G++YTWGD + N S W+P++++GPL+GI +S+++CG WHTAVV++ G+LFT
Sbjct: 391 GEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFT 450
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+GDGTFG LGHG+ S+S P+EVESL GL ACG WHTAA+V++M+ + + G
Sbjct: 451 YGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMI-DRFKFKSAVG 509
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLFTWGDGDKG+LGHGD E KL+PTCVA LV+ +F +V+CG LTV LT G VYTMGS
Sbjct: 510 KLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSS 569
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
++GQLGN + VEGKL + FV+ I+ GSYHVA LTS VYTWGKGA+G+LG G
Sbjct: 570 IHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLG 629
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKR 446
D+DDRN P+ VEAL DKQV+SIACG+NFTAAICLH+ ++ DQS C GC+LPF F RK+
Sbjct: 630 DSDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYGCKLPF-GFTRKK 688
Query: 447 HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRG 506
HNCY+CGL FC CSSKK+ A++APN +K +RVCD CFN LR+ D S +R
Sbjct: 689 HNCYHCGLYFCRMCSSKKTTNAALAPNKSKAFRVCDPCFNILRRHIHLDRSLKQENTR-- 746
Query: 507 SINQGPNEFIDKDEKLDSRSRAQ---------LTRFSSMESFKQSEGRSKRNKKLEFNSS 557
+ N + + E++D RS + M+S + + + + LE +S
Sbjct: 747 TQNSLKQQKVSGFERVDKRSMSSKHSPLLSPTKQNIDEMQSHWKFINQGENQQDLETFTS 806
Query: 558 RVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPI 606
S IP+ WG ++ SF + + +S S V R + +
Sbjct: 807 --SGIPS----WGQVSCPASFKIAISLDRFLYGSSEKLSEEVQRLRTEV 849
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 289/563 (51%), Positives = 374/563 (66%), Gaps = 28/563 (4%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ L DV IWG G G L G +N G+ S +PK LES +LDV NIA GG+HAA
Sbjct: 262 NVLKDVMIWGGGIG--CLVGIVNERFVHPGIY--SLVPKLLESTAMLDVHNIALGGKHAA 317
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
LV KQGEVF WG+ GRLG +D D+ PK++D+L+ ++++ VACGEYHTCA+T SG++
Sbjct: 318 LVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLHVKTVACGEYHTCALTDSGEV 377
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
YTWG+ LL G S W+P+R+ GPL+GI +SS++CG WHTA+V+S G+LFT+GD
Sbjct: 378 YTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHTAIVSSCGRLFTYGD 437
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD +S S P+EVESL GLR AACG WHTAA+VEVM + N +SGKLF
Sbjct: 438 GTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAAIVEVMF-DRFRYNSASGKLF 496
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGDGD+GRLGH D K+VPT V LV+ +F +V+CG LTVALT G V+ MGS YG
Sbjct: 497 TWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYG 556
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNP A K+ VEG+L + FV+ I+ GSYHVAVLTS VYTWG+G G+LG GDT+
Sbjct: 557 QLGNPHARDKVV-IVEGQLKQEFVKVISTGSYHVAVLTSAGSVYTWGRGEIGQLGLGDTE 615
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
DR +P VEAL+D+QV +I CG +FTAAICLHK +S DQS CSGCRLPF F RK+HNC
Sbjct: 616 DRYTPCFVEALRDRQVNTITCGPSFTAAICLHKPISISDQSTCSGCRLPF-GFTRKKHNC 674
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
YNCGL+FC +CSSKK A +AP+ +K +RVCD CF+K + G +HS ++ + S N
Sbjct: 675 YNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQ------GGAHSVMASK-SRN 727
Query: 510 QGPNEFIDKDEKL----DSRSRAQLTRFSSMESFKQSEGRS---------KRNKKLEFNS 556
+ + K+ + R +T+ M S QS R K +++++ +
Sbjct: 728 YNTQQVLKHQHKISDVTEDRGETTVTQ-GPMLSLGQSCYRKSMPSGRKDWKNHQEIQQDV 786
Query: 557 SRVSPIPNGSSQWGALNISKSFN 579
S + G QWG + F
Sbjct: 787 EDSSSMLGGMPQWGQVPCPAMFQ 809
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 286/571 (50%), Positives = 375/571 (65%), Gaps = 34/571 (5%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ L DV IWG G G L G +N ++ S +PK LES +LDV NIA GG+HAA
Sbjct: 262 NVLKDVMIWGGGIG--CLVGIVNE--RFVQPRIYSLVPKLLESTAMLDVHNIALGGKHAA 317
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
L KQGEVF WG GRLG +D D+ PK++D+L+ ++++ VACGEYHTCA+T SG++
Sbjct: 318 LATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEV 377
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
YTWG+ LL G S W+P+++ G L+GI +SS++CG WHTA+V+S G+LFT+GD
Sbjct: 378 YTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRLFTYGD 437
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD +S S P+EVESL GLR AACG WHTAA+VEVM + N +SGKLF
Sbjct: 438 GTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVMF-DRFRYNSASGKLF 496
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGDGD+GRLGH D +KLVPT V LV+ +F +V+CG LTVALT G V+ MGS YG
Sbjct: 497 TWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVFAMGSAKYG 556
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNP A K VEG+L + FV+ I+ GSYHVAVLTS VYTWG+G NG+LG GDT+
Sbjct: 557 QLGNPHARDKAV-MVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTE 615
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
DR +P VEAL+D+QV +I CG +FTAAI LHK +S DQS C+GCRLPF F RK+HNC
Sbjct: 616 DRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTCTGCRLPF-GFTRKKHNC 674
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
Y+CGL+FC +CSSKK A +AP+ +K +RVCD CF+K + G +H ++ + S N
Sbjct: 675 YSCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQ------GGTHPVMASK-SRN 727
Query: 510 QGPNEFIDKDEKL----DSRSRAQLTRFSSMESFKQSEGRS---------KRNKKLEFNS 556
+ + K+ + R +T+ + S QS R K N++ + +
Sbjct: 728 HNSQQLLKHQHKIADVTEDRGETTVTQ-GPLLSLGQSCYRKSMPSGRKDWKSNQESQQDV 786
Query: 557 SRVSPIPNGSSQWGAL------NISKSFNPM 581
SP+ G QWG + I+ + NP+
Sbjct: 787 EDSSPMLGGMPQWGQVPCPAIFKINSTENPV 817
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 265/479 (55%), Positives = 335/479 (69%), Gaps = 8/479 (1%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
++ LSS S S + L DV IWG G G L G +N + S +PK
Sbjct: 241 YKKELSSNRSIMPPASALVGNNVLKDVMIWGGGIG--CLVGIVNE--RFVQNSIYSLVPK 296
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
LES +LDVQN+A GG HAA+V KQGEV+ WG+ GRLG +D D+ PK++D+LS++
Sbjct: 297 LLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDI 356
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
++ VACGEYHTCA+T SGD+YTWG + + L+ G S W+ + + P+EGI +SSI
Sbjct: 357 RVKKVACGEYHTCALTDSGDVYTWGKDSCS-DLVDEGRIRSQWLTHKFSLPVEGISISSI 415
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+CG WHTA+V+S G+LFT+GDGTFGVLGHG+ S S P+EVESLKGL ACG WHTA
Sbjct: 416 ACGEWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTA 475
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
A++EV N S+GKLFTWGD D+GRLGH D KLVPTCV+ LV+ +F +V+CG
Sbjct: 476 AIIEVS-AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGR 534
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+T+ALT G V+ MGS YGQLGNP + VEG L + +V+ I+CGSYHVAVLTS
Sbjct: 535 MMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV-VVEGMLKQEYVKMISCGSYHVAVLTS 593
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
VYTWGKG NG LG GDT++R +P VEAL+D+QV +I CG +FT AICLHK +S D
Sbjct: 594 SGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISD 653
Query: 429 QSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNK 487
QS C+GCRLPF F RK+HNCYNCGL+FC SCSSKK L AS+AP +K +RVC++CFNK
Sbjct: 654 QSSCNGCRLPF-GFTRKKHNCYNCGLLFCRSCSSKKVLNASLAPVKSKAFRVCESCFNK 711
>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 1032
Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/502 (52%), Positives = 340/502 (67%), Gaps = 9/502 (1%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
++ LSS S S + L DV +WG G G L G +N + S +PK
Sbjct: 241 YKKELSSNRSIMPPASALVGNNVLKDVMVWGGGIG--CLVGIVNE--RFVQNSIYSLVPK 296
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
LES +LDVQN+A GG HAA+V KQGEV+ WG+ GRLG +D D+ PK++D LS++
Sbjct: 297 LLESTAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDI 356
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
++ VACGEYHTCA+T SG++Y WG+ L+ G S W+ +++ P+EGI +SSI
Sbjct: 357 RVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSI 416
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+CG WHTA+V+S G+LFT+GDGTFGVLGHG S S P+EVESLKGL ACG WHTA
Sbjct: 417 ACGEWHTAIVSSCGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTA 476
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
A++E+ N S+GKLFTWGD D+GRLGH D KLVPTCV+ LV+ +F +V+CG
Sbjct: 477 AIIEIS-AERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGR 535
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+T+ALT G V+ MGS YGQLGNP + VEG L + +V+ I+CGSYHVAVLTS
Sbjct: 536 MMTLALTNMGKVFAMGSAKYGQLGNPHVKDRAV-VVEGMLKQEYVKMISCGSYHVAVLTS 594
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
VYTWGKG NG LG GDT++R +P VEAL+D+QV +I CG +FT AICLHK +S D
Sbjct: 595 SGSVYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISD 654
Query: 429 QSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
QS C+GCRLPF F RK+HNCYNCGL+FC SCSSKK + AS+AP +K +RVCD+CFN
Sbjct: 655 QSSCNGCRLPF-GFTRKKHNCYNCGLLFCRSCSSKKVMNASLAPVKSKAFRVCDSCFN-- 711
Query: 489 RKTFDTDGSSHSSVSRRGSINQ 510
RK ++ + S R NQ
Sbjct: 712 RKQGSSEHPAMDSSKSRNYNNQ 733
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 525 bits (1351), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/467 (55%), Positives = 342/467 (73%), Gaps = 22/467 (4%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L DVF+WG+ VLG L+ + +LP+ + S +LDVQ+IACG HAA
Sbjct: 227 DSLNDVFLWGD-----VLGSMLD------SEDIPKALPRLVASTTMLDVQSIACGENHAA 275
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+V K GEVFSWG ES LGH ++ V PKL++AL++++++ VA G HTCAVT+SG+L
Sbjct: 276 IVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVTVSGEL 335
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
W +G + GLL + E + W P ++ GP++ I VS I+CG WHTA++TS+GQLFT+GD
Sbjct: 336 LEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAIITSSGQLFTYGD 395
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS--SGK 267
GTFGVLGHGD++ ++ P+EVESLKGLR ACG WHTAAVVEV +SS NC+ SGK
Sbjct: 396 GTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPWHTAAVVEV----TSSFNCNAPSGK 451
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
LFTWGD D+G+LGH DK+ KLVPTCV L +F +V+CG +LTV LT++G V+T+GS
Sbjct: 452 LFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTSTGVVFTIGSSK 511
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+GQLGNP ADG+ VEG L FV EI+ GS HVAVLT K +V+TWGKGA+G+LG GD
Sbjct: 512 HGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGD 571
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRH 447
D+R+SP+LVEAL+ + V+SIACG+NF+AA+CLHK +S DQS+CSGC++ F F RK+H
Sbjct: 572 YDNRSSPTLVEALQGRHVQSIACGSNFSAAVCLHKGMSVKDQSICSGCQMAF-GFTRKKH 630
Query: 448 NCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDT 494
+CYNCG +FC+SCSS K KA + N+ YRVCD CF +L+K D+
Sbjct: 631 SCYNCGSMFCNSCSSNKIAKA----DKNRRYRVCDVCFCQLQKVVDS 673
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 277/631 (43%), Positives = 393/631 (62%), Gaps = 46/631 (7%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
+L D+F+WGE G+ + G ++ K + SLP+ L + ++DVQ++ACG +HAA+
Sbjct: 178 SLKDIFVWGEVPGNVLDHGDVS--------KANVSLPRLLNTTHIIDVQSVACGEKHAAI 229
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V KQGEVFSWG ++GGRLGH V V PK+I++L++ ++ +A G HTCAV++SG+LY
Sbjct: 230 VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 289
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG+GT+ GL G + S W P ++ GPL+GI + I+CG WHTA+++SAGQ+FT+GDG
Sbjct: 290 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYGDG 349
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
TFGVLGHGD +V+ P++VESLKG+R ACG WHTAA+VE M + SN SGKLFT
Sbjct: 350 TFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM--GTVKSNAPSGKLFT 407
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LGH DK+ KLVPTCV L + +F +V+C + T+ LT +G V+T+GS +G+
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
LGNP ++ +EG L FV EI+ GS H+AVLT +V+TWGKG G+LG GD D
Sbjct: 468 LGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVD 527
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCY 450
R+ P+LVEAL+DKQV SIACG NFT AICLH+ +S DQS+CS C+L F F RK+HNCY
Sbjct: 528 RSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTF-GFTRKKHNCY 586
Query: 451 NCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQ 510
NCG +FC+SCS+ K +A++AP+ +K YRVCD CF++++K HS +
Sbjct: 587 NCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKV-----EEHSKLD------- 634
Query: 511 GPNEFIDKDE--KLDSRSRA-QLTRF-----SSMESFKQSEGRSKRNKKLEFNSSRVSPI 562
P + I KDE ++ RS +L R + ME ++ +R++ L P
Sbjct: 635 -PQQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAV------PD 687
Query: 563 PNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 622
+ +WG + F + S+P +++ T S + P P
Sbjct: 688 HVRTLRWGLVECPSQF--------RCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPAS 739
Query: 623 GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
L S + + L +EV +L+ QV
Sbjct: 740 SLLKSANDSKAELDLMENILLEEVKQLQEQV 770
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/631 (43%), Positives = 391/631 (61%), Gaps = 46/631 (7%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
+L D+F+WGE G+ + G ++ K + SLP+ L + ++DVQ++ACG +HAA+
Sbjct: 166 SLKDIFVWGEVPGNVLDHGDVS--------KANVSLPRLLNTTHIIDVQSVACGEKHAAI 217
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V KQGEVFSWG ++GGRLGH V V PK+I++L++ ++ +A G HTCAV++SG+LY
Sbjct: 218 VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 277
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG+GT+ GL G + S W P ++ GPL+GI + I+CG WHTA+++SAGQLF +GDG
Sbjct: 278 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDG 337
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
TFGVLGHGD +V+ P++VESLKG+R ACG WHTAA+VE M + SN SGKLFT
Sbjct: 338 TFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM--GTVKSNAPSGKLFT 395
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LGH DK+ KLVPTCV L + +F +V+C + T+ LT +G V+T+GS +G+
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
LGNP ++ +EG L FV EI+ GS H+AVLT +V+TWGKG G+LG GD D
Sbjct: 456 LGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVD 515
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCY 450
R+ P+LVEAL+DKQV SIACG NFT AICLH+ +S DQS+CS C+L F F RK+HNCY
Sbjct: 516 RSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTF-GFTRKKHNCY 574
Query: 451 NCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQ 510
NCG +FC+SCS+ K +A++AP+ +K YRVCD CF++++K H +
Sbjct: 575 NCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKV-----EEHRKLD------- 622
Query: 511 GPNEFIDKDE--KLDSRSRA-QLTRF-----SSMESFKQSEGRSKRNKKLEFNSSRVSPI 562
P + I KDE ++ RS +L R + ME ++ +R++ L P
Sbjct: 623 -PQQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAV------PD 675
Query: 563 PNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 622
+ +WG + F + S+P +++ T S + P P
Sbjct: 676 HVRTLRWGLVECPSQF--------RCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPAS 727
Query: 623 GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
L S + + L +EV +L+ QV
Sbjct: 728 SLLKSANDSKAELDLMENILLEEVKQLQEQV 758
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 276/631 (43%), Positives = 391/631 (61%), Gaps = 46/631 (7%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
+L D+F+WGE G+ + G ++ K + SLP+ L + ++DVQ++ACG +HAA+
Sbjct: 168 SLKDIFVWGEVPGNVLDHGDVS--------KANVSLPRLLNTTHIIDVQSVACGEKHAAI 219
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V KQGEVFSWG ++GGRLGH V V PK+I++L++ ++ +A G HTCAV++SG+LY
Sbjct: 220 VTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELY 279
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG+GT+ GL G + S W P ++ GPL+GI + I+CG WHTA+++SAGQLF +GDG
Sbjct: 280 EWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYGDG 339
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
TFGVLGHGD +V+ P++VESLKG+R ACG WHTAA+VE M + SN SGKLFT
Sbjct: 340 TFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM--GTVKSNAPSGKLFT 397
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LGH DK+ KLVPTCV L + +F +V+C + T+ LT +G V+T+GS +G+
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
LGNP ++ +EG L FV EI+ GS H+AVLT +V+TWGKG G+LG GD D
Sbjct: 458 LGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVD 517
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCY 450
R+ P+LVEAL+DKQV SIACG NFT AICLH+ +S DQS+CS C+L F F RK+HNCY
Sbjct: 518 RSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTF-GFTRKKHNCY 576
Query: 451 NCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQ 510
NCG +FC+SCS+ K +A++AP+ +K YRVCD CF++++K H +
Sbjct: 577 NCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKV-----EEHRKLD------- 624
Query: 511 GPNEFIDKDE--KLDSRSRA-QLTRF-----SSMESFKQSEGRSKRNKKLEFNSSRVSPI 562
P + I KDE ++ RS +L R + ME ++ +R++ L P
Sbjct: 625 -PQQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAV------PD 677
Query: 563 PNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 622
+ +WG + F + S+P +++ T S + P P
Sbjct: 678 HVRTLRWGLVECPSQF--------RCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPAS 729
Query: 623 GGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
L S + + L +EV +L+ QV
Sbjct: 730 SLLKSANDSKAELDLMENILLEEVKQLQEQV 760
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/549 (49%), Positives = 369/549 (67%), Gaps = 26/549 (4%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L D+F+WG+ VLG L + +LP+ + S +LDVQ+IACG HAA
Sbjct: 452 DSLKDIFLWGD-----VLGSMLG------SEDLPKALPRLVGSTKMLDVQSIACGENHAA 500
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++ KQGEVFSWG+ES GRLGH V+ + PK++ L+++++++VA G HTCAVT+SG+L
Sbjct: 501 IITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGEL 560
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG+G + GLL + WVP ++ GP++ I VS I+CG WH A++TS+GQLFT+GD
Sbjct: 561 FEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYGD 620
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD + ++ P+EVESLKGLR ACG WHTAA+VEVM +S +N SGKLF
Sbjct: 621 GTFGVLGHGDTQGIARPKEVESLKGLRMSSVACGPWHTAAIVEVM--SSFKANAPSGKLF 678
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG+ D+G+L H DK+ KLVPTCV +L+ +F +V+CG +LTV LT +G V+T+GS +G
Sbjct: 679 TWGNADRGKLDHADKKMKLVPTCVDSLIVYDFIQVSCGMALTVVLTVTGVVFTVGSSRHG 738
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNPQ DG+ VEG L FV EI+ GS HVAVLT +V+TWGKGA G+LG GD
Sbjct: 739 QLGNPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGLGDYV 798
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
+R+SP+LVEAL+ + V+SIACG++FTAAICLHK +S DQS+CSGC++ F F RK+HNC
Sbjct: 799 NRSSPTLVEALEGRHVESIACGSSFTAAICLHKAISIKDQSVCSGCQMAF-GFTRKKHNC 857
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
YNCG +FC+SCSS K KAS AP N+ YRVCD CF +L+K D+ + +G +
Sbjct: 858 YNCGSMFCNSCSSNKIAKASFAPE-NRRYRVCDVCFCQLQKAVDSSKVKSELKTSKGEMF 916
Query: 510 QGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQW 569
+ E KL SR +E +G ++RN+ +P+ + +W
Sbjct: 917 K--TEMKSYTPKL---SRIFKEANFIVEKMALLQGPNQRNE------DSATPVQVKTQRW 965
Query: 570 GALNISKSF 578
G + F
Sbjct: 966 GQVECPAQF 974
>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
Length = 1042
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/465 (52%), Positives = 333/465 (71%), Gaps = 14/465 (3%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L DVF+WG VLG L + SLP+ + SA +LDVQ+IACG HAA
Sbjct: 228 DSLKDVFLWG-----SVLGSMLG------SEDIPKSLPRLVGSAKMLDVQSIACGENHAA 276
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++ KQGEV++WG S GRL V+ + PK++++L++++++ VA G HTCA+T+SG+L
Sbjct: 277 IITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGEL 336
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG+G ++ GL+ + W P + GP++ I VS I+CG WHTA++TS+GQLFT+GD
Sbjct: 337 FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGD 396
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD + V+ P+EVESLKG R ACG WHTAA+VEVM +S N SGKLF
Sbjct: 397 GTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM--SSFKGNAPSGKLF 454
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD D+G+LGH D++ KL+PTCV +L + +V+CG ++TV LT +G V+T+GS +G
Sbjct: 455 TWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHG 514
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNP+ADG+ VEG L FV EI+ GS HVAVLT +V+TWGKGA G+LG GD
Sbjct: 515 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 574
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
+R+SP+LVEAL+ + V+S+ CG NFTAAICLHK +S DQS+CS C++ F F RK+HNC
Sbjct: 575 NRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVF-GFTRKKHNC 633
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDT 494
YNCG +FC SC+S K A++AP+ N+ YRVCD CF +L+K D+
Sbjct: 634 YNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDS 678
>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1044
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 271/633 (42%), Positives = 392/633 (61%), Gaps = 45/633 (7%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L DVF WG+ G + G ++ LP ++S +LDVQ+IACG HAA
Sbjct: 229 DSLKDVFFWGDAFGSILECGDTSK-----------PLPMLVDSTNMLDVQSIACGETHAA 277
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++ KQGEV+SWG ES GR+G+ V+ V PK++ +L++++++ VA G HTCAVT+SG+L
Sbjct: 278 IITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHTCAVTVSGEL 337
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
WG+G Y L + + W P ++ PL+GI V I+CGPWHTA++TS+GQL+T+GD
Sbjct: 338 IEWGEGPYMGQLDSYAR--NQWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGD 395
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD + + P+EVESLKG R ACG WHTAA+VEV+ + SN KLF
Sbjct: 396 GTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVI--SDFKSNSPRSKLF 453
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD D+G+LGH DK+ KL+PTCV +L + +F +V+CG +LTVAL+ +G V+T GS ++G
Sbjct: 454 TWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTGVVFTSGSSMHG 513
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNP ADGK + VEG L FV I+ GS HVAV+T+ +V+TWGKG G+LG GD
Sbjct: 514 QLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFL 573
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
+R++P+LV+AL+ + V+S++CG N+TAA+CLHK +S D S+CSGC++ F F RK+HNC
Sbjct: 574 NRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKVISRKDLSVCSGCKMAF-GFTRKKHNC 632
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
Y+CG +FC+SCSS K KA++AP+ ++ YRVCD CF++L K D+ + +G+
Sbjct: 633 YHCGSMFCNSCSSNKVAKAALAPDKSRRYRVCDGCFSQLLKVVDSGKVKSELNTSKGA-- 690
Query: 510 QGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQW 569
E I SR + E + ++RN+ L +P+ S +W
Sbjct: 691 ----EIIRSYTPKLSRIFRDVNLPVEKEKVALVQRSNQRNEVL------YTPVQAKSQRW 740
Query: 570 GALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPK 629
G + F SS S+ + + S + S P+ +S L P
Sbjct: 741 GQVECPAQFLSAEDSS---HYQSISKNHMYSASVSERMHDPTVLKSGR------SLQQPN 791
Query: 630 IVVDDAKRTNDS-----LSQEVIKLRAQVFAFI 657
DD ++ +S L++EV +LR+Q+ +
Sbjct: 792 ---DDQRKDLNSIEETLLTEEVKQLRSQMTLLM 821
>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
Length = 1065
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/465 (52%), Positives = 332/465 (71%), Gaps = 14/465 (3%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L DVF+WG VLG L + SLP+ + SA +LDVQ+IACG HAA
Sbjct: 227 DSLKDVFLWG-----SVLGSMLG------SEDIPKSLPRLVGSAKMLDVQSIACGENHAA 275
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++ KQGEV++WG S GRL V+ + PK++++L++++++ VA G HTCA+T+SG+L
Sbjct: 276 IITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGEL 335
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG+G ++ GL+ + W P + GP++ I VS I+CG WHTA++TS+GQLFT+GD
Sbjct: 336 FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGD 395
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD + V+ P+EVESLKG R ACG WHTAA+VEVM +S N SGKLF
Sbjct: 396 GTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM--SSFKGNAPSGKLF 453
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD D+G+LGH D++ KL+PTCV +L + +V+CG ++TV LT +G V+T+GS +G
Sbjct: 454 TWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHG 513
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNP+ADG+ VEG L FV EI+ GS HVAVLT +V+TWGKGA G+LG GD
Sbjct: 514 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 573
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
+R+SP+LVEAL+ + V+S+ CG NFTAAICLHK +S DQS+CS C++ F F RK HNC
Sbjct: 574 NRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVF-GFTRKEHNC 632
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDT 494
YNCG +FC SC+S K A++AP+ N+ YRVCD CF +L+K D+
Sbjct: 633 YNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDS 677
>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
Length = 1041
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/465 (52%), Positives = 332/465 (71%), Gaps = 14/465 (3%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L DVF+WG VLG L + SLP+ + SA +LDVQ+IACG HAA
Sbjct: 227 DSLKDVFLWG-----SVLGSMLG------SEDIPKSLPRLVGSAKMLDVQSIACGENHAA 275
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++ KQGEV++WG S GRL V+ + PK++++L++++++ VA G HTCA+T+SG+L
Sbjct: 276 IITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGEL 335
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG+G ++ GL+ + W P + GP++ I VS I+CG WHTA++TS+GQLFT+GD
Sbjct: 336 FEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWHTAIITSSGQLFTYGD 395
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD + V+ P+EVESLKG R ACG WHTAA+VEVM +S N SGKLF
Sbjct: 396 GTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM--SSFKGNAPSGKLF 453
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD D+G+LGH D++ KL+PTCV +L + +V+CG ++TV LT +G V+T+GS +G
Sbjct: 454 TWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVLTVTGMVFTIGSSRHG 513
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGNP+ADG+ VEG L FV EI+ GS HVAVLT +V+TWGKGA G+LG GD
Sbjct: 514 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 573
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
+R+SP+LVEAL+ + V+S+ CG NFTAAICLHK +S DQS+CS C++ F F RK HNC
Sbjct: 574 NRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSSCQMVF-GFTRKEHNC 632
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDT 494
YNCG +FC SC+S K A++AP+ N+ YRVCD CF +L+K D+
Sbjct: 633 YNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDS 677
>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 278/625 (44%), Positives = 385/625 (61%), Gaps = 67/625 (10%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ L D+ IWG TG ++ G N + D+ PK LESA + DVQ+I+ G +HAA
Sbjct: 255 NVLKDIMIWGAITG--LIDGSKN--------QNDALSPKLLESATMFDVQSISLGAKHAA 304
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
LV +QGEVF WG + G+LG V+ D+ HPK +++L ++ + VAC ++ TCAVT SG+L
Sbjct: 305 LVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGEL 364
Query: 150 YTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEG-IHVSSISCGPWHTAVVTSAGQLFTF 207
Y WG DG G + S ++ ++++ L G + + S++CG WHTA+VTS+GQLFT+
Sbjct: 365 YLWGIDG----GTIEQSG--SQFLTRKISDVLGGSLSIFSVACGAWHTAMVTSSGQLFTY 418
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G TFGVLGHG +SV+ P+EVESL+ ++ + +CG WHTAA+VE + + S GK
Sbjct: 419 GSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAIDRKFYNAKSCGK 478
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
LFTWGDGDKGRLGH D + KLVPTCV L++ +F +V+CG +LTVAL+ SG VYTMGS +
Sbjct: 479 LFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWTLTVALSVSGTVYTMGSSI 538
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+GQLG P+A K N V G L++ FV++IA GS+HVAVLTS VYTWGKG NG+LG GD
Sbjct: 539 HGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGTNGQLGLGD 598
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRH 447
DRNSP LVE L D+ V+SIACG N TAAICLHK +S DQ+ CS C+ F F RK+H
Sbjct: 599 VRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLTDQTACSSCKSAF-GFTRKKH 657
Query: 448 NCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGS 507
NCYNCGL+FC++CSSKK++ AS+APN +K RVCD+CF+ L
Sbjct: 658 NCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSI---------------- 701
Query: 508 INQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGSS 567
EF + + R QL E + + E ++ N + + +G
Sbjct: 702 -----TEFSRNVKTENHTPRMQLVTRRVSEDWTEKEAENQMQ-----NVPQANRFSDGQP 751
Query: 568 QWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTS 627
+WG +++ F+ F FS S P + VS +RRPS + +T + S
Sbjct: 752 RWGQVSVPSLFH--FDK----FSTSSPINLSVS------ARRPSSTKISTSSE------S 793
Query: 628 PKIVVDDAKRTNDSLSQEVIKLRAQ 652
KI++++ +R L E+ L+ Q
Sbjct: 794 NKILIEEIER----LKAEIRNLQKQ 814
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 269/637 (42%), Positives = 387/637 (60%), Gaps = 56/637 (8%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMD-----SSLPKALESAVVLDVQNIACG 84
D+L DVF WG+ FG +D SLP ++S +LDVQ+IACG
Sbjct: 226 DSLKDVFFWGDA----------------FGSILDYDDTSKSLPMLVDSTNMLDVQSIACG 269
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
HAA++ KQGEV+SWG ES G +G+ V+ V PKL++++++++++ VA G H CAVT
Sbjct: 270 ETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVT 329
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
+SG+L+ WG+G + L + N + W P ++ PL+GI V I+CGPWHTA++TS+GQL
Sbjct: 330 VSGELFEWGEGPHMGQLDCYANNL--WFPHKLFSPLDGISVVKIACGPWHTAIITSSGQL 387
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+T+GDGTFGVLGHGD + + P+EVE LKG R ACG WHTAA+VEV+ + SN
Sbjct: 388 YTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVL--SDFKSNSP 445
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
KLFTWGD D+G+LGH DK+ KL+PTCV +L + +F +V+CG +LTV L+ +G V+T+G
Sbjct: 446 RSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIG 505
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S ++GQLGNP ADG+ VEG L FV I+ GS HVAVLT+ +V+TWGKG G+LG
Sbjct: 506 SSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLG 565
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
GD +R++P+LV+AL+ +QV+SI+CG N+TAA+CLHK +S D S+CSGC++ F F R
Sbjct: 566 LGDYLNRSTPTLVDALEGRQVESISCGYNYTAAVCLHKIISRKDLSVCSGCKMAF-GFTR 624
Query: 445 KRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSR 504
K+HNCY+CG +FC+SCSS K +A++AP+ + YRVCD CF++L + D+ + V
Sbjct: 625 KKHNCYHCGSMFCNSCSSNKVARAALAPDKIRRYRVCDGCFSQLLRVVDS-----AKVKS 679
Query: 505 RGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPN 564
I++G KL R + ++ R N +P+
Sbjct: 680 ELKISKGAEIIRSYTPKLSRIFRDANLPVEKVALVQRPNQR---------NEVPATPVQA 730
Query: 565 GSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGG 624
S +WG + F P F S+ + + S + +S R T +
Sbjct: 731 KSQRWGQVECPAQFLP---GEDSFRYQSISKNHMCS---ASVSER---MHDLTVLKSGRS 781
Query: 625 LTSPKIVVDDAKR----TNDSLSQEVIKLRAQVFAFI 657
L P DD ++ T L++EV +LR+QV +
Sbjct: 782 LQQPN---DDQRKDLNTTETLLTEEVKQLRSQVTLLV 815
>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
Length = 1003
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/638 (42%), Positives = 391/638 (61%), Gaps = 50/638 (7%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+L D+F+WG+ + G ++ G + SLP+ L+S+ +L+VQ+IACG +HAA
Sbjct: 194 DSLKDIFVWGD------VLGRMSDHGHVPATNI--SLPRLLKSSQILNVQSIACGEKHAA 245
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+V KQG+VFSWGEE+GGRLGH V PK+ID+L++ ++ +A G +TCAV++SG+L
Sbjct: 246 IVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGEL 305
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y WG+G ++ G + + S W P ++ +GI V I+CG WHTA+++S G+L+T+G
Sbjct: 306 YEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGY 365
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GTFGVLGHGD SV P+EVESL+G R ACG WHTAA+VE + S+ GKLF
Sbjct: 366 GTFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVE--TSGTLKSSAPGGKLF 423
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWGD G+LGH +K++KLVPT V +L++ +F +V+CG SLT LT +G V+T+GS +G
Sbjct: 424 TWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHG 483
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLGN ++D VEG L FV++I+CGS HVAVLT +V+TWGKG G+LG GD
Sbjct: 484 QLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYV 543
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNC 449
DR+SP+LVEAL+DKQV SIAC +NFTA C+H+ +S DQS+CS CRL F F RK+HNC
Sbjct: 544 DRSSPTLVEALEDKQVDSIACSSNFTAVTCVHREISSKDQSVCSSCRLAF-RFTRKKHNC 602
Query: 450 YNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSIN 509
YNCG +FC+SCSS K +A++AP+ +K RVCD CFN+L KT + H +S
Sbjct: 603 YNCGSMFCNSCSSNKVQRAALAPDKSKRCRVCDACFNELNKT-----AQHGKMSCGSKTQ 657
Query: 510 QGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQW 569
+ + + SR ME ++ ++RN++ S+ ++ + +W
Sbjct: 658 KEESSLTETRTYTPKLSRMLKEANFIMEKMGSAQSPNQRNQE----SATLNQMQR--QRW 711
Query: 570 GALNISKSFN------PMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLG 623
G + F P + +SKK + R T P+S+ ++T P P
Sbjct: 712 GQVECPDQFKCARDNIPHWLTSKK----QTIDVLCIGRMTDPVSQ-----KTTAPLPQ-- 760
Query: 624 GLTSPKIVVDDAKRTNDSLS----QEVIKLRAQVFAFI 657
+D ++ D + +EV +L+AQ+ +
Sbjct: 761 -------ATNDRRKEQDLMEKILLEEVKQLQAQMVILL 791
>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
of chromosome condensation (RCC1) domains and a PF|01363
FYVE Zinc finger domain [Arabidopsis thaliana]
gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1006
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 247/461 (53%), Positives = 327/461 (70%), Gaps = 19/461 (4%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ L D+ IWG TG ++ G N + D+ PK LESA + DVQ+I+ G +HAA
Sbjct: 256 NVLKDIMIWGAITG--LIDGSKN--------QNDALSPKLLESATMFDVQSISLGAKHAA 305
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
LV +QGEVF WG + G+LG V+ D+ HPK +++L ++ + VAC ++ TCAVT SG+L
Sbjct: 306 LVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDHQTCAVTESGEL 365
Query: 150 YTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEG-IHVSSISCGPWHTAVVTSAGQLFTF 207
Y WG DG G + S ++ ++++ L G + V S++CG WHTA+VTS+GQLFT+
Sbjct: 366 YLWGIDG----GTIEQSG--SQFLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLFTY 419
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G GTFGVLGHG +SV+ P+EVESL+ ++ + +CG WHTAA+VE + S GK
Sbjct: 420 GSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGK 479
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
LFTWGDGDKGRLGH D + KLVPTCV L++ +F +V+CG +LTVAL+ SG VYTMGS +
Sbjct: 480 LFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSI 539
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+GQLG P+A K N V G L++ FV++IA GS+HVAVLTS VYTWGKG NG+LG GD
Sbjct: 540 HGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGLGD 599
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRH 447
DRNSP LVE L D+ V+SIACG N TAAICLHK +S DQ+ CS C+ F F R++H
Sbjct: 600 VRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLNDQTACSSCKSAF-GFTRRKH 658
Query: 448 NCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
NCYNCGL+FC++CSSKK++ AS+APN +K RVCD+CF+ L
Sbjct: 659 NCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHL 699
>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
Length = 1012
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 238/419 (56%), Positives = 301/419 (71%), Gaps = 25/419 (5%)
Query: 95 GEVFSWGE---ESGGRLGHGVD-------SDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G+V+ WGE ++ R G + +D+L PK +++ +++ VACG H VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG---------PLEGIHVSSISCGPWHT 195
+++TWG+ G LGHG S + P+ V P+ V +SCG WHT
Sbjct: 278 RQAEVFTWGEECS--GRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHT 335
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A+ TS+G+L+TFGDGTFGVLGHG+R+++S P+EVESLKGLRT+ +CGVWHTAAVVEV++
Sbjct: 336 ALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIM 395
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ SN SSGKLFTWGDGDK RLGHGD+ +KL PTCV +L++ NF + CGH+LT+ LT
Sbjct: 396 ---AQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 452
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
TSGH++T GS VYGQLGNP DG+ P VE KL V E+ CG+YHVAVLT EVYTW
Sbjct: 453 TSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTW 512
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGC 435
GKGANGRLGHGD DR +P+ VEAL+D+ VK IACG+ FTAAIC HK VSG++QS CS C
Sbjct: 513 GKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSC 572
Query: 436 RLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDT 494
R PF F RKRHNCYNCGLV CHSCSSKK+L+A+++PNP KPYRVCD+C+ KL K D+
Sbjct: 573 RQPF-GFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDS 630
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 194/365 (53%), Gaps = 63/365 (17%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
R+S+SSA+S+SS GSG DD ++ GDV++WGE D G + D +PK
Sbjct: 195 IRISVSSALSTSSHGSG-DDSESFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPK 253
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
LES V+LDV +ACG +HAALV +Q EVF+WGEE GRLGHG + + P+L+++LS
Sbjct: 254 PLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSIC 313
Query: 129 NIE----------LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
N+E L++CG +HT T SG LYT+GDGT FG+LGHGN + PK V
Sbjct: 314 NVETLPVGLQVVKLLSCGTWHTALRTSSGKLYTFGDGT--FGVLGHGNRETISYPKEVES 371
Query: 179 PLEGIHVSSISCGPWHTAVV---------TSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
L+G+ S+SCG WHTA V TS+G+LFT+GDG LGHGDR S P V
Sbjct: 372 -LKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCV 430
Query: 230 ESLKGLRTVRAACG------------VWHTAAVVEVMVGNSSSSN--------------- 262
SL +A CG ++ + V +GN ++
Sbjct: 431 PSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGV 490
Query: 263 -------------CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
SG+++TWG G GRLGHGD + PT V AL + + R+ACG
Sbjct: 491 VEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSG 550
Query: 310 LTVAL 314
T A+
Sbjct: 551 FTAAI 555
>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 801
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 230/448 (51%), Positives = 310/448 (69%), Gaps = 20/448 (4%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
SLP+ L+S+ +LDVQ+IACG +HAA+V KQG+VFSWGEE+GGRLGH V PK+ID+
Sbjct: 13 SLPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRLGHKTSDSVSDPKIIDS 72
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L++ ++ +A G +TCAV++SG+LY WG+G ++ G + + S W P ++ +GI
Sbjct: 73 LASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQRSPWFPHKLIRTSDGIS 132
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V+ I+CG WHTA+V+S G+LFT+G GTFGVLGHGD +SV P+EVESL+GLR ACG
Sbjct: 133 VAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKEVESLRGLRVKSVACGP 192
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
WHTAA+VE + SN GKLFTWG+ +LGH DK++KLVPT V +L++ +F +V
Sbjct: 193 WHTAAIVE--TSGTPKSNAPGGKLFTWGNASGEKLGHTDKKSKLVPTRVESLIDCDFTQV 250
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
+C G V+T+GS +GQLGNP++D VEG L FV++I+ G+ HVA
Sbjct: 251 SC-----------GVVFTIGSKDHGQLGNPRSDSACICMVEGPLKTEFVKDISSGNSHVA 299
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
VLT +V+TWGKG G+LG GD DR P+LVEAL+DKQV SI C +NFTA IC+H +
Sbjct: 300 VLTMNGKVFTWGKGTEGQLGLGDYLDRTFPTLVEALEDKQVDSIVCSSNFTAVICVHGEI 359
Query: 425 SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNC 484
S D ++CS CRL F F RK+HNCYNCG +FC+SCSS K +A++AP+ +K RVCD C
Sbjct: 360 SSKD-TVCSSCRLAF-RFTRKKHNCYNCGSMFCNSCSSNKVQRATLAPDKSKRCRVCDAC 417
Query: 485 FNKLRKTFDTDGSSHSSVSRRGSINQGP 512
FN+L KT + H +S I + P
Sbjct: 418 FNELNKT-----AEHGKMSCESKIQKEP 440
>gi|22770461|gb|AAN06607.1| chromosome condensation regulator protein [Cicer arietinum]
Length = 358
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/353 (64%), Positives = 274/353 (77%), Gaps = 10/353 (2%)
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
VLGHGDR+++S PREVESL GLRTV ACGVWHTAA+VEV+V SS+S SSGKLFTWGD
Sbjct: 1 VLGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSAS-ISSGKLFTWGD 59
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GDK RLGHGDK+A+L PTCV+AL++ NF R+ACGHSLTV LTTSGHV+TMGS VYGQLGN
Sbjct: 60 GDKNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGN 119
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
PQ+DGKLP VE KL+ VEEIACG+YHV VLTSK EVYTWGKGANGRLGHGD +DR
Sbjct: 120 PQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKM 179
Query: 394 PSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCG 453
P+LVEALKD+ VK IACG+N++AAICLHKWVSG +QS CS CR F F RKRHNCYNCG
Sbjct: 180 PTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAF-GFTRKRHNCYNCG 238
Query: 454 LVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPN 513
LV CHSCSS+K+ +A++APNP KPYRVCD+C+ KL K ++ S+ +RR + + P
Sbjct: 239 LVHCHSCSSRKAFRAALAPNPGKPYRVCDSCYTKLIKIAES-----SNNNRRNGMPRFPG 293
Query: 514 EFIDKDEKLDSRSRAQLTRFSSMESFKQSEGR-SKRNKKLE-FNSSRVSPIPN 564
E D+ EK + R S+M+ KQ + + +K+ KK + F+ R S P+
Sbjct: 294 ENKDRLEKSELRLLKPAVP-SNMDLIKQLDSKAAKQGKKADTFSLVRTSQPPS 345
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 107/219 (48%), Gaps = 15/219 (6%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK-----------QGEVFSWGEESGGR 107
G + + S P+ +ES L ACG H A + + G++F+WG+ R
Sbjct: 5 GDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGDKNR 64
Query: 108 LGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
LGHG L P + AL + N +ACG T +T SG ++T G Y G LG+
Sbjct: 65 LGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVY--GQLGNPQS 122
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
+P V L G V I+CG +H V+TS +++T+G G G LGHGD + +P
Sbjct: 123 DGK-LPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMPT 181
Query: 228 EVESLKGLRTVRAACGVWHTAAV-VEVMVGNSSSSNCSS 265
VE+LK ACG ++AA+ + V + S CS+
Sbjct: 182 LVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCST 220
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 28/219 (12%)
Query: 108 LGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL-----------SGDLYTWGDGT 156
LGHG ++ +P+ +++LS + ACG +HT A+ SG L+TWGDG
Sbjct: 2 LGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGD 61
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N LGHG++ + P V+ ++ + I+CG T +T++G +FT G +G LG
Sbjct: 62 KN--RLGHGDKDARLEPTCVSALID-YNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLG 118
Query: 217 HGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
+ + +P VE L G ACG +H + S +++TWG G
Sbjct: 119 N-PQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLT------------SKNEVYTWGKGA 165
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
GRLGHGD E + +PT V AL + + +ACG + + A+
Sbjct: 166 NGRLGHGDIEDRKMPTLVEALKDRHVKYIACGSNYSAAI 204
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD-VQNIACGGRHAA 89
A G G T V G G + D LP +E + + V+ IACG H
Sbjct: 91 ACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVT 150
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
++ + EV++WG+ + GRLGHG D P L++AL + +++ +ACG ++ A+ L
Sbjct: 151 VLTSKNEVYTWGKGANGRLGHGDIEDRKMPTLVEALKDRHVKYIACGSNYSAAICL 206
>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
Length = 1023
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 256/572 (44%), Positives = 338/572 (59%), Gaps = 80/572 (13%)
Query: 13 LSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
LS + S + D L DV IWGEG G+LGGG+ R G+ G++ D+ LPK LES
Sbjct: 244 LSQVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLES 303
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL 132
+LDV+ I+ GG+HAALV K GEVF WGE SGGRLGH V+ D+ +PK++++L+ + ++
Sbjct: 304 TTMLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKS 363
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
V+CGEY TCA+T SG+LYTWGD L+G + S W+P R++GPL G +S+++CG
Sbjct: 364 VSCGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGE 423
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
WH A+V+++GQLFT+GDGTFGVLGHG +S+S P+EVESL GL AACG WHTAA+VE
Sbjct: 424 WHMAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVE 483
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
V + N GKLFTWGDGDKGRLGHGD+E KL+PTCVA LV+ +F +V+CG LTV
Sbjct: 484 VR-ADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTV 542
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LT G VYTM G+LG+ + D P VE +L VE IACGS A +
Sbjct: 543 GLTCLGTVYTM-----GRLGDTE-DRNSPAVVE-ELRYRQVESIACGSGFTAAI------ 589
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
CLHK +S DQS C
Sbjct: 590 ----------------------------------------------CLHKSISSTDQSAC 603
Query: 433 SGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTF 492
SGCR+ F F RK+HNCYNCGL+FC +CS+KK L AS+APN KP+RVCD C+ L++
Sbjct: 604 SGCRMAF-GFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRI- 661
Query: 493 DTDGSSHSSVSRRGSINQGPNEFIDK-----DEKLDS-RSRAQLTRFSSM-----ESFKQ 541
HSS + N P + + DEK D T+FSS+ E+ +
Sbjct: 662 -----KHSSRLLKLE-NHSPRQLLMTQKTSFDEKEDRGEGTPARTQFSSVGQPCNEASQS 715
Query: 542 SEGRSKRNK-KLEFNSSRVSPIPNGSSQWGAL 572
E + +N+ + + VS + NG +WG +
Sbjct: 716 YEKKPFKNQVENQQTVEPVSSLSNGLPRWGQV 747
>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
Length = 925
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/463 (49%), Positives = 297/463 (64%), Gaps = 61/463 (13%)
Query: 28 DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
+ D L DV IWGEG G+LGGG+ R G+ G++ D+ LPK LES +LDV+ I+ GG+H
Sbjct: 207 NNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLGGKH 266
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
AALV K GEVF WGE SGGRLGH V+ D+ +PK++++L+ + ++ V+CGEY TCA+T SG
Sbjct: 267 AALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALTHSG 326
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+LYTWGD L+G + S W+P R++GPL G +S+++CG WH A+V+++GQLFT+
Sbjct: 327 ELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQLFTY 386
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
GDGTFGVLGHG +S+S P+EVESL GL AACG WHTAA+VEV + N GK
Sbjct: 387 GDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVR-ADRLKFNTKGGK 445
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
LFTWGDGDKGRLGHGD+E KL+PTCVA LV+ +F +V+CG LTV LT G VYTM
Sbjct: 446 LFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTM---- 501
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G+LG+ + D P VE +L VE IACGS A +
Sbjct: 502 -GRLGDTE-DRNSPAVVE-ELRYRQVESIACGSGFTAAI--------------------- 537
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRH 447
CLHK +S DQS CSGCR+ F F RK+H
Sbjct: 538 -------------------------------CLHKSISSTDQSACSGCRMAF-GFTRKKH 565
Query: 448 NCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRK 490
NCYNCGL+FC +CS+KK L AS+APN KP+RVCD C+ L++
Sbjct: 566 NCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQR 608
>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
Length = 910
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/357 (61%), Positives = 259/357 (72%), Gaps = 24/357 (6%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+V+ WGE L ++S+V+ +++ +ACG H VT G+++TWG+
Sbjct: 237 GDVYIWGEVICDNLVKPLESNVV----------LDVHHIACGVRHAALVTRQGEIFTWGE 286
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNG-----------PLEGIHVSSISCGPWHTAVVTSAGQ 203
+ G LGHG P+ V PLEG+ V+S++CGPWHTA+VT+ Q
Sbjct: 287 ES--GGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQ 344
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
LFTFGDGTFGVLGHGD+ +V+ PREVESL GLRT+ ACGVWHTAAVVEV+V SS+S
Sbjct: 345 LFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSAS-V 403
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
SSGKLFTWGDGDK RLGHGDKE +L PTCV AL+E NF +VACGHSLTV LTTSG V TM
Sbjct: 404 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTM 463
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
GS VYGQLGNPQ+DGKLP VE KL VEEIACG+YHVAVLTS+ EVYTWGKGANGRL
Sbjct: 464 GSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 523
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFN 440
GHGD +DR +P+LVE LKD+ VK IACG+N+TAAICLHKWVSG Q S PF+
Sbjct: 524 GHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGTVQIFSSRSVSPFS 580
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 208/389 (53%), Gaps = 60/389 (15%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K DAFRVS+SSA S+SS GS DD DALGDV+IWGE D
Sbjct: 206 KGSGSDAFRVSVSSAPSTSSHGSAPDDCDALGDVYIWGEVICD----------------- 248
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+L K LES VVLDV +IACG RHAALV +QGE+F+WGEESGGRLGHGV DV+ P+L
Sbjct: 249 ---NLVKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRL 305
Query: 122 IDALSNMNIELVA------------CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
+++L+ +++ VA CG +HT VT + L+T+GDGT FG+LGHG++ +
Sbjct: 306 VESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGT--FGVLGHGDKDN 363
Query: 170 HWVPKRVNGPLEGIHVSSISCGPWHTAVV-----------TSAGQLFTFGDGTFGVLGHG 218
P+ V L G+ +++CG WHTA V S+G+LFT+GDG LGHG
Sbjct: 364 VAYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHG 422
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
D++ P V +L + ACG T + +SG++ T G G+
Sbjct: 423 DKEPRLKPTCVPALIEYNFQKVACGHSLTVGLT------------TSGQVCTMGSTVYGQ 470
Query: 279 LGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-AD 337
LG+ + KL L+ +ACG LT+ VYT G G+LG+ D
Sbjct: 471 LGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIED 530
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
K P VE L V+ IACGS + A +
Sbjct: 531 RKTPTLVE-TLKDRHVKYIACGSNYTAAI 558
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 600 SRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
SR+ SP SR+PSPPRS TP PT GL+ K + D K+TN+ L+QEV+KLR QV
Sbjct: 573 SRSVSPFSRKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQV 626
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 63 DSSLPKALESAVVLD-VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LP +E ++ + V+ IACG H A++ + EV++WG+ + GRLGHG D P L
Sbjct: 477 DGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTL 536
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
++ L + +++ +ACG +T A+ L+ W GT
Sbjct: 537 VETLKDRHVKYIACGSNYTAAIC----LHKWVSGTVQI 570
>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
Length = 905
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/433 (54%), Positives = 275/433 (63%), Gaps = 43/433 (9%)
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
+P+ +ES L ACG H A V + G++F+WG+ GRLGHG
Sbjct: 295 VPKPLESAVLLDVQNIACGGRHAALVTK------------QGEVFSWGEESGGRLGHGVD 342
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG--SPVYGQLGN-PQADGKLP 341
P + AL N VACG + A+T SG +YT G S +G LG +P
Sbjct: 343 SDVSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVP 402
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
R+ G V I+CG +H AV+TS +++T+G G G LGHGD P VE+LK
Sbjct: 403 KRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLK 462
Query: 402 DKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCS 461
+ + + T + CL KRHNCYNCGLVFCHSCS
Sbjct: 463 GLRTQLLFWET--SQKYCL------------------------KRHNCYNCGLVFCHSCS 496
Query: 462 SKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEK 521
SKKSLK SMAPNPNKPYRVCDNCF+KLRK +TD SSHSS+SRRGS+NQG NE +KDEK
Sbjct: 497 SKKSLKTSMAPNPNKPYRVCDNCFSKLRKATETDSSSHSSLSRRGSMNQGLNELAEKDEK 556
Query: 522 LDSRSRAQLTRFSSMESFKQSE-GRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFNP 580
LDSRS QL ++SSM+SFKQ E G S+RNKKLEFNSSRVSP+PNG+SQW A N SKSFNP
Sbjct: 557 LDSRSHVQLGKYSSMQSFKQVESGTSRRNKKLEFNSSRVSPLPNGASQWSATNNSKSFNP 616
Query: 581 MFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTND 640
F SKKF SASVPGSRI SRATSP SR+ SPPR TPTP L GLTS KIVV DAK TND
Sbjct: 617 AFPPSKKFISASVPGSRIASRATSPTSRQSSPPRPATPTPILAGLTSSKIVV-DAKSTND 675
Query: 641 SLSQEVIKLRAQV 653
+LSQEV+KLRAQV
Sbjct: 676 NLSQEVLKLRAQV 688
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/237 (87%), Positives = 219/237 (92%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+K M +DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDG LGGG+ RVGS V
Sbjct: 230 LKGMGVDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGTLGGGVLRVGSSSSV 289
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
KMDS +PK LESAV+LDVQNIACGGRHAALV KQGEVFSWGEESGGRLGHGVDSDV HPK
Sbjct: 290 KMDSFVPKPLESAVLLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPK 349
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
LIDAL NMNIELVACGEYH+CAVTLSGDLYTWG G+YNFGLLG GN++SHWVPKR+ GP
Sbjct: 350 LIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPS 409
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD +SV IPREVESLKGLRT
Sbjct: 410 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLKGLRT 466
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 33 GDVFIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAAL 90
GD++ WG G+ + G+LG G + M +PK L + V +I+CG H A+
Sbjct: 376 GDLYTWGGGSYNFGLLGRGND---------MSHWVPKRLIGPSEGIHVSSISCGPWHTAV 426
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV-------ACGEYHTC 141
V G++F++G+ + G LGHG V P+ +++L + +L+ C + H C
Sbjct: 427 VTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLKGLRTQLLFWETSQKYCLKRHNC 484
>gi|414590766|tpg|DAA41337.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 521
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 236/399 (59%), Gaps = 75/399 (18%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
GKLFTWGDGDK RLGHGDKE KL PT +ACGHSLTV LTTS V +MG+
Sbjct: 37 GKLFTWGDGDKHRLGHGDKEPKLKPT------------IACGHSLTVGLTTSRQVLSMGN 84
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
VYGQLGNP+++ VLT+K+EV+TWGKGANGRLGH
Sbjct: 85 IVYGQLGNPRSN---------------------------VLTNKSEVFTWGKGANGRLGH 117
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRK 445
GD +DR P++VE+L+D+ ++ IACG+NFT+AIC HKWVSG +QS + CR PF F RK
Sbjct: 118 GDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWVSGAEQSQYASCRQPF-GFTRK 176
Query: 446 RHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRR 505
RHNC+NCGLV C+ C+S K L+A++APNP KPYRVCD+CF KL + S+++++
Sbjct: 177 RHNCHNCGLVHCNVCTSHKVLRAALAPNPAKPYRVCDSCFMKL-----NSATYSSTINKK 231
Query: 506 GSINQGPNEFIDKDEKLDSRSRA----QLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSP 561
+ + + D KL +RA L S++S +G K+ L F +
Sbjct: 232 KEVVPRHSGESNHDAKL---ARAIVPSNLDMIRSLDSKAAKQG--KKTDALSFLRT---- 282
Query: 562 IPNGSSQW--------GALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPP 613
P SS G ++++KS +S + ++ SR SP SR+PSPP
Sbjct: 283 -PQMSSLLQLRDITLSGVIDLNKSVPRAVRTSVRSLNS--------SRVVSPFSRKPSPP 333
Query: 614 RSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQ 652
RSTTP PT GL+ K D +TN+ LSQEV +LRAQ
Sbjct: 334 RSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQ 372
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLK-GLRTVRAACGVWHTAAVVEVMVGNS 258
G+LFT+GDG LGHGD++ P SL GL T R V +V +GN
Sbjct: 37 GKLFTWGDGDKHRLGHGDKEPKLKPTIACGHSLTVGLTTSRQ---VLSMGNIVYGQLGNP 93
Query: 259 SSSNCSS-GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
S+ ++ ++FTWG G GRLGHGD E + +PT V +L + +ACG + T A+
Sbjct: 94 RSNVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAI 150
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 42/158 (26%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G++F+WG+ RLGHG L P +ACG T +T S + + G+
Sbjct: 37 GKLFTWGDGDKHRLGHGDKEPKLKP------------TIACGHSLTVGLTTSRQVLSMGN 84
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LG+ P+ + V+T+ ++FT+G G G
Sbjct: 85 IVY--GQLGN--------PR--------------------SNVLTNKSEVFTWGKGANGR 114
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
LGHGD + IP VESL+ ACG T+A+ +
Sbjct: 115 LGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQ 152
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE-SAVVLDVQNIACGG----RH 87
G +F WG+G LG G + SL L S VL + NI G R
Sbjct: 37 GKLFTWGDGDKHR-LGHGDKEPKLKPTIACGHSLTVGLTTSRQVLSMGNIVYGQLGNPRS 95
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
L NK EVF+WG+ + GRLGHG D P ++++L + I +ACG T A+
Sbjct: 96 NVLTNK-SEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAI 150
>gi|296086390|emb|CBI31979.3| unnamed protein product [Vitis vinifera]
Length = 429
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/233 (68%), Positives = 181/233 (77%), Gaps = 25/233 (10%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ A + FRVSLSSAVSSSSQGSGHDD DALGDVF+WGEG GDG++G G++RVGS K
Sbjct: 218 RTSASENFRVSLSSAVSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTK 277
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+D+ LPKALES VVLDV +IACGG+HA LV K+GEVFSWGEE G RLGHGV+ DV HPKL
Sbjct: 278 IDALLPKALESTVVLDVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKL 337
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
IDAL MNIELVACGEYH+CAVTLSGDLYTWGDGT+N GLLGHG+E SHW+PK+V+
Sbjct: 338 IDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVS---- 393
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
QLFTFGDGTFG LGHGD S+SIPREVE+L+G
Sbjct: 394 ---------------------QLFTFGDGTFGALGHGDHSSMSIPREVEALRG 425
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 25/161 (15%)
Query: 147 GDLYTWGDGTYNFGLLGHG---------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
GD++ WG+G + G++G G ++ +PK + + + V SI+CG H +
Sbjct: 249 GDVFMWGEGIGD-GIMGAGVHRVGSSSSTKIDALLPKALESTVV-LDVHSIACGGKHAVL 306
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
VT G++F++G+ LGHG VS P+ +++L G+ ACG +H+ AV
Sbjct: 307 VTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVT------ 360
Query: 258 SSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAAL 296
SG L+TWGDG + G LGHG + + +P V+ L
Sbjct: 361 ------LSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSQL 395
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 50/213 (23%)
Query: 202 GQLFTFGDGT-FGVLGHGDRKSVS---------IPREVESLKGLRTVRAACGVWHTAAVV 251
G +F +G+G G++G G + S +P+ +ES L ACG H V
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ G++F+WG+ RLGHG + P + AL N VACG +
Sbjct: 309 K------------KGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHS 356
Query: 312 VALTTSGHVYTMGSPVY--GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
A+T SG +YT G + G LG+ +A +P +V
Sbjct: 357 CAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKV------------------------ 392
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
++++T+G G G LGHGD + P VEAL+
Sbjct: 393 -SQLFTFGDGTFGALGHGDHSSMSIPREVEALR 424
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 323 MGSPVY--GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
MG+ V+ G + + D LP +E + V IACG H ++T K EV++WG+
Sbjct: 263 MGAGVHRVGSSSSTKIDALLPKALESTVVLD-VHSIACGGKHAVLVTKKGEVFSWGEECG 321
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
RLGHG D + P L++AL ++ +ACG + A+ L
Sbjct: 322 SRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361
>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
Length = 169
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/171 (87%), Positives = 160/171 (93%), Gaps = 2/171 (1%)
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
FSWGEES GRLGHGVDS+V HPKLIDAL NIELVACGEYH+CAV+LSGDLYTWG G
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKG-- 58
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
+FG+LGHGNEVSHWVPKRVN +EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59 DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
GDRKSV IPREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
F WGE + +G LG GV + PK +++ +++ +ACG H+ V+ G
Sbjct: 1 FSWGEES-EGRLG---------HGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSG 50
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++++WG+ G LGHG + PK ++ L +++ +ACG YHT VT +G L+T+GD
Sbjct: 51 DLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGD 110
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
GT FG+LGHG+ S ++P+ V+ L+G+ +CG WHTA V
Sbjct: 111 GT--FGVLGHGDRKSVFIPREVD-SLKGLRTVRAACGVWHTAAVVEV 154
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F+WG+ +GRLGHG P + AL N VACG + A++ SG +YT G +
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G LG+ + +P RV + V IACG YH AV+TS +++T+G G G LGHGD
Sbjct: 61 GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P V++LK + ACG TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 16/167 (9%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WG+ + G LGHG + + PK ++ L ++ ++CG +H+ V+ +G L+T+G
Sbjct: 1 FSWGEESE--GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYHSCAVSLSGDLYTWGK 57
Query: 210 GTFGVLGHGDRKSVSIPREVESL-KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G FG+LGHG+ S +P+ V L +G+ ACG +HTA V S+G+L
Sbjct: 58 GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQL 105
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
FT+GDG G LGHGD+++ +P V +L R ACG T A+
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
GD++ WG+G G+LG G ++ +PK + + + V +IACG H A+V
Sbjct: 50 GDLYTWGKGD-FGILG---------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV 99
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G++F++G+ + G LGHG V P+ +D+L + ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152
>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
Length = 169
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 149/171 (87%), Positives = 160/171 (93%), Gaps = 2/171 (1%)
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
FSWGEES GRLGHGVDS+V HPKLIDAL NIELVACGEYH+CAV+LSGDLYTWG G
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKG-- 58
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
+FG+LGHGNEVSHWVPKRVN +EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59 DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
GDRKSV IPRE++SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
F WGE + +G LG GV + PK +++ +++ +ACG H+ V+ G
Sbjct: 1 FSWGEES-EGRLG---------HGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSG 50
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++++WG+ G LGHG + PK ++ L +++ +ACG YHT VT +G L+T+GD
Sbjct: 51 DLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGD 110
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
GT FG+LGHG+ S ++P+ ++ L+G+ +CG WHTA V
Sbjct: 111 GT--FGVLGHGDRKSVFIPREID-SLKGLRTVRAACGVWHTAAVVEV 154
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F+WG+ +GRLGHG P + AL N VACG + A++ SG +YT G +
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G LG+ + +P RV + V IACG YH AV+TS +++T+G G G LGHGD
Sbjct: 61 GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +++LK + ACG TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 94/167 (56%), Gaps = 16/167 (9%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WG+ + G LGHG + + PK ++ L ++ ++CG +H+ V+ +G L+T+G
Sbjct: 1 FSWGEESE--GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYHSCAVSLSGDLYTWGK 57
Query: 210 GTFGVLGHGDRKSVSIPREVESL-KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G FG+LGHG+ S +P+ V L +G+ ACG +HTA V S+G+L
Sbjct: 58 GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQL 105
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
FT+GDG G LGHGD+++ +P + +L R ACG T A+
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
GD++ WG+G G+LG G ++ +PK + + + V +IACG H A+V
Sbjct: 50 GDLYTWGKGD-FGILG---------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV 99
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G++F++G+ + G LGHG V P+ ID+L + ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152
>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
Length = 169
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/171 (87%), Positives = 160/171 (93%), Gaps = 2/171 (1%)
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
FSWGEES GRLGHGVDS+V HPKLIDAL NIELVACGEYH+CAV+LSGDLYTWG G
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKG-- 58
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
+FG+LGHGNEVSHWVPKRVN +EG+HVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59 DFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
GDRKSV IPREV+SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 96/167 (57%), Gaps = 14/167 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
F WGE + +G LG GV + PK +++ +++ +ACG H+ V+ G
Sbjct: 1 FSWGEES-EGRLG---------HGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSG 50
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++++WG+ G LGHG + PK ++ L M++ +ACG YHT VT +G L+T+GD
Sbjct: 51 DLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGD 110
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
GT FG+LGHG+ S ++P+ V+ L+G+ +CG WHTA V
Sbjct: 111 GT--FGVLGHGDRKSVFIPREVD-SLKGLRTVRAACGVWHTAAVVEV 154
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F+WG+ +GRLGHG P + AL N VACG + A++ SG +YT G +
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G LG+ + +P RV + V IACG YH AV+TS +++T+G G G LGHGD
Sbjct: 61 GILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P V++LK + ACG TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 16/167 (9%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WG+ + G LGHG + + PK ++ L ++ ++CG +H+ V+ +G L+T+G
Sbjct: 1 FSWGEESE--GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYHSCAVSLSGDLYTWGK 57
Query: 210 GTFGVLGHGDRKSVSIPREVESL-KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G FG+LGHG+ S +P+ V L +G+ ACG +HTA V S+G+L
Sbjct: 58 GDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVT------------SAGQL 105
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
FT+GDG G LGHGD+++ +P V +L R ACG T A+
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
GD++ WG+G G+LG G ++ +PK + + + V +IACG H A+V
Sbjct: 50 GDLYTWGKGD-FGILG---------HGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVV 99
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G++F++G+ + G LGHG V P+ +D+L + ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVV 152
>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
Length = 169
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 148/171 (86%), Positives = 159/171 (92%), Gaps = 2/171 (1%)
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
FSWGEES GRLGHGVDS+V HPKLIDAL NIELVACGEY +CAV+LSGDLYTWG G
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKG-- 58
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
+FG+LGHGNEVSHWVPKRVN +EGIHVSSI+CGP+HTAVVTSAGQLFTFGDGTFGVLGH
Sbjct: 59 DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
GDRKSV IPRE++SLKGLRTVRAACGVWHTAAVVEVMVG+SSSSNCSSGKL
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKL 169
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F+WG+ +GRLGHG P + AL N VACG + A++ SG +YT G +
Sbjct: 1 FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G LG+ + +P RV + V IACG YH AV+TS +++T+G G G LGHGD
Sbjct: 61 GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +++LK + ACG TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 14/167 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
F WGE + +G LG GV + PK +++ +++ +ACG + V+ G
Sbjct: 1 FSWGEES-EGRLG---------HGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSG 50
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++++WG+ G LGHG + PK ++ L +++ +ACG YHT VT +G L+T+GD
Sbjct: 51 DLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGD 110
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
GT FG+LGHG+ S ++P+ ++ L+G+ +CG WHTA V
Sbjct: 111 GT--FGVLGHGDRKSVFIPREID-SLKGLRTVRAACGVWHTAAVVEV 154
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 93/167 (55%), Gaps = 16/167 (9%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WG+ + G LGHG + + PK ++ L ++ ++CG + + V+ +G L+T+G
Sbjct: 1 FSWGEESE--GRLGHGVDSNVQHPKLID-ALGTTNIELVACGEYXSCAVSLSGDLYTWGK 57
Query: 210 GTFGVLGHGDRKSVSIPREVESL-KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G FG+LGHG+ S +P+ V L +G+ ACG +HTA V S+G+L
Sbjct: 58 GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQL 105
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
FT+GDG G LGHGD+++ +P + +L R ACG T A+
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
GD++ WG+G G+LG G ++ +PK + + + V +IACG H A+V
Sbjct: 50 GDLYTWGKGD-FGILG---------HGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVV 99
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G++F++G+ + G LGHG V P+ ID+L + ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 210/388 (54%), Gaps = 30/388 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G DG LG G D P +++ + IACG H ++ +
Sbjct: 3 VYSWGRGE-DGQLG---------LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDE 52
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV++WG GRLGHG + P+L++ L NI V CG YHT AVT+SGDLYTWG
Sbjct: 53 GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LGHGNE H P V L+G+ V ++CG HT V+ ++T+GD GV
Sbjct: 113 GMY--GKLGHGNETGHSTPFLVE-TLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169
Query: 215 LGHGDRKSVS-IPREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
GHGD + +P VE L+G V+ +ACG +HTAA+ E G++FT+G
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKNIVQISACG-FHTAALSEF------------GEVFTFG 216
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G GRLGH + + V V AL +VACG T A+T +G VYT G +GQLG
Sbjct: 217 EGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + +P RVE L + V +I CG H LT EVYTWG G +G+LGH DT
Sbjct: 277 HGDKVNKTVPTRVE-SLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTTKV 335
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
P LV+ L+ K+V S+A T A+
Sbjct: 336 TLPKLVDVLEGKRVISVASYNEHTVALV 363
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 127/219 (57%), Gaps = 12/219 (5%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WG+ +GV G G + LP +E ++ I+ G H A +++
Sbjct: 158 DVYTWGDKE-NGVSGHG--------DTEGHQYLPCPVEELRGKNIVQISACGFHTAALSE 208
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
GEVF++GE GRLGH + + + ++AL+ ++ VACG +HT AVT +G++YTWG
Sbjct: 209 FGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG 268
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G + G LGHG++V+ VP RV +E + V I+CG HT +T G+++T+G+G G
Sbjct: 269 GGEH--GQLGHGDKVNKTVPTRVESLVEKL-VVQITCGWSHTVALTDTGEVYTWGNGDHG 325
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
LGH D V++P+ V+ L+G R + A HT A+V+
Sbjct: 326 KLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 88/155 (56%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+++WG G+ G+LG GD + P + AL E ++ACG TV LT G VYT G
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G+LG+ K R+ +L + ++ CGSYH A +T ++YTWG G G+LGHG+
Sbjct: 63 DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
++P LVE LK QV+ +ACG+ T + +K
Sbjct: 123 ETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENK 157
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 155/464 (33%), Positives = 229/464 (49%), Gaps = 48/464 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
D++ WG + GVLG G + + P+ +E+ + D++ +ACG H V+
Sbjct: 374 DIYTWG-ASPKGVLG---------HGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSV 423
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
GE+FSWG GG+LG D P I A N+NI V+C E H+ +VT SG+LYT+G
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFG 483
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ G + + VP++V+ + ++SCG T + S G+L++FG G
Sbjct: 484 RSGPHLGYTTEDRKQA--VPRKVDFSTAN-KIKAVSCGLEFTIALNSEGELYSFGKNDCG 540
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + P ++ L G+R + +CG H AV +G ++ WG
Sbjct: 541 QLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVT------------VNGDVWLWGS 588
Query: 274 GDKGRLGHGDKEAKLVP-TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+ G+LG EA +P + + CG S TV L+ +G VY G+ GQLG
Sbjct: 589 NEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLG 648
Query: 333 -----------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
NP +PN + + ++ CG H A +T +YTWG G+ G
Sbjct: 649 VAVNQTSPYITNP-CILSMPNNTK-------IAKVDCGIEHTAAVTESGCLYTWGNGSRG 700
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNN 441
RLGHGD DR P+LVE+L KQV+SIACG TAA + WV + C C+ F
Sbjct: 701 RLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVIRAWVHDQETKSCMACKQRFTT 760
Query: 442 FKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCF 485
R+RH+C CG +FC +CS +K + ++P RVCD C+
Sbjct: 761 V-RRRHHCRKCGGIFCGTCSQRKC--PLLEIGYSEPVRVCDRCY 801
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 22/241 (9%)
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+V A ++T+G GVLGHG+ PR VE+L G ACG HT AV
Sbjct: 366 VSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAV---- 421
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+G++F+WG G G+LG + + +P + A N V+C + ++
Sbjct: 422 --------SVNGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASV 473
Query: 315 TTSGHVYTMGS--PVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
T SG +YT G P LG D K +P +V+ + ++ ++CG L S+
Sbjct: 474 TESGELYTFGRSGP---HLGYTTEDRKQAVPRKVDFSTANK-IKAVSCGLEFTIALNSEG 529
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH--KWVSGVD 428
E+Y++GK G+LG G +D P L++ L ++ ++CG+ A+ ++ W+ G +
Sbjct: 530 ELYSFGKNDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSN 589
Query: 429 Q 429
+
Sbjct: 590 E 590
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 345 EGKLSKS---FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
E LSK+ + E+ V+V ++YTWG G LGHG+ + P +VEAL
Sbjct: 345 EADLSKADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALL 404
Query: 402 DKQVKSIACGTNFTAAI 418
+ ++++ACGT T A+
Sbjct: 405 GRDIRTVACGTEHTLAV 421
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 208/388 (53%), Gaps = 30/388 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G DG LG G D P +++ + IACG H ++ ++
Sbjct: 3 VYSWGRGE-DGQLG---------LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEE 52
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV++WG GRLGHG + P+L++ L NI V CG YHT AVT+SGDLYTWG
Sbjct: 53 GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LGHGNE H P V L+ + V ++CG HT V+ ++T+GD GV
Sbjct: 113 GMY--GKLGHGNETGHSTPYLVE-TLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169
Query: 215 LGHGDRKSVS-IPREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
GHGD + +P VE L+G V+ +ACG +HTAA+ E G++FT+G
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKSIVQISACG-FHTAALSEF------------GEVFTFG 216
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G GRLGH + + V V AL +VACG T A+T +G VYT G +GQLG
Sbjct: 217 EGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLG 276
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + +P RVE L K V +I CG H LT EVYTWG G +G+LGH DT
Sbjct: 277 HGDKVNKTVPTRVESLLEK-LVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKV 335
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
P V+ L K+V S+A T A+
Sbjct: 336 TLPKPVDVLDGKRVISVASYNEHTVALV 363
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 125/219 (57%), Gaps = 12/219 (5%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WG+ +GV G G + LP +E + I+ G H A +++
Sbjct: 158 DVYTWGDKE-NGVSGHG--------DTEGHQYLPCPVEELRGKSIVQISACGFHTAALSE 208
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
GEVF++GE GRLGH + + + +DAL+ ++ VACG +HT AVT +G++YTWG
Sbjct: 209 FGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG 268
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G + G LGHG++V+ VP RV LE + V I+CG HT +T G+++T+G+G G
Sbjct: 269 GGEH--GQLGHGDKVNKTVPTRVESLLEKL-VLQITCGWSHTVTLTDTGEVYTWGNGDHG 325
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
LGH D V++P+ V+ L G R + A HT A+V+
Sbjct: 326 KLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVD 364
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 88/155 (56%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+++WG G+ G+LG GD + P + AL E ++ACG TV LT G VYT G
Sbjct: 3 VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G+LG+ K R+ +L + ++ CGSYH A +T ++YTWG G G+LGHG+
Sbjct: 63 DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
++P LVE LK QV+ +ACG+ T + +K
Sbjct: 123 ETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENK 157
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 209/387 (54%), Gaps = 30/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G DG LG G D P +E+ I+CG H ++
Sbjct: 3 VYTWGRGE-DGQLG---------LGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDD 52
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+V++WG GRLGHG + P+L++ L + + V CG YHT AVT+SG+LYTWG
Sbjct: 53 GKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGG 112
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LGHGNE H P V ++G++V ++CG HT V+ ++T+GD GV
Sbjct: 113 GMY--GKLGHGNENGHSTPSLVE-SIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGV 169
Query: 215 LGHGDRKSVSI-PREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
GHGD P V L + + +ACG +HTAA+ E +G++FT+G
Sbjct: 170 SGHGDTSGHQYSPYCVSELVEINIKQISACG-FHTAALSE------------NGQVFTFG 216
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G GRLGH + + V C+ AL+ +VACG T A+T SGHV+T G +GQLG
Sbjct: 217 EGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLG 276
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + +P RVE + K+ + ++ CG H LT K EV+TWG G +G+LGH DT+
Sbjct: 277 HGDKVNQIIPTRVESLIDKNII-QLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKV 335
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
P L+E K+V S+A T A+
Sbjct: 336 TEPKLIETFNSKRVISVASYNEHTVAL 362
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 235/469 (50%), Gaps = 53/469 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSS--LPKALESAVVLDVQNIACGGRHAALV 91
D+++WG GG R+G K D LP +ES + +V IACGG H +
Sbjct: 163 DLYLWG--------GGDRGRLGH----KDDKPRFLPNVVESLLGQNVTMIACGGSHTIAL 210
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+VFSWG G LGHG D P +ID L ++N+ VAC E H+ ++ G+LY
Sbjct: 211 NSKGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLY 270
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
TWG G + + V+ R+ L G + ++CG HT V+ G++++FG
Sbjct: 271 TWGKAGPFLGYM--DDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGIN 328
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G K+++ P V +L + + +CG H+AA+ E G LF
Sbjct: 329 KFGELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDE------------DGVLFM 374
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG------ 324
WG G +G+LG G+ ++ PT V + V+CG+ T A+T +G Y G
Sbjct: 375 WGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQ 434
Query: 325 ----SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
S VYG+L +P+ LP+ + +I CG+ ++TS +++TWG +
Sbjct: 435 CGVPSSVYGELSSPRGI-VLPSGIRPT-------QINCGANFTVLVTSIGQLFTWGCNMS 486
Query: 381 GRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPF 439
G+LG+G+ S P VE+L +K+VK +ACG + + H WV + C C+ F
Sbjct: 487 GQLGNGEAKKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWVPDEEVKSCMACKKSF 546
Query: 440 NNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
R+RH+C CG +FC SCS+K+ + P RVCD C+ L
Sbjct: 547 TAI-RRRHHCRQCGGIFCGSCSTKRY--PLLDKGHADPVRVCDKCYVSL 592
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
+S L+ WG GD+GRLGH D + + +P V +L+ N +ACG S T+AL + G V++
Sbjct: 160 NSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSW 219
Query: 324 GSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G+ G LG+ D P ++G L V +AC H AV++ +YTWGK A
Sbjct: 220 GAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPF 278
Query: 383 LGHGD--TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG+ D + P LV+AL ++ +ACG + T I
Sbjct: 279 LGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVI 316
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 355 EIACGSYHVAVLT--SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
E+ G+ VL + ++Y WG G GRLGH D R P++VE+L + V IACG
Sbjct: 145 EVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGG 204
Query: 413 NFTAAI 418
+ T A+
Sbjct: 205 SHTIAL 210
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 199/367 (54%), Gaps = 30/367 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF WG G DG LG G D P +++ + VQ IACG H ++
Sbjct: 2 VFTWGRGE-DGQLG---------LGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD 51
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEVF+WG GRLGHG + P++ +L+ + V CG YHT AVT +GDLYTWG
Sbjct: 52 GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGG 111
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LGHG+E H PKRV L G V+ I+CG HTA+VT++G L+T+GD GV
Sbjct: 112 GMY--GKLGHGDEAGHATPKRVE-ALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168
Query: 215 LGHGDRKSVS-IPREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
GHG+ + +PR +ES+ R + +ACG +HTA V + +G+LFTWG
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACG-FHTAIVTD------------AGELFTWG 215
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G GRLGH + PT V +V +V+CG T ++ G +YT G +GQLG
Sbjct: 216 EGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLG 275
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + + P VE L FV +I CG H LT K VYTWG G +G+LGHG+
Sbjct: 276 HNDRVNKMTPTFVE-ALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKV 334
Query: 392 NSPSLVE 398
P VE
Sbjct: 335 AVPQAVE 341
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 182/327 (55%), Gaps = 20/327 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
VF+WG G+LG G SD P +DAL + ++ +ACG HT +T G+++TWG G
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG- 60
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHG+ +VP R+ L G V ++CG +HTA VT G L+T+G G +G LG
Sbjct: 61 -DDGRLGHGDNGWKYVP-RMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
HGD + P+ VE+L G + ACG HTA V +SG L+TWGD +
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIVT------------ASGALYTWGDKEN 166
Query: 277 GRLGHGDKEA-KLVPTCVAALVEPNFCRV-ACGHSLTVALTTSGHVYTMGSPVYGQLGN- 333
G GHG+ E + +P + ++ ++ ACG T +T +G ++T G +G+LG+
Sbjct: 167 GVAGHGETEGHQYLPRLLESMAAKRVAQISACGFH-TAIVTDAGELFTWGEGKFGRLGHM 225
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ + P V+ + K +++CG +H AV++ +YT+G G +G+LGH D ++ +
Sbjct: 226 SERNCHSPTIVDYMVGKK-PRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMT 284
Query: 394 PSLVEALKDKQVKSIACGTNFTAAICL 420
P+ VEAL V I CG + + A+ +
Sbjct: 285 PTFVEALDGMFVSQITCGWSHSVALTV 311
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+FTWG G+ G+LG GD + PT V AL ++ACG TV LTT G V+T G
Sbjct: 2 VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGD 61
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G+LG+ K R+ L+ V ++ CGSYH A +T ++YTWG G G+LGHGD
Sbjct: 62 DGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGD 121
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKW 423
+P VEAL V IACG+ TA + L+ W
Sbjct: 122 EAGHATPKRVEALVGATVAQIACGSRHTAIVTASGALYTW 161
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 12/145 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WGEG R+G + + P ++ V + ++CGG H A+V+
Sbjct: 209 GELFTWGEGK--------FGRLGHM--SERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVS 258
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G ++++G G+LGH + + P ++AL M + + CG H+ A+T+ G +YTW
Sbjct: 259 EDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTW 318
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVN 177
G+G + G LGHGN VP+ V
Sbjct: 319 GNG--DHGKLGHGNGRKVAVPQAVE 341
>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 1375
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 215/450 (47%), Gaps = 75/450 (16%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD ++WG G+ + S+ P +E + LDV +A G RHAALV
Sbjct: 249 GDCYVWGSSDA------GIPPAQGSICDRQQSATPAIVEDSTHLDVCQVAVGLRHAALVT 302
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ GEV++WG +GG+LG G +D P+ +D L I + G V+ G LYTW
Sbjct: 303 RSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAG----AVVSEEGFLYTW 358
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG G LG+ N + ++P+RV G L ++ +SCGP+H+A ++S G LFT+GDG
Sbjct: 359 GDGAA--GNLGYSNALRQFIPRRVEGTLLDHTITQVSCGPYHSAALSSTGALFTWGDGLC 416
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS-------------- 258
G LGHG S PR+V++LK R + ACGVWHTAA+ +G S
Sbjct: 417 GKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTAAIAAGPIGGSSLPSSLSELSFQEA 476
Query: 259 -----------SSSNCSSGKLFTWG--------------------DGDKGRLGHGDKEAK 287
S + G LFTWG D +G LGHGD
Sbjct: 477 EALRHKLSAAYSMLDEEGGALFTWGGHFTWVDHRKNSAGHPVDKRDHHRGCLGHGDTAGC 536
Query: 288 LVPTCVAALVEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVE 345
L PT V ++ R V CG +LTVALT G ++ MG G G+ A + V+
Sbjct: 537 LAPTRVGGALQGLAVRQVECGLNLTVALTADGRIWQMGE--TGAPGHKLAPWEGAREAVQ 594
Query: 346 GKLSKSFVEEIACGSYHVAVL-------TSKTE-------VYTWGKGANGRLGHGDTDDR 391
+ +VE IA G H A L T + E ++TWG+G G+LG G D
Sbjct: 595 VPIPDHYVERIAVGMQHAAALAGPLDGQTGRAEEGAECSVIFTWGRGREGQLGVGMHADS 654
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLH 421
P+ V+ L+ + V +ACG T A+C H
Sbjct: 655 AIPAPVDELRGRHVLQVACGGCHTLAVCRH 684
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE-------- 354
RV L V G Y GS G P A G + +R + + + VE
Sbjct: 234 RVTGAMGLPVPEQRPGDCYVWGS---SDAGIPPAQGSICDRQQ-SATPAIVEDSTHLDVC 289
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
++A G H A++T EVYTWG GA G+LG G D +P V+ L ++++SI G
Sbjct: 290 QVAVGLRHAALVTRSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAGAVV 349
Query: 415 TAAICLHKWVSGV 427
+ L+ W G
Sbjct: 350 SEEGFLYTWGDGA 362
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 148/425 (34%), Positives = 214/425 (50%), Gaps = 64/425 (15%)
Query: 106 GRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG 165
GR+GHG + D P++++AL ++ +ACG HT A +G LYTWG G G LGH
Sbjct: 156 GRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAGQ---GRLGHD 212
Query: 166 NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
+E ++P V+ L G V +CG HTA +T AG+++T+G G GVLGHGD + S
Sbjct: 213 HERDRFIPLEVSA-LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACST 271
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
PREV SL VV V+V ++ SG ++ WG +KG+LG GD+
Sbjct: 272 PREVASL-----------ALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFGDRT 320
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH--------VYTMGSPVYGQLGNPQAD 337
++ P +A L + R+AC + + H ++T G GQLG+ +
Sbjct: 321 PRMSPALLADL--SSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGHGTEE 378
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN-SPSL 396
+L R L + + +A G H A LTS+ EV+TWG G++G+LGHG R P L
Sbjct: 379 EELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLL 438
Query: 397 VEALKD-----------------------------------KQVKSIACGTNFTAAICLH 421
+E+LKD K+VK++ACG AA+ LH
Sbjct: 439 IESLKDSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAALVLH 498
Query: 422 KWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVC 481
W+ + ++C C+ PF R+RH+C NCG +FC SCSSK+ A + P RVC
Sbjct: 499 AWIPDEESTLCMACKAPFTMI-RRRHHCRNCGGLFCGSCSSKRI--ALLDAGFASPVRVC 555
Query: 482 DNCFN 486
D C +
Sbjct: 556 DRCHS 560
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSG 426
NGR+GHGD +D P +VEAL K V+ IACG TAA L+ W +G
Sbjct: 155 NGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAG 205
>gi|449476265|ref|XP_004154689.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 171
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 133/183 (72%), Gaps = 24/183 (13%)
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+V E FSWGEE GGRLGHG +SD HPKLIDALSN+ +ELVACGE HTCAVTLS DL
Sbjct: 6 VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDL 65
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
YTWGDGTYN +LGHGN+ SHW+P+RV TA+V AG+LF
Sbjct: 66 YTWGDGTYN-SVLGHGNDASHWIPRRV------------------TALVICAGKLF---- 102
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
TFG LGH DR S+SI +EVESLKGLRT RAACGVWHT AV+EV++GN + +N S GKLF
Sbjct: 103 -TFGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNSLGKLF 161
Query: 270 TWG 272
TWG
Sbjct: 162 TWG 164
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 48/188 (25%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+ F WGE G R+G G + D+ PK +++ L V+ +ACG H V
Sbjct: 12 EFFSWGEEYG--------GRLGH--GGESDAHHPKLIDALSNLKVELVACGECHTCAVTL 61
Query: 94 QGEVFSWGEES-GGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
++++WG+ + LGHG D+ P+ + AL V +G L+T
Sbjct: 62 SNDLYTWGDGTYNSVLGHGNDASHWIPRRVTAL-----------------VICAGKLFT- 103
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV------------TS 200
FG LGH + S + K V L+G+ + +CG WHT V S
Sbjct: 104 ------FGALGHKDRDSISISKEVE-SLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNS 156
Query: 201 AGQLFTFG 208
G+LFT+G
Sbjct: 157 LGKLFTWG 164
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 79/194 (40%), Gaps = 47/194 (24%)
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
VV + F++G+ G LGHG P+ +++L L+ ACG HT AV
Sbjct: 6 VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVT----- 60
Query: 257 NSSSSNCSSGKLFTWGDGDKGR-LGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
S L+TWGDG LGHG+ + +P V ALV
Sbjct: 61 -------LSNDLYTWGDGTYNSVLGHGNDASHWIPRRVTALV-----------------I 96
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVL-------- 366
+G ++T +G LG+ D ++ L ACG +H +AVL
Sbjct: 97 CAGKLFT-----FGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPN 151
Query: 367 ---TSKTEVYTWGK 377
S +++TWG+
Sbjct: 152 WNNNSLGKLFTWGR 165
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 27/155 (17%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+ F+WG+ GRLGHG + P + AL VACG T A+T S +YT G
Sbjct: 12 EFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDLYTWGDG 71
Query: 327 VYGQL---GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
Y + GN A +P RV A++ +++T+G L
Sbjct: 72 TYNSVLGHGN-DASHWIPRRV------------------TALVICAGKLFTFGA-----L 107
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GH D D + VE+LK + ACG T A+
Sbjct: 108 GHKDRDSISISKEVESLKGLRTARAACGVWHTIAV 142
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
V+ +E ++WG+ GRLGHG D + P L++AL + +V+ +ACG T A+ L
Sbjct: 6 VVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTL 61
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 211/395 (53%), Gaps = 33/395 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
++++WGE + G LGHG D+ HP +++AL +I VACG HT A++ G++++WG G
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSG 267
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA---GQLFTFGDGTF 212
Y G LG G+ + P R+ G LE ++++ ++C +H+A V + G LF+FG+ +
Sbjct: 268 -YG-GRLGQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDY 324
Query: 213 GVLG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG D+ S + V SL + R ACG +H+AA+ E G L+ W
Sbjct: 325 GQLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAE------------HGSLWLW 372
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAA---LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
G + G+LG+G+ + +P+ + A L VACG + +T G ++ G Y
Sbjct: 373 GCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTY 432
Query: 329 GQLG---NPQADGKLPNRVEGKL---SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
GQLG N D + V ++ + +ACG H AV+T E++TWG+G GR
Sbjct: 433 GQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGR 492
Query: 383 LGHGDTDDRNSPSLVE-ALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNN 441
LGHGD +R+ P+ +E ++ K V+ ++CG TA WV + C C+ F
Sbjct: 493 LGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQEVKTCMACKTRFTT 552
Query: 442 FKRKRHNCYNCGLVFCHSCSSKKSLKASM---APN 473
R+RH+C CG VFC +CSSK+ S+ APN
Sbjct: 553 V-RRRHHCRKCGGVFCGACSSKRVPILSLGYSAPN 586
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G V V ++YTWG+G NG LGHG+ P +VEAL K ++ +ACG T A+
Sbjct: 196 GQATVHVKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLAL 255
>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 783
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 205/412 (49%), Gaps = 45/412 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ LE LDV IA G RH + G V+SWGE +GG+LG D P ++ L
Sbjct: 65 PRVLEGTDTLDVVEIAIGARHGLARTRAGAVYSWGEGAGGKLGLPSAQDAEMPTRVE-LD 123
Query: 127 NMNIELVACGEYHTCAVTLS---------GDLYTWGDGTYNFGLLGHGN-EVSHWVPKRV 176
+ L ACG H+ AV GD WGD GLLG + P ++
Sbjct: 124 GRAVTL-ACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKI 182
Query: 177 NGPLE------GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
+ ++ G+ V +SCGP HTA VT G FT+G+G+F LGHGDR+ PRE+E
Sbjct: 183 SFAMDSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRAPRELE 242
Query: 231 SLKGLRTV--RAACGVWHTAAVVEV---------MVGNSSSSNCSSGKLFTWGDGDKGRL 279
+ + V R ACGVWHTAA+V +V + + G+LFTWGDG+ G+L
Sbjct: 243 TFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQL 302
Query: 280 GHGDKEAKLVPTCVA-ALVEP--NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-- 334
G E VPT + L +P C V+CG TVALT+ G V+ G G++ N
Sbjct: 303 GIRGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAG--CVGKVDNSLR 360
Query: 335 -QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD-DRN 392
+ +LPN G +S + G HV T V++WG G NGRLGHG D D+
Sbjct: 361 VKVFTRLPNFETGSVSA-----VESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDRDKA 415
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
+P +E+L+ + V IACG T++ C+ K + S RL + K+
Sbjct: 416 APEEIESLRGRTVLRIACGP--TSSACVLKPARMTTKQKASMVRLSTFSLKQ 465
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 133/328 (40%), Gaps = 83/328 (25%)
Query: 4 MAMDAFRVSLSSAVSSS----SQGSGHDDGDALGDVFIWGE-GTGDGVLGGGLNRVGSCF 58
+ +D V+L+ V+ S DGD GD +WG+ G+LG R + F
Sbjct: 120 VELDGRAVTLACGVAHSLAVVRDADASSDGDG-GDACVWGDPNAAPGLLGRPEARAVTFF 178
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
K+ ++ ++ + + V ++CG H A V + G F+WGE S LGHG
Sbjct: 179 PGKISFAM-DSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRA 237
Query: 119 PKLIDALSNMN--IELVACGEYHTCAV---------------------TLSGDLYTWGDG 155
P+ ++ N + VACG +HT A+ T+ G+L+TWGDG
Sbjct: 238 PRELETFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDG 297
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVVTSAG----------- 202
G LG VP + L G V ++SCG HT +TS G
Sbjct: 298 --ESGQLGIRGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAGCVGKV 355
Query: 203 -------------------------------------QLFTFGDGTFGVLGHG-DRKSVS 224
++F++G G G LGHG + + +
Sbjct: 356 DNSLRVKVFTRLPNFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDRDKA 415
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVE 252
P E+ESL+G +R ACG +A V++
Sbjct: 416 APEEIESLRGRTVLRIACGPTSSACVLK 443
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL---DVQNIACGGRHAA 89
G++F WG+G G LG GV+ ++S+P A + +V N++CG H
Sbjct: 289 GELFTWGDGES-GQLG--------IRGVE-EASVPTATSDQLGKPGSEVCNVSCGQHHTV 338
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM---NIELVACGEYHTCAVTLS 146
+ +G+V W G++ + L K+ L N ++ V G+ H A T
Sbjct: 339 ALTSKGDV--WLAGCVGKVDNS-----LRVKVFTRLPNFETGSVSAVESGDNHVVAATRD 391
Query: 147 GDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G +++WG G G LGHG N+ P+ + L G V I+CGP +A V ++
Sbjct: 392 GRVFSWGVGKN--GRLGHGKNDRDKAAPEEIES-LRGRTVLRIACGPTSSACVLKPARMT 448
Query: 206 T 206
T
Sbjct: 449 T 449
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 205/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
++ WG G DG G G D +P +E L V IACG H ++ +
Sbjct: 8 LYSWGRGE-DGQCGNGSTN---------DQEMPMPVEGLKHLTVVQIACGSGHTVVLTED 57
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+V+SWG GRLGH + P L+ AL+ +I+ V CG YHT A++ +G L+TWG
Sbjct: 58 KDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGG 117
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LGHGNEV H P RV + G V I+CG HTA + + G+++ +GD GV
Sbjct: 118 GMY--GKLGHGNEVGHPAPCRVEAFI-GREVEQIACGSRHTAALLAGGEVYCWGDRENGV 174
Query: 215 LGHGDR-KSVSIPREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G G+ + +P+++E+LKG++ + AACG +HTAA+ + G L++WG
Sbjct: 175 CGIGEAAEHQYLPKKLEALKGVKITQIAACG-FHTAAITQ------------DGALWSWG 221
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G GRLG G+++ ++ P CV L +VACG + +T G V T G +GQLG
Sbjct: 222 EGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLG 281
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ + + L + + ++ CG H L+ +V+T+G G +G+LGHG
Sbjct: 282 HGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSA 341
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAIC 419
P LVE+L + +V +A T A+C
Sbjct: 342 LPKLVESLANMKVAKVASYNEHTVALC 368
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 239/468 (51%), Gaps = 48/468 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WGEGT G+LG G + + P+ +E+ + D++ + G H +
Sbjct: 160 DVYTWGEGT-RGMLG---------HGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAV 209
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
GEV+SWG GGRLG G + D P + L +I +AC E H+ AV +G+ Y WG
Sbjct: 210 SGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG 269
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G G LG + H P +++ L+G V +CG T V +G+++ G+ G
Sbjct: 270 RGID--GSLGVEGD-KHVSPTQIHA-LDGKRVVHAACGAAFTLFVIESGEVYACGNNEHG 325
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G +++S P V +L R VR ACG H A+ E +G+L+ WG
Sbjct: 326 QLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSE------------TGRLYAWGA 372
Query: 274 GDKGRLGHGDK-EAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G+ E +L P V + +V + ACG + T+ L+ SG +Y GS GQL
Sbjct: 373 HSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQL 432
Query: 332 G-------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G N LPN EG+ + I+CG A ++ + ++YTWG GA+ LG
Sbjct: 433 GLGPLATKNQATPAALPNP-EGRKYTA----ISCGQDISAAVSDRGKIYTWGSGASNALG 487
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKR 444
D + +P+L+E++ DK+ +++ACG AA +H WV + + C C+L F R
Sbjct: 488 LPDGRTKYAPTLIESMADKRCRTVACGFFHMAATIIHGWVPDDEATQCMACKLKFTTI-R 546
Query: 445 KRHNCYNCGLVFCHSCSSKK--SLKASMAPNPNKPYRVCDNCFNKLRK 490
+RH+C CG +FC +CS+KK L+A + + RVCD C+ L +
Sbjct: 547 RRHHCRKCGGIFCGNCSAKKFPLLEAGFS----ESVRVCDKCYVILSR 590
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 116/282 (41%), Gaps = 62/282 (21%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
I G + A ++T+G+GT G+LGHG+ + PR VE+L G G HT
Sbjct: 145 IDKGSTRVLIREDASDVYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHT 204
Query: 248 AAVV---EV------------------------MVG-------------NSSSSNCSSGK 267
A+ EV + G N S + +G+
Sbjct: 205 MALAVSGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGE 264
Query: 268 LFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+ WG G G LG GDK PT + AL ACG + T+ + SG VY G+
Sbjct: 265 AYVWGRGIDGSLGVEGDKHVS--PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNN 322
Query: 327 VYGQLG--------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+GQLG P LP R + IACG+ H L+ +Y WG
Sbjct: 323 EHGQLGIGSNEAMSEPTLVTNLPER---------IVRIACGNSHAVALSETGRLYAWGAH 373
Query: 379 ANGRLGHGD-TDDRNSPSLVEA-LKDKQVKSIACGTNFTAAI 418
++G+LG G+ +DR SP VE+ + V ACG N T +
Sbjct: 374 SSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNHTIIL 415
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 181/326 (55%), Gaps = 18/326 (5%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V++WG GRLGHG + P+L +L+ I V CG YHT AV+ G+L+TWG
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LGHGNE H PKRV+ L G+ V I+CG HTA+VTS G L+T+GD GV
Sbjct: 86 GMY--GKLGHGNESGHSTPKRVD-SLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGV 142
Query: 215 LGHGDRKSVSI-PREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
GHGD + P+ +E L G R V+ +ACG +HT + + +G+++TWG
Sbjct: 143 AGHGDTEGHQYTPKLLERLSGKRVVQLSACG-FHTGCLTD------------AGEVYTWG 189
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G GRLGHG + P V L+ +++CG + +T G +YT G +GQLG
Sbjct: 190 EGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLG 249
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ K+ + L F+ +I CG H LTS EVYTWG G +G+LGHG +
Sbjct: 250 HGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVS 309
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
+P LVE L ++V +A TA +
Sbjct: 310 TPQLVEKLVGQKVVCVASYNEHTACL 335
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 180/341 (52%), Gaps = 26/341 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G DG LG G N G K L +L V+ ++ CG H A V+
Sbjct: 26 GGVYTWGRGD-DGRLGHGDN------GWKYVPRLTHSLAGQVI---THVTCGSYHTAAVS 75
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+G +F+WG G+LGHG +S PK +D+L + + +ACG HT VT G LYTW
Sbjct: 76 SKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTW 135
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD G+ GHG+ H ++ L G V +S +HT +T AG+++T+G+G F
Sbjct: 136 GDK--ENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG ++ PR VE+L G R V+ +CG +H+A V + GK++T+G
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVT------------ADGKMYTFG 241
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+ G+LGHGDK K+ PT V L ++ CG S +VALT+S VYT G+ +G+LG
Sbjct: 242 GGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG 301
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
+ P VE KL V +A + H A L V
Sbjct: 302 HGCGKKVSTPQLVE-KLVGQKVVCVASYNEHTACLVEPHSV 341
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 164/299 (54%), Gaps = 24/299 (8%)
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G +YTWG G + G LGHG+ +VP R+ L G ++ ++CG +HTA V+S G
Sbjct: 23 THGGGVYTWGRG--DDGRLGHGDNGWKYVP-RLTHSLAGQVITHVTCGSYHTAAVSSKGN 79
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
LFT+G G +G LGHG+ S P+ V+SL GL V ACG HTA V
Sbjct: 80 LFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVT------------ 127
Query: 264 SSGKLFTWGDGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRV-ACGHSLTVALTTSGHVY 321
S G L+TWGD + G GHGD E + P + L ++ ACG T LT +G VY
Sbjct: 128 SRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFH-TGCLTDAGEVY 186
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
T G +G+LG+ + + P VE L K V +I+CG +H AV+T+ ++YT+G G +
Sbjct: 187 TWGEGKFGRLGHGAERNCHSPRLVETLLGKRPV-QISCGGFHSAVVTADGKMYTFGGGEH 245
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSGC 435
G+LGHGD ++ P+LV+ L + I CG + + A+ ++ W +G + GC
Sbjct: 246 GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGC 304
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 196/365 (53%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G D P L + ++ ++ CG H A + E
Sbjct: 32 WGRGE-DGQLG---------HGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTE 81
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG GRLGHG SD+L PK I AL + I +ACG+ H AVT+ G++ +WG
Sbjct: 82 VYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWG--R 139
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ EGI + ++ G HTA VT G+LF +G G +G LG
Sbjct: 140 NQNGQLGLGTTEDSLVPQKIQ-AFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLG 198
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR +P++V S+ G + V ACG HT +V S G L+T+G
Sbjct: 199 LGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISV------------SSLGGLYTYGWSKY 246
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHGD E +LVP + AL N +++ G T+ALTT G +Y G +GQ+G
Sbjct: 247 GQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDN 306
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P +++ + ++ I+CG H +T K V++WG+G NG+LGHG++ DRN+P
Sbjct: 307 IDHCSPIQIKFPQDQKVIQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPM 365
Query: 396 LVEAL 400
++EAL
Sbjct: 366 ILEAL 370
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 178/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D L P + AL I V CG HT
Sbjct: 13 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72
Query: 141 CAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A +++ ++Y+WG G +FG LGHGN PK + L G+ + I+CG H VT
Sbjct: 73 TAYSVARTEVYSWGWG--DFGRLGHGNSSDLLTPKPIK-ALHGLKIRQIACGDSHCLAVT 129
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG G + +P+++++ +G+ A G HTAAV E
Sbjct: 130 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------- 182
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G+LF WG G G LG GD+ +LVP V+++ VACG T+++++ G
Sbjct: 183 -----DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG 237
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ + +L P+R+E L + +I+ G H LT+ ++Y WG
Sbjct: 238 LYTYGWSKYGQLGHGDFEDRLVPHRLE-ALRGDNISQISGGWRHTMALTTDGKLYGWGWN 296
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G GD D SP ++ +D++V I+CG T A+
Sbjct: 297 KFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 336
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 155/303 (51%), Gaps = 25/303 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V+ WG G R+G G D PK +++ L ++ IACG H V
Sbjct: 81 EVYSWGWGD--------FGRLG--HGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+GEV SWG G+LG G D L P+ I A ++I++VA G HT AVT G+L+ WG
Sbjct: 131 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWG 190
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ VP++V+ ++G + ++CG HT V+S G L+T+G +G
Sbjct: 191 WGRY--GNLGLGDRNDRLVPQKVS-SVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 247
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD + +P +E+L+G + + G HT A+ + GKL+ WG
Sbjct: 248 QLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALT------------TDGKLYGWGW 295
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G++G GD P + + +++CG T+A+T +V++ G GQLG+
Sbjct: 296 NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGH 355
Query: 334 PQA 336
++
Sbjct: 356 GES 358
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
++ G S +VAL + V + G GQLG+ A+ +L L + + CG+ H
Sbjct: 13 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72
Query: 364 -AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
A ++TEVY+WG G GRLGHG++ D +P ++AL +++ IACG + A+ +
Sbjct: 73 TAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P ++ V I+CG RH V + VFS
Sbjct: 285 TTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFS 344
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D P +++ALS
Sbjct: 345 WGRGTNGQLGHGESVDRNTPMILEALS 371
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 225/424 (53%), Gaps = 29/424 (6%)
Query: 16 AVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
+ + ++G+G D+ D VF+WG G LGG C G K+ S P +++
Sbjct: 2852 TLRNENKGTGIDNTDIDSRVFVWGLN-DKGQLGG-------CKGSKVKS--PTEMKNIAA 2901
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L +IA G + +V G+V+ GE + GRLG G ++ P +D L+ ++ V
Sbjct: 2902 LRPVSIAGGSKTVFIVTYDGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTV 2961
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
G H+ +T G +++WG+G G LGHG+ S P + LE + I+CG
Sbjct: 2962 HPGGRHSLCITREGKVFSWGEGID--GKLGHGDVTSRLSPTLIEA-LESKLIVEIACGSS 3018
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+A VT+ G+L+T+G G +G LGHGD K++ IP++V++L+ + + ACG +
Sbjct: 3019 HSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLA-- 3076
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+ +NC +++WGDGD G+LG G E +P + AL + CR+ACG ++A
Sbjct: 3077 ----LTDNNC----VWSWGDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLA 3128
Query: 314 LTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
L+T+G V+T G Y +LG+ + + P +EG L K + EIA G+ H +T EV
Sbjct: 3129 LSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEV 3188
Query: 373 YTWGKGANGRLGHGDTDDRNSPSL-VEALKDKQVKSIACGTNFTAAIC--LHKWVSGVDQ 429
Y+WG +G+ G+G+T P + + L ++ IACG++ + A C L VS V
Sbjct: 3189 YSWGDNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSHSIAWCGNLQLTVSYVPV 3248
Query: 430 SMCS 433
M S
Sbjct: 3249 PMLS 3252
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 202/387 (52%), Gaps = 31/387 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
++WG G LGG G K+ S + + +A L +A G + ++ +G
Sbjct: 3773 YVWGHN-HRGQLGG-------VQGTKVKSPVINDIIAA--LRPTAVAGGEQTLFILTSEG 3822
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWG 153
+V++ G GRLG G +++ P +I+ L ++ IE ++ G H +T + ++++WG
Sbjct: 3823 KVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWG 3882
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
DG G LGHG+++S P+++ L G + ISCG H+A +TS G+L+T+G G +G
Sbjct: 3883 DG--EDGKLGHGDKLSSETPRKIEALL-GKQIVHISCGSSHSAAITSKGELYTWGKGRYG 3939
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LGHGD P+ +E+LK + + ACG T A+ + +C +++W
Sbjct: 3940 RLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITD--------DDC----VWSW 3987
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G + P + +L+ C+V CG +VALT +G +YT G Y +L
Sbjct: 3988 GDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRL 4047
Query: 332 GNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ D + P +V K V +A GS H T EV+TWG G+LG+G +
Sbjct: 4048 GHGTNDHVRRPRKVACLQGKQIV-TVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNP 4106
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV L++ ++ + CG+ + A
Sbjct: 4107 IPEPTLVTVLENVKLNRVGCGSAHSFA 4133
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 149/289 (51%), Gaps = 27/289 (9%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF WG+G DG LG G K+ S P+ +E+ + + +I+CG H+A +
Sbjct: 3877 EVFSWGDGE-DGKLG---------HGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITS 3926
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLYT 151
+GE+++WG+ GRLGHG D L PKL++AL + + VACG + T A+T +++
Sbjct: 3927 KGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWS 3986
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WGDG Y G LG G P R+ L G+ V + CG + +T G L+T+G G
Sbjct: 3987 WGDGDY--GKLGRGGSDGCKKPLRIES-LIGMAVCKVECGSQFSVALTKNGDLYTWGKGD 4043
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+ LGHG V PR+V L+G + V A G H A + +G++FTW
Sbjct: 4044 YYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTD------------AGEVFTW 4091
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
GD D+G+LG+G PT V L RV CG + + A +T +
Sbjct: 4092 GDNDEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPI 4140
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 158/316 (50%), Gaps = 26/316 (8%)
Query: 67 PKALESAVVLDVQNIACG--GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL-HPKLID 123
P L+S + + ++ IA G H ++ G V+SWG GGRLGHG D+ P+L+
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHG---DIRREPELVK 558
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
L N I +ACG ++ AVT +G+LYTWG G+Y G LGHGN +P V G L G
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSY--GRLGHGNSEDRLLPTLVAG-LSGS 615
Query: 184 HVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
HV ++CG HT + G ++++GDG +G LG G +P+ VE+LK
Sbjct: 616 HVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKH------- 668
Query: 242 CGVWHTAAVVEVMVGNSSSSNC-SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
H +V V+ G+ S G ++TWG D RLGHG + P V L+ +
Sbjct: 669 ----HNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYH 724
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G S +ALT + ++T GS V + P + ++K F+ +ACG
Sbjct: 725 IVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISA-INKEFIAGVACGP 783
Query: 361 YHVAVLTS--KTEVYT 374
+ TS K E+ T
Sbjct: 784 AQNFLWTSGGKLEIET 799
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 184/392 (46%), Gaps = 52/392 (13%)
Query: 46 VLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
VLG G +N +G G D SL K E+ L ++ I C + + G V+S
Sbjct: 442 VLGWGNINWLG---GESNDGSL-KIYETVAELGIKQIMCSSDNIIALTNNGRVYS----- 492
Query: 105 GGRLGHGVDSDVLHPKLIDALSNMNIELVAC---GEYHTCAVTLSGDLYTWGDGTYNFGL 161
L + + P L+D+L ++ I+ +A GE H A++ G +Y+WG G + G
Sbjct: 493 ---LAYNARCEA--PVLLDSLIDIKIKKIAANVEGE-HYLALSSDGCVYSWGSG--DGGR 544
Query: 162 LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
LGHG+ P+ V L ++ I+CG ++A VTS G+L+T+G G++G LGHG+ +
Sbjct: 545 LGHGDIRRE--PELVK-ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSE 601
Query: 222 SVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
+P V L G V ACG HT A+ + G +++WGDGD G+L
Sbjct: 602 DRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDK------------DGIVWSWGDGDYGKL 649
Query: 280 GHGDKEAKLVPTCVAALVEPN--FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD 337
G G + VP V L N V CG +VAL G V+T G +LG+ D
Sbjct: 650 GRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLD 709
Query: 338 G-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSL 396
+ P VEG ++ V+ IA G H LT +++TWG D + P+
Sbjct: 710 HVRYPKMVEGLINYHIVD-IAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNM-EPTC 767
Query: 397 VEALKDKQVKSIACG--TNFTAAICLHKWVSG 426
+ A+ + + +ACG NF W SG
Sbjct: 768 ISAINKEFIAGVACGPAQNFL-------WTSG 792
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 160/340 (47%), Gaps = 47/340 (13%)
Query: 90 LVNKQGEVFSWGEES--GGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
L + EV WG + GG G K+ + ++ + I+ + C + A+T +G
Sbjct: 435 LSTPKTEVLGWGNINWLGGESNDG------SLKIYETVAELGIKQIMCSSDNIIALTNNG 488
Query: 148 DLYTWGDGTYNFG-----LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+Y+ YN LL ++ K++ +EG H ++S S G
Sbjct: 489 RVYSLA---YNARCEAPVLLDSLIDIK---IKKIAANVEGEHYLALS----------SDG 532
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++++G G G LGHGD + P V+ L + + ACG ++AAV
Sbjct: 533 CVYSWGSGDGGRLGHGDIRRE--PELVKELVNKKITQIACGSTYSAAVT----------- 579
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHV 320
S+G+L+TWG G GRLGHG+ E +L+PT VA L + VACG + T+A+ G V
Sbjct: 580 -SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIV 638
Query: 321 YTMGSPVYGQLGNPQADG-KLPNRVEG-KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
++ G YG+LG +D K+P VE K ++ + CGS L V+TWGK
Sbjct: 639 WSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKS 698
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG D P +VE L + + IA G + A+
Sbjct: 699 DGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLAL 738
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 134/291 (46%), Gaps = 30/291 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G G G LG G R P+ ++ V + IACG ++A V
Sbjct: 532 GCVYSWGSGDG-GRLGHGDIR-----------REPELVKELVNKKITQIACGSTYSAAVT 579
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
GE+++WG S GRLGHG D L P L+ LS ++ VAC G+ HT A+ G ++
Sbjct: 580 SNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVW 639
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+WGDG Y G LG G VPK V ++ ++ CG + + G ++T+G
Sbjct: 640 SWGDGDY--GKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGK 697
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHG V P+ VE L V A G H A+ + NC ++F
Sbjct: 698 SDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTD---------NC---QIF 745
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
TWG D + + PTC++A+ + VACG + T+ G +
Sbjct: 746 TWG-SDVQKYALSSDNYNMEPTCISAINKEFIAGVACGPAQNFLWTSGGKL 795
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 23/286 (8%)
Query: 149 LYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
Y WG + G LG G +V V +N + + ++++ G ++TS G+++
Sbjct: 3772 FYVWGHN--HRGQLGGVQGTKVKSPV---INDIIAALRPTAVAGGEQTLFILTSEGKVYA 3826
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
G G G LG G ++ P +E L+ L+ + + H+ G + S+
Sbjct: 3827 SGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSV---HSG-------GRHAMVLTSNF 3876
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++F+WGDG+ G+LGHGDK + P + AL+ ++CG S + A+T+ G +YT G
Sbjct: 3877 EVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKG 3936
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLG 384
YG+LG+ D L ++ L V ++ACGS +T V++WG G G+LG
Sbjct: 3937 RYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLG 3996
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
G +D P +E+L V + CG+ F+ A+ L+ W G
Sbjct: 3997 RGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKG 4042
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 28/250 (11%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G G LG V P E++++ LR V A G T +V
Sbjct: 2870 RVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGS-KTVFIVTY--------- 2919
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH---SLTVALTTSGH 319
GK++ G+G GRLG G+ E +P + L +F + H ++ +T G
Sbjct: 2920 --DGKVYVSGEGANGRLGLGNTENISIPVQLDTL-NMHFVKKVTVHPGGRHSLCITREGK 2976
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G + G+LG+ +L P +E SK VE IACGS H A +T+ E+YTWG G
Sbjct: 2977 VFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVE-IACGSSHSAAVTADGELYTWGLG 3035
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN------FTAAICLHKWVSG----VD 428
GRLGHGD+ + P V+AL+D +V IACG+ T C+ W G +
Sbjct: 3036 DYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLG 3095
Query: 429 QSMCSGCRLP 438
+ GC +P
Sbjct: 3096 RGGSEGCNIP 3105
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 110/228 (48%), Gaps = 20/228 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG+G G LG G D PK LE+ V ++ACG A +
Sbjct: 3928 GELYTWGKGRY-GRLGHGDGD---------DCLKPKLLEALKSYKVIDVACGSGDAQTLA 3977
Query: 93 KQGE--VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ V+SWG+ G+LG G P I++L M + V CG + A+T +GDLY
Sbjct: 3978 ITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLY 4037
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
TWG G Y LGHG P++V L+G + +++ G H T AG++FT+GD
Sbjct: 4038 TWGKGDYY--RLGHGTNDHVRRPRKV-ACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDN 4094
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACG-----VWHTAAVVEV 253
G LG+G + P V L+ ++ R CG W T A +++
Sbjct: 4095 DEGQLGNGTLNPIPEPTLVTVLENVKLNRVGCGSAHSFAWSTEAPIDI 4142
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 264 SSGKLFTWGDGDKGRLG--HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S+ K + WG +G+LG G K V + A + P VA G LT+ G VY
Sbjct: 3768 SNHKFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPT--AVAGGEQTLFILTSEGKVY 3825
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGA 379
G G+LG ++D + + L +E+++ G H VLTS EV++WG G
Sbjct: 3826 ASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGE 3885
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+G+LGHGD +P +EAL KQ+ I+CG++ +AAI L+ W G
Sbjct: 3886 DGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKG 3936
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 18/175 (10%)
Query: 290 PTCVAALVEPNFCRVACG----HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE 345
P + +L++ ++A H L AL++ G VY+ GS G+LG+ D + +
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYL--ALSSDGCVYSWGSGDGGRLGH--GDIRREPELV 557
Query: 346 GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQV 405
+L + +IACGS + A +TS E+YTWG+G+ GRLGHG+++DR P+LV L V
Sbjct: 558 KELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHV 617
Query: 406 KSIACGTNFTAAICLHK------WVSGVDQSMCSG----CRLPFNNFKRKRHNCY 450
+ACG+ + + K W G + G C++P K HN Y
Sbjct: 618 VDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKY 672
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 205/386 (53%), Gaps = 24/386 (6%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
WG G+G + G G N G G++ +P A+ES L I G + V G+
Sbjct: 3177 WG-GSGT-IYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGK 3234
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGD 154
+++ G + GRLG G V P L++++ +++I+ VA G H A+++ G++Y+WG+
Sbjct: 3235 LYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGE 3294
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHGN P RV L G V I+CG H+A VTS+G+L+T+G G +G
Sbjct: 3295 G--EDGKLGHGNRTQCDRP-RVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGR 3351
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWG 272
LGHGD + P+ ++LKG R + ACG S + C S +++WG
Sbjct: 3352 LGHGDSEDQLRPKMADALKGYRVIDVACG------------SGDSQTLCISDDDNVWSWG 3399
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + VP V AL C+V CG ++ALT SG VYT G Y +LG
Sbjct: 3400 DGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLG 3459
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ D + P +V K + IA GS H + + EVYTWG G+LG G T+
Sbjct: 3460 HGSDDHVRRPRKVAALQGKKII-SIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAI 3518
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAA 417
P +V AL+DK++ ++ACG+ T A
Sbjct: 3519 QRPRIVTALQDKKITNVACGSAHTVA 3544
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 207/405 (51%), Gaps = 30/405 (7%)
Query: 19 SSSQGSGHDDG---DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
SS Q S D G + VF+WG D ++G G K+ + + S+
Sbjct: 2189 SSRQRSAGDHGGSREIQTKVFVWGLNDKD--------QLGGPRGSKIKTPVLNEFLSS-- 2238
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V A G + +V +G+V++ GE + GRLG G +V PK ++ LS ++ VA
Sbjct: 2239 LKVVCCAGGSKSLFVVTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAV 2298
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
G H A+T+ G +++WG+G + G LGH + ++ P+ + L+ + I+CG
Sbjct: 2299 HSGGRHAMALTVDGKVFSWGEG--DDGKLGHLSRMNCEKPRLLEA-LKTKRIRDIACGSS 2355
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+A VTS+G+L+T+G G +G LGHGD + P+ V++L G R ++ ACG +
Sbjct: 2356 HSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTL--- 2412
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+ G +++WGDGD G+LG G E VP V L ++ CG ++A
Sbjct: 2413 -------TLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLA 2465
Query: 314 LTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LT +G V+T G Y +LG+ + + P EG K + +A G+ H +T +V
Sbjct: 2466 LTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKII-HVAVGALHCLAVTDTGQV 2524
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ WG +G+ G G T P+LV+ L+ ++ +ACG++ + A
Sbjct: 2525 FAWGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTA 2569
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 174/339 (51%), Gaps = 19/339 (5%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G H Q +VF WG +LG S + P L + LS++ + A G V
Sbjct: 2195 AGDHGGSREIQTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVV 2254
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAG 202
T G +Y G+GT G LG G+ + +PK+VNG + + ++ G H +T G
Sbjct: 2255 TAEGKVYACGEGTN--GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDG 2312
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F++G+G G LGH R + PR +E+LK R ACG H+AAV
Sbjct: 2313 KVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVT----------- 2361
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHV 320
SSG+L+TWG G+ GRLGHGD +L P V ALV +VACG + T+ LT G V
Sbjct: 2362 -SSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMV 2420
Query: 321 YTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
Y+ G +G+LG ++G +P+ VE +L+ V +I CG+ LT +V+TWGKG
Sbjct: 2421 YSWGDGDFGKLGRGGSEGCSVPHNVE-RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGD 2479
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG P + E LK K++ +A G A+
Sbjct: 2480 YFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAV 2518
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 153/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR P+ +ES +V +IACGG H+A V
Sbjct: 3287 GEVYSWGEGE-DGKLGHG-NRT--------QCDRPRVIESLRGKEVIDIACGGAHSACVT 3336
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
GE+++WG+ GRLGHG D L PK+ DAL + VAC G+ T ++ +++
Sbjct: 3337 SSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVW 3396
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP++V+ L I V + CG + +T +G ++T+G G
Sbjct: 3397 SWGDGDY--GKLGRGGSDGCKVPQKVDA-LSSIGVCKVECGSQFSIALTKSGCVYTWGKG 3453
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
+ LGHG V PR+V +L+G + + A G H A CS G+++
Sbjct: 3454 DYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDQGEVY 3500
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P V AL + VACG + TVA +TS
Sbjct: 3501 TWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTS 3548
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 159/310 (51%), Gaps = 20/310 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
S P LES + ++ +A GG+HA ++ +GEV+SWGE G+LGHG + P++I
Sbjct: 3255 STPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVI 3314
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L + +ACG H+ VT SG+LYTWG G Y G LGHG+ PK + L+G
Sbjct: 3315 ESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRY--GRLGHGDSEDQLRPKMADA-LKG 3371
Query: 183 IHVSSISCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
V ++CG T ++ ++++GDG +G LG G +P++V++L + +
Sbjct: 3372 YRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKV 3431
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 3432 ECGSQFSIALTK------------SGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKK 3479
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + G VYT G GQLG+ + R+ L + +ACGS
Sbjct: 3480 IISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGS 3539
Query: 361 YH-VAVLTSK 369
H VA TSK
Sbjct: 3540 AHTVAWSTSK 3549
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 148/298 (49%), Gaps = 28/298 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG L+R M+ P+ LE+ +++IACG H+A V
Sbjct: 2312 GKVFSWGEGD-DGKLGH-LSR--------MNCEKPRLLEALKTKRIRDIACGSSHSAAVT 2361
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + L PKL+ AL + VACG + T +T G +Y
Sbjct: 2362 SSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVY 2421
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G VP V L G V I CG + +T AGQ++T+G G
Sbjct: 2422 SWGDG--DFGKLGRGGSEGCSVPHNVER-LNGQGVIQIECGAQFSLALTKAGQVWTWGKG 2478
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V P+ E LKG + + A G H AV + +G++F
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTD------------TGQVFA 2526
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA-LTTSGHVYTMGSPV 327
WGD D G+ G G P V L RVACG S + A TT + +M PV
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTAWATTDTAIPSMHEPV 2584
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP + L + I G VT+ G+L+
Sbjct: 3180 SGTIYGWGHN--HRGQLGGIEGAKVKVPTAIES-LTSLRPIQIVGGEQTLFAVTADGKLY 3236
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G G G LG G SVS P +ES++ + H V G + +
Sbjct: 3237 ATGYGASGRLGIGGTDSVSTPTLLESIQHV----------HIKKVAVNSGGKHALALSVE 3286
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G++++WG+G+ G+LGHG++ P + +L +ACG + + +T+SG +YT G
Sbjct: 3287 GEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGK 3346
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRL 383
YG+LG+ ++ +L ++ L V ++ACGS ++ V++WG G G+L
Sbjct: 3347 GRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKL 3406
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSG 426
G G +D P V+AL V + CG+ F+ A+ C++ W G
Sbjct: 3407 GRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKG 3453
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 14/190 (7%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVY 321
+ GK++ G+G GRLG G + +P V L + +VA G +ALT G V+
Sbjct: 2256 AEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVF 2315
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G G+LG+ + + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 2316 SWGEGDDGKLGHLSRMNCEKPRLLEA-LKTKRIRDIACGSSHSAAVTSSGELYTWGLGEY 2374
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL------HKWVSG----VDQS 430
GRLGHGD+ + P LV+AL K+V +ACG+ + L + W G + +
Sbjct: 2375 GRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG 2434
Query: 431 MCSGCRLPFN 440
GC +P N
Sbjct: 2435 GSEGCSVPHN 2444
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G +R+G G P+ + + + +IA G H +
Sbjct: 3445 GCVYTWGKGD--------YHRLG--HGSDDHVRRPRKVAALQGKKIISIATGSLHCVACS 3494
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
QGEV++WG+ G+LG G + + P+++ AL + I VACG HT A + S L+
Sbjct: 3495 DQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 287 KLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNR 343
+L P V+ L E F +A G + T+A+T +G +++ G+ YG+LG +DG KLP
Sbjct: 5 QLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKL 64
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
V+ KL CG+ +LT VYT
Sbjct: 65 VD-KLQGQHAVIACCGNQFSVILTKTGTVYT 94
Score = 45.4 bits (106), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 166 NEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
N PK V+G E +H++ + T VT G LF+FG+G +G LG G
Sbjct: 1 NSDDQLTPKLVSGLKEQKFVHIA-LGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGC 59
Query: 224 SIPREVESLKGLRTVRAACG 243
+P+ V+ L+G V A CG
Sbjct: 60 KLPKLVDKLQGQHAVIACCG 79
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 115 DVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
D L PKL+ L +A G + T AVT +G L+++G+G Y G LG G +
Sbjct: 4 DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDY--GKLGRGGSDGCKL 61
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
PK V+ L+G H CG + ++T G ++T
Sbjct: 62 PKLVD-KLQGQHAVIACCGNQFSVILTKTGTVYT 94
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+G LF++G+GD G+LG G + +P V L + CG+ +V LT +G VYT
Sbjct: 37 TGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCGNQFSVILTKTGTVYT 94
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 59/147 (40%), Gaps = 14/147 (9%)
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
V+ G QLG P+ + LS V A GS + V+T++ +VY G+G
Sbjct: 2208 VFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL------HKWVSGVDQSM-- 431
NGRLG G + + + P V L VK +A + A+ L W G D +
Sbjct: 2268 NGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGH 2327
Query: 432 -----CSGCRLPFNNFKRKRHNCYNCG 453
C RL K KR CG
Sbjct: 2328 LSRMNCEKPRL-LEALKTKRIRDIACG 2353
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 202/368 (54%), Gaps = 33/368 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK +E + D+Q IA G H+ + K G+V+S+G GRLGHG L PK I+ LS
Sbjct: 71 PKKIEG--LSDIQAIAAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLS 128
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+I+ +A G++H+ A+T SGD+Y++G+GT LGHGN PK++ + V
Sbjct: 129 --DIQAIAAGDFHSLALTKSGDVYSFGNGTSG---LGHGNTEDQSTPKKIESLSD---VQ 180
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+I+ G H+ +T +G +++FG G FG LGHGD S P+++E L ++ + A
Sbjct: 181 AIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSDIQAIAAG----- 235
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
GN S + SG ++++G G G+LGHGD E +L P + L +
Sbjct: 236 ---------GNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQAVAAGA 286
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAV 365
HSL ALT SG VY+ G GQLG+ D +L P ++EG ++ IA G +H
Sbjct: 287 NHSL--ALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD---IQAIAAGDFHSLA 341
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
LT +VY++G G +G LGHGDT ++ P +E L D +++IA G N + A+ + + S
Sbjct: 342 LTKSGDVYSFGNGTSG-LGHGDTANQLEPKKIEGLTD--IQAIAAGANHSLALAVEEQDS 398
Query: 426 GVDQSMCS 433
+D S
Sbjct: 399 TIDPDEAS 406
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 194/324 (59%), Gaps = 30/324 (9%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
VFS+G G+LGHG ++ L PK I+ LS+ I+ +A G H+ A+T SGD+Y++G G
Sbjct: 49 VFSFGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGL 106
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
FG LGHGN S PK++ G + + +I+ G +H+ +T +G +++FG+GT G LG
Sbjct: 107 --FGRLGHGNTDSQLEPKKIEGLSD---IQAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
HG+ + S P+++ESL ++ + A GN S + SG ++++G G
Sbjct: 161 HGNTEDQSTPKKIESLSDVQAIAAG--------------GNHSLALTKSGDVYSFGFGLF 206
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
GRLGHGD +++L P + L + +A G + ++ALT SG VY+ G ++GQLG+
Sbjct: 207 GRLGHGDTDSQLEPKKIEDL--SDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDT 264
Query: 337 DGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
+ +L P ++E S ++ +A G+ H LT EVY++G+G G+LGHGDTDD+ +P
Sbjct: 265 ENQLTPKKIE---DLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPK 321
Query: 396 LVEALKDKQVKSIACGTNFTAAIC 419
+E LKD +++IA G + A+
Sbjct: 322 KIEGLKD--IQAIAAGDFHSLALT 343
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 151/282 (53%), Gaps = 35/282 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDV+ +G GT G G D S PK +ES + DVQ IA GG H+ +
Sbjct: 147 GDVYSFGNGTS-----------GLGHGNTEDQSTPKKIES--LSDVQAIAAGGNHSLALT 193
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V+S+G GRLGHG L PK I+ LS +I+ +A G H+ A+T SGD+Y++
Sbjct: 194 KSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLS--DIQAIAAGGNHSLALTKSGDVYSF 251
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G + G LGHG+ + PK++ + + +++ G H+ +T +G++++FG G
Sbjct: 252 GWGLH--GQLGHGDTENQLTPKKIEDLSD---IQAVAAGANHSLALTKSGEVYSFGRGNT 306
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD P+++E LK ++ + A G +H+ A+ + SG ++++G
Sbjct: 307 GQLGHGDTDDQLTPKKIEGLKDIQAI--AAGDFHSLALTK------------SGDVYSFG 352
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+G G LGHGD +L P + L + HSL +A+
Sbjct: 353 NGTSG-LGHGDTANQLEPKKIEGLTDIQAIAAGANHSLALAV 393
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%), Gaps = 9/166 (5%)
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ S +N + +F++G G G+LGHGD +L P + L + HSL AL
Sbjct: 36 LAQESETNANLVSVFSFGMGMYGKLGHGDTANQLAPKKIEGLSDIQAIAAGTNHSL--AL 93
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T SG VY+ G ++G+LG+ D +L P ++EG S ++ IA G +H LT +VY
Sbjct: 94 TKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEG---LSDIQAIAAGDFHSLALTKSGDVY 150
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
++G G +G LGHG+T+D+++P +E+L D V++IA G N + A+
Sbjct: 151 SFGNGTSG-LGHGNTEDQSTPKKIESLSD--VQAIAAGGNHSLALT 193
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N + +P A S Q + CG ++
Sbjct: 4001 DVYLWGAGRHGQLAEAGRNVM-----------IPAAAPS--FSPAQQVVCGQNCTFVIQA 4047
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G
Sbjct: 4108 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4164
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----------STDGSMVWA 4213
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4271
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ F+E+IA G+ H L+S +VY WG + G+LG G T
Sbjct: 4272 IGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 4331
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4332 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4360
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ SS D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKLASSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIINVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVGGLDGIAIQQISAGTSHSLA 732
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 4001 DVYLWGAGRHGQLAEA-GRNVMIPAAAPSFSPA--QQVVCGQNCTFVIQANGTVLACGEG 4057
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4058 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GKLFT+G
Sbjct: 4115 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 4162
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + TVA++T G V+ G YG+L
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL 4222
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4223 GLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4281
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ IA G T A+
Sbjct: 4282 HNRPQQVPLLAGVFIEDIAVGAEHTLAL 4309
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 135/289 (46%), Gaps = 46/289 (15%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4078 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4136
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG +
Sbjct: 4137 EEVVQMSCGFKHSAVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQ 4193
Query: 188 ISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CG HT V++ G + + FGDG +G LG G+ + S P++V+ L G+ + ACG
Sbjct: 4194 VACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQF 4253
Query: 247 TAAVV---------------------------------------EVMVGNSSSSNCSS-G 266
+ A+ ++ VG + SS G
Sbjct: 4254 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTG 4313
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
++ WG +G+LG G PT V L N +++ G + A T
Sbjct: 4314 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4362
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 152/305 (49%), Gaps = 38/305 (12%)
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
V+ + ++Y WG + + L G + PK + + +I G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNSSH--QLVEGTQEKILQPKLASSFSDA---QTIEAGQYCTFVISTDG 422
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G G++G LG GD + S +++ S+K + + + + G HT A
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTT 316
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A+T
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 317 SGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYT 374
G +YT G +G+LG+ ++ + +P V+ ++ V E++CGS H L+ V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN---VGEVSCGSSHTIALSKDGRTVWS 585
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQS 430
+G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ ++ W G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--- 642
Query: 431 MCSGC 435
C GC
Sbjct: 643 -CLGC 646
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ + +N+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALESAV 74
V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEALQ 612
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIELV 133
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I +
Sbjct: 613 GMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGP 192
+ G+ H A++ ++Y WG+ + G G GN PK+V G L+GI + IS G
Sbjct: 671 SIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVGG-LDGIAIQQISAGT 727
Query: 193 WHTAVVTS 200
H+ T+
Sbjct: 728 SHSLAWTA 735
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
Length = 4860
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N + +P A S Q + CG ++
Sbjct: 3997 DVYLWGAGRHGQLAEAGRNVM-----------VPVAAPS--FSQAQQVVCGQNCTFVIQA 4043
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4160
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----------STDGSMVWA 4209
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + LS F+E+IA G+ H L+S +VY WG + G+LG G T
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 4327
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ L+ K ++ I+ G +AA
Sbjct: 4328 NHVREPTLITVLQGKNIRQISAGRCHSAA 4356
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLA 732
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 168/328 (51%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + A S + V CG+ T + +G + G+G
Sbjct: 3997 DVYLWGAGRHGQLAEA-GRNVMVP--VAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEG 4053
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4054 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GKLFT+G
Sbjct: 4111 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 4158
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + TVA++T G V+ G YG+L
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKL 4218
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4219 GLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4277
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ IA G T A+
Sbjct: 4278 HNRPQQVPVLSGVFIEDIAVGAEHTLAL 4305
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4150 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSM-VW 4208
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT A+ S+G ++ WG
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL------------SSTGDVYAWG 4315
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT + L N +++ G + A T
Sbjct: 4316 SNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4358
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L + +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVSIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 195/363 (53%), Gaps = 26/363 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +IACG H +V + G +F++G G+LG G + P + AL I VA G
Sbjct: 37 VTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGR 96
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+HT AVT S LY++G G+ G LGHG+E +P + LE V+ I+CG +H+A
Sbjct: 97 FHTLAVTDSNKLYSFGQGSE--GALGHGDETDLNMPTSIES-LEDKDVNIIACGGYHSAA 153
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T G+L+ +G + G LG + ++S P ++ G + ACG +HTA V
Sbjct: 154 ITKNGELYIWGSNSEGQLGLKN-DTISYPTMLDL--GKSVISVACGYYHTAVVT------ 204
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+ GKL+T+G+ + G+LG GD EA K+ V + +VACG + TVALT
Sbjct: 205 ------ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTA 258
Query: 317 SGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
SG VYT GS GQ LG+ D +P VE LSK ++ IACG H AV++ K E++T
Sbjct: 259 SGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEA-LSKRKIKHIACGESHTAVVSDKGELFT 317
Query: 375 WGKGANGRLGHGDTDDRN--SPSLVEALKDKQVKSIACGTNFTAAIC--LHKWVSGVDQS 430
+G G +G+LG GD N P V+ LK+ V IACG T C + K +G D +
Sbjct: 318 FGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDN 377
Query: 431 MCS 433
S
Sbjct: 378 ESS 380
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 190/368 (51%), Gaps = 48/368 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F +G G LG G N+ + P +++ + ++A G H V
Sbjct: 54 GRLFTFGNNEW-GQLGIGSNKT---------RNKPTTVKALKPEKITHVAAGRFHTLAVT 103
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+++S+G+ S G LGHG ++D+ P I++L + ++ ++ACG YH+ A+T +G+LY W
Sbjct: 104 DSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIW 163
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G + G LG N+ + P ++ G V S++CG +HTAVVT+ G+L+TFG+
Sbjct: 164 GSNSE--GQLGLKNDTISY-PTMLD---LGKSVISVACGYYHTAVVTADGKLYTFGETEG 217
Query: 213 GVLGHGDRKS--VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG GD ++ V+ P+ V+ + G + V+ ACG HT A+ +SG+++T
Sbjct: 218 GKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALT------------ASGQVYT 264
Query: 271 WGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
+G G G+LG G K +P V AL + +ACG S T ++ G ++T G +G
Sbjct: 265 FGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHG 324
Query: 330 QLGNPQADGKLPNRVE----GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
+LG Q D N + +L + V IACG H V +K + +L +
Sbjct: 325 KLG--QGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKID----------KLAN 372
Query: 386 GDTDDRNS 393
GD D+ +S
Sbjct: 373 GDDDNESS 380
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 120/266 (45%), Gaps = 60/266 (22%)
Query: 198 VTSAGQLFTFGDGTF------------------------------------------GVL 215
+ G +FTFG F G L
Sbjct: 8 IPETGAVFTFGKSRFGDNRTNKFWIRSDKVTDIACGDEHTVVVTENGRLFTFGNNEWGQL 67
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G G K+ + P V++LK + A G +HT AV + S KL+++G G
Sbjct: 68 GIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTD------------SNKLYSFGQGS 115
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
+G LGHGD+ +PT + +L + + +ACG + A+T +G +Y GS GQLG
Sbjct: 116 EGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKN 175
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN--S 393
P ++ L KS + +ACG YH AV+T+ ++YT+G+ G+LG GD +
Sbjct: 176 DTISYPTMLD--LGKSVI-SVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTK 232
Query: 394 PSLVEALKDKQVKSIACGTNFTAAIC 419
P +V+ + K VK +ACG N T A+
Sbjct: 233 PKVVKGISGKVVK-VACGGNHTVALT 257
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 195/365 (53%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G D LP L + + +IACG H A + E
Sbjct: 37 WGRGE-DGQLG---------HGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNE 86
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++SWG GRLGHG SD+L P+ I AL + I+ +ACG+ H AVT+ G++ +WG
Sbjct: 87 LYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRN- 145
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ +G+ + ++ G H+ +T G+L+ +G G +G LG
Sbjct: 146 -QNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 203
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR IP +V S+ + V ACG HT +V S G L+T+G
Sbjct: 204 LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV------------SSLGGLYTYGWSKY 251
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHG+ E LVP + AL + +V+ G ++ALT++G +Y G +GQ+G
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDN 311
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P +V+ + V+ I+CG H +T K V++WG+G NG+LGHGDT DRNSP
Sbjct: 312 VDRCSPVQVKFPHDQKVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPK 370
Query: 396 LVEAL 400
++EAL
Sbjct: 371 IIEAL 375
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H + V SWG G+LGHG D L P + AL I+ +ACG HT
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77
Query: 141 CAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + S +LY+WG G +FG LGHGN +P+ + L+G+ + I+CG H VT
Sbjct: 78 LAYSESRNELYSWGWG--DFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 134
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG G + +P+++++ +G+ A G H+ A+ E
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+G+L+ WG G G LG GD+ + +P V+++ VACG T+++++ G
Sbjct: 188 -----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P +++ LS + +++ G H LTS +Y WG
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGWN 301
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G GD DR SP V+ D++V I+CG T A+
Sbjct: 302 KFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 195/365 (53%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G D LP L + + +IACG H A + E
Sbjct: 37 WGRGE-DGQLG---------HGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNE 86
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++SWG GRLGHG SD+L P+ I AL + I+ +ACG+ H AVT+ G++ +WG
Sbjct: 87 LYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRN- 145
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ +G+ + ++ G H+ +T G+L+ +G G +G LG
Sbjct: 146 -QNGQLGLGTSEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 203
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR IP +V S+ + V ACG HT +V S G L+T+G
Sbjct: 204 LGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISV------------SSLGGLYTYGWSKY 251
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHG+ E LVP + AL + +V+ G ++ALT++G +Y G +GQ+G
Sbjct: 252 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDN 311
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P +V+ + V+ I+CG H +T K V++WG+G NG+LGHGDT DRNSP
Sbjct: 312 VDRCSPVQVKFPHDQKVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPK 370
Query: 396 LVEAL 400
++EAL
Sbjct: 371 IIEAL 375
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H + V SWG G+LGHG D L P + AL I+ +ACG HT
Sbjct: 18 ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77
Query: 141 CAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + S +LY+WG G +FG LGHGN +P+ + L+G+ + I+CG H VT
Sbjct: 78 LAYSESRNELYSWGWG--DFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 134
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG G + +P+++++ +G+ A G H+ A+ E
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+G+L+ WG G G LG GD+ + +P V+++ VACG T+++++ G
Sbjct: 188 -----NGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P +++ LS + +++ G H LTS +Y WG
Sbjct: 243 LYTYGWSKYGQLGHGNFEDSLVPQKLQ-ALSDKLISQVSGGWRHSMALTSTGLLYGWGWN 301
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G GD DR SP V+ D++V I+CG T A+
Sbjct: 302 KFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Anolis carolinensis]
Length = 4963
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 203/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG G + G N V S P S Q + CG ++
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNAV----------SPPP---SPSFCQAQQVICGQNCTFVIQA 4135
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4136 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4195
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G
Sbjct: 4196 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4252
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + ACG+ HT V + ++
Sbjct: 4253 DYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVV-----------STDGSMVWA 4301
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4302 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4359
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + LS FVE+IA G+ H L++ +VY WG + G+LG G T
Sbjct: 4360 IGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHT 4419
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV +L+ K V+ I+ G +AA
Sbjct: 4420 NHVREPTLVTSLQGKSVRQISAGRCHSAA 4448
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVIST 422
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 423 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 482
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 483 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 540
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 541 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 587
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 647
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 648 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 706
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 707 PITKPKKVSGLDGVAIQQISAGTSHSLA 734
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG G+L + V P + S + V CG+ T + +G + G+G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNAVSPPP---SPSFCQAQQVICGQNCTFVIQANGTVLACGEG 4145
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4146 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GKLFT+G
Sbjct: 4203 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 4250
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P VAAL VACG + T+ ++T G V+ G YG+L
Sbjct: 4251 NGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKL 4310
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4311 GLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4369
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V AL V+ IA G T A+
Sbjct: 4370 HNRPQQVPALSGVFVEDIAVGAEHTLAL 4397
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 153/306 (50%), Gaps = 26/306 (8%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4166 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4224
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG +
Sbjct: 4225 EEVVQMSCGFKHSAVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVAA-LEGYQIGE 4281
Query: 188 ISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CG HT VV++ G + + FGDG +G LG G+ + S P++V+ L G+ + ACG
Sbjct: 4282 VACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQF 4341
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+ A+ + G ++T+G L G P V AL +A
Sbjct: 4342 SVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAV 4389
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G T+AL+ SG VY GS GQLG N + L ++GK V +I+ G H
Sbjct: 4390 GAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGK----SVRQISAGRCH 4445
Query: 363 VAVLTS 368
A +S
Sbjct: 4446 SAAWSS 4451
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 25/305 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4192 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4241
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT V+ G + W
Sbjct: 4242 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSM-VW 4300
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4301 AFGDGDYGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4359
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V +L G+ A G HT A+ +SG ++ WG
Sbjct: 4360 IGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLAL------------SASGDVYAWG 4407
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+G+LG G PT V +L + +++ G + A ++ G V QL
Sbjct: 4408 SNSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAAWSSPPVPPRAPGVSVPLQL 4467
Query: 332 GNPQA 336
G P A
Sbjct: 4468 GLPDA 4472
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 409 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 468
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 469 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 516
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 517 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 573
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 574 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 633
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 634 TGQVYAWGCGA----CLGC 648
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 463 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 513
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 514 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 568
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 569 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 626
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 627 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 682
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 683 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 732
Query: 312 VALT 315
+A T
Sbjct: 733 LAWT 736
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 563 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 612
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 613 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 670
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 671 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVAIQQISA 727
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 728 GTSHSLAWTA 737
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
gallopavo]
Length = 4334
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N + +P A S Q + CG ++
Sbjct: 3471 DVYLWGAGRHGQLAEAGRNVM-----------VPVAAPS--FSQAQQVVCGQNCTFVIQA 3517
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 3518 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3577
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G
Sbjct: 3578 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 3634
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 3635 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----------SMDGSMVWA 3683
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 3684 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 3741
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + LS F+E+IA G+ H L+S +VY WG + G+LG G T
Sbjct: 3742 IGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 3801
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ L+ K ++ I+ G +AA
Sbjct: 3802 NHVREPTLITVLQGKNIRQISAGRCHSAA 3830
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLA 732
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + A S + V CG+ T + +G + G+G
Sbjct: 3471 DVYLWGAGRHGQLAEA-GRNVMVP--VAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEG 3527
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 3528 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3584
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GKLFT+G
Sbjct: 3585 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 3632
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + TVA++ G V+ G YG+L
Sbjct: 3633 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKL 3692
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 3693 GLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 3751
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ IA G T A+
Sbjct: 3752 HNRPQQVPVLSGVFIEDIAVGAEHTLAL 3779
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 3574 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 3623
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV++ G + W
Sbjct: 3624 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSM-VW 3682
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 3683 AFGDGDYGKLGLGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3741
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT A+ S+G ++ WG
Sbjct: 3742 IGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLAL------------SSTGDVYAWG 3789
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT + L N +++ G + A T
Sbjct: 3790 SNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 3832
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L + +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC-----GHSLTVALTTSG 318
++G + G+G GRLG G+ + V T ++AL ++ GHS+ ALT SG
Sbjct: 3517 ANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSM--ALTESG 3574
Query: 319 HVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
V++ G YG+LG+ +D + P ++E L V +++CG H AV+T+ +++T+G
Sbjct: 3575 EVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGN 3633
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLG G+T ++ P V AL+ Q+ +ACG N T A+ +
Sbjct: 3634 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSM 3676
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVSIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 196/365 (53%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G D LP L + + +IACG H A + E
Sbjct: 38 WGRGE-DGQLG---------HGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNE 87
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++SWG GRLGHG SD+L P+ I AL + I+ +ACG+ H AVT+ G++ +WG
Sbjct: 88 LYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWG--R 145
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG GN VP+++ +G+ + ++ G H+ +T G+L+ +G G +G LG
Sbjct: 146 NQNGQLGLGNTEDSLVPQKIQA-FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 204
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR P +V S+ + V ACG HT +V SSG ++T+G
Sbjct: 205 LGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISV------------SSSGGIYTYGWSKY 252
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHG+ E LVP + AL + +V+ G ++ALT++G ++ G +GQ+G
Sbjct: 253 GQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDN 312
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P +V+ + V+ I+CG H +T K V++WG+G NG+LGHGDT DRNSP
Sbjct: 313 LDHCSPVQVKFPQDQRVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPK 371
Query: 396 LVEAL 400
++EAL
Sbjct: 372 IIEAL 376
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 46 VLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
+ G G N+ G G +D P ++ V I+CG RH V ++ VFSWG +
Sbjct: 296 LFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGT 355
Query: 105 GGRLGHGVDSDVLHPKLIDALS 126
G+LGHG D PK+I+ALS
Sbjct: 356 NGQLGHGDTIDRNSPKIIEALS 377
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/389 (35%), Positives = 204/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG G + G N + +P S Q + CG ++
Sbjct: 3979 DVFLWGAGRHGQLAEAGRNVM-----------IPSGAGS--FSQAQQVICGQNCTFVIQA 4025
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4026 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4085
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G
Sbjct: 4086 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4142
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+GL + ACG+ HT AV + ++
Sbjct: 4143 DYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV-----------SADGSLVWA 4191
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4192 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4249
Query: 331 LGNPQADGKLPNRVE--GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L F+++IA G+ H L++ EVY WG + G+LG G T
Sbjct: 4250 IGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHT 4309
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV AL+ K ++ I+ G +AA
Sbjct: 4310 NHVREPTLVTALQGKNIRQISAGRCHSAA 4338
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/397 (31%), Positives = 192/397 (48%), Gaps = 50/397 (12%)
Query: 34 DVFIWG--------EGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGG 85
+V++WG EGT + +L ++ CF D Q I G
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ---PKLAPCFS-----------------DAQTIEAGQ 412
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCA 142
+++ G V + G+ S GRLG G ++ K + + +I+ V+ + HT A
Sbjct: 413 YCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLA 472
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G++++WGDG Y G LGHGN + PK + G L+G V +S G H+A VT G
Sbjct: 473 FTTEGEVFSWGDGDY--GKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+L+T+G+G FG LGHGD S +IP V+ + + V +CG HT A+ +
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK---------- 578
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC-GHSLTVALTTSGHVY 321
++++G GD G+LGHGD P V AL + F R C G ++ALT++G VY
Sbjct: 579 -DGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEAL-QGMFTRKVCAGSQSSLALTSTGQVY 636
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G
Sbjct: 637 AWGCGACLGCGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695
Query: 382 RLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ G G+ T P V L ++ I+ GT+ + A
Sbjct: 696 QCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLA 732
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3979 DVFLWGAGRHGQLAEA-GRNVMIPSGAGSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4035
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4036 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4092
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GKLFT+G
Sbjct: 4093 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 4140
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL + +VACG + T+A++ G V+ G YG+L
Sbjct: 4141 NGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKL 4200
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4201 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4259
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P LV L + IA G T A+
Sbjct: 4260 HNRPQLVPVLLGIFIDDIAVGAEHTLAL 4287
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 46/291 (15%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4056 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4114
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG+H+
Sbjct: 4115 EEVVQMSCGFKHSAVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGLHIGQ 4171
Query: 188 ISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CG HT V++ G L + FGDG +G LG G+ + S P++V+ L G+ + ACG
Sbjct: 4172 VACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4231
Query: 247 TAAV------------------------------VEVMVG----------NSSSSNCSSG 266
+ A+ V V++G + + +SG
Sbjct: 4232 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASG 4291
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+++ WG +G+LG G PT V AL N +++ G + A T +
Sbjct: 4292 EVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWTAA 4342
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P +VEAL+ + + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 146/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGTLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFTRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVVEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ + + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 42 TGDG-VLGGGLNR-VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG V G +R +G G + + P+ + + + + +IA G H ++ GEV++
Sbjct: 4236 TKDGHVYTFGQDRLIGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYA 4295
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
WG S G+LG G + V P L+ AL NI ++ G H+ A T
Sbjct: 4296 WGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCHSAAWT 4340
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 193/365 (52%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G + D +P L S V V ++ CG H A + + +
Sbjct: 45 WGRGE-DGQLGHGDSE---------DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQ 94
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++SWG GRLGHG SDV +P+ I AL M I+ +ACG+ H VT +G +++WG
Sbjct: 95 LYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWG--R 152
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG GN +P+++ EG+ V I+ G HT +T G L+ +G G +G LG
Sbjct: 153 NQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLG 211
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
DR S+P +V S++G + V ACG H+ +V SSG L+T+G
Sbjct: 212 LSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV------------SSSGALYTYGWSKY 259
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHGD + LVP + AL + +++ G T+A+ G +Y G +GQ+G
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P V + V+ +ACG H LT +++WG+GA+G+LGHG+ DRN+P
Sbjct: 320 VDHCSPVEVNFPDEQKIVQ-VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPK 378
Query: 396 LVEAL 400
+++AL
Sbjct: 379 MIDAL 383
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 44 DGVL-GGGLNRVGSCFGVK--MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
DG L G G N+ G GV+ +D P + + +ACG RH + + +FSW
Sbjct: 300 DGKLYGWGWNKFGQ-VGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSW 358
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALS 126
G + G+LGHG D PK+IDALS
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMIDALS 384
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 205 bits (521), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 202/390 (51%), Gaps = 31/390 (7%)
Query: 16 AVSSSSQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE--S 72
AV S G+ H G+V WG G DG LG G D +P L
Sbjct: 23 AVVLVSAGASHSVALLAGNVLCSWGRGE-DGQLG---------HGDAEDRLVPTVLSGFD 72
Query: 73 AVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
A + ++ CG H A + +V+SWG GRLGHG SDV P+ + AL + I+
Sbjct: 73 AAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIK 132
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+ACG+ H AVT++G++ +WG G LG G +P+++ EG+ V I+ G
Sbjct: 133 QIACGDSHCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQS-FEGVCVKMIAAG 189
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
HTA VT G L+ +G G +G LG GDR +P +V S++G + V ACG HT V
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITV- 248
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
SSG L+T+G G+LGHGD E LVP + AL + + +++ G T
Sbjct: 249 -----------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHT 297
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
+ALT+ G +Y G +GQ+G D P +V+ + V ++ACG H T K
Sbjct: 298 MALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQK-VAQVACGWRHTLAFTEKK 356
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
V++WG+G +G+LGHG+ DRN P +++AL
Sbjct: 357 NVFSWGRGTSGQLGHGEIVDRNKPVMIDAL 386
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 181/354 (51%), Gaps = 24/354 (6%)
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM--NI 130
AVVL ++ G H+ + + SWG G+LGHG D L P ++ I
Sbjct: 23 AVVL----VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGI 78
Query: 131 ELVACGEYHTCAVTL-SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
V CG HT A + +Y+WG G +FG LGHGN + P+ V L+GI + I+
Sbjct: 79 TSVICGADHTTAYSEDEQQVYSWGWG--DFGRLGHGNSSDVFTPQPVKA-LQGIKIKQIA 135
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG H VT AG++ ++G G LG G + +P++++S +G+ A G HTAA
Sbjct: 136 CGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAA 195
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
V E G L+ WG G G LG GD+ +LVP V+++ +ACG
Sbjct: 196 VTE------------DGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWR 243
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T+ +++SG +YT G YGQLG+ + L P+++E L S + +I+ G H LTS
Sbjct: 244 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSSISQISGGWRHTMALTS 302
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
++Y WG G++G GDTDD P V+ +D++V +ACG T A K
Sbjct: 303 DGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKK 356
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEG-KLSKSFVEEI 356
P V+ G S +VAL + + G GQLG+ A+ +L P + G + + +
Sbjct: 22 PAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81
Query: 357 ACGSYHVAVLTS-KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
CG+ H + + +VY+WG G GRLGHG++ D +P V+AL+ ++K IACG +
Sbjct: 82 ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141
Query: 416 AAICL 420
A+ +
Sbjct: 142 LAVTM 146
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G D P ++ V +ACG RH ++ VFS
Sbjct: 301 TSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFS 360
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D P +IDALS
Sbjct: 361 WGRGTSGQLGHGEIVDRNKPVMIDALS 387
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 203/399 (50%), Gaps = 29/399 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVF-IWGEGTGDGVLGGGLNRVGSCFGVKMD 63
A+ A AV S G+ H G+V WG G DG LG G D
Sbjct: 4 ALSAVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGE-DGQLG---------HGDAED 53
Query: 64 SSLPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
+P + + ++ CG H A + +V+SWG GRLGHG +DV P+ +
Sbjct: 54 RLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPV 113
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
AL + I+ +ACG+ H AVT++G++ +WG G LG G +P+ + EG
Sbjct: 114 KALQGIKIKQLACGDSHCLAVTMAGEVLSWGRN--QNGQLGLGTTEDSLLPQTIQA-FEG 170
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
I V I+ G HTA VT G ++ +G G +G LG GDR +P +V S++G + V AC
Sbjct: 171 ISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVAC 230
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G HT V SSG L+T+G G+LGHGD E LVP V AL + +
Sbjct: 231 GWRHTITV------------SSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTS 278
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+++ G T+ALT+ G +Y G +GQ+G AD P +V + V ++ACG
Sbjct: 279 QISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQK-VAQVACGWR 337
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
H T K V+ WG+G +G+LGHG+ DRN+P +++AL
Sbjct: 338 HTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 183/366 (50%), Gaps = 25/366 (6%)
Query: 62 MDSSLPKALESA---VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
MD++L + A VVL ++ G H+ + + +WG G+LGHG D L
Sbjct: 1 MDAALSAVADEAPPAVVL----VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV 56
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTL-SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P +I I V CG HT A + +Y+WG G +FG LGHGN + P+ V
Sbjct: 57 PTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWG--DFGRLGHGNSTDVFTPQPVK 114
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L+GI + ++CG H VT AG++ ++G G LG G + +P+ +++ +G+
Sbjct: 115 A-LQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISV 173
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A G HTAAV E G ++ WG G G LG GD+ + VP V+++
Sbjct: 174 KMIAAGAEHTAAVTE------------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVE 221
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEI 356
VACG T+ +++SG +YT G YGQLG+ + L P++VE L S +I
Sbjct: 222 GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQI 280
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
+ G H LTS ++Y WG G++G GD D SP+ V ++++V +ACG T
Sbjct: 281 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTL 340
Query: 417 AICLHK 422
A K
Sbjct: 341 AFTEKK 346
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G D P + V +ACG RH ++ VF+
Sbjct: 291 TSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFA 350
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D P +IDALS
Sbjct: 351 WGRGTSGQLGHGEIVDRNTPVIIDALS 377
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 193/365 (52%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G + D +P L S V V ++ CG H A + + +
Sbjct: 45 WGRGE-DGQLGHGDSE---------DRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQ 94
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++SWG GRLGHG SDV +P+ I AL M I+ +ACG+ H VT +G +++WG
Sbjct: 95 LYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWG--R 152
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG GN +P+++ EG+ V I+ G HT +T G L+ +G G +G LG
Sbjct: 153 NQNGQLGLGNNQDSLLPQKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLG 211
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
DR S+P +V S++G + V ACG H+ +V SSG L+T+G
Sbjct: 212 LSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSV------------SSSGALYTYGWSKY 259
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHGD + LVP + AL + +++ G T+A+ G +Y G +GQ+G
Sbjct: 260 GQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN 319
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P V + V+ +ACG H LT +++WG+GA+G+LGHG+ DRN+P
Sbjct: 320 VDHCSPVEVNFPDEQKIVQ-VACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPK 378
Query: 396 LVEAL 400
+++AL
Sbjct: 379 MIDAL 383
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 44 DGVL-GGGLNRVGSCFGVK--MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
DG L G G N+ G GV+ +D P + + +ACG RH + + +FSW
Sbjct: 300 DGKLYGWGWNKFGQ-VGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSW 358
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALS 126
G + G+LGHG D PK+IDALS
Sbjct: 359 GRGASGQLGHGEIIDRNTPKMIDALS 384
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3991 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4037
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4098 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4203
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4261
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4321
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4322 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4350
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3991 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4047
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4048 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4105 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4152
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4212
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4213 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4273 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4299
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4094 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4144 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4202
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4203 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4261
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4309
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4310 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3983 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4029
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4090 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4195
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4253
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4254 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4313
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4314 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4342
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3983 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4039
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4040 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4097 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4144
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4204
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4205 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4265 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4291
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4086 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4136 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4194
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4195 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4253
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4254 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4301
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4302 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4344
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3961 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4007
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4067
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4068 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4124
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4125 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4173
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4174 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4231
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4232 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4291
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4292 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4320
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3961 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4017
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4018 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4074
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4075 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4122
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4123 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4182
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4183 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4243 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4269
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4064 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4113
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4114 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4172
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4173 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4231
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4232 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4279
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4280 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4322
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3987 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4033
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4034 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4093
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4094 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4150
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4151 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4199
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4200 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4257
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4258 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4317
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4318 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4346
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3987 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4043
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4044 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4100
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4101 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4148
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4149 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4208
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4209 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4267
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4268 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4295
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4090 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4139
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4140 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4198
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4199 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4257
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4258 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4305
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4306 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4348
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 183/340 (53%), Gaps = 17/340 (5%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LP+ + + ++ +ACG H A + ++SWG GRLGHG SD+ P
Sbjct: 44 DRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP 103
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I AL + I +ACG+ H AVT G++Y+WG G LG G+ VP ++ E
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWG--RNQNGQLGLGDTDDSLVPHKLL-AFE 160
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V ++ G HTA VT +G+L+ +G G +G LG GDR +P EV ++ + A
Sbjct: 161 GVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVA 220
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HT AV + SGKL+T+G G+LGHGD L+P VAAL E N
Sbjct: 221 CGWRHTIAVSQ------------SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNI 268
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS 360
+V+ G TVALT +G +Y G +GQ+G+ D P + V +++CG
Sbjct: 269 TQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGW 328
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
H +T K VY+WG+G +G+LGHGD DR++P ++AL
Sbjct: 329 RHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 183/341 (53%), Gaps = 19/341 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H + V S+G G+LGHG D L P++I AL++ I LVACG HT
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHT 69
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + + +Y+WG G +FG LGHGN +VP + L+G+ + I+CG H VT
Sbjct: 70 TAYSATRLTIYSWGWG--DFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHCLAVT 126
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G+++++G G LG GD +P ++ + +G+ A G HTAAV +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD------- 179
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
SGKL+ WG G G LG GD+ +++P V A+ + C VACG T+A++ SG
Sbjct: 180 -----SGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ AD LP++V L++ + +++ G H LT ++Y WG
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQV-AALAEFNITQVSGGWRHTVALTEAGKLYGWGWN 293
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQ-VKSIACGTNFTAAI 418
G++G GD DD SP L+ Q V ++CG T A+
Sbjct: 294 KFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 150/304 (49%), Gaps = 28/304 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
++ WG G R+G G D +P +++ L+++ IACG H V
Sbjct: 79 IYSWGWGD--------FGRLG--HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTAD 128
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV+SWG G+LG G D L P + A ++++++A G HT AVT SG LY WG
Sbjct: 129 GEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGW 188
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ +P V P G + ++CG HT V+ +G+L+T+G +G
Sbjct: 189 GRY--GNLGLGDRGDRMLPAEV--PAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD +P +V +L + + G HT A+ E +GKL+ WG
Sbjct: 245 QLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE------------AGKLYGWGW 292
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G++G GD + P ++ + +V+CG TVA+T +VY+ G GQLG
Sbjct: 293 NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLG 352
Query: 333 NPQA 336
+ A
Sbjct: 353 HGDA 356
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 46 VLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
+ G G R G+ G + D LP + + + +ACG RH V++ G+++++G
Sbjct: 183 LYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSK 242
Query: 105 GGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN-FGLLG 163
G+LGHG +D L P + AL+ NI V+ G HT A+T +G LY WG +N FG +G
Sbjct: 243 YGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWG---WNKFGQVG 299
Query: 164 HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
G+ H P+ ++ P + V +SCG HT VT ++++G GT G LGHGD
Sbjct: 300 SGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDR 359
Query: 224 SIPREVESL 232
S P+ +++L
Sbjct: 360 SAPKGIQAL 368
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
V ++CG RH V + V+SWG + G+LGHG D PK I ALS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3993 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4039
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4100 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4205
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4263
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4264 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4323
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4324 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4352
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3993 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4049
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4050 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4107 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4154
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4215 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4273
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4274 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4301
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4096 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4145
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4146 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4204
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4205 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4263
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4264 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4311
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4312 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 38/308 (12%)
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T V+ + ++Y WG + + L G + PK + +I G + T V++
Sbjct: 365 TPIVSETCEVYVWGSNSSH--QLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVM 254
+ G + G G++G LG GD + S +++ S+K + + + + G HT A
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 474
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVA 313
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A
Sbjct: 475 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TE 371
+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS H L+
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRT 582
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ ++ W G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 428 DQSMCSGC 435
C GC
Sbjct: 643 ----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4280 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4306
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3990 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4036
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4097 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4202
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4260
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4261 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4320
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4321 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4349
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3990 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4046
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4047 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4104 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4151
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4211
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4212 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4272 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4298
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4093 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4143 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4201
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4202 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4260
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4261 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4308
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4309 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4351
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 208/389 (53%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3995 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4041
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4042 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4101
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4102 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4158
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV SS+ S ++
Sbjct: 4159 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV---------SSDGS--MVWA 4207
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4208 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4265
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4266 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4325
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4326 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4354
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 189/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3995 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4051
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4052 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4108
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4109 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4156
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A+++ G V+ G YG+L
Sbjct: 4157 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKL 4216
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4217 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4275
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4276 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4303
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 136/289 (47%), Gaps = 46/289 (15%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4072 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4130
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG +
Sbjct: 4131 EEVVQMSCGFKHSAVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQ 4187
Query: 188 ISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CG HT V+S G + + FGDG +G LG G+ + S P++V+ L G+ + ACG
Sbjct: 4188 VACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4247
Query: 247 TAAVV---------------------------------------EVMVGNSSS-SNCSSG 266
+ A+ +V VG + + S+G
Sbjct: 4248 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTG 4307
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
++ WG +G+LG G PT V L N +++ G + A T
Sbjct: 4308 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4356
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + +R V ++ G
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGS 466
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 571
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 632 TGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 182/340 (53%), Gaps = 17/340 (5%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
D LP+ + + ++ +ACG H A + ++SWG GRLGHG SD+ P
Sbjct: 44 DRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHP 103
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I AL + I +ACG+ H AVT G++Y+WG G LG G+ VP ++ E
Sbjct: 104 IKALQGLEIRQIACGDSHCLAVTADGEVYSWG--RNQNGQLGLGDTDDSLVPHKLL-AFE 160
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G+ V ++ G HTA VT G+L+ +G G +G LG GDR +P EV ++ + A
Sbjct: 161 GVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVA 220
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HT AV + SGKL+T+G G+LGHGD L+P VAAL E N
Sbjct: 221 CGWRHTIAVSQ------------SGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNI 268
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS 360
+V+ G TVALT +G +Y G +GQ+G+ D P + V +++CG
Sbjct: 269 TQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGW 328
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
H +T K VY+WG+G +G+LGHGD DR++P ++AL
Sbjct: 329 RHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 181/341 (53%), Gaps = 19/341 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H + V S+G G+LGHG D P++I AL++ I LVACG HT
Sbjct: 10 VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHT 69
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + + +Y+WG G +FG LGHGN +VP + L+G+ + I+CG H VT
Sbjct: 70 TAYSATRLTIYSWGWG--DFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHCLAVT 126
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G+++++G G LG GD +P ++ + +G+ A G HTAAV +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD------- 179
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
GKL+ WG G G LG GD+ +++P V A+ + C VACG T+A++ SG
Sbjct: 180 -----GGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ AD LP++V L++ + +++ G H LT ++Y WG
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQVA-ALAEFNITQVSGGWRHTVALTEAGKLYGWGWN 293
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQ-VKSIACGTNFTAAI 418
G++G GD DD SP L+ Q V ++CG T A+
Sbjct: 294 KFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 149/304 (49%), Gaps = 28/304 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
++ WG G R+G G D +P +++ L+++ IACG H V
Sbjct: 79 IYSWGWGD--------FGRLG--HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTAD 128
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV+SWG G+LG G D L P + A ++++++A G HT AVT G LY WG
Sbjct: 129 GEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGW 188
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ +P V P G + ++CG HT V+ +G+L+T+G +G
Sbjct: 189 GRY--GNLGLGDRGDRMLPAEV--PAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYG 244
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD +P +V +L + + G HT A+ E +GKL+ WG
Sbjct: 245 QLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTE------------AGKLYGWGW 292
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G++G GD + P ++ + +V+CG TVA+T +VY+ G GQLG
Sbjct: 293 NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLG 352
Query: 333 NPQA 336
+ A
Sbjct: 353 HGDA 356
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 43 GDGVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG 101
G + G G R G+ G + D LP + + + +ACG RH V++ G+++++G
Sbjct: 180 GGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYG 239
Query: 102 EESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN-FG 160
G+LGHG +D L P + AL+ NI V+ G HT A+T +G LY WG +N FG
Sbjct: 240 WSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWG---WNKFG 296
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
+G G+ H P+ ++ P + V +SCG HT VT ++++G GT G LGHGD
Sbjct: 297 QVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDA 356
Query: 221 KSVSIPREVESL 232
S P+ +++L
Sbjct: 357 VDRSAPKGIQAL 368
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
V ++CG RH V + V+SWG + G+LGHG D PK I ALS
Sbjct: 321 VVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQALS 369
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Felis catus]
Length = 4861
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4357
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4278
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4279 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 151/308 (49%), Gaps = 38/308 (12%)
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T V+ + ++Y WG + + L G + PK + +I G + T V++
Sbjct: 365 TPIVSETCEVYVWGSNSSH--QLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVM 254
+ G + G G++G LG GD + S +++ S+K + + + + G HT A
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 474
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVA 313
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A
Sbjct: 475 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TE 371
+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS H L+
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRT 582
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
V+++G G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+ ++ W G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 428 DQSMCSGC 435
C GC
Sbjct: 643 ----CLGC 646
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVVEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3997 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4043
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSVVWA 4209
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4268 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4327
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4328 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4356
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3997 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4054 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4111 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4158
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV-YTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V + G YG+L
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKL 4218
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4219 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4277
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4278 HNRPQQIPVLAGVIIEDVAVGAEHTLAL 4305
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSV-VW 4208
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4268 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4315
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4316 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 4007 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4053
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4114 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4219
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4277
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4278 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4337
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4338 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4366
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 4007 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4063
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4064 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4121 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4168
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4228
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4229 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4287
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4288 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4110 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4160 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4218
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4219 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4277
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4278 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4325
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4326 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4368
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVVEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
Length = 4798
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3935 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 3981
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4041
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4042 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4098
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4099 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4147
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4148 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4205
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4206 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4265
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4266 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4294
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3935 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3991
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 3992 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4048
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4049 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4096
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4097 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKL 4156
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4157 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4216
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4217 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4243
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4038 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4087
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV++ G + W
Sbjct: 4088 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM-VW 4146
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4147 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4205
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4206 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4253
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4254 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4296
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 571
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 632 TGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3996 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4042
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4327 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4355
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4053 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4157
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4276
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4277 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4207
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4315 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4357
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4357
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4278
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4279 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4359
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 571
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 631
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 632 TGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVVEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3991 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4037
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4098 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4203
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4261
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4321
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4322 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4350
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3991 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4047
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4048 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4105 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4152
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKL 4212
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4213 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4273 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4299
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4094 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV++ G + W
Sbjct: 4144 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM-VW 4202
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4203 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4261
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4309
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4310 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4352
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3965 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4011
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4012 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4071
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4072 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4128
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4129 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4177
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4178 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4235
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4236 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4295
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4296 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4324
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3965 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4021
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4022 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4078
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4079 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4126
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4127 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4186
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4187 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4245
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4246 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4273
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4068 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4117
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4118 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4176
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4177 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4235
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4236 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------SNGDVYAWG 4283
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4284 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4326
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNIRQISAGRCHSAA 4357
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4280 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4306
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3997 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4043
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4209
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4327
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4328 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4356
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3997 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4054 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4111 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4158
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4218
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4219 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4277
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ +A G T A+
Sbjct: 4278 HNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4208
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT A+ S+G ++ WG
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALA------------SNGDVYAWG 4315
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4316 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4358
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV++ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3996 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 4042
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4053 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4157
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4276
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4277 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4207
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4315 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S + S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H +++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLSLSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNIRQISAGRCHSAA 4357
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4280 NRPQQIPVLAGMIIEDVAVGAEHTLAL 4306
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWT 4359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3996 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 4042
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4053 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4157
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4276
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4277 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4207
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4315 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S + S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H +++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLSLSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3927 DVYLWGAGRHGQLAEAGRN-------VMIPAAAPSFSQA------QQVICGQNCTFVIQA 3973
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 3974 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4033
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4034 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4090
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4091 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4139
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4140 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4197
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E+IA G+ H L S +VY WG + G+LG G T
Sbjct: 4198 IGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4257
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ L+ K ++ I+ G +AA
Sbjct: 4258 NHVREPTLITILQGKNIRQISAGRCHSAA 4286
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3927 DVYLWGAGRHGQLAEA-GRNVMIPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3983
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 3984 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4040
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G ++ +CG H+A V S GKLFT+G
Sbjct: 4041 GKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT------------SDGKLFTFG 4088
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4089 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4148
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4149 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4207
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ IA G T A+
Sbjct: 4208 HNRPQQIPVLAGVVIEDIAVGAEHTLAL 4235
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 24/285 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4030 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVIQMSCGFKHSAVVT 4079
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4080 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4138
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4139 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4197
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4198 IGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALA------------STGDVYAWG 4245
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+G+LG G PT + L N +++ G + A T S
Sbjct: 4246 SNSEGQLGLGHTNHVREPTLITILQGKNIRQISAGRCHSAAWTAS 4290
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 145/304 (47%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
+++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ----------SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 2644 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 2690
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 2691 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2750
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 2751 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2807
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 2808 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 2856
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 2857 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 2914
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 2915 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 2974
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 2975 NHVREPTLVTVLQGKNIRQISAGRCHSAA 3003
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 2644 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 2700
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 2701 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2757
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 2758 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 2805
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 2806 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 2865
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 2866 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 2924
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 2925 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 2952
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 2747 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 2796
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 2797 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 2855
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 2856 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 2914
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 2915 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL------------ASTGDVYAWG 2962
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 2963 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 3005
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3996 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 4042
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4053 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4157
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4276
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4277 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4207
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4315 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S + S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H +++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLSLSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3998 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4044
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4105 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4210
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4328
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4329 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4357
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 188/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ KM S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKMALSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G L EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 171/336 (50%), Gaps = 25/336 (7%)
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
A +V++ EV+ WG S +L G +L PK+ ALS + + + G+Y T ++ G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTDG 422
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGI-HVSSISCGPWHTAVVTSAGQLF 205
+ G G+Y G LG G+ + K++ P I VSS HT T+ G++F
Sbjct: 423 SVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
++GDG +G LGHG+ + P+ ++ L+G V + G H+AAV E
Sbjct: 481 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------ 528
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTM 323
G+L+TWG+GD GRLGHGD ++ +PT V + N V+CG S T+AL+ G V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWSF 586
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ + +V L F+ ++ GS LTS +VY WG GA L
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--L 644
Query: 384 GHGDTDDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
G G ++ P L+E L ++ I+ G + A+
Sbjct: 645 GCGSSEATALRPKLIEELAATRIVDISIGDSXCLAL 680
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3998 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4055 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4112 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4159
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4219
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4220 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4278
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4279 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4101 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4151 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4209
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4210 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4268
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4316
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4317 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4359
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 150/305 (49%), Gaps = 38/305 (12%)
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
V+ + ++Y WG + + L G + PK L +I G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNSSH--QLVEGTQEKILQPKMA---LSFSDAQTIEAGQYCTFVISTDG 422
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G G++G LG GD + S +++ S+K + + + + G HT A
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT------ 474
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTT 316
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A+T
Sbjct: 475 ------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 317 SGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYT 374
G +YT G +G+LG+ ++ + +P V+ S V E++CGS H L+ V++
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWS 585
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQS 430
+G G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+ ++ W G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA--- 642
Query: 431 MCSGC 435
C GC
Sbjct: 643 -CLGC 646
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 147/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVVEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ A+ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSXCLALRHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 2451 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 2497
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 2498 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2557
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 2558 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2614
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 2615 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 2663
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 2664 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 2721
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 2722 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 2781
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 2782 NHVREPTLVTGLQGKNVRQISAGRCHSAA 2810
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 2451 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 2507
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 2508 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2564
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 2565 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 2612
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 2613 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 2672
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 2673 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2732
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 2733 NRPQQIPVLAGMIIEDVAVGAEHTLAL 2759
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 2554 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 2603
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 2604 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 2662
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 2663 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 2721
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 2722 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALA------------SNGDVYAWG 2769
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 2770 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 2812
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1-like [Equus caballus]
Length = 4860
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3997 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4043
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------STDGSMVWA 4209
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4268 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4327
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4328 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4356
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P VE +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLVE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3997 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4054 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4111 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4158
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++T G V+ G YG+L
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKL 4218
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4219 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4277
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4278 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4305
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSM-VW 4208
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4268 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------SNGDVYAWG 4315
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4316 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ VE L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKL++ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLVEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 4007 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 4053
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4114 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4219
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4277
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4278 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4337
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4338 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4366
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 4007 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4063
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4064 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4121 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4168
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4228
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4229 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4287
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4288 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4110 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4160 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4218
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4219 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4277
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4278 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4325
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4326 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4368
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S + S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H +++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLSLSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Pongo abelii]
Length = 4864
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 4001 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4047
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4108 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4164
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4213
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4271
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4272 IGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4331
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4332 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4360
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 4001 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4057
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4058 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4115 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4162
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4222
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4223 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4283 NRPQQIPLLAGVIIEDVAVGAEHTLAL 4309
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4104 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4154 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4212
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4213 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4271
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4272 IGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4319
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4320 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4362
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3996 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 4042
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4103 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4208
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3996 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4052
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4053 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4110 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4157
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4217
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4218 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4276
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4277 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4099 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4149 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4207
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4208 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4315 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4357
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 571
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 632 TGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S + S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H +++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLSLSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 4002 DVYLWGAGRHGQLAEAGRN-------VMIPAAAPSFSQA------QQVICGQNCTFVIQA 4048
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4049 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4108
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4109 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4165
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4166 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4214
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4215 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4272
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4273 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4332
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ L+ K ++ I+ G +AA
Sbjct: 4333 NHVREPTLITVLQGKNIRQISAGRCHSAA 4361
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A V+ G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 4002 DVYLWGAGRHGQLAEA-GRNVMIPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4058
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4059 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4115
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G ++ +CG H+A V S GKLFT+G
Sbjct: 4116 GKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT------------SDGKLFTFG 4163
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4164 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4223
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4224 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4282
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4283 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4310
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 143/305 (46%), Gaps = 25/305 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4105 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVIQMSCGFKHSAVVT 4154
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4155 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4213
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4214 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4272
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4273 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4320
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+G+LG G PT + L N +++ G + A T S G V QL
Sbjct: 4321 SNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTASPVPPRAPGVSVPLQL 4380
Query: 332 GNPQA 336
G P A
Sbjct: 4381 GLPDA 4385
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A++ G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V++ GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
+++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ----------SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
Length = 4860
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3997 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4043
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4209
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4327
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4328 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4356
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3997 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4054 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4111 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4158
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4218
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4219 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4277
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ +A G T A+
Sbjct: 4278 HNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4150 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4208
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4209 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4267
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT A+ S+G ++ WG
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4315
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4316 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4358
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 178/330 (53%), Gaps = 22/330 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS-GDLYTWGDG 155
V++WG G LGHG D D+ P++++AL NI+ +ACG + A+ G +Y+WG G
Sbjct: 1 VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA---GQLFTFGDGTF 212
Y G+LG GN S + P ++ + +V ISC H A VTS G +++FGD +
Sbjct: 61 KY--GILGQGNLRSRFAPLKI-ASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG GD + + P+ V L ++ ACG +H+AA+ + G LF WG
Sbjct: 118 SQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAAL------------SAKGNLFLWG 165
Query: 273 DGDKGRLGHGDKEAKLVPTCV-AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GD G+LG G+ PT + + VACG T LT G VY GS +YGQ+
Sbjct: 166 LGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQI 225
Query: 332 GNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
P + LP R+ SK FV ++CGS+H A +T ++Y WG +GRLG GD
Sbjct: 226 AAPSMNKFHLPYRISFNTSKRFVS-VSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQ 284
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAICL 420
R+SP+ VE +DK++ IACG+ TAA+ +
Sbjct: 285 RSSPTEVEGFRDKKIGRIACGSKHTAALII 314
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G G+LG G R S F P + S +V +I+C HAA V
Sbjct: 52 GKVYSWGLGK-YGILGQGNLR--SRFA-------PLKIASFKSSNVIDISCHELHAAAVT 101
Query: 93 ---KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
G V+S+G+ S +LG G P+L+ L++ NI VACG+YH+ A++ G+L
Sbjct: 102 SVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNL 161
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG G + G LG GN P ++ + V ++CG HT ++T G ++ FG
Sbjct: 162 FLWGLG--DDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGS 219
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G + +P + R V +CG +H+AA+ E +GKL+
Sbjct: 220 NIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITE------------NGKLY 267
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
WG GRLG GD + + PT V + R+ACG T AL
Sbjct: 268 AWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 32/338 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G +G LG G + +D P+ +E+ + +++ +ACG +N +
Sbjct: 1 VYTWGSGI-NGALGHGED---------IDIPSPRVVEALLAYNIKRLACGLHTVFALNAE 50
Query: 95 -GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL---SGDLY 150
G+V+SWG G LG G P I + + N+ ++C E H AVT +G +Y
Sbjct: 51 DGKVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVY 110
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
++GD + + LG G+ + P+ V L ++ ++CG +H+A +++ G LF +G G
Sbjct: 111 SFGDNSNS--QLGVGDTEPYAEPQLVT-VLNDENIIKVACGKYHSAALSAKGNLFLWGLG 167
Query: 211 TFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG G+ + P + K + + ACG HT + VG G ++
Sbjct: 168 DDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILT---VG---------GLVY 215
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
+G G++ +P ++ F V+CG + A+T +G +Y G G
Sbjct: 216 AFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDG 275
Query: 330 QLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVL 366
+LG + P VEG K + IACGS H A L
Sbjct: 276 RLGLGDCKQRSSPTEVEGFRDKK-IGRIACGSKHTAAL 312
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+++CG H+A + + G++++WG E+ GRLG G P ++ + I +ACG H
Sbjct: 249 SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKH 308
Query: 140 TCAVTL 145
T A+ +
Sbjct: 309 TAALII 314
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 1609 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 1655
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 1656 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1715
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 1716 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1772
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 1773 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 1821
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 1822 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 1879
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 1880 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 1939
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 1940 NHVREPTLVTVLQGKNVRQISAGRCHSAA 1968
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 1609 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 1665
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 1666 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1722
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 1723 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 1770
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 1771 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 1830
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 1831 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 1889
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 1890 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 1917
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 25/305 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 1712 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 1761
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 1762 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 1820
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 1821 AFGDGDYGKLGLGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 1879
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 1880 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 1927
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+G+LG G PT V L N +++ G + A T G V QL
Sbjct: 1928 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPVPPRAPGVSVPLQL 1987
Query: 332 GNPQA 336
G P A
Sbjct: 1988 GLPDA 1992
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 194/366 (53%), Gaps = 28/366 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK-QGE 96
WG G DG LG G D P L + LD+ +I CG H ++ + E
Sbjct: 42 WGRGE-DGQLG---------HGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRME 91
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG GRLGHG SD+ P+ I AL ++ I +ACG+ H AVT+ G++ +WG
Sbjct: 92 VYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWG--R 149
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ +G+ + ++ G HTA VT G+L+ +G G +G LG
Sbjct: 150 NQNGQLGLGTTEDSLVPQKIQ-AFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLG 208
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR +P +V + G + + ACG HT +V SSG L+T+G
Sbjct: 209 LGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISV------------SSSGGLYTYGWSKY 256
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHGD E L P V AL + ++ G T+ALT+ G++Y G +GQ+G
Sbjct: 257 GQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDN 316
Query: 336 ADGKLPNRVEGKLSKSF-VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D P +V+ ++ + +I+CG H +T + V++WG+G NG+LGHG++ DRN P
Sbjct: 317 IDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLP 376
Query: 395 SLVEAL 400
++E L
Sbjct: 377 KIIEVL 382
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 177/351 (50%), Gaps = 20/351 (5%)
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
S + V I+ G H+ + V SWG G+LGHG D P + L ++I
Sbjct: 14 SGPIRQVILISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDII 73
Query: 132 LVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
+ CG HT + + S ++Y+WG G +FG LGHGN + P+ + L + + I+C
Sbjct: 74 SITCGADHTTSYSESRMEVYSWGWG--DFGRLGHGNSSDLFTPQPIK-ALHSLKIRQIAC 130
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H VT G++ ++G G LG G + +P+++++ +G+ A G HTAAV
Sbjct: 131 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAV 190
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G+L+ WG G G LG GD+ +LVP V+ + VACG
Sbjct: 191 TE------------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRH 238
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
T+++++SG +YT G YGQLG+ + L P++VE L S++ I+ G H LTS
Sbjct: 239 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVE-ALRDSYISMISGGWRHTMALTSD 297
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK--QVKSIACGTNFTAAI 418
+Y WG G++G GD D SP V+ ++ + I+CG T AI
Sbjct: 298 GNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAI 348
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 157/315 (49%), Gaps = 28/315 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V+ WG G R+G G D P+ +++ L ++ IACG H V
Sbjct: 91 EVYSWGWGD--------FGRLG--HGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTM 140
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
GEV SWG G+LG G D L P+ I A ++I++VA G HT AVT G+LY WG
Sbjct: 141 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWG 200
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ VP++V+ + G + ++CG HT V+S+G L+T+G +G
Sbjct: 201 WGRY--GNLGLGDRNDRLVPEKVS-LVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYG 257
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD + P +VE+L+ + G HT A+ S G L+ WG
Sbjct: 258 QLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMALT------------SDGNLYGWGW 305
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G++G GD P V E + +++CG T+A+T +V++ G GQL
Sbjct: 306 NKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQL 365
Query: 332 GNPQA-DGKLPNRVE 345
G+ ++ D LP +E
Sbjct: 366 GHGESMDRNLPKIIE 380
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
++ G S +VAL + V + G GQLG+ A+ + L + I CG+ H
Sbjct: 23 ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHT 82
Query: 364 AVLT-SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ S+ EVY+WG G GRLGHG++ D +P ++AL +++ IACG + A+ +
Sbjct: 83 TSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTM 140
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKAL----ESAVVLDVQNIACGGRHAALVNKQG 95
T DG L G G N+ G G +D P + E A L VQ I+CG RH + ++
Sbjct: 295 TSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSL-VQ-ISCGWRHTLAITERQ 352
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
VFSWG + G+LGHG D PK+I+ LS
Sbjct: 353 NVFSWGRGTNGQLGHGESMDRNLPKIIEVLS 383
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 1578 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 1624
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 1625 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1684
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 1685 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1741
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 1742 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 1790
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 1791 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 1848
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 1849 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 1908
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 1909 NHVREPTLVTGLQGKNVRQISAGRCHSAA 1937
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 1578 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 1634
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 1635 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1691
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 1692 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 1739
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 1740 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 1799
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 1800 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1859
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 1860 NRPQQIPVLAGVIIEDVAVGAEHTLAL 1886
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 1681 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 1730
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 1731 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 1789
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 1790 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 1848
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 1849 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 1896
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 1897 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 1939
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3983 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4029
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4090 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSVVWA 4195
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4253
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4254 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4313
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4314 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4342
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G +++LT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3983 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4039
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4040 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4097 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4144
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV-YTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V + G YG+L
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKL 4204
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4205 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4263
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4264 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4291
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4086 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4136 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSV-VW 4194
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4195 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4253
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4254 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4301
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4302 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4344
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3990 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4036
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4097 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSVVWA 4202
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4260
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4261 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4320
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 4321 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4349
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G +++LT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3990 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4046
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4047 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4104 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4151
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV-YTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V + G YG+L
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKL 4211
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4212 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4270
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4271 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 4298
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4093 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4143 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSV-VW 4201
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4202 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4260
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4261 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 4308
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4309 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 4351
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3639 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 3685
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3745
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 3746 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3802
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 3803 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 3851
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 3852 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 3909
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 3910 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 3969
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P++V L+ K V+ I+ G +AA
Sbjct: 3970 NHVREPTVVTGLQGKNVRQISAGRCHSAA 3998
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 163/327 (49%), Gaps = 22/327 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3639 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3695
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 3696 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3752
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 3753 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 3800
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 3801 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 3860
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 3861 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3920
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 3921 NRPQQIPVLAGVIIEDVAVGAEHTLAL 3947
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 3742 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 3791
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 3792 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 3850
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 3851 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3909
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 3910 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 3957
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 3958 SNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWT 4000
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 201/389 (51%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG G + G N + + Q + CG ++
Sbjct: 3983 DVFLWGAGRHGQLAEAGRNILVPTLAPSFSQA-------------QQVVCGQNCTFVIQA 4029
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE--LVACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + + +CG + H+ A+T SG+++
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVF 4089
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LF+FG+G
Sbjct: 4090 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFSFGNG 4146
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4147 DYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAV-----------SADGMTVWA 4195
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT G+VYT G
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRL-- 4253
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ F+E++A G+ H L+S +VY WG + G+LG G T
Sbjct: 4254 IGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHT 4313
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ AL+ K ++ I+ G +AA
Sbjct: 4314 NHVREPTLISALQGKNIQQISAGRCHSAA 4342
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 189/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 368 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVISS 415
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + I+ V+ + HT A T G+++
Sbjct: 416 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVF 475
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A V+ G+L+T+G+G
Sbjct: 476 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 533
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 534 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 580
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 640
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + V +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 641 CGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 699
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 700 PITKPKKVIGLDGVAIQQISAGTSHSLA 727
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 168/328 (51%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG G+L ++L P L + S + V CG+ T + +G + G+G
Sbjct: 3983 DVFLWGAGRHGQLAEA-GRNILVPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEG 4039
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4040 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLF++G
Sbjct: 4097 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFSFG 4144
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQL 331
+GD GRLG G+ K +P V+AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKL 4204
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4205 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARN 4263
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V AL ++ +A G T +
Sbjct: 4264 HNRPQQVPALTGVFIEDVAVGAEHTLTL 4291
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 144/303 (47%), Gaps = 25/303 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4086 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++FS+G GRLG G S+ P+ + AL + VACG HT AV+ G + W
Sbjct: 4136 SDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADG-MTVW 4194
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4195 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRL 4253
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V +L G+ A G HT + S+G ++ WG
Sbjct: 4254 IGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTL------------SSTGDVYAWG 4301
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+G+LG G PT ++AL N +++ G + A T GS V QL
Sbjct: 4302 SNSEGQLGLGHTNHVREPTLISALQGKNIQQISAGRCHSAAWTAPPVPPRAPGSSVPLQL 4361
Query: 332 GNP 334
G P
Sbjct: 4362 GLP 4364
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V++S G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 402 TIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGS 461
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A S G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 462 DGHTLAFT------------SEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 509
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A++ G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 510 CVSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 566
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+
Sbjct: 567 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTS 626
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 627 TGQVYAWGCGA----CLGC 641
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 456 SSSKGS---DGHTLAFTSEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 506
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V++ GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 507 VVVCV---SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 561
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 562 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 619
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 620 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL-- 675
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V L +++ G S +
Sbjct: 676 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHS 725
Query: 312 VALT 315
+A T
Sbjct: 726 LAWT 729
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 204/408 (50%), Gaps = 29/408 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H G+V WG G DG LG G D +P L +
Sbjct: 19 SAGASHSVALLTGNVLCSWGRGE-DGQLG---------HGDAEDRLVPTVLSGFDAPAIT 68
Query: 80 NIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H A + +V+SWG GRLGHG SDV P+ + AL + I+ +ACG+
Sbjct: 69 SVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDS 128
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT++G++ +WG G LG G +P+++ E + V I+ G HTA V
Sbjct: 129 HCLAVTMAGEVQSWG--RNQNGQLGLGTTEDSLLPQKIQA-FESVCVKMIAAGAEHTAAV 185
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P +V S++G + V ACG HT V +
Sbjct: 186 TEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSD------ 239
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E LVP V AL + +++ G T+ALT+ G
Sbjct: 240 ------SGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEG 293
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + + ++ACG H L+ K V++WG+
Sbjct: 294 KLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQK-ISQVACGWRHTLALSEKKNVFSWGR 352
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
G +G+LG+G+ DRN+P L++AL ++ A WVS
Sbjct: 353 GTSGQLGNGEIVDRNTPVLIDALSSDGSACKKLESSTAAPFAAKVWVS 400
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 187/365 (51%), Gaps = 24/365 (6%)
Query: 62 MDSSL--PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
MDS + P + VVL ++ G H+ + + SWG G+LGHG D L P
Sbjct: 1 MDSVMAAPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVP 56
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
++ I V CG HT A + +Y+WG G +FG LGHGN + P+ V
Sbjct: 57 TVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWG--DFGRLGHGNSSDVFTPQPVKA 114
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
L+G+ + I+CG H VT AG++ ++G G LG G + +P+++++ + +
Sbjct: 115 -LQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
A G HTAAV E G L+ WG G G LG GD+ +L+P V+++
Sbjct: 174 MIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIA 357
VACG T+ ++ SG++YT G YGQLG+ D +P++VE L S + +I+
Sbjct: 222 EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQIS 280
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H LTS+ ++Y WG G++G G+ DD +SP V +D+++ +ACG T A
Sbjct: 281 GGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLA 340
Query: 418 ICLHK 422
+ K
Sbjct: 341 LSEKK 345
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + + P ++ Q + CG ++
Sbjct: 4003 DVYLWGAGRHGQLAEAGRN-------VMIPAGAPSFSQA------QQVICGQNCTFVIQA 4049
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4050 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4109
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G++FTFG+G
Sbjct: 4110 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKMFTFGNG 4166
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4167 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------STDGSMVWA 4215
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 4216 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4273
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H +TS +VY WG + G+LG G T
Sbjct: 4274 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHT 4333
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ L+ K ++ I+ G +AA
Sbjct: 4334 NHVREPTLITVLQGKNIRQISAGRCHSAA 4362
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P VE +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLVE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P A S + V CG+ T + +G + G+G
Sbjct: 4003 DVYLWGAGRHGQLAEA-GRNVMIPA--GAPSFSQAQQVICGQNCTFVIQANGTVLACGEG 4059
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4060 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4116
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GK+FT+G
Sbjct: 4117 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKMFTFG 4164
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++T G V+ G YG+L
Sbjct: 4165 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKL 4224
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4225 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 4283
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ +A G T AI
Sbjct: 4284 HNRPQQVPVLAGVVIEDVAVGAEHTLAI 4311
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4106 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4155
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4156 ADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSM-VW 4214
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 4215 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4273
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT A+ S+G ++ WG
Sbjct: 4274 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAIT------------STGDVYAWG 4321
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT + L N +++ G + A T
Sbjct: 4322 SNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWT 4364
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 38/308 (12%)
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T V+ + ++Y WG + + L G + PK + +I G + T V++
Sbjct: 365 TPIVSETCEVYVWGSNSSH--QLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 419
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVM 254
+ G + G G++G LG GD + S +++ S+K + + + + G HT A
Sbjct: 420 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 474
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVA 313
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A
Sbjct: 475 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 525
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TE 371
+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS H L+
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRT 582
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ ++ W G
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 428 DQSMCSGC 435
C GC
Sbjct: 643 ----CLGC 646
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ VE L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKL++ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLVEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+G+ + IS
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGVAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 34/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 153 DVYLWGAGRHGQLAEAGRN-------VMVPATAPSFSQA------QQVICGQNCTFVIQA 199
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 200 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 259
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 260 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 316
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 317 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 365
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 366 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 423
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 424 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 483
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K ++ I+ G +AA
Sbjct: 484 NHVREPTLVTVLQGKNIRQISAGRCHSAA 512
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 166/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 153 DVYLWGAGRHGQLAEA-GRNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 209
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 210 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 267 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 315 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 374
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 375 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 433
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 434 HNRPQQIPVLAGVVIEDVAVGAEHTLAL 461
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 24/283 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 256 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 305
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 306 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 364
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 365 AFGDGDYGKLGLGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 423
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 424 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL------------ASTGDVYAWG 471
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 472 SNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 514
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 194/369 (52%), Gaps = 35/369 (9%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA----CGGRHA-ALVN 92
WG G DG LG G D +P L DV IA CG H A +
Sbjct: 44 WGRGE-DGQLG---------HGDAEDRPVPTLLSG---FDVPGIASVVICGADHTTAYSD 90
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+Q +++SWG GRLGHG SDV HP+ I+AL + I+ +ACG+ H AVT +G +++W
Sbjct: 91 EQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSW 150
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G LG GN +P++++ EG+ V I+ G HTA + G L+ +G G +
Sbjct: 151 G--RNQNGQLGLGNTEDSLLPQKIHA-FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQY 207
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG GDR +P +V S++G + V ACG HT V SSG L+T+G
Sbjct: 208 GNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV------------SSSGDLYTYG 255
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LGHGD E LVP + AL + ++A G T+A+ G +Y G +GQ+G
Sbjct: 256 WSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVG 315
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
D P +V + V ++ACG H LT V++WG+G +G+LGHG+ DR
Sbjct: 316 VADNVDHCSPVQVIFP-DEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDR 374
Query: 392 NSPSLVEAL 400
N+P +++AL
Sbjct: 375 NTPKMIDAL 383
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 182/363 (50%), Gaps = 23/363 (6%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D +P+A E V L ++ G H+ + V SWG G+LGHG D P L+
Sbjct: 11 DEEVPEAPEQTVAL----VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLL 66
Query: 123 DALSNMNI-ELVACGEYHTCAVT-LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
I +V CG HT A + LY+WG G +FG LGHGN + P+ + L
Sbjct: 67 SGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWG--DFGRLGHGNSSDVFHPQPIEA-L 123
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+GI + I+CG H VT AGQ+ ++G G LG G+ + +P+++ + +G+
Sbjct: 124 QGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMI 183
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
A G HTAA++E G L+ WG G G LG GD+ +LVP V+++
Sbjct: 184 AAGAEHTAAILE------------DGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACG 359
VACG TV +++SG +YT G YGQLG+ D +P+++E L F+ +IA G
Sbjct: 232 MVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDRFISQIAGG 290
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
H + ++Y WG G++G D D SP V +++V +ACG T A+
Sbjct: 291 WRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALT 350
Query: 420 LHK 422
+K
Sbjct: 351 ENK 353
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
GDG L G G N+ G +D P + V +ACG RH + + VFS
Sbjct: 298 AGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTENKNVFS 357
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D PK+IDALS
Sbjct: 358 WGRGTSGQLGHGEIIDRNTPKMIDALS 384
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 193/365 (52%), Gaps = 28/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ-GE 96
WG G DG LG G D P L + +V ++ CG H ++ +
Sbjct: 40 WGRGE-DGQLG---------HGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQ 89
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG GRLGHG SD+ P+ I AL + I+ +ACG+ H AVT+ G++ +WG
Sbjct: 90 VYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRN- 148
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ +G+ V ++ G HTA VT G+L+ +G G +G LG
Sbjct: 149 -QNGQLGLGTTEDSLVPQKIQ-AFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLG 206
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR +P +V +++G++ V+ ACG HT +V SSG L+T+G
Sbjct: 207 LGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISV------------SSSGGLYTYGWSKY 254
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHGD E L P + AL E ++ G T+ALT+ G +Y G +GQ+G
Sbjct: 255 GQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDN 314
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P +V+ + V I+CG H +T + V++WG+G NG+LGHG++ DRN P
Sbjct: 315 VDHCSPVQVKFPHEQKVVH-ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPK 373
Query: 396 LVEAL 400
++E L
Sbjct: 374 MIEVL 378
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 182/349 (52%), Gaps = 18/349 (5%)
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
SA V V I+ G H+ + V SWG G+LGHG D L P + AL +
Sbjct: 12 SAPVRRVLLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVV 71
Query: 132 LVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
V CG HT A + S +Y+WG G +FG LGHGN + P+ + L G+ + I+C
Sbjct: 72 SVTCGADHTTAYSESFTQVYSWGWG--DFGRLGHGNSSDLFTPQPIK-ALHGLRIKQIAC 128
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H VT G++ ++G G LG G + +P+++++ +G+ A G HTAAV
Sbjct: 129 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 188
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G+L+ WG G G LG GD+ +LVP V+ + +VACG
Sbjct: 189 TE------------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRH 236
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
T+++++SG +YT G YGQLG+ + L P+++E L ++ + EI+ G H LTS
Sbjct: 237 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLE-ALQENLISEISGGWRHTMALTSD 295
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++Y WG G++G GD D SP V+ +++V I+CG T A+
Sbjct: 296 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAV 344
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 159/317 (50%), Gaps = 26/317 (8%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
++ V+ WG G R+G G D P+ +++ L ++ IACG H
Sbjct: 85 ESFTQVYSWGWGD--------FGRLG--HGNSSDLFTPQPIKALHGLRIKQIACGDSHCL 134
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
V GEV SWG G+LG G D L P+ I A +++++VA G HT AVT G+L
Sbjct: 135 AVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGEL 194
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y WG G Y G LG G+ VP++V+ +EG+ + ++CG HT V+S+G L+T+G
Sbjct: 195 YGWGWGRY--GNLGLGDRNDRLVPEKVS-TVEGVKMVKVACGWRHTISVSSSGGLYTYGW 251
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LGHGD + P ++E+L+ + G HT A+ S GKL+
Sbjct: 252 SKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALT------------SDGKLY 299
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG G++G GD P V E ++CG T+A+T +V++ G G
Sbjct: 300 GWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNG 359
Query: 330 QLGNPQA-DGKLPNRVE 345
QLG+ ++ D +P +E
Sbjct: 360 QLGHGESIDRNIPKMIE 376
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
++ G S +VAL + V + G GQLG+ A+ +L L V + CG+ H
Sbjct: 21 ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80
Query: 364 AVLT-SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ S T+VY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 81 TAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHCLAVTM 138
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P ++ V +I+CG RH V ++ VFS
Sbjct: 293 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFS 352
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D PK+I+ LS
Sbjct: 353 WGRGTNGQLGHGESIDRNIPKMIEVLS 379
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC1 [Nomascus leucogenys]
Length = 4855
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 202/389 (51%), Gaps = 39/389 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3997 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4043
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN R P +G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4104 SWGDGDY--GKLGHGNS------DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4155
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V +L+G + + ACG+ HT AV + ++
Sbjct: 4156 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SADGSMVWA 4204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P + L +VACG +VALT GHVYT G
Sbjct: 4205 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4262
Query: 331 LGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 4263 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4322
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 4323 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4351
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 158/327 (48%), Gaps = 27/327 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3997 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4053
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4054 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ R+ +G V+ +CG H+A V S GKLFT+G
Sbjct: 4111 GKLGHGNSD-----RQRRPXQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL +VACG + T+A++ G V+ G YG+L
Sbjct: 4154 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKL 4213
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G + K + L ++++ACG+ LT VYT+G+ L G +
Sbjct: 4214 GLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4273
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
N P + L ++ +A G T A+
Sbjct: 4274 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4300
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 29/283 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P E V ++CG +H+A+V
Sbjct: 4100 GEVFSWGDGDYGKLGHGNSDR----------QRRPXQGEEVV-----QMSCGFKHSAVVT 4144
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL I VACG HT AV+ G + W
Sbjct: 4145 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSM-VW 4203
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++++ L GI + ++CG + +T G ++TFG
Sbjct: 4204 AFGDGDYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4262
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P+++ L G+ A G HT A+ S+G ++ WG
Sbjct: 4263 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALA------------SNGDVYAWG 4310
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 4311 SNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWT 4353
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 202/398 (50%), Gaps = 29/398 (7%)
Query: 6 MDAFRVSLSSAVSSSSQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDS 64
M A S V S G+ H G+V WG G DG LG G D
Sbjct: 5 MAAVPDSPPQTVVLVSAGASHSVALLTGNVLCSWGRGE-DGQLG---------HGDAEDR 54
Query: 65 SLPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
+P L + ++ CG H A + +V+SWG GRLGHG SDV P+ +
Sbjct: 55 LVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVK 114
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
AL + I+ +ACG+ H AVT++G + +WG G LG G +P+++ EG+
Sbjct: 115 ALQGLKIKQIACGDSHCLAVTMAGQVQSWG--RNQNGQLGLGTTEDSLLPQKIQA-FEGV 171
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
V I+ G HTA VT G L+ +G G +G LG GDR +P +V S++G + V ACG
Sbjct: 172 CVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACG 231
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT V + SG L+T+G G+LGHGD E LVP + AL + +
Sbjct: 232 WRHTITVSD------------SGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQ 279
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYH 362
++ G T+ALT+ G +Y G +GQ+G D P +V + + ++ACG H
Sbjct: 280 ISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQK-ISQVACGWRH 338
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
L+ K V++WG+G +G+LG+G+ DRN+P L++AL
Sbjct: 339 TLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 376
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 188/366 (51%), Gaps = 25/366 (6%)
Query: 62 MDS---SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
MDS ++P + VVL ++ G H+ + + SWG G+LGHG D L
Sbjct: 1 MDSVMAAVPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLV 56
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P ++ I V CG HT A + +Y+WG G +FG LGHGN + P+ V
Sbjct: 57 PTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWG--DFGRLGHGNSSDVFTPQPVK 114
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L+G+ + I+CG H VT AGQ+ ++G G LG G + +P+++++ +G+
Sbjct: 115 A-LQGLKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCV 173
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A G HTAAV E G L+ WG G G LG GD+ +L+P V+++
Sbjct: 174 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 221
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEI 356
VACG T+ ++ SG++YT G YGQLG+ D +P+++E L S + +I
Sbjct: 222 GEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTISQI 280
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
+ G H LTS+ ++Y WG G++G G+ DD SP V +D+++ +ACG T
Sbjct: 281 SGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTL 340
Query: 417 AICLHK 422
A+ K
Sbjct: 341 ALSEKK 346
>gi|28874838|emb|CAC84088.1| ZR4 protein [Medicago sativa]
Length = 300
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/134 (89%), Positives = 128/134 (95%), Gaps = 1/134 (0%)
Query: 521 KLDSRSRAQLTRFSSMESFKQSEGR-SKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFN 579
+LD+RSR QL RFSSMESFKQ E R SK+NKKLEFNSSRVSP+PNG SQWGALNISKSFN
Sbjct: 1 RLDTRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFN 60
Query: 580 PMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTN 639
P+FGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLT+PKIVVDDAK+TN
Sbjct: 61 PVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTN 120
Query: 640 DSLSQEVIKLRAQV 653
DSLSQEVIKLR+QV
Sbjct: 121 DSLSQEVIKLRSQV 134
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 200/384 (52%), Gaps = 23/384 (5%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L +A G + V G+V+
Sbjct: 3929 DGSG-AIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVY 3987
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
S G + GRLG G V+ P L++++ ++ I+ VA G H A++ G +Y+WG+G
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG- 4046
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN +S+ PK V L GI + I+CG H+A +TSAG L+T+G G +G LG
Sbjct: 4047 -DDGKLGHGNRLSYDRPKLVEDLL-GIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG 4104
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD P+ VE+L+ + + ACG + + C + +++WGDG
Sbjct: 4105 HGDSDDQLRPKVVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4152
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4153 DYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4212
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K + IA GS H + K EV+TWG G+LG G T
Sbjct: 4213 TDDHVRRPRKVAALQGKKII-SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQR 4271
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4272 PRLVHALQGKKITRVACGSAHTLA 4295
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 201/389 (51%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL GS + + S + L+ +IA G + +V+++
Sbjct: 2953 VYVWGLNDKDQL--GGLK--GSKIKIPVRSEVLSKLKPI------HIAGGSKTLFIVSQE 3002
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G D ++ PKLI LS I+ VA G H A+T G +++W
Sbjct: 3003 GKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 3062
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN + P+ + L+ + I+CG H+A + S G+L+T+G G +
Sbjct: 3063 GEG--EDGKLGHGNCTTLDKPRLIES-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3119
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ V++L G R V+ ACG + S + G ++TWG
Sbjct: 3120 GRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTM----------SLTADGCVYTWG 3169
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P V L +V CG ++ALT G V+T G Y +LG
Sbjct: 3170 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3229
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3230 HGNDHHVRKPTLVEGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVN 3288
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L D ++ ++CG++ + A L
Sbjct: 3289 RKPSLVHELDDTRMNRVSCGSSHSIAWIL 3317
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 155/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR + PK +E + +++ +IACGG H+A +
Sbjct: 4038 GHVYSWGEG-DDGKLGHG-NR--------LSYDRPKLVEDLLGIEIVDIACGGHHSAAIT 4087
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PK+++AL + + VACG + T VT +++
Sbjct: 4088 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4147
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4148 SWGDGDY--GKLGRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4204
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLF 269
+ LGHG V PR+V +L+G + + A G H A CS G++F
Sbjct: 4205 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGEVF 4251
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P V AL RVACG + T+A +T+
Sbjct: 4252 TWGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWSTA 4299
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 169/331 (51%), Gaps = 21/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+Q V+ WG +LG S + P + LS + +A G V+ G LY
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3008
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV---SSISCGPWHTAVVTSAGQLFTFGD 209
G+GT G LG G++ + PK + P +V ++ G H +T G++F++G+
Sbjct: 3009 GEGTN--GRLGLGDDYNMCEPKLI--PFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGE 3064
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGHG+ ++ PR +ESLK R ACG H+AA+ S+G+L+
Sbjct: 3065 GEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAI------------ASNGELY 3112
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHGD ++ P V AL +VACG + T++LT G VYT G
Sbjct: 3113 TWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGD 3172
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+G+LG +DG + +L+ V ++ CG+ LT EV+TWGKG RLGHG+
Sbjct: 3173 FGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3232
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P+LVE L+ K++ +A G A+
Sbjct: 3233 DHHVRKPTLVEGLRGKKIVHVAVGALHCLAV 3263
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 166/332 (50%), Gaps = 25/332 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG +G + + +P S V+ + GG+HA +
Sbjct: 3003 GKLYACGEGT-NGRLG-----LGDDYNMCEPKLIP--FLSQYVIKKVAVHSGGKHALALT 3054
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G+VFSWGE G+LGHG + + P+LI++L + I +ACG H+ A+ +G+LYTW
Sbjct: 3055 QDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTW 3114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T+ G ++T+GDG
Sbjct: 3115 GLGEY--GRLGHGDTATQMKPKLVQA-LSGQRVVQVACGSRDAQTMSLTADGCVYTWGDG 3171
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G P V+ L GL V+ CG + A+ + G+++T
Sbjct: 3172 DFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKY------------GEVWT 3219
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG+ PT V L VA G +A+T +G VY G +GQ
Sbjct: 3220 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GN + +L + + ++CGS H
Sbjct: 3280 QGNGTTIVNRKPSLVHELDDTRMNRVSCGSSH 3311
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 189/377 (50%), Gaps = 32/377 (8%)
Query: 59 GVKM-DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
GVK + S P ++ L ++++ C R +++ G V+ + +G S+
Sbjct: 447 GVKFGNGSSPFYCDAIAELGIKHLCCTERALLILSLSGNVYI--------MYYG--SETQ 496
Query: 118 HPKLIDALSNMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
+P+ + + S+ + ++A H A+T G +Y+WG+G + G LGHG+ +SH PK
Sbjct: 497 YPQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNG--DGGRLGHGDNISHDEPKL 554
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
+ LE ++ I+CG ++A ++++G+L+T+G G +G LGHG V++P V +LKG
Sbjct: 555 IETLLEK-NIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGH 613
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
V ACG S + C +SG +F+WGDGD G+LG G + P V
Sbjct: 614 MVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIV 661
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSF 352
L++ N RV CG + ALT G VYT G +LG+ + + P +E L
Sbjct: 662 DKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIES-LRDKK 720
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+++++ G H+ LT VY WG+ G++ + PSL L K V +A G
Sbjct: 721 IKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASGP 780
Query: 413 NFTAAICLHKWVSGVDQ 429
+ A C+ W G ++
Sbjct: 781 TQSFAWCMSAWSGGANR 797
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 176/337 (52%), Gaps = 41/337 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG G + G+G P DA++ + I+ + C E ++LSG++Y
Sbjct: 441 EVLAWG---GVKFGNGSS-----PFYCDAIAELGIKHLCCTERALLILSLSGNVY----- 487
Query: 156 TYNFGLLGHGNEVSHWVPKRV----NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
++ +G+E + P+R+ + P+ I +S S G H +T G ++++G+G
Sbjct: 488 -----IMYYGSETQY--PQRMHSFSDKPVTMI--ASHSDGK-HYLALTQDGCVYSWGNGD 537
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHGD S P+ +E+L + ACG ++AA+ +SG+L+TW
Sbjct: 538 GGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAAL------------SASGELYTW 585
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYG 329
G G+ GRLGHG + VPT V L VACG S T+ +T SG V++ G YG
Sbjct: 586 GRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYG 645
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
+LG +DG ++ KL V + CG A LT++ EVYTWGKG RLGHG+ +
Sbjct: 646 KLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEE 705
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P L+E+L+DK++K ++ G A+ ++V G
Sbjct: 706 HVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYG 742
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 119/223 (53%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + + +P ESL LR ++ A G AV
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVT--------- 3981
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK+++ G G GRLG G ++ +VPT + ++ +VA G +AL++ G
Sbjct: 3982 ---ADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
HVY+ G G+LG+ + P VE L V+ IACG +H A +TS +YTWGK
Sbjct: 4039 HVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVD-IACGGHHSAAITSAGWLYTWGK 4097
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD+DD+ P +VEAL+D +V +ACG+ +C+
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G ++ P L I ++ G VT+ G+
Sbjct: 3931 SGAIYGWGHN--HRGQLGGLEGAKIKLPAPCESLSALRPIQLAG---GEQTLFAVTADGK 3985
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+++ G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 3986 VYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAV--------------NSGGKHC 4031
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G +++WG+GD G+LGHG++ + P V L+ +ACG + A+T++G
Sbjct: 4032 LALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGW 4091
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGK 377
+YT G YG+LG+ +D +L +V L V ++ACGS L T V++WG
Sbjct: 4092 LYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4151
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4152 GDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4192
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 117/273 (42%), Gaps = 63/273 (23%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG G +C +D P+ +ES +++IACG H+A +
Sbjct: 3057 GKVFSWGEGE-DGKLGHG-----NC--TTLDK--PRLIESLKSKRIRDIACGSGHSAAIA 3106
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + + PKL+ ALS + VACG + T ++T G +Y
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVY 3166
Query: 151 TWGDGTY--------------------------------------------------NFG 160
TWGDG + ++
Sbjct: 3167 TWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYF 3226
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHGN+ P V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3227 RLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3285
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
P V L R R +CG H+ A + V
Sbjct: 3286 IVNRKPSLVHELDDTRMNRVSCGSSHSIAWILV 3318
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
+ IP E L L+ + A G T +V GKL+ G+G GRLG G
Sbjct: 2972 IKIPVRSEVLSKLKPIHIAGGS-KTLFIVS-----------QEGKLYACGEGTNGRLGLG 3019
Query: 283 DK----EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG 338
D E KL+P +++ H+L ALT G V++ G G+LG+
Sbjct: 3020 DDYNMCEPKLIPFLSQYVIKKVAVHSGGKHAL--ALTQDGKVFSWGEGEDGKLGHGNCTT 3077
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
R+ L + +IACGS H A + S E+YTWG G GRLGHGDT + P LV+
Sbjct: 3078 LDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQ 3137
Query: 399 ALKDKQVKSIACGT------NFTAAICLHKWVSG 426
AL ++V +ACG+ + TA C++ W G
Sbjct: 3138 ALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDG 3171
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSL 310
+V S+ + ++ WG DK +LG G K +K+ +P L + +A G
Sbjct: 2937 QVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSKLKPIHIAGGSKT 2995
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTS 368
++ G +Y G G+LG ++ LS+ ++++A G H LT
Sbjct: 2996 LFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQ 3055
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+V++WG+G +G+LGHG+ + P L+E+LK K+++ IACG+ +AAI L+ W
Sbjct: 3056 DGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTW 3114
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 214/425 (50%), Gaps = 26/425 (6%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L +A G + V G+++
Sbjct: 3991 DGSG-AIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIY 4049
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
S G + GRLG G V+ P L++++ ++ I+ VA G H A++ G +Y+WG+G
Sbjct: 4050 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG- 4108
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN+VS+ PK + L G+ + I+CG H+A +TSAG L+T+G G +G LG
Sbjct: 4109 -DDGKLGHGNKVSYDRPKLIEDLL-GVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG 4166
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD P+ VE+L+ + + ACG + + C + +++WGDG
Sbjct: 4167 HGDSDDQLRPKVVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4214
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4215 DYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4274
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K + IA GS H + K EV+TWG G+LG G T +
Sbjct: 4275 TDDHVRRPRKVAALQGKKII-SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHR 4333
Query: 394 PSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCG 453
P LV AL+ K++ +ACG+ T A K M + + ++ K ++
Sbjct: 4334 PRLVHALQGKKITRVACGSAHTLAWSTAK---ATQSRMPASTPMEYDLVKDLSYSVLRNR 4390
Query: 454 LVFCH 458
LV H
Sbjct: 4391 LVLLH 4395
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 204/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E+ L +IA G + +V+++
Sbjct: 3014 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSETLSKLKPIHIAGGSKTLFIVSQE 3063
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G D+++ PK I LS I+ VA G H A+T G +++W
Sbjct: 3064 GKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN +S PK + L+ + I+CG H+A + S G+L+T+G G +
Sbjct: 3124 GEG--EDGKLGHGNCISLDKPKLIE-VLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3180
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + + P+ V++L G R V+ ACG + + + G +++WG
Sbjct: 3181 GRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTM----------ALTTDGYVYSWG 3230
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P V L +V CG ++ALT G V+T G Y +LG
Sbjct: 3231 DGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3290
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3291 HGNDHHVRKPTLVEGLRGKKII-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVN 3349
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L+D +V ++CG++ + A L
Sbjct: 3350 RKPSLVHDLEDARVNRVSCGSSHSIAWVL 3378
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G K+ PK +E + +++ +IACGG H+A +
Sbjct: 4100 GHVYSWGEG-DDGKLG---------HGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT 4149
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PK+++AL + + VACG + T VT +++
Sbjct: 4150 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4209
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4210 SWGDGDY--GKLGRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4266
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLF 269
+ LGHG V PR+V +L+G + + A G H A CS G++F
Sbjct: 4267 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGEVF 4313
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P V AL RVACG + T+A +T+
Sbjct: 4314 TWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWSTA 4361
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 169/331 (51%), Gaps = 21/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+Q V+ WG +LG S + P + LS + +A G V+ G LY
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGD 209
G+GT G LG G++ + PK + P I ++ G H +T G++F++G+
Sbjct: 3070 GEGTN--GRLGLGDDNNMCEPKAI--PFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGE 3125
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGHG+ S+ P+ +E LK R ACG H+AA+ S+G+L+
Sbjct: 3126 GEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAI------------ASNGELY 3173
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHGD + P V AL+ +VACG + T+ALTT G+VY+ G
Sbjct: 3174 TWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGD 3233
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+G+LG +DG + +L+ V ++ CG+ LT EV+TWGKG RLGHG+
Sbjct: 3234 FGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3293
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P+LVE L+ K++ +A G A+
Sbjct: 3294 DHHVRKPTLVEGLRGKKIIHVAVGALHCLAV 3324
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 177/337 (52%), Gaps = 41/337 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG G + G+G P DA++ + I+ + C E ++L+G++Y
Sbjct: 500 EVLAWG---GVKFGNGST-----PFYCDAIAELGIKQLCCTERALMILSLNGNVYN---- 547
Query: 156 TYNFGLLGHGNEVSHWVPKRVNG----PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
+ HG+E + P+RV+G P+ I +S + G H +T G ++++G+G
Sbjct: 548 ------MYHGSETQY--PQRVHGFSDKPITMI--ASHADGK-HYLALTQDGCVYSWGNGD 596
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHGD S P+ +E+L + ACG ++AA+ ++G+L+TW
Sbjct: 597 GGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAAL------------SANGELYTW 644
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYG 329
G G+ GRLGHG+ + + PT V L VACG S T+ +T SG V++ G YG
Sbjct: 645 GRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYG 704
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
+LG DG ++ KL V ++ CGS A LT+ EVYTWGKG RLGHG +
Sbjct: 705 KLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEE 764
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P ++E+L+D++VK ++ GT A+ ++V G
Sbjct: 765 HVRYPKVIESLRDRKVKDLSVGTTHILALTEDQFVYG 801
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 163/334 (48%), Gaps = 29/334 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE--SAVVLDVQNIACGGRHAAL 90
G ++ GEGT +G LG G + PKA+ S V+ + GG+HA
Sbjct: 3064 GKLYACGEGT-NGRLG---------LGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALA 3113
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ + G+VFSWGE G+LGHG + PKLI+ L + I +ACG H+ A+ +G+LY
Sbjct: 3114 LTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELY 3173
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ ++ PK V L G V ++CG T +T+ G ++++G
Sbjct: 3174 TWGLGEY--GRLGHGDTITQTRPKLVQA-LIGHRVVQVACGSRDAQTMALTTDGYVYSWG 3230
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G P V+ L L ++ CG + A+ + G++
Sbjct: 3231 DGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKY------------GEV 3278
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG+ PT V L VA G +A+T +G VY G +
Sbjct: 3279 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3338
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GQ GN + L + V ++CGS H
Sbjct: 3339 GQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSH 3372
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 183/373 (49%), Gaps = 30/373 (8%)
Query: 59 GVKM-DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
GVK + S P ++ L ++ + C R +++ G V++ + HG S+
Sbjct: 506 GVKFGNGSTPFYCDAIAELGIKQLCCTERALMILSLNGNVYN--------MYHG--SETQ 555
Query: 118 HPKLIDALSNMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
+P+ + S+ I ++A H A+T G +Y+WG+G + G LGHG+ +S+ PK
Sbjct: 556 YPQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNG--DGGRLGHGDTISYDEPKL 613
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
+ LE ++ I+CG ++A +++ G+L+T+G G +G LGHG+ V P V +LKG
Sbjct: 614 IEALLEK-NIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGH 672
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
V ACG S + C +SG +F+WGDGD G+LG G + P V
Sbjct: 673 TVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIV 720
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
L++ N +V CG + ALT G VYT G +LG+ + +V L V
Sbjct: 721 DKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKV 780
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
++++ G+ H+ LT VY WG+ G++ + P+L L K V +A G
Sbjct: 781 KDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASGPT 840
Query: 414 FTAAICLHKWVSG 426
+ A C+ W G
Sbjct: 841 QSFAWCMSAWSGG 853
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 132/268 (49%), Gaps = 31/268 (11%)
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
++N GH ++ W+ +R W T +G ++ +G G L
Sbjct: 3963 SHNIFKQGHDEQLLQWLNRRPED--------------W-TLSWDGSGAIYGWGHNHRGQL 4007
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G + V +P ESL LR ++ A G AV + GK+++ G G
Sbjct: 4008 GGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT------------ADGKIYSTGYGA 4055
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGN 333
GRLG G ++ ++PT + ++ +VA G +AL++ GHVY+ G G+LG+
Sbjct: 4056 AGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ P +E L V+ IACG +H A +TS +YTWGKG GRLGHGD+DD+
Sbjct: 4116 GNKVSYDRPKLIEDLLGVEIVD-IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQL 4174
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAICL 420
P +VEAL+D +V +ACG+ +C+
Sbjct: 4175 RPKVVEALQDYKVIDVACGSGDAQTLCV 4202
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 23 GSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
GSGH A G+++ WG G R+G G + + PK +++ + V +
Sbjct: 3159 GSGHSAAIASNGELYTWGLGE--------YGRLG--HGDTITQTRPKLVQALIGHRVVQV 3208
Query: 82 ACGGRHAAL--VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
ACG R A + G V+SWG+ G+LG G P L+D L+N+ + V CG
Sbjct: 3209 ACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQF 3268
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+ A+T G+++TWG G Y LGHGN+ P V G L G + ++ G H VT
Sbjct: 3269 SLALTKYGEVWTWGKGDYFR--LGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVT 3325
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
GQ++ +GD G G+G P V L+ R R +CG H+ A V V
Sbjct: 3326 DTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLV 3379
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 204/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 3256 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSEVLSKLKPIHIAGGSKTLFVVSQE 3305
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G DS+V PKLI LS I+ VA G H A+T G +++W
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSW 3365
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN VS P+ + L+ + I+CG H+A +TS+G+L+T+G G +
Sbjct: 3366 GEG--EDGKLGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3422
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ V+SL G R ++ ACG + + + G +++WG
Sbjct: 3423 GRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTM----------ALTADGSVYSWG 3472
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P + L ++ CG ++ALT G V+T G Y +LG
Sbjct: 3473 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3532
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3533 HGNDHHVRKPTLVEGLRGKKVV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVN 3591
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L D +V ++CG++ + A L
Sbjct: 3592 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3620
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 198/384 (51%), Gaps = 23/384 (5%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L + G + V G+V+
Sbjct: 4256 DGSG-AIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVY 4314
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
+ G + GRLG G V+ P L++++ ++ ++ VA G H A++ G +Y+WG+G
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG- 4373
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN + + PK + L G + I+CG H+A +TSAG L+T+G G +G LG
Sbjct: 4374 -DDGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG 4431
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD + P+ VE+L+ + + ACG + + C + +++WGDG
Sbjct: 4432 HGDSEDQLTPKLVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4479
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + +P + +L +V CG +VALT SG +YT G Y +LG+
Sbjct: 4480 DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4539
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K + IA GS H T K EV+TWG G+LG G T
Sbjct: 4540 TDDHVRRPRKVAALQGKKII-SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQR 4598
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4599 PRLVHALQGKKITRVACGSAHTLA 4622
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 168/335 (50%), Gaps = 31/335 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G ++ GEGT +G LG G + PK + ++ +A GG+HA
Sbjct: 3306 GKLYACGEGT-NGRLG---------LGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALA 3355
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ + G++FSWGE G+LGHG + P+LI++L + I +ACG H+ A+T SG+LY
Sbjct: 3356 LTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3415
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ + PK V L G V ++CG T +T+ G ++++G
Sbjct: 3416 TWGLGEY--GRLGHGDTATQMKPKLVQS-LVGQRVIQVACGSRDAQTMALTADGSVYSWG 3472
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G P ++ L GL V+ CG + A+ + G++
Sbjct: 3473 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY------------GEV 3520
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG+ PT V L VA G +A+T +G VY G +
Sbjct: 3521 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDH 3580
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GQ GN K P+ V +L + V ++CGS H
Sbjct: 3581 GQQGNGSTIVNKKPSLVH-ELDDARVNRVSCGSSH 3614
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 151/286 (52%), Gaps = 27/286 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR + PK +E + ++ +IACGG H+A +
Sbjct: 4365 GHVYSWGEG-DDGKLGHG-NR--------LMYDRPKLIEELLGTEIVDIACGGHHSAAIT 4414
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PKL++AL + + VACG + T VT +++
Sbjct: 4415 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4474
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4475 SWGDGDY--GKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4531
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V +L+G + + A G H A + G++FT
Sbjct: 4532 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEVFT 4579
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
WGD D+G+LG G A P V AL RVACG + T+A +T
Sbjct: 4580 WGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4625
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 160/312 (51%), Gaps = 29/312 (9%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P DA++ + I+ + C E +++SG++Y ++ +G+E + P+RV G
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVY----------MMYYGSETQY--PQRVYG 491
Query: 179 PLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
E ++S S G H +T ++++G+G G LGHGDR P+ VE+L
Sbjct: 492 FSEKPVTMIASHSDGT-HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKN 550
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
ACG ++A + S+G+L+TWG G+ GRLGHG+ + L+PT V AL
Sbjct: 551 ITFIACGSTYSAVL------------SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTAL 598
Query: 297 VEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE 354
VACG S T+ +T SG V++ G YG+LG DG ++ KL V
Sbjct: 599 NGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 658
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
++ CG A LT+ EVYTWGKG RLGHG+ + P ++E LK K+VK + G
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH 718
Query: 415 TAAICLHKWVSG 426
A+ + V G
Sbjct: 719 VLALTEDQLVYG 730
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 29/361 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ L ++ + C R +++ G V+ + +G S+ +P+ + S
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVY--------MMYYG--SETQYPQRVYGFS 493
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ ++A H A+T +Y+WG+G + G LGHG+ V + PK V ++ +
Sbjct: 494 EKPVTMIASHSDGTHYLALTQDSSVYSWGNG--DGGRLGHGDRVWYDEPKLVEALVDK-N 550
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
++ I+CG ++AV++S G+L+T+G G +G LGHG+ +V IP V +L G V ACG
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACG- 609
Query: 245 WHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
S + C +SG +F+WGDG+ G+LG G + P V L++ N
Sbjct: 610 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 658
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+V CG + ALT G VYT G +LG+ + +V L V+E+ G++H
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFH 718
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
V LT VY WG+ G++ P+L L K + +ACG + A C
Sbjct: 719 VLALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWCTSA 778
Query: 423 W 423
W
Sbjct: 779 W 779
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P ESL LR V+ G AV
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--------- 4308
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK++ G G GRLG G ++ +VPT + ++ +VA G +AL++ G
Sbjct: 4309 ---ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4365
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
HVY+ G G+LG+ + P +E L V+ IACG +H A +TS +YTWGK
Sbjct: 4366 HVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 4424
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD++D+ +P LVEAL+D +V +ACG+ +C+
Sbjct: 4425 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4467
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 27/291 (9%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG G E + + L + ++ G VT+ G+++
Sbjct: 4258 SGAIYGWGHN--HRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVY 4314
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAV--------------NSGGKHCLA 4360
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G +++WG+GD G+LGHG++ P + L+ +ACG + A+T++G +Y
Sbjct: 4361 LSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 4420
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS L T V++WG G
Sbjct: 4421 TWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4480
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSG 426
G+LG G +D P +E+L V + CG+ F+ A+ ++ W G
Sbjct: 4481 YGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4531
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 114/271 (42%), Gaps = 63/271 (23%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WGEG DG LG G V +D P+ +ES +++IACG H+A +
Sbjct: 3360 GKIFSWGEGE-DGKLGHG-------NSVSLDK--PRLIESLKSKRIRDIACGSGHSAAIT 3409
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + + PKL+ +L + VACG + T A+T G +Y
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3469
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3470 SWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYF 3529
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHGN+ P V G L G V ++ G H VT GQ++ +GD G G+G
Sbjct: 3530 RLGHGNDHHVRKPTLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGST 3588
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P V L R R +CG H+ A V
Sbjct: 3589 IVNKKPSLVHELDDARVNRVSCGSSHSIAWV 3619
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P H+AV + +G LG + +P E L L+ + A G T VV
Sbjct: 3251 PQHSAV-------YVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGS-KTLFVV 3302
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK----EAKLVPTCVAALVEPNFCRVACG 307
GKL+ G+G GRLG GD E KL+P +++
Sbjct: 3303 S-----------QEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGK 3351
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
H+L ALT G +++ G G+LG+ + R+ L + +IACGS H A +T
Sbjct: 3352 HAL--ALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3409
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGDT + P LV++L ++V +ACG+ + L
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMAL 3462
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G R+G G P +E V ++A G H V
Sbjct: 3518 GEVWTWGKG--------DYFRLG--HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVT 3567
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
G+V++WG+ G+ G+G P L+ L + + V+CG H+ A L+
Sbjct: 3568 DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3621
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WG+G G R+G G + PK +E V+ + G H
Sbjct: 672 AYGEVYTWGKGEG--------YRLG--HGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLA 721
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+ + V+ WG G++ + + V P L LS NI +ACG
Sbjct: 722 LTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACG 767
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 194/373 (52%), Gaps = 30/373 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNR---VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA- 88
G V WG G DG LG G V + D + P + S V+ CG H
Sbjct: 39 GVVCSWGRGE-DGQLGHGDAEDRPVPTVLTAAFDDA-PGGVASVVI-------CGADHTT 89
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
A +++ +++SWG GRLGHG SDV +P+ I AL + I +ACG+ H AVT++G
Sbjct: 90 AYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGH 149
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++WG G LG GN +P+++ EG+ V I+ G HTA VT G L+ +G
Sbjct: 150 VHSWG--RNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWG 206
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G +G LG GDR IP +V S+ G + V ACG HT V SSG +
Sbjct: 207 WGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV------------SSSGSI 254
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+T+G G+LGHGD E LVP + AL + +++ G T+AL G +Y G +
Sbjct: 255 YTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKF 314
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQ+G D P +V + V+ +ACG H LT V++WG+G +G+LGHG+
Sbjct: 315 GQVGVGDNEDHCSPVQVNFPNEQKVVQ-VACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 373
Query: 388 TDDRNSPSLVEAL 400
DRN P +++AL
Sbjct: 374 IVDRNIPKMIDAL 386
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 191/366 (52%), Gaps = 26/366 (7%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D ++P+A E +VVL I+ G H+ + G V SWG G+LGHG D P ++
Sbjct: 11 DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66
Query: 123 DALSNMN----IELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
A + +V CG HT A + LY+WG G +FG LGHGN + P+ +
Sbjct: 67 TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWG--DFGRLGHGNSSDVFNPQPIQ 124
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L+G+ ++ I+CG H VT AG + ++G G LG G+ + +P+++++ +G+R
Sbjct: 125 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A G HTAAV E G L+ WG G G LG GD++ +L+P V+++
Sbjct: 184 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 231
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEI 356
VACG T+ +++SG +YT G YGQLG+ D +P+++E L + + +I
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDTTISQI 290
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
+ G H L + ++Y WG G++G GD +D SP V +++V +ACG T
Sbjct: 291 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 350
Query: 417 AICLHK 422
A+ K
Sbjct: 351 ALTEAK 356
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 44 DGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG 101
DG L G G N+ G G D P + V +ACG RH + + VFSWG
Sbjct: 303 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 362
Query: 102 EESGGRLGHGVDSDVLHPKLIDALSN 127
+ G+LGHG D PK+IDALS+
Sbjct: 363 RGTSGQLGHGEIVDRNIPKMIDALSS 388
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 201/392 (51%), Gaps = 40/392 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG G + G N + + Q + CG ++
Sbjct: 4073 DVFLWGAGRHGQLAEAGRNILVPTIAPSFSQA-------------QQVVCGQNCTFVIQP 4119
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4120 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4179
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVT+ G+LFTFG+G
Sbjct: 4180 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4236
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P +V +L+G + ACG+ HT V S+ +
Sbjct: 4237 DYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVV-------------SADGMMV 4283
Query: 271 W--GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
W GDGD G+LG G+ AK P V L +VACG +VALT G V+T G
Sbjct: 4284 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRL 4343
Query: 329 GQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
+G P+ + P +V G LS ++++A G+ H VL+S +VYTWG + G+LG
Sbjct: 4344 --IGLPEGRARNHNRPQQVPG-LSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGL 4400
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G T+ P+LV L+ K + I+ G +AA
Sbjct: 4401 GHTNHVREPTLVTTLQGKNIHQISAGRCHSAA 4432
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ SS D Q I G +++
Sbjct: 380 EVYVWGSNSSHQLVEGTQEKI---LQPKLASSFA---------DAQTIEAGQYCTFVISS 427
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + I+ V+ + HT A T G+++
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A V+ G+L+T+G+G
Sbjct: 488 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 545
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 546 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 592
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 652
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + V +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 653 CGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 711
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 712 PITKPKKVIGLDGVAIQQISAGTSHSLA 739
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 156/306 (50%), Gaps = 26/306 (8%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4150 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4208
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P++V LEG HV
Sbjct: 4209 EEVVQMSCGFKHSAVVTADGKLFTFGNGDY--GRLGLGNTSNKKLPEKVTA-LEGYHVGQ 4265
Query: 188 ISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CG HT VV++ G + + FGDG +G LG G+ + S P++V+ L G+ + ACG
Sbjct: 4266 VACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 4325
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+ A+ + GK+FT+G L G P V L + VA
Sbjct: 4326 SVALTK------------DGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAV 4373
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G T+ L+++G VYT GS GQLG N + L ++GK + +I+ G H
Sbjct: 4374 GAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVTTLQGK----NIHQISAGRCH 4429
Query: 363 VAVLTS 368
A T+
Sbjct: 4430 SAAWTA 4435
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG G+L ++L P + + S + V CG+ T + +G + G+G
Sbjct: 4073 DVFLWGAGRHGQLAEA-GRNILVPTIAPSFSQA--QQVVCGQNCTFVIQPNGTVLACGEG 4129
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4130 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4186
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V + GKLFT+G
Sbjct: 4187 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFG 4234
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQL 331
+GD GRLG G+ K +P V AL + +VACG + T+ ++ G V+ G YG+L
Sbjct: 4235 NGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKL 4294
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT +V+T+G+ L G +
Sbjct: 4295 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARN 4353
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ +A G T +
Sbjct: 4354 HNRPQQVPGLSGIHIQDVAVGAEHTLVL 4381
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 25/305 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4176 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4225
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P+ + AL ++ VACG HT V+ G + W
Sbjct: 4226 ADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVVSADG-MMVW 4284
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G++FTFG
Sbjct: 4285 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRL 4343
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT + S+G ++TWG
Sbjct: 4344 IGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVL------------SSTGDVYTWG 4391
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT-SGHVYTMGSPVYGQL 331
+G+LG G PT V L N +++ G + A T S GS V QL
Sbjct: 4392 SNSEGQLGLGHTNHVREPTLVTTLQGKNIHQISAGRCHSAAWTAPSVPPRAPGSSVPLQL 4451
Query: 332 GNPQA 336
G P A
Sbjct: 4452 GLPAA 4456
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 34/307 (11%)
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
T V+ + ++Y WG + + L G + PK + + +I G + T V+
Sbjct: 371 ETPVVSETCEVYVWGSNSSH--QLVEGTQEKILQPKLASSFADA---QTIEAGQYCTFVI 425
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV-WHTAAVVEVMV 255
+S G + G G++G LG GD + S +++ E + ++ V ++ G HT A
Sbjct: 426 SSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT---- 481
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVAL 314
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A+
Sbjct: 482 --------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 533
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEV 372
+ G +YT G +G+LG+ ++ + +P V+ S V E++CGS H L+ V
Sbjct: 534 SEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTV 590
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
+++G G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+ ++ W G
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA- 649
Query: 429 QSMCSGC 435
C GC
Sbjct: 650 ---CLGC 653
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 468 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 518
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V++ GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 519 VVVCV---SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 573
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 574 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 631
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 632 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL-- 687
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V L +++ G S +
Sbjct: 688 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHS 737
Query: 312 VALT 315
+A T
Sbjct: 738 LAWT 741
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 194/373 (52%), Gaps = 30/373 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNR---VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA- 88
G V WG G DG LG G V + D + P + S V+ CG H
Sbjct: 44 GVVCSWGRGE-DGQLGHGDAEDRPVPTVLTAAFDDA-PGGVASVVI-------CGADHTT 94
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
A +++ +++SWG GRLGHG SDV +P+ I AL + I +ACG+ H AVT++G
Sbjct: 95 AYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGH 154
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++WG G LG GN +P+++ EG+ V I+ G HTA VT G L+ +G
Sbjct: 155 VHSWG--RNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWG 211
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G +G LG GDR IP +V S+ G + V ACG HT V SSG +
Sbjct: 212 WGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV------------SSSGSI 259
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+T+G G+LGHGD E LVP + AL + +++ G T+AL G +Y G +
Sbjct: 260 YTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKF 319
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQ+G D P +V + V+ +ACG H LT V++WG+G +G+LGHG+
Sbjct: 320 GQVGVGDNEDHCSPVQVNFPNEQKVVQ-VACGWRHTLALTEAKNVFSWGRGTSGQLGHGE 378
Query: 388 TDDRNSPSLVEAL 400
DRN P +++AL
Sbjct: 379 IVDRNIPKMIDAL 391
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/366 (33%), Positives = 191/366 (52%), Gaps = 26/366 (7%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D ++P+A E +VVL I+ G H+ + G V SWG G+LGHG D P ++
Sbjct: 16 DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 71
Query: 123 DALSNMN----IELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
A + +V CG HT A + LY+WG G +FG LGHGN + P+ +
Sbjct: 72 TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWG--DFGRLGHGNSSDVFNPQPIQ 129
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L+G+ ++ I+CG H VT AG + ++G G LG G+ + +P+++++ +G+R
Sbjct: 130 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 188
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A G HTAAV E G L+ WG G G LG GD++ +L+P V+++
Sbjct: 189 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 236
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEI 356
VACG T+ +++SG +YT G YGQLG+ D +P+++E L + + +I
Sbjct: 237 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLE-ALKDTTISQI 295
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
+ G H L + ++Y WG G++G GD +D SP V +++V +ACG T
Sbjct: 296 SGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTL 355
Query: 417 AICLHK 422
A+ K
Sbjct: 356 ALTEAK 361
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 44 DGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG 101
DG L G G N+ G G D P + V +ACG RH + + VFSWG
Sbjct: 308 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWG 367
Query: 102 EESGGRLGHGVDSDVLHPKLIDALSN 127
+ G+LGHG D PK+IDALS+
Sbjct: 368 RGTSGQLGHGEIVDRNIPKMIDALSS 393
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 214/425 (50%), Gaps = 26/425 (6%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L +A G + V G+V+
Sbjct: 3940 DGSG-AIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVY 3998
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
S G + GRLG G V+ P L++++ ++ I+ VA G H A++ G +Y+WG+G
Sbjct: 3999 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEG- 4057
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN++S+ PK + L G+ + I+CG H+A +TSAG L+T+G G +G LG
Sbjct: 4058 -DDGKLGHGNKMSYDRPKLIEDLL-GVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLG 4115
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD P+ VE+L+ + + ACG + + C + +++WGDG
Sbjct: 4116 HGDSDDQLRPKVVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4163
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4164 DYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4223
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K + IA GS H + K EV+TWG G+LG G T +
Sbjct: 4224 TDDHVRRPRKVAALQGKKII-SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHR 4282
Query: 394 PSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCG 453
P LV AL+ K++ +ACG+ T A K M + + ++ K ++
Sbjct: 4283 PRLVHALQGKKITRVACGSAHTLAWSTAK---ATQSRMPASTPMEYDLVKDLSYSVLRNR 4339
Query: 454 LVFCH 458
LV H
Sbjct: 4340 LVLLH 4344
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 203/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 2963 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSEVLSKLKPIHIAGGSKTLFIVSQE 3012
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G D++V PK I LS I+ VA G H A+T G +++W
Sbjct: 3013 GKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3072
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN +S PK + L+ + I+CG H+A + S G+L+T+G G +
Sbjct: 3073 GEG--EDGKLGHGNNMSLDKPKLIE-TLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3129
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + + P+ V++L G R V+ ACG + + + G +++WG
Sbjct: 3130 GRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTM----------ALTTDGCVYSWG 3179
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P V L +V CG ++ALT G V+T G Y +LG
Sbjct: 3180 DGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3239
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3240 HGNDHHVRKPTLVEGLRGKKIV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVN 3298
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L+D +V ++CG++ + A L
Sbjct: 3299 RKPSLVHELEDARVNRVSCGSSHSIAWVL 3327
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 164/332 (49%), Gaps = 25/332 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG G + + P S V+ + GG+HA +
Sbjct: 3013 GKLYACGEGT-NGRLGLGDDN-------NVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G+VFSWGE G+LGHG + + PKLI+ L + I +ACG H+ A+ +G+LYTW
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ V+ PK V L G V ++CG T +T+ G ++++GDG
Sbjct: 3125 GLGEY--GRLGHGDTVTQARPKLVQ-TLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G P VE L GL V+ CG + A+ + G+++T
Sbjct: 3182 DFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKY------------GEVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG+ PT V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3289
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GN + +L + V ++CGS H
Sbjct: 3290 QGNGTTSVNRKPSLVHELEDARVNRVSCGSSH 3321
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 154/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G KM PK +E + +++ +IACGG H+A +
Sbjct: 4049 GHVYSWGEG-DDGKLG---------HGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAIT 4098
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PK+++AL + + VACG + T VT +++
Sbjct: 4099 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4158
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4159 SWGDGDY--GKLGRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4215
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLF 269
+ LGHG V PR+V +L+G + + A G H A CS G++F
Sbjct: 4216 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGEVF 4262
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P V AL RVACG + T+A +T+
Sbjct: 4263 TWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWSTA 4310
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 176/335 (52%), Gaps = 37/335 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG G + G+G P DA++ + I+ + C E ++L+G++Y
Sbjct: 441 EVLAWG---GVKFGNGST-----PFYCDAIAELGIKQLCCTERALMILSLNGNVYN---- 488
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGI--HVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ HG+E + P+RV+G + + ++S S G H A+ T G ++++G+G G
Sbjct: 489 ------MYHGSETQY--PQRVHGFSDKLVTMIASHSDGKHHLAL-TQDGCVYSWGNGDGG 539
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD S P+ +E+L V ACG ++AA+ SG+L+TWG
Sbjct: 540 RLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAAL------------SVSGELYTWGR 587
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHG+ + ++PT V L VACG S T+ +T SG V++ G YG+L
Sbjct: 588 GNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 647
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G DG ++ KL V ++ CGS A LT+ EVYTWGKG RLGHG +
Sbjct: 648 GRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHV 707
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P ++E+L+DK++K ++ G + ++V G
Sbjct: 708 RYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYG 742
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 190/375 (50%), Gaps = 34/375 (9%)
Query: 59 GVKM-DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
GVK + S P ++ L ++ + C R +++ G V++ + HG S+
Sbjct: 447 GVKFGNGSTPFYCDAIAELGIKQLCCTERALMILSLNGNVYN--------MYHG--SETQ 496
Query: 118 HPKLIDALSNMNIELVAC---GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
+P+ + S+ + ++A G++H A+T G +Y+WG+G + G LGHG+ VS+ PK
Sbjct: 497 YPQRVHGFSDKLVTMIASHSDGKHH-LALTQDGCVYSWGNG--DGGRLGHGDTVSYDEPK 553
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
+ LE ++ I+CG ++A ++ +G+L+T+G G +G LGHG+ V IP V +LKG
Sbjct: 554 LIEALLEK-NIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKG 612
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
V ACG S + C +SG +F+WGDGD G+LG G + P
Sbjct: 613 HTVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKI 660
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKS 351
V L++ N +V CG + ALT G VYT G +LG+ + + P +E L
Sbjct: 661 VDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIES-LRDK 719
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+++++ G+ H+ VLT VY WG+ G++ + P+L L K V +A G
Sbjct: 720 KIKDLSVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASG 779
Query: 412 TNFTAAICLHKWVSG 426
+ A C+ W G
Sbjct: 780 PTQSFAWCMSAWSGG 794
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 168/331 (50%), Gaps = 21/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
++ V+ WG +LG S + P + LS + +A G V+ G LY
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3018
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGD 209
G+GT G LG G++ + PK + P I ++ G H +T G++F++G+
Sbjct: 3019 GEGTN--GRLGLGDDNNVCEPKPI--PFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGE 3074
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGHG+ S+ P+ +E+LK R ACG H+AA+ S+G+L+
Sbjct: 3075 GEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAI------------ASNGELY 3122
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHGD + P V LV +VACG + T+ALTT G VY+ G
Sbjct: 3123 TWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGD 3182
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+G+LG +DG V +L+ V ++ CG+ LT EV+TWGKG RLGHG+
Sbjct: 3183 FGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3242
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P+LVE L+ K++ +A G A+
Sbjct: 3243 DHHVRKPTLVEGLRGKKIVHVAVGALHCLAV 3273
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 137/282 (48%), Gaps = 32/282 (11%)
Query: 143 VTLSGDL-YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ + GD YT +N GH ++ W+ +R W T +
Sbjct: 3898 MAMDGDTEYTKDHENHNIFKQGHDEQLLQWLNRRPED--------------W-TLSWDGS 3942
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
G ++ +G G LG + V +P ESL LR ++ A G AV
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT---------- 3992
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
+ GK+++ G G GRLG G ++ ++PT + ++ +VA G +AL++ GH
Sbjct: 3993 --ADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGH 4050
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ + P +E L ++ IACG +H A +TS +YTWGKG
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIID-IACGGHHSAAITSAGWLYTWGKG 4109
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD+DD+ P +VEAL+D +V +ACG+ +C+
Sbjct: 4110 RYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 116/282 (41%), Gaps = 65/282 (23%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG G N M PK +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEGE-DGKLGHGNN---------MSLDKPKLIETLKSKRIRDIACGSGHSAAIA 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG PKL+ L + VACG + T A+T G +Y
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVY 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHGN+ P V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3237 RLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
P V L+ R R +CG H+ A V+V SS N
Sbjct: 3296 SVNRKPSLVHELEDARVNRVSCGSSHSIA--WVLVDQPSSGN 3335
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 86/172 (50%), Gaps = 14/172 (8%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GKL+ G+G GRLG GD P + L + +VA G +ALT G V++
Sbjct: 3013 GKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3072
Query: 324 GSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G G+LG N D P +E SK + +IACGS H A + S E+YTWG G
Sbjct: 3073 GEGEDGKLGHGNNMSLDK--PKLIETLKSKR-IRDIACGSGHSAAIASNGELYTWGLGEY 3129
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN------FTAAICLHKWVSG 426
GRLGHGDT + P LV+ L +V +ACG+ T C++ W G
Sbjct: 3130 GRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDG 3181
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSY 361
+VA S+ VY G QLG + KLP E LSK IA GS
Sbjct: 2946 QVAVQRSIDATPPQESAVYVWGLNDKDQLGGLKGSKIKLPVYSE-VLSKLKPIHIAGGSK 3004
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
+ +++ + ++Y G+G NGRLG GD ++ P + L +K +A + A+ L
Sbjct: 3005 TLFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064
Query: 422 K------WVSGVDQSMCSGCRLPFN------NFKRKRHNCYNCG 453
+ W G D + G + + K KR CG
Sbjct: 3065 QDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACG 3108
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 206/396 (52%), Gaps = 41/396 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 2623 DVFLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 2669
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 2670 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2729
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 2730 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2786
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRA-------ACGVWHTAAVVEVMVGNSSSSNC 263
+G LG G+ + +P V +L+G + +A ACG+ HT AV +
Sbjct: 2787 DYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV-----------ST 2835
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
++ +GDGD G+LG G+ AK P V L +VACG +VALT GHVYT
Sbjct: 2836 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 2895
Query: 324 GSPVYGQLGNPQADGKLPNRVEGK--LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G +G P+ + NR + L+ +E++A G+ H L S +VY WG + G
Sbjct: 2896 GQDRL--IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEG 2953
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+LG G T+ P+LV L+ K ++ I+ G +AA
Sbjct: 2954 QLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 2989
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 167/335 (49%), Gaps = 31/335 (9%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 2623 DVFLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 2679
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 2680 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2736
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 2737 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 2784
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-------VACGHSLTVALTTSG-HVYTMG 324
+GD GRLG G+ K +P V AL + VACG + T+A++T G V+ G
Sbjct: 2785 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFG 2844
Query: 325 SPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
YG+LG + K P +V+ L ++++ACG+ LT VYT+G+ L
Sbjct: 2845 DGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL 2903
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G + N P V L ++ +A G T A+
Sbjct: 2904 PEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 2938
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 152/313 (48%), Gaps = 33/313 (10%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 2700 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 2758
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS- 186
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG +
Sbjct: 2759 EEVVQMSCGFKHSAVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQ 2815
Query: 187 ------SISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
S++CG HT V++ G + + FGDG +G LG G+ + S P++V+ L G+ +
Sbjct: 2816 AWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKK 2875
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG + A+ + G ++T+G L G P V L
Sbjct: 2876 VACGTQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGV 2923
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEE 355
VA G T+AL ++G VY GS GQLG N + L ++GK + +
Sbjct: 2924 VIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----NIRQ 2979
Query: 356 IACGSYHVAVLTS 368
I+ G H A T+
Sbjct: 2980 ISAGRCHSAAWTA 2992
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 31/290 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 2726 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 2775
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-------ELVACGEYHTCAVTL 145
G++F++G GRLG G S+ P+ + AL I VACG HT AV+
Sbjct: 2776 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVST 2835
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G + W G ++G LG GN + P++V+ L GI + ++CG + +T G ++
Sbjct: 2836 DGSM-VWAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVY 2893
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
TFG L G ++ + P++V L G+ A G HT A+ S+
Sbjct: 2894 TFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL------------AST 2941
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G ++ WG +G+LG G PT V L N +++ G + A T
Sbjct: 2942 GDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWT 2991
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 36 FIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+W G GD G LG G S P+ ++ + ++ +ACG + + + K
Sbjct: 2839 MVWAFGDGDYGKLG---------LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 2889
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V+++G++ L G + P+ + L+ + IE VA G HT A+ +GD+Y WG
Sbjct: 2890 GHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 2949
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ LGH N V P V L+G ++ IS G H+A T+
Sbjct: 2950 NSEGQLGLGHTNHVRE--PTLVT-VLQGKNIRQISAGRCHSAAWTA 2992
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 191/365 (52%), Gaps = 29/365 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGE 96
WG G DG LG G D LP L + + ++ CG H A + E
Sbjct: 39 WGRGE-DGQLG---------HGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVE 88
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG GRLGHG SD+ P+ I AL + I+ +ACG+ H AVT+ G++ +WG
Sbjct: 89 VYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRN- 147
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ +G+ + ++ G H+ +T G+L+ +G G +G LG
Sbjct: 148 -QNGQLGLGTTEDSLVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLG 205
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GDR IP +V S+ + V ACG HT +V SSG+L+T+G
Sbjct: 206 LGDRNDRCIPEKV-SVDCDKMVLVACGWRHTISV------------SSSGELYTYGWSKY 252
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
G+LGHGD + LVP + A + C+V+ G T+ALTT G +Y G +GQ+G
Sbjct: 253 GQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDN 312
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
D P +V+ + V +I+CG H +T K VY+WG+G NG+LG GDT D N P
Sbjct: 313 VDRCSPVQVKFPHDQK-VAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPK 371
Query: 396 LVEAL 400
++EAL
Sbjct: 372 IIEAL 376
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 190/369 (51%), Gaps = 23/369 (6%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ GG H+ + V SWG G+LGHG D L P + AL I V CG HT
Sbjct: 20 ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHT 79
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + S ++Y+WG G +FG LGHGN ++P+ + L+G+ + I+CG H VT
Sbjct: 80 LAYSESKVEVYSWGWG--DFGRLGHGNSSDLFIPQPIRA-LQGLRIKQIACGDSHCLAVT 136
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG G + +P+++++ +G+ A G H+ A+ E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 189
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+G+L+ WG G G LG GD+ + +P V+ + VACG T+++++SG
Sbjct: 190 -----NGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCD-KMVLVACGWRHTISVSSSGE 243
Query: 320 VYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P++++ S + +++ G H LT+ ++Y WG
Sbjct: 244 LYTYGWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWGWN 302
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSG 434
G++G GD DR SP V+ D++V I+CG T A+ ++ W G + + G
Sbjct: 303 KFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIG 362
Query: 435 CRLPFNNFK 443
+ +N K
Sbjct: 363 DTIDWNYPK 371
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 27/313 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V+ WG G R+G G D +P+ + + L ++ IACG H V
Sbjct: 88 EVYSWGWGD--------FGRLG--HGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTM 137
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+GEV SWG G+LG G D L P+ I + I++VA G H+ A+T +G+LY WG
Sbjct: 138 EGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWG 197
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ +P++V+ + + + ++CG HT V+S+G+L+T+G +G
Sbjct: 198 WGRY--GNLGLGDRNDRCIPEKVSVDCDKMVL--VACGWRHTISVSSSGELYTYGWSKYG 253
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD K +P ++++ + + G HT A+ + G+L+ WG
Sbjct: 254 QLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALT------------TGGQLYGWGW 301
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG- 332
G++G GD + P V + +++CG T+A+T +VY+ G GQLG
Sbjct: 302 NKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGI 361
Query: 333 NPQADGKLPNRVE 345
D P +E
Sbjct: 362 GDTIDWNYPKIIE 374
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 42 TGDGVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
TG + G G N+ G G +D P ++ V I+CG RH V ++ V+SW
Sbjct: 292 TGGQLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSW 351
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALS 126
G + G+LG G D +PK+I+ALS
Sbjct: 352 GRGTNGQLGIGDTIDWNYPKIIEALS 377
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 196/391 (50%), Gaps = 38/391 (9%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G R G G + +LP + + Q + CG + L+
Sbjct: 3682 DVYLWGNG-----------RYGQLAGTGTNLTLPTL--APCLSQTQQVVCGQNCSFLIQS 3728
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE GRLG G D+ P +I A + +LV +CG + H+ A+T +G+++
Sbjct: 3729 NGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3788
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LGHGN PK++ L+G V ++CG H+AVVT+ G+LFTFG G
Sbjct: 3789 SWGDG--DFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3845
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG + P V +L+G + +CG+ HT + + ++
Sbjct: 3846 ESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVL-----------SLDGMAVWA 3894
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G AK P V L +V CG +V L T GHVYT G
Sbjct: 3895 FGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERL-- 3952
Query: 331 LGNPQADGKLPNR----VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+G P D L NR V L F+E+IA G HV L+S ++Y WG + G+LG G
Sbjct: 3953 IGLP--DSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLG 4010
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ AL+ K +K I+ G ++A
Sbjct: 4011 HCNLVKEPTLITALQGKNIKQISAGRCHSSA 4041
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 203/435 (46%), Gaps = 38/435 (8%)
Query: 28 DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
DGDA+ V++WG + + G L ++ LPK + D Q I G
Sbjct: 334 DGDAV-TVYVWGSNSSHQLAEGTLEKI----------LLPKLTQG--FSDAQTIEAGQYC 380
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVT 144
V+ G V + G+ S GRLG G ++ PK + + NI+ V + HT A+T
Sbjct: 381 TFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAIT 440
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
+ G++++WGDG Y G LGHGN + PK V GPL V S S G H+A VT+ G+L
Sbjct: 441 VDGEVFSWGDGEY--GKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGEL 498
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+T+G+G FG LGH D +S + P V+ + G+ V ACG HT AV +
Sbjct: 499 YTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQV--ACGSSHTIAVAQ-----------D 545
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
++++G GD G+LGHGD P + AL +V G ++ALT++G V+ G
Sbjct: 546 GRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWG 605
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G+ + P VE LS + + +I+CG H L+ + EVY WG G+ G
Sbjct: 606 CGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCG 664
Query: 385 HGDTDDR-NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFK 443
G T P V L+ ++ I GT+ + A W + PF
Sbjct: 665 QGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA-----WTAVPTDRQLVAWHRPFCVDL 719
Query: 444 RKRHNCYNCGLVFCH 458
+ Y C + C+
Sbjct: 720 EESTFTYLCNFLKCY 734
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 155/338 (45%), Gaps = 31/338 (9%)
Query: 6 MDAFRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
+ AF+ + + + +S GH G+VF WG+G G LG G N
Sbjct: 3757 ISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF-GKLGHGNNE---------RQ 3806
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
PK +E+ DV +ACG RH+A+V G++F++G GRLG S+ + P+ + A
Sbjct: 3807 RRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQPERVAA 3866
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L ++ V+CG HT ++L G + W G ++G LG G+ + + P++V L
Sbjct: 3867 LEGYHVGQVSCGLNHTLVLSLDG-MAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ-LCNKG 3924
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ + CG + V+ + G ++TFG L K+ S P+ V SL+GL A G
Sbjct: 3925 MKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGC 3984
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H A+ S+G ++ WG +G+LG G PT + AL N ++
Sbjct: 3985 EHVLAL------------SSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITALQGKNIKQI 4032
Query: 305 ACGHSLTVALTT------SGHVYTMGSPVYGQLGNPQA 336
+ G + A T S G P QLG PQ+
Sbjct: 4033 SAGRCHSSAWTAPSTSKNSALCPCQGGPGSVQLGLPQS 4070
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
D+Y WG+G Y L G G ++ +P P + CG + ++ S G +
Sbjct: 3682 DVYLWGNGRYG-QLAGTGTNLT--LPTL--APCLS-QTQQVVCGQNCSFLIQSNGAVMAV 3735
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVR--AACGV-WHTAAVVEVMVGNSSSSNCS 264
G+G +G LG G+ + +P + + +G + +CG H+ A+ E
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTE------------ 3783
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+G++F+WGDGD G+LGHG+ E + P + AL + ++ACG + +T G ++T G
Sbjct: 3784 TGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFG 3843
Query: 325 SPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWGKGANGR 382
S G+LG K+ P RV L V +++CG H VL+ V+ +G G G+
Sbjct: 3844 SGESGRLGQRSTSNKMQPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3902
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG G + + P VE L +K +K + CG F+ +
Sbjct: 3903 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVL 3938
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 24/223 (10%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++ +G+G +G L G ++++P L +T + CG N S
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCLS--QTQQVVCG------------QNCSFLIQ 3727
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC-----GHSLTVALTTSG 318
S+G + G+G GRLG G+ + VPT ++A ++ GHS+ ALT +G
Sbjct: 3728 SNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSM--ALTETG 3785
Query: 319 HVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
V++ G +G+LG+ + + P ++E L V ++ACG H AV+T+ +++T+G
Sbjct: 3786 EVFSWGDGDFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGS 3844
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G +GRLG T ++ P V AL+ V ++CG N T + L
Sbjct: 3845 GESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSL 3887
>gi|308808460|ref|XP_003081540.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
gi|116060005|emb|CAL56064.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
Length = 937
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 198/404 (49%), Gaps = 42/404 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P A+E LDV I+ G RH + G V+SWGE GG+LG D P +D L
Sbjct: 236 PSAIEGMETLDVVEISIGARHTLARTRTGAVYSWGEGKGGKLGIPSGQDFDRPTRVD-LD 294
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-HWVPKRVNGPLEGIHV 185
+ L +CG H+ AV + G+++ WGD GLLG + S W P ++ P +
Sbjct: 295 GRAVAL-SCGSAHSVAV-VEGEVFAWGDPNAAPGLLGLSDVRSVMWFPGKILFPSATGTL 352
Query: 186 SS----------------ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
S+ +SCGP HTA VT G +T+G+G+F LGHGDR+S PR++
Sbjct: 353 SAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACYTWGEGSFFALGHGDRESSREPRKL 412
Query: 230 ESLKGLRTV--RAACGVWHTAAVVE----------VMVGNSSSSNCSSGKLFTWGDGDKG 277
E+ R V R +CGVWHTAA+V V S + G+LFTWGDG+ G
Sbjct: 413 ETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPVPTNEESEFDSVDGELFTWGDGETG 472
Query: 278 RLGHGDKEAKLVPTCVA-ALVEP--NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
+LG D VPT + L EP C V+CG TVALT+ G ++ G G++ N
Sbjct: 473 QLGIRDSTEAPVPTKTSNRLGEPGSEVCSVSCGQHHTVALTSQGDLWLAG--CVGKVDNS 530
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD-DRNS 393
+ + V +A G HV T V++WG G NGRLG G D D+
Sbjct: 531 LRTTTFTRLTDFETGS--VRTVASGENHVVASTRDARVFSWGVGKNGRLGLGRNDRDQPV 588
Query: 394 PSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRL 437
P + ++ ++V IACG T++ C+ + V + S RL
Sbjct: 589 PQEIVNMRGREVLHIACGP--TSSACVLRGVQMTIKEKASMARL 630
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 153/400 (38%), Gaps = 82/400 (20%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG G ++G G D L+ V ++CG H+ V
Sbjct: 264 GAVYSWGEGKG--------GKLGIPSGQDFDRPTRVDLDGRAVA----LSCGSAHSVAV- 310
Query: 93 KQGEVFSWGEESG--GRLGHG-------VDSDVLHPKLIDALS-----------NMNIEL 132
+GEVF+WG+ + G LG +L P LS + +
Sbjct: 311 VEGEVFAWGDPNAAPGLLGLSDVRSVMWFPGKILFPSATGTLSAHRGARSLGGGGVKVVQ 370
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCG 191
V+CG HT VT +G YTWG+G+ F LGHG+ S P+++ E V +SCG
Sbjct: 371 VSCGPCHTACVTETGACYTWGEGS--FFALGHGDRESSREPRKLETFTRERRVVLRVSCG 428
Query: 192 PWHTAVVTSA----------------------GQLFTFGDGTFGVLGHGDRKSVSIPREV 229
WHTA + +A G+LFT+GDG G LG D +P +
Sbjct: 429 VWHTAAIVAASGSSVVRVPVPTNEESEFDSVDGELFTWGDGETGQLGIRDSTEAPVPTKT 488
Query: 230 ESL---KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
+ G +CG HT A+ S G L+ G +G D
Sbjct: 489 SNRLGEPGSEVCSVSCGQHHTVALT------------SQGDLWL-----AGCVGKVDNSL 531
Query: 287 KLVPTCVAALVEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQ--LGNPQADGKLPNR 343
+ E R VA G + VA T V++ G G+ LG D +P
Sbjct: 532 RTTTFTRLTDFETGSVRTVASGENHVVASTRDARVFSWGVGKNGRLGLGRNDRDQPVPQE 591
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+ + + IACG A + ++ K + RL
Sbjct: 592 IVNMRGREVL-HIACGPTSSACVLRGVQMTIKEKASMARL 630
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 134/337 (39%), Gaps = 59/337 (17%)
Query: 10 RVSLSSAVSSSSQGSGHDDGDALGDVFIWGE-GTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
RV L + S GS H G+VF WG+ G+L GL+ V S P
Sbjct: 290 RVDLDGRAVALSCGSAHSVAVVEGEVFAWGDPNAAPGLL--GLSDVRSVMWFPGKILFPS 347
Query: 69 ALES-----------AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
A + + V ++CG H A V + G ++WGE S LGHG
Sbjct: 348 ATGTLSAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACYTWGEGSFFALGHGDRESSR 407
Query: 118 HPKLIDALSNMN--IELVACGEYHTCAV----------------------TLSGDLYTWG 153
P+ ++ + + V+CG +HT A+ ++ G+L+TWG
Sbjct: 408 EPRKLETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPVPTNEESEFDSVDGELFTWG 467
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
DG G LG + VP + + L G V S+SCG HT +TS G L+ G
Sbjct: 468 DG--ETGQLGIRDSTEAPVPTKTSNRLGEPGSEVCSVSCGQHHTVALTSQGDLWLA--GC 523
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G + + R + +RTV A G H A + ++F+W
Sbjct: 524 VGKVDNSLRTTTFTRLTDFETGSVRTV--ASGENHVVA------------STRDARVFSW 569
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACG 307
G G GRLG G + + VP + + +ACG
Sbjct: 570 GVGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACG 606
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 204/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 3261 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSEVLSKLKPIHIAGGSKTLFVVSQE 3310
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G DS+V PKLI LS I+ +A G H A+T G +++W
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSW 3370
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN VS P+ + L+ + I+CG H+A +TS+G+L+T+G G +
Sbjct: 3371 GEG--EDGKLGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3427
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ V+SL G R ++ ACG + + + G +++WG
Sbjct: 3428 GRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTM----------ALTADGSVYSWG 3477
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P + L ++ CG ++ALT G V+T G Y +LG
Sbjct: 3478 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3537
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3538 HGNDHHVRKPTLVEGLRGKKVV-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVN 3596
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L D +V ++CG++ + A L
Sbjct: 3597 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3625
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 198/384 (51%), Gaps = 23/384 (5%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L + G + V G+V+
Sbjct: 4289 DGSG-AIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVY 4347
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
+ G + GRLG G V+ P L++++ ++ ++ VA G H A++ G +Y+WG+G
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG- 4406
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN + + PK + L G + I+CG H+A +TSAG L+T+G G +G LG
Sbjct: 4407 -DDGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLG 4464
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD + P+ VE+L+ + + ACG + + C + +++WGDG
Sbjct: 4465 HGDSEDQLTPKLVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4512
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + +P + +L +V CG +VALT SG +YT G Y +LG+
Sbjct: 4513 DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHG 4572
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K + IA GS H T K EV+TWG G+LG G T
Sbjct: 4573 TDDHVRRPRKVAALQGKKII-SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQR 4631
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4632 PRLVHALQGKKITRVACGSAHTLA 4655
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 168/335 (50%), Gaps = 31/335 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE--SAVVLDVQNIACGGRHAAL 90
G ++ GEGT +G LG G + PK + S ++ + GG+HA
Sbjct: 3311 GKLYACGEGT-NGRLG---------LGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALA 3360
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ + G++FSWGE G+LGHG + P+LI++L + I +ACG H+ A+T SG+LY
Sbjct: 3361 LTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3420
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ + PK V L G V ++CG T +T+ G ++++G
Sbjct: 3421 TWGLGEY--GRLGHGDTATQMKPKLVQS-LVGQRVIQVACGSRDAQTMALTADGSVYSWG 3477
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G P ++ L GL V+ CG + A+ + G++
Sbjct: 3478 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY------------GEV 3525
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG+ PT V L VA G +A+T +G VY G +
Sbjct: 3526 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDH 3585
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GQ GN K P+ V +L + V ++CGS H
Sbjct: 3586 GQQGNGSTIVNKKPSLVH-ELDDARVNRVSCGSSH 3619
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 151/286 (52%), Gaps = 27/286 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR + PK +E + ++ +IACGG H+A +
Sbjct: 4398 GHVYSWGEG-DDGKLGHG-NR--------LMYDRPKLIEELLGTEIVDIACGGHHSAAIT 4447
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PKL++AL + + VACG + T VT +++
Sbjct: 4448 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4507
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4508 SWGDGDY--GKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4564
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V +L+G + + A G H A + G++FT
Sbjct: 4565 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEVFT 4612
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
WGD D+G+LG G A P V AL RVACG + T+A +T
Sbjct: 4613 WGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4658
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 178/362 (49%), Gaps = 31/362 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ L ++ + C R +++ G V+ + +G S+ +P+ + S
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVY--------MMYYG--SETQYPQRVYGFS 501
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ ++A H A+T +Y+WG+G + G LGHG+ V + PK V ++ +
Sbjct: 502 EKPVTMIASHSDGTHYLALTQDSSVYSWGNG--DGGRLGHGDRVWYDEPKLVEALVDK-N 558
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
++ I+CG ++AV++S G+L+T+G G +G LGHG+ +V IP V +L G V ACG
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACG- 617
Query: 245 WHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
S + C +SG +F+WGDG+ G+LG G + P V L++ N
Sbjct: 618 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSY 361
+V CG + ALT G VYT G +LG+ + + P +E +K V+E+ G++
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKK-VKELCVGNF 725
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
HV LT VY WG+ G++ P+L L K + +ACG + A C
Sbjct: 726 HVLALTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWCTS 785
Query: 422 KW 423
W
Sbjct: 786 AW 787
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 159/312 (50%), Gaps = 29/312 (9%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P DA++ + I+ + C E +++SG++Y ++ +G+E + P+RV G
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVY----------MMYYGSETQY--PQRVYG 499
Query: 179 PLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
E ++S S G H +T ++++G+G G LGHGDR P+ VE+L
Sbjct: 500 FSEKPVTMIASHSDGT-HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKN 558
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
ACG ++A + S+G+L+TWG G+ GRLGHG+ + L+PT V AL
Sbjct: 559 ITFIACGSTYSAVL------------SSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTAL 606
Query: 297 VEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE 354
VACG S T+ +T SG V++ G YG+LG DG ++ KL V
Sbjct: 607 NGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
++ CG A LT+ EVYTWGKG RLGHG+ + P ++E L K+VK + G
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFH 726
Query: 415 TAAICLHKWVSG 426
A+ + V G
Sbjct: 727 VLALTEDQLVYG 738
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 118/223 (52%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P ESL LR V+ G AV
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--------- 4341
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK++ G G GRLG G ++ +VPT + ++ +VA G +AL++ G
Sbjct: 4342 ---ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4398
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
HVY+ G G+LG+ + P +E L V+ IACG +H A +TS +YTWGK
Sbjct: 4399 HVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 4457
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD++D+ +P LVEAL+D +V +ACG+ +C+
Sbjct: 4458 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4500
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 138/291 (47%), Gaps = 27/291 (9%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG G E + + L + ++ G VT+ G+++
Sbjct: 4291 SGAIYGWGHN--HRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVY 4347
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAV--------------NSGGKHCLA 4393
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G +++WG+GD G+LGHG++ P + L+ +ACG + A+T++G +Y
Sbjct: 4394 LSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 4453
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS L T V++WG G
Sbjct: 4454 TWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4513
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSG 426
G+LG G +D P +E+L V + CG+ F+ A+ ++ W G
Sbjct: 4514 YGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4564
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 114/271 (42%), Gaps = 63/271 (23%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WGEG DG LG G V +D P+ +ES +++IACG H+A +
Sbjct: 3365 GKIFSWGEGE-DGKLGHG-------NSVSLDK--PRLIESLKSKRIRDIACGSGHSAAIT 3414
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + + PKL+ +L + VACG + T A+T G +Y
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3474
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3475 SWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYF 3534
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHGN+ P V G L G V ++ G H VT GQ++ +GD G G+G
Sbjct: 3535 RLGHGNDHHVRKPTLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGST 3593
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P V L R R +CG H+ A V
Sbjct: 3594 IVNKKPSLVHELDDARVNRVSCGSSHSIAWV 3624
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P H+AV + +G LG + +P E L L+ + A G T VV
Sbjct: 3256 PQHSAV-------YVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGS-KTLFVV 3307
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK----EAKLVPTCVAALVEPNFCRVACG 307
GKL+ G+G GRLG GD E KL+P +++
Sbjct: 3308 S-----------QEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGK 3356
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
H+L ALT G +++ G G+LG+ + R+ L + +IACGS H A +T
Sbjct: 3357 HAL--ALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAIT 3414
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGDT + P LV++L ++V +ACG+ + L
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMAL 3467
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WG+G G R+G G + PK +E V+ + G H
Sbjct: 680 AYGEVYTWGKGEG--------YRLG--HGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLA 729
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+ + V+ WG G++ + + V P L LS NI +ACG
Sbjct: 730 LTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACG 775
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G R+G G P +E V ++A G H V
Sbjct: 3523 GEVWTWGKG--------DYFRLG--HGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVT 3572
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
G+V++WG+ G+ G+G P L+ L + + V+CG H+ A L+
Sbjct: 3573 DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3626
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 206/399 (51%), Gaps = 44/399 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 4000 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4046
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4047 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4106
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4107 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4163
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRT----------VRAACGVWHTAAVVEVMVGNSSS 260
+G LG G+ + +P V +L+G + ++ ACG+ HT AV
Sbjct: 4164 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAV---------- 4213
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+ ++ +GDGD G+LG G+ AK P V L +VACG +VALT GHV
Sbjct: 4214 -SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4272
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
YT G +G P+ + NR + L+ +E++A G+ H L S +VY WG
Sbjct: 4273 YTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSN 4330
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ G+LG G T+ P+LV L+ K V+ I+ G +AA
Sbjct: 4331 SEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4369
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 418
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 479 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 583
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 643
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 644 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 702
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLA 730
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 167/338 (49%), Gaps = 34/338 (10%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 4000 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4056
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4057 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4113
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4114 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4161
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPN----------FCRVACGHSLTVALTTSG-HVY 321
+GD GRLG G+ K +P V AL F +VACG + T+A++ G V+
Sbjct: 4162 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVW 4221
Query: 322 TMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G YG+LG + K P +V+ L ++++ACG+ LT VYT+G+
Sbjct: 4222 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 4280
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L G + N P + L ++ +A G T A+
Sbjct: 4281 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4318
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 151/316 (47%), Gaps = 36/316 (11%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4077 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4135
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS- 186
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG +
Sbjct: 4136 EEVVQMSCGFKHSAVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQ 4192
Query: 187 ---------SISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
++CG HT V++ G + + FGDG +G LG G+ + S P++V+ L G+
Sbjct: 4193 ARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIG 4252
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ ACG + A+ + G ++T+G L G P + L
Sbjct: 4253 IKKVACGTQFSVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQIPVL 4300
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSF 352
VA G T+AL ++G VY GS GQLG N + L ++GK
Sbjct: 4301 AGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----N 4356
Query: 353 VEEIACGSYHVAVLTS 368
V +I+ G H A T+
Sbjct: 4357 VRQISAGRCHSAAWTA 4372
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 34/293 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4103 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4152
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI----------ELVACGEYHTCA 142
G++F++G GRLG G S+ P+ + AL I VACG HT A
Sbjct: 4153 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLA 4212
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
V+ G + W G ++G LG GN + P++V+ L GI + ++CG + +T G
Sbjct: 4213 VSADGSM-VWAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDG 4270
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++TFG L G ++ + P+++ L G+ A G HT A+
Sbjct: 4271 HVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALA----------- 4319
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
S+G ++ WG +G+LG G PT V L N +++ G + A T
Sbjct: 4320 -STGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4371
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 151/308 (49%), Gaps = 38/308 (12%)
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T V+ + ++Y WG + + L G + PK + +I G + T V++
Sbjct: 363 TPIVSETCEVYVWGSNSSH--QLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVIS 417
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVM 254
+ G + G G++G LG GD + S +++ S+K + + + + G HT A
Sbjct: 418 TDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDG--HTLAFT--- 472
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVA 313
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A
Sbjct: 473 ---------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAA 523
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TE 371
+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS H L+
Sbjct: 524 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRT 580
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ ++ W G
Sbjct: 581 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 640
Query: 428 DQSMCSGC 435
C GC
Sbjct: 641 ----CLGC 644
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 459 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 509
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 510 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 564
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 565 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 622
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 623 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 678
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 679 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 728
Query: 312 VALT 315
+A T
Sbjct: 729 LAWT 732
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 36 FIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+W G GD G LG G S P+ ++ + ++ +ACG + + + K
Sbjct: 4219 MVWAFGDGDYGKLG---------LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 4269
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V+++G++ L G + P+ I L+ + IE VA G HT A+ +GD+Y WG
Sbjct: 4270 GHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 4329
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ LGH N V P V L+G +V IS G H+A T+
Sbjct: 4330 NSEGQLGLGHTNHVRE--PTLVT-VLQGKNVRQISAGRCHSAAWTA 4372
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 559 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 608
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 609 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 666
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 667 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 723
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 724 GTSHSLAWTA 733
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/393 (34%), Positives = 190/393 (48%), Gaps = 69/393 (17%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ G V+ WG G DG LG G D P +++ V +ACG H
Sbjct: 4 EVAGLVYSWGRGE-DGQLG---------LGDTNDQDRPVLVDALKSKGVVQVACGSGHTV 53
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++++ G V++WG GRLGHG + P++++AL I CG YHT AVT G+L
Sbjct: 54 VLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL-EGIHVSSISCGPWHTAVVTSAGQLFTFG 208
YTWG G Y G LGHGNE H P V EG V+ I+CG HT V+T G+++T+G
Sbjct: 114 YTWGGGMY--GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171
Query: 209 DGTFGVLGHGDRKSVS-IPREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSG 266
D GV+GH + +PR +ESL+ + AACG +HTAA+ ++G
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG-FHTAALT------------AAG 218
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++FTWG+G GRLGHG + ++VP V AL+ VACG + A+ SG +YT G
Sbjct: 219 EIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGG 278
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+GQ VYT+G G +G+LGHG
Sbjct: 279 EHGQ-----------------------------------------VYTFGNGDHGKLGHG 297
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
D + P+LV L V +A TAA+
Sbjct: 298 DVRKVSVPTLVAGLVKMHVVKVASYNEHTAALA 330
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 159/290 (54%), Gaps = 24/290 (8%)
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
++G +Y+WG G G LG G+ P V+ L+ V ++CG HT V++ G +
Sbjct: 5 VAGLVYSWGRG--EDGQLGLGDTNDQDRPVLVD-ALKSKGVVQVACGSGHTVVLSEDGAV 61
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+T+G G G LGHGD +PR VE+L+G R V+A CG +HTAAV +
Sbjct: 62 YTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTD------------ 109
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE--PNFCRVACGHSLTVALTTSGHVYT 322
G+L+TWG G G+LGHG++ P V L + ++ACG TV LT G VYT
Sbjct: 110 KGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYT 169
Query: 323 MGSPVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G G +G+ ADG LP +E +K+ + ACG +H A LT+ E++TWG+G
Sbjct: 170 WGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG-FHTAALTAAGEIFTWGEGKF 228
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
GRLGHG ++ P +VEAL K+V +ACG +AAI L+ W G
Sbjct: 229 GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGG 278
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 110/196 (56%), Gaps = 19/196 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACG 136
V IACG RH ++ G+V++WG++ G +GH D P+++++L + VA
Sbjct: 148 VTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAAC 207
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+HT A+T +G+++TWG+G FG LGHG E + VP+ V L G V ++CG +H+A
Sbjct: 208 GFHTAALTAAGEIFTWGEG--KFGRLGHGMERNQMVPRMVE-ALMGKRVGHVACGGFHSA 264
Query: 197 VVTSAG-----------QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+ +G Q++TFG+G G LGHGD + VS+P V L + V+ A
Sbjct: 265 AILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNE 324
Query: 246 HTAAVVEVMVGNSSSS 261
HTAA + G SSS+
Sbjct: 325 HTAA----LAGASSST 336
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 19/179 (10%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
LG V+ WG+ +GV+G N G + LP+ LES V +A G H A +
Sbjct: 164 LGKVYTWGDKE-NGVVGH-TNADGHQY-------LPRMLESLQAKTVTQVAACGFHTAAL 214
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GE+F+WGE GRLGHG++ + + P++++AL + VACG +H+ A+ SG+LYT
Sbjct: 215 TAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYT 274
Query: 152 WGDG----TYNF-----GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
WG G Y F G LGHG+ VP V G ++ +HV ++ HTA + A
Sbjct: 275 WGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVK-MHVVKVASYNEHTAALAGA 332
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 199/384 (51%), Gaps = 23/384 (5%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L +A G + V G+V+
Sbjct: 3891 DGSG-AIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVY 3949
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
+ G + GRLG G V+ P L++++ ++ I+ VA G H A++ G +Y+WG+G
Sbjct: 3950 ATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG- 4008
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN +++ PK + L G + I+CG H+A ++SAG L+T+G G +G LG
Sbjct: 4009 -DDGKLGHGNRITYDRPKLIEA-LLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLG 4066
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD P V +L+G + + ACG + + C + +++WGDG
Sbjct: 4067 HGDSDDQLKPTVVTALQGYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4114
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4115 DYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K V IA GS H + K EVYTWG G+LG G T + S
Sbjct: 4175 TDDHVRRPRKVSALQGKKIV-SIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQS 4233
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K + +ACG+ T A
Sbjct: 4234 PRLVHALQGKNITRVACGSAHTLA 4257
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 203/391 (51%), Gaps = 31/391 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 2924 VYVWGLNDKDQL--GGLK------GSKI--KLPVHSEVLSKLKPIHIAGGSKTLFVVSQE 2973
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G +++V PK I LS I+ VA G H A+T G +++W
Sbjct: 2974 GKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSW 3033
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN VS P+ + L+ + I+CG H+A + S G+L+T+G G +
Sbjct: 3034 GEG--EDGKLGHGNRVSLDKPRLIEA-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3090
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHGD + P+ V++L G R ++ ACG T A+ E G +++
Sbjct: 3091 GRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTE------------DGSVYS 3138
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + P V L +V CG ++ALT G V+T G Y +
Sbjct: 3139 WGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3198
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3199 LGHGNDHHVRRPTLVEGLRGKKVVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTM 3257
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L+D +V +ACG++ + A L
Sbjct: 3258 VNRKPSLVHNLEDAKVNRVACGSSHSIAWVL 3288
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 164/333 (49%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
G ++ GEGT +G LG G N VG P S ++ + GG+HA +
Sbjct: 2974 GKLYACGEGT-NGRLGLGDNNNVGE--------PKPIPFLSQYIIKKVAVHSGGKHALAL 3024
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G+VFSWGE G+LGHG + P+LI+AL + I +ACG H+ A+ +G+LYT
Sbjct: 3025 TQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYT 3084
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGD 209
WG G Y G LGHG+ +H PK V+ L G V ++CG T +T G ++++GD
Sbjct: 3085 WGLGEY--GRLGHGDTTTHLKPKLVDA-LVGQRVIQVACGSRDAQTMALTEDGSVYSWGD 3141
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G FG LG G P V+ L GL V+ CG + A+ + G+++
Sbjct: 3142 GDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKY------------GEVW 3189
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG GD RLGHG+ PT V L VA G +A+T +G VY G +G
Sbjct: 3190 TWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
Q GN + L + V +ACGS H
Sbjct: 3250 QQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSH 3282
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 169/339 (49%), Gaps = 21/339 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
+ A+ V + V+ WG +LG S + P + LS + +A G V+
Sbjct: 2912 AQRASDVQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVS 2971
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV---SSISCGPWHTAVVTSA 201
G LY G+GT LG N V PK + P ++ ++ G H +T
Sbjct: 2972 QEGKLYACGEGTNGRLGLGDNNNVGE--PKPI--PFLSQYIIKKVAVHSGGKHALALTQD 3027
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
G++F++G+G G LGHG+R S+ PR +E+LK R ACG H+AA+
Sbjct: 3028 GKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAI----------- 3076
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGH 319
S+G+L+TWG G+ GRLGHGD L P V ALV +VACG + T+ALT G
Sbjct: 3077 -ASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
VY+ G +G+LG +DG +L+ V ++ CG+ LT EV+TWGKG
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGD 3195
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG+ P+LVE L+ K+V +A G A+
Sbjct: 3196 YFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAV 3234
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 162/317 (51%), Gaps = 31/317 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR+ PK +E+ + ++ +IACGG H+A ++
Sbjct: 4000 GHVYSWGEG-DDGKLGHG-NRI--------TYDRPKLIEALLGTEIVDIACGGHHSAAIS 4049
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L P ++ AL + VACG + T VT +++
Sbjct: 4050 SAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVW 4109
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4110 SWGDGDY--GKLGRGGSDGCKVPMKIES-LAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4166
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLF 269
+ LGHG V PR+V +L+G + V A G H A CS G+++
Sbjct: 4167 DYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVA-------------CSDKGEVY 4213
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWGD D+G+LG G A+ P V AL N RVACG H+L + T + H +P+
Sbjct: 4214 TWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHSLPAATPM 4273
Query: 328 YGQLGNPQADGKLPNRV 344
L L NR+
Sbjct: 4274 EYDLVKDLPFSALHNRL 4290
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 171/335 (51%), Gaps = 38/335 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG G G P DA++ + ++ + C E ++LSG +Y
Sbjct: 434 EVLAWGNV---HFGSGS-----MPFYCDAIAEIGVKQLCCTERALLILSLSGKVY----- 480
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
++ +G+E + P+ V G + + ++S G H +T+ G ++++G+G G
Sbjct: 481 -----MMYYGSETQY--PQSVYGFADDVVQIASHPDGK-HYLALTTKGIVYSWGNGDGGR 532
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LGHGD S P+ +E L ACG ++AA+ S+G+L TWG G
Sbjct: 533 LGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAI------------SSTGELLTWGRG 580
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLG 332
GRLGHG + +PT V AL VACG S T+ +T SG V++ G YG+LG
Sbjct: 581 SYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLG 640
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+DG KLP V+ L ++ V+ + CG A LT+ EVYTWGKG + RLGHG+ +
Sbjct: 641 RGGSDGSKLPKIVDKLLDQNVVK-VFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHV 699
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P LVE L++K+V+ ++ G AI + V G
Sbjct: 700 RFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYG 734
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 179/363 (49%), Gaps = 30/363 (8%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
S+P ++ + V+ + C R +++ G+V+ + +G S+ +P+ +
Sbjct: 447 SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVY--------MMYYG--SETQYPQSVYG 496
Query: 125 LSNMNIELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
++ +++ + + H A+T G +Y+WG+G + G LGHG+ S P+ + L
Sbjct: 497 FADDVVQIASHPDGKHYLALTTKGIVYSWGNG--DGGRLGHGDSFSCDEPQVIE-VLSDR 553
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
V+ I+CG ++A ++S G+L T+G G++G LGHG +SIP V +L G ACG
Sbjct: 554 TVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACG 613
Query: 244 VWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
S + C +SG +F+WGDGD G+LG G + +P V L++ N
Sbjct: 614 ------------SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNV 661
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGS 360
+V CG + ALT G VYT G + +LG+ + + P VEG +K V +++ G+
Sbjct: 662 VKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKK-VRDLSVGN 720
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
H+ +T VY WG+ ++ + P+L L K V + CG + A +
Sbjct: 721 LHILAITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKSVIGLVCGPMQSFAWSM 780
Query: 421 HKW 423
W
Sbjct: 781 STW 783
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 143/297 (48%), Gaps = 42/297 (14%)
Query: 22 QGSGHDDGD---AL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
Q + H DG AL G V+ WG G G G LG G + SC P+ +E
Sbjct: 503 QIASHPDGKHYLALTTKGIVYSWGNGDG-GRLGHGDSF--SC-------DEPQVIEVLSD 552
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
V IACG ++A ++ GE+ +WG S GRLGHG+ D+ P ++ AL+ + VAC
Sbjct: 553 RTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVAC 612
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
G+ T VT SG +++WGDG Y G LG G +PK V+ L+ +V + CG
Sbjct: 613 GSGDSQTLCVTNSGIVFSWGDGDY--GKLGRGGSDGSKLPKIVDKLLDQ-NVVKVFCGGQ 669
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+A +T+ G+++T+G G LGHG+ + V P+ VE L+ + + G H A+ E
Sbjct: 670 FSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITED 729
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ ++ WG D ++ P+ A + EP C G S+
Sbjct: 730 QL------------VYGWGRNDACQID---------PSLGAVVSEPTLCPTLSGKSV 765
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 37/336 (11%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V +P L I ++ G VT+ G+
Sbjct: 3893 SGAIYGWGHN--HRGQLGGLEGAKVKLPLPCESLSALRPIQLAG---GEQTLFAVTADGK 3947
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++ G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 3948 VYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAV--------------NSGGKHC 3993
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G +++WG+GD G+LGHG++ P + AL+ +ACG + A++++G
Sbjct: 3994 LALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGW 4053
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGK 377
+YT G YG+LG+ +D +L V L V ++ACGS L T V++WG
Sbjct: 4054 LYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGD 4113
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSGVDQSMCS 433
G G+LG G +D P +E+L V + CG+ F+ A+ ++ W G +
Sbjct: 4114 GDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGH 4173
Query: 434 G----CRLP--FNNFKRKRHNCYNCGLVFCHSCSSK 463
G R P + + K+ G + C +CS K
Sbjct: 4174 GTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDK 4209
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACG 307
V E M +S + ++ WG DK +LG G K +K+ +P L + +A G
Sbjct: 2905 VVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSKIKLPVHSEVLSKLKPIHIAGG 2963
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAV 365
++ G +Y G G+LG + + LS+ ++++A G H
Sbjct: 2964 SKTLFVVSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALA 3023
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LH 421
LT +V++WG+G +G+LGHG+ + P L+EALK K+++ IACG+ +AAI L+
Sbjct: 3024 LTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELY 3083
Query: 422 KW 423
W
Sbjct: 3084 TW 3085
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 320 VYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY G QLG + KLP E LSK IA GS + V++ + ++Y G+G
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSE-VLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 2982
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK------WVSGVDQSMC 432
NGRLG GD ++ P + L +K +A + A+ L + W G D +
Sbjct: 2983 TNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLG 3042
Query: 433 SGCRLPFNN------FKRKRHNCYNCG 453
G R+ + K KR CG
Sbjct: 3043 HGNRVSLDKPRLIEALKSKRIRDIACG 3069
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 206/398 (51%), Gaps = 43/398 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3984 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 4030
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 4031 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4090
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 4091 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4147
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRA---------ACGVWHTAAVVEVMVGNSSSS 261
+G LG G+ + +P V +L+G + +A ACG+ HT AV
Sbjct: 4148 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV----------- 4196
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+ ++ +GDGD G+LG G+ AK P V L +VACG +VALT G VY
Sbjct: 4197 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVY 4256
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGK--LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
T G +G P+ + NR + L+ +E++A G+ H LTS ++Y WG +
Sbjct: 4257 TFGQDRL--IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNS 4314
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G+LG G T+ P+LV L+ K V+ I+ G +AA
Sbjct: 4315 EGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G +++LT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ ++ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQVSAGTSHSLA 732
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 168/337 (49%), Gaps = 33/337 (9%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3984 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 4040
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 4041 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4097
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 4098 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 4145
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALV---------EPNFCRVACGHSLTVALTTSG-HVYT 322
+GD GRLG G+ K +P V AL + C VACG + T+A++ G V+
Sbjct: 4146 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWA 4205
Query: 323 MGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G YG+LG + K P +V+ L ++++ACG+ LT +VYT+G+
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLI 4264
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L G + N P V L ++ +A G T A+
Sbjct: 4265 GLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4301
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 35/315 (11%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 4061 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 4119
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS- 186
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV LEG +
Sbjct: 4120 EEVVQMSCGFKHSAVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERVTA-LEGYQIGQ 4176
Query: 187 --------SISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
S++CG HT V++ G + + FGDG +G LG G+ + S P++V+ L G+
Sbjct: 4177 ARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGI 4236
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ ACG + A+ + G+++T+G L G P V L
Sbjct: 4237 KKVACGTQFSVALTK------------DGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLA 4284
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFV 353
VA G T+ALT++G +Y GS GQLG N + L ++GK V
Sbjct: 4285 GVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----NV 4340
Query: 354 EEIACGSYHVAVLTS 368
+I+ G H A T+
Sbjct: 4341 RQISAGRCHSAAWTA 4355
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 33/292 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 4087 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 4136
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL---------VACGEYHTCAV 143
G++F++G GRLG G S+ P+ + AL I VACG HT AV
Sbjct: 4137 SDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV 4196
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+ G + W G ++G LG GN + P++V+ L GI + ++CG + +T GQ
Sbjct: 4197 SADGSM-VWAFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGQ 4254
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++TFG L G ++ + P++V L G+ A G HT A+
Sbjct: 4255 VYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALT------------ 4302
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
S+G ++ WG +G+LG G PT V L N +++ G + A T
Sbjct: 4303 STGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 4354
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLSLTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +V+ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQVSAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 2 KAMAMDAFRVSLS---SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLGGGLNRVGSC 57
+ A++ +++ + S + S + G H + +W G GD G LG
Sbjct: 4165 RVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLG--------- 4215
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G S P+ ++ + ++ +ACG + + + K G+V+++G++ L G +
Sbjct: 4216 LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRARNHN 4275
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P+ + L+ + IE VA G HT A+T +GD+Y WG + LGH N V P V
Sbjct: 4276 RPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVRE--PTLVT 4333
Query: 178 GPLEGIHVSSISCGPWHTAVVTS 200
L+G +V IS G H+A T+
Sbjct: 4334 -VLQGKNVRQISAGRCHSAAWTA 4355
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + +S
Sbjct: 669 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQVSA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 183/335 (54%), Gaps = 21/335 (6%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG 136
Q I CG ++ G V + GE S GRLG G D+ +I AL + +LV +CG
Sbjct: 3216 QQIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCG 3275
Query: 137 -EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
+ H+ A+T SG++++WGDG Y G LGHGN P+++ L+G + ++CG H+
Sbjct: 3276 SDGHSMALTESGEVFSWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEIIQMACGFKHS 3332
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
AVV++ G+LFTFG+G +G LG G+ + IP V +L+G + CG+ HT AV
Sbjct: 3333 AVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAV----- 3387
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ ++++GDGD G+LG G+ AK P V L +V CG +VALT
Sbjct: 3388 ------SADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALT 3441
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVY 373
G V+T G +G P++ + NR + L FVE++ G+ H LTS EV+
Sbjct: 3442 KDGRVFTFGQERL--IGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVW 3499
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
WG +G+LG GDT+ R P LV AL+ K V+ +
Sbjct: 3500 AWGSNGDGQLGIGDTNARREPCLVTALQGKNVRQV 3534
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 168/353 (47%), Gaps = 44/353 (12%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 3261 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 3319
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
I +ACG H+ V+ G L+T+G+G Y G LG GN + +P+RV LEG V
Sbjct: 3320 EEIIQMACGFKHSAVVSADGKLFTFGNGDY--GRLGLGNTSNKKIPERVTA-LEGQMVGQ 3376
Query: 188 ISCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+ CG HT V++ G +++FGDG +G LG G+ + S P+ V+ L G+ + CG
Sbjct: 3377 VGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQF 3436
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGD----GDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
+ A+ + G++FT+G G + VP A VE
Sbjct: 3437 SVALTK------------DGRVFTFGQERLIGQPESRSRNHNRPQQVPALEAFFVE---- 3480
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
V G ++ALT++G V+ GS GQLG G R E L
Sbjct: 3481 DVVVGAEHSLALTSTGEVWAWGSNGDGQLGI----GDTNARREPCL-------------- 3522
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
V L K WG +G+LG GDT+ R P LV L+ K V+ I+ G N +
Sbjct: 3523 VTALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTDLQGKNVRQISAGRNHS 3575
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 135/273 (49%), Gaps = 26/273 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ ++ +ACG +H+A+V+
Sbjct: 3287 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEIIQMACGFKHSAVVS 3336
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD-LYT 151
G++F++G GRLG G S+ P+ + AL + V CG HT AV+ G+ +++
Sbjct: 3337 ADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWS 3396
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
+GDG Y G LG GN + P+RV+ PL GI V + CG + +T G++FTFG
Sbjct: 3397 FGDGDY--GKLGLGNSTAKSTPQRVD-PLCGIGVKKVCCGTQFSVALTKDGRVFTFGQER 3453
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
++ + P++V +L+ G H+ A+ S+G+++ W
Sbjct: 3454 LIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALT------------STGEVWAW 3501
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
G G+LG GD A+ P V AL N +V
Sbjct: 3502 GSNGDGQLGIGDTNARREPCLVTALQGKNVRQV 3534
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 18/240 (7%)
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR--AA 241
I CG T V+ + G + G+G++G LG G+ + + +L+G + +
Sbjct: 3214 QAQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTS 3273
Query: 242 CGV-WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG H+ A+ E SG++F+WGDGD G+LGHG+ + + P + AL
Sbjct: 3274 CGSDGHSMALTE------------SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE 3321
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACG 359
++ACG + ++ G ++T G+ YG+LG ++ K+P RV L V ++ CG
Sbjct: 3322 IIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCG 3380
Query: 360 SYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H +AV V+++G G G+LG G++ +++P V+ L VK + CGT F+ A+
Sbjct: 3381 LNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 208/413 (50%), Gaps = 39/413 (9%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H G+V WG G DG LG G D +P + +
Sbjct: 27 SAGASHSVALLEGNVLCSWGRGE-DGQLG---------HGDAEDRLVPTVISGFDAPRIT 76
Query: 80 NIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H A ++ +V+SWG GRLGHG SDV P+ + AL + I+ +ACG+
Sbjct: 77 SVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDS 136
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G +P+++ EGI V I+ G HTA V
Sbjct: 137 HCLAVTMGGEVQSWGRN--QNGQLGLGTTEDSLLPQKIQA-FEGICVKMIAAGAEHTAAV 193
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P +V ++G + V ACG HT V
Sbjct: 194 TEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITV-------- 245
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SSG L+T+G G+LGHGD E L P V AL + + +++ G T+ALT+ G
Sbjct: 246 ----SSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDG 301
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V ++ACG H T K V+ WG+
Sbjct: 302 KLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQK-VAQVACGWRHTLAYTEKKNVFAWGR 360
Query: 378 GANGRLGHGDTDDRNSPSLVEALK-----DKQVKSIACGTNFTAAICLHKWVS 425
G +G+LGHG+ DRN P +++A+ K+++S + FTA + WVS
Sbjct: 361 GTSGQLGHGEIVDRNKPLMIDAISPDGSGSKKLES-STAVPFTAKV----WVS 408
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 172/344 (50%), Gaps = 18/344 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H+ + + + SWG G+LGHG D L P +I I V CG HT
Sbjct: 26 VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85
Query: 141 CAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + +Y+WG G +FG LGHGN + P+ V L+GI + ++CG H VT
Sbjct: 86 TAYSEEEQQVYSWGWG--DFGRLGHGNSSDVFTPQPVRA-LQGIKIKQMACGDSHCLAVT 142
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG G + +P+++++ +G+ A G HTAAV E
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTE------- 195
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ + VP V+ + +ACG T+ +++SG
Sbjct: 196 -----DGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ + L P++VE L S +I+ G H LTS ++Y WG
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGWN 309
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
G++G GD+ D SP V +++V +ACG T A K
Sbjct: 310 KFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKK 353
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 250 VVEVMVGNSSSSNCSSGKLF-TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
VV V G S S G + +WG G+ G+LGHGD E +LVPT ++ P V CG
Sbjct: 23 VVLVSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGA 82
Query: 309 SLTVALTTS-GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
T A + VY+ G +G+LG+ + + L ++++ACG H +T
Sbjct: 83 DHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVT 142
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
EV +WG+ NG+LG G T+D P ++A + VK IA G TAA+
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAV 193
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 204/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 2792 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSEVLSKLKPVHIAGGSKTLFVVSQE 2841
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G DS+V PK I LS I+ VA G H A+T G +++W
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN +S P+ + L+ + I+CG H+A +TS+G+L+T+G G +
Sbjct: 2902 GEG--EDGKLGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 2958
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + S P+ V+SL G R ++ ACG + + + G +++WG
Sbjct: 2959 GRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTM----------ALTADGLVYSWG 3008
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P + L ++ CG ++ALT G V+T G Y +LG
Sbjct: 3009 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3068
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3069 HGNDHHVRKPTLVEGLRGKKII-HVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVN 3127
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L D +V ++CG++ + A L
Sbjct: 3128 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3156
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 201/390 (51%), Gaps = 23/390 (5%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVN 92
D + +G+G + G G N G G++ LP ES L + G + V
Sbjct: 3775 DWMLSWDGSG-AIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT 3833
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G+V++ G + GRLG G V+ P L++++ ++ ++ VA G H A++ G +Y
Sbjct: 3834 ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 3893
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G + G LGHGN +S+ PK + L G + I+CG H+A +TSAG L+T+G G
Sbjct: 3894 SWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTWGKG 3950
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KL 268
+G LGHGD + P+ +E+L+ + + ACG + + C + +
Sbjct: 3951 RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG------------SGDAQTLCVTDDDNV 3998
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + +P + +L +V CG +VALT SG +YT G Y
Sbjct: 3999 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDY 4058
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V K + IA GS H T K EV+TWG G+LG G
Sbjct: 4059 HRLGHGTDDHVRRPRKVAALQGKKII-SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGT 4117
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T P LV AL+ K++ +ACG+ T A
Sbjct: 4118 TSALQRPRLVHALQGKKITRVACGSAHTLA 4147
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 151/286 (52%), Gaps = 27/286 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR + PK +E + ++ +IACGG H+A +
Sbjct: 3890 GHVYSWGEG-DDGKLGHG-NR--------LSYDRPKLIEELLGTEIVDIACGGHHSAAIT 3939
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PKLI+AL + + VACG + T VT +++
Sbjct: 3940 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVW 3999
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4000 SWGDGDY--GKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4056
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V +L+G + + A G H A + G++FT
Sbjct: 4057 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEVFT 4104
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
WGD D+G+LG G A P V AL RVACG + T+A +T
Sbjct: 4105 WGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4150
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 166/333 (49%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG G + C P S V+ + GG+HA +
Sbjct: 2842 GKLYACGEGT-NGRLGLG-DDSNVC------EPKPIPFLSQYVIKKVAVHSGGKHALALT 2893
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G+VFSWGE G+LGHG + P+LI++L + I +ACG H+ A+T SG+LYTW
Sbjct: 2894 QDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTW 2953
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V I+CG T +T+ G ++++GDG
Sbjct: 2954 GLGEY--GRLGHGDTATQSKPKLVQS-LVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G P ++ L GL V+ CG + A+ + G+++T
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY------------GEVWT 3058
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG+ PT V L VA G +A+T G VY G +GQ
Sbjct: 3059 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQ 3118
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GN K P+ V +L + V ++CGS H
Sbjct: 3119 QGNGTTIVNKKPSLVH-ELDDARVNRVSCGSSH 3150
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 141/288 (48%), Gaps = 17/288 (5%)
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H A+T +Y+WG+G G LGHGN + PK + +E +++ I+CG ++A +
Sbjct: 513 HYLALTQDNSVYSWGNG--ECGRLGHGNMTWYDEPKLIEALVEK-NITFIACGSTYSAAL 569
Query: 199 TSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+S G+L+T+G G +G LGHG+ K V IP V +L G V ACG G
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGG-----------GR 618
Query: 258 SSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ C +SG +F+WGDG+ G+LG G + P V L++ N +V CG + ALT
Sbjct: 619 DPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALT 678
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G +LG+ D ++ L ++++ G HV LT VY W
Sbjct: 679 AYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGW 738
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
G+ +G++ P+L K V +ACG + A C W
Sbjct: 739 GRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAAW 786
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 157/314 (50%), Gaps = 34/314 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P D +S + I+ + C E ++++G++Y ++ +G+E +RV G
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVY----------MMYYGSET-----QRVYG 496
Query: 179 PLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
E ++S S G H +T ++++G+G G LGHG+ P+ +E+L
Sbjct: 497 FSEKPITMIASHSDGT-HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKN 555
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK-LVPTCVAA 295
ACG ++AA+ S+G+L+TWG G+ G+LGHG+ + ++PT V A
Sbjct: 556 ITFIACGSTYSAAL------------SSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTA 603
Query: 296 LVEPNFCRVACG---HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
L VACG T+ +T SG V++ G +G+LG DG ++ KL
Sbjct: 604 LNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDIN 663
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
V ++ CG A LT+ EVYTWGKG + +LGHG+ D P +++ LK K++K + G
Sbjct: 664 VAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGH 723
Query: 413 NFTAAICLHKWVSG 426
A+ + V G
Sbjct: 724 LHVLALTEDQLVYG 737
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 19/251 (7%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G H + + V+SWG GRLGHG + PKLI+AL NI +ACG ++ A++
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALS 570
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG----PWHTAVVTS 200
+G+LYTWG G N+G LGHGN + + L G V ++CG P T VT+
Sbjct: 571 SNGELYTWGRG--NYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP-QTLCVTA 627
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G +F++GDG G LG G P+ V+ L + + CG +AA+
Sbjct: 628 SGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALT--------- 678
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+ G+++TWG G+ +LGHG+++ P + L + GH +ALT V
Sbjct: 679 ---AYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLV 735
Query: 321 YTMGSPVYGQL 331
Y G +GQ+
Sbjct: 736 YGWGRNDHGQI 746
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 129/256 (50%), Gaps = 19/256 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
PK +E+ V ++ IACG ++A ++ GE+++WG + G+LGHG D DV+ P L+ AL
Sbjct: 545 PKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTAL 604
Query: 126 SNMNIELVACG---EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ + VACG + T VT SG +++WGDG N G LG G PK V+ L+
Sbjct: 605 NGHMVVYVACGGGRDPQTLCVTASGIVFSWGDG--NHGKLGRGGCDGSKTPKIVDKLLD- 661
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
I+V+ + CG +A +T+ G+++T+G G LGHG+ V P+ ++ LK +
Sbjct: 662 INVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYI 721
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G H A+ E + ++ WG D G++ PT N
Sbjct: 722 GHLHVLALTEDQL------------VYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVI 769
Query: 303 RVACGHSLTVALTTSG 318
+ACG + + A T+
Sbjct: 770 GLACGPTQSFAWCTAA 785
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P ESL LR V+ G AV
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 3833
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK++ G G GRLG G ++ +VPT + ++ +VA G +AL++ G
Sbjct: 3834 ---ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 3890
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
HVY+ G G+LG+ + P +E L V+ IACG +H A +TS +YTWGK
Sbjct: 3891 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 3949
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD++D+ +P L+EAL+D +V +ACG+ +C+
Sbjct: 3950 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCV 3992
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG G E + + L + ++ G VT+ G+++
Sbjct: 3783 SGAIYGWGHN--HRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVY 3839
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAV--------------NSGGKHCLA 3885
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G +++WG+GD G+LGHG++ + P + L+ +ACG + A+T++G +Y
Sbjct: 3886 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 3945
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS L T V++WG G
Sbjct: 3946 TWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4005
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +E+L V + CG+ F+ A+
Sbjct: 4006 YGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4044
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 23 GSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
GSGH + G+++ WG G R+G G S PK ++S V V I
Sbjct: 2937 GSGHSAAITSSGELYTWGLGE--------YGRLG--HGDTATQSKPKLVQSLVGQRVIQI 2986
Query: 82 ACGGRHAAL--VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
ACG R A + G V+SWG+ G+LG G P LID L+ + + + CG
Sbjct: 2987 ACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3046
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+ A+T G+++TWG G Y LGHGN+ P V G L G + ++ G H VT
Sbjct: 3047 SLALTKYGEVWTWGKGDY--FRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVT 3103
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
GQ++ +GD G G+G P V L R R +CG H+ A V
Sbjct: 3104 DIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWV 3155
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P H+AV + +G LG + +P E L L+ V A G T VV
Sbjct: 2787 PQHSAV-------YVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGS-KTLFVV 2838
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHS 309
GKL+ G+G GRLG GD P + L + +VA G
Sbjct: 2839 S-----------QEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGK 2887
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+ALT G V++ G G+LG+ + R+ L + +IACGS H A +TS
Sbjct: 2888 HALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSS 2947
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
E+YTWG G GRLGHGDT ++ P LV++L ++V IACG+ + L
Sbjct: 2948 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMAL 2998
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G VF WG+G G L R G C G S PK ++ + ++V + CG + +A
Sbjct: 627 ASGIVFSWGDGNH-----GKLGR-GGCDG----SKTPKIVDKLLDINVAKVYCGQQFSAA 676
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ GEV++WG+ +LGHG + V +PK+ID L I+ + G H A+T +Y
Sbjct: 677 LTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVY 736
Query: 151 TWGDGTYNFGLLGHGN---EVSHWVPKRVNGP-LEGIHVSSISCGP-----WHTAVVTSA 201
WG HG + VP+ P G +V ++CGP W TA + A
Sbjct: 737 GWGRN-------DHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAAWSVA 789
Query: 202 GQL 204
++
Sbjct: 790 NRV 792
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G + G + V P +E + ++A G H V
Sbjct: 3054 GEVWTWGKGDYFRLGHGNDHHVRK----------PTLVEGLRGKKIIHVAVGALHCLAVT 3103
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
G+V++WG+ G+ G+G P L+ L + + V+CG H+ A L+
Sbjct: 3104 DIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3157
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2713 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 2822
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 2823 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 2879
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2880 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2929
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2930 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2989
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2990 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3048
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3049 NRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3704 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKL 3760
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3761 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3820
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V I+ G H+A +T+AG L+T+G G +G L
Sbjct: 3821 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 3877
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 3878 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 3925
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3926 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3985
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3986 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4044
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4045 RPRLVAALQGKKINRVACGSAHTLA 4069
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL + VV V + GGRHA +
Sbjct: 2763 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 2815
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++FSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 2816 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 2875
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 2876 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 2933 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2980
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 2981 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3040
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3041 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3078
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 3812 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDIAAGGAHSACIT 3861
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 3862 AAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 3921
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3922 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3978
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3979 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4026
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4027 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4073
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4074 --KPANAGKLPTQV 4085
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 175/356 (49%), Gaps = 42/356 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2696 IRKKASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2753
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHV 185
AVT+ G +Y G+ T G LG G +S++V K+V
Sbjct: 2754 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITALSNYVVKKV--------- 2802
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++ G H +T G++F++G+G G LGH R + PR +E+LK R ACG
Sbjct: 2803 -AVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 2861
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+AA+ SSG+L+TWG G+ GRLGHGD +L P V L+ +VA
Sbjct: 2862 HSAAIT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVA 2909
Query: 306 CG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYH 362
CG + T+ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+
Sbjct: 2910 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQF 2968
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 2969 SLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 123/242 (50%), Gaps = 22/242 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG G + D PK +E+ V +IACG A
Sbjct: 3862 AAGDLYTWGKGRY-GRLGHGDSE---------DQLKPKLVEALQGYRVIDIACGSGDAQT 3911
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3912 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3971
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 3972 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4028
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S ++GKL
Sbjct: 4029 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-------STSKPANAGKL 4081
Query: 269 FT 270
T
Sbjct: 4082 PT 4083
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2818 GKIFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 2867
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2868 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2927
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2928 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2987
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 2988 RLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3046
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3085
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L I + G VT+ G+
Sbjct: 3705 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALAALRPIQLIG---GEQTLFAVTADGK 3759
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3760 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3805
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L +A G + + +T +G
Sbjct: 3806 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 3865
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 3866 LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 3925
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 3926 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3966
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR ++ G AV
Sbjct: 3705 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVT--------- 3755
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3756 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ ++YTWGKG
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 3872
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 3873 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 3914
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K+F WG DK +LG G K +K+ VP+ L N +VA G A+T G VY G
Sbjct: 2712 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 2770
Query: 326 PVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG + G +P R LS V+++A G H LT ++++WG+G +G+
Sbjct: 2771 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGK 2830
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
LGH + + P L+EALK K+++ IACG++ +AAI L+ W
Sbjct: 2831 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 2875
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 2760
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 2761 -VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 2819
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 2820 IFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 2878
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2879 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2920
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 66/141 (46%), Gaps = 27/141 (19%)
Query: 318 GHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V++ G YG+LG +DG K P +E KL V ++ CGS LT +VY+WG
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWG 467
Query: 377 KGANGRLGHGDTDDRNSPSLVEALK------------------DKQVKSIACGTNFTAAI 418
KG N RLGHG + P L+E L+ K + IACG + A
Sbjct: 468 KGDNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFA- 526
Query: 419 CLHKWVSGVDQSMCSGCRLPF 439
W S + S+ G R+PF
Sbjct: 527 ----WSSCSEWSI--GLRVPF 541
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 19/115 (16%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+V+SWG+ G+LG G PKLI+ L ++++ V CG + A+T G +Y+WG
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNG-----------------PLEGIHVSSISCGP 192
G + LGHG E PK + G L+ H+ I+CGP
Sbjct: 469 G--DNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGP 521
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 50/202 (24%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ I +AC E ++ +G +Y
Sbjct: 339 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQA-- 391
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA-GQLFTFGDGTFGV 214
YN + L G+ AV + GQ++++GDG +G
Sbjct: 392 -YN------------------SDTLVGV-----------VAVFSLIFGQVWSWGDGDYGK 421
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG G P+ +E L+ L V+ CG + A+ + G++++WG G
Sbjct: 422 LGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK------------DGQVYSWGKG 469
Query: 275 DKGRLGHGDKEAKLVPTCVAAL 296
D RLGHG +E P + L
Sbjct: 470 DNQRLGHGTEEHVRYPKLLEGL 491
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACG------------VWHTAAVVEVMVGNSS 259
+G++G +V P + E L L + AC V+ A + +VG +
Sbjct: 343 WGLIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA 402
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+ G++++WGDGD G+LG G + P + L + + +V CG +VALT G
Sbjct: 403 VFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQ 462
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEG 346
VY+ G +LG+ + + P +EG
Sbjct: 463 VYSWGKGDNQRLGHGTEEHVRYPKLLEG 490
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
G V+ WG+G G L R GS G K PK +E LDV + CG + + +
Sbjct: 408 FGQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLIEKLQDLDVVKVRCGSQFSVAL 457
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
K G+V+SWG+ RLGHG + V +PKL++ L
Sbjct: 458 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 201/390 (51%), Gaps = 23/390 (5%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVN 92
D + +G+G + G G N G G++ LP ES L + G + V
Sbjct: 3944 DWMLSWDGSG-AIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT 4002
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G+V++ G + GRLG G V+ P L++++ ++ ++ VA G H A++ G +Y
Sbjct: 4003 ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVY 4062
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G + G LGHGN +S+ PK + L G + I+CG H+A +TSAG L+T+G G
Sbjct: 4063 SWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYTWGKG 4119
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KL 268
+G LGHGD + P+ +E+L+ + + ACG + + C + +
Sbjct: 4120 RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG------------SGDAQTLCVTDDDNV 4167
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + +P + +L +V CG +VALT SG +YT G Y
Sbjct: 4168 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDY 4227
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V K + IA GS H T K EV+TWG G+LG G
Sbjct: 4228 HRLGHGTDDHVRRPRKVAALQGKKII-SIATGSLHCVACTDKGEVFTWGDNDEGQLGDGT 4286
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T P LV AL+ K++ +ACG+ T A
Sbjct: 4287 TSALQRPRLVHALQGKKITRVACGSAHTLA 4316
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 204/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 2936 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSEVLSKLKPVHIAGGSKTLFVVSQE 2985
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G DS+V PK I LS I+ V+ G H A+T G +++W
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN +S P+ + L+ + I+CG H+A +TS+G+L+T+G G +
Sbjct: 3046 GEG--EDGKLGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3102
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + S P+ V+SL G R ++ ACG + + + G +++WG
Sbjct: 3103 GRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTM----------ALTADGLVYSWG 3152
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P + L ++ CG ++ALT G V+T G Y +LG
Sbjct: 3153 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3212
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3213 HGNDHHVRKPTLVEGLRGKKVI-HVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVN 3271
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L D +V ++CG++ + A L
Sbjct: 3272 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3300
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 151/286 (52%), Gaps = 27/286 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR + PK +E + ++ +IACGG H+A +
Sbjct: 4059 GHVYSWGEG-DDGKLGHG-NR--------LSYDRPKLIEELLGTEIVDIACGGHHSAAIT 4108
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PKLI+AL + + VACG + T VT +++
Sbjct: 4109 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4168
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4169 SWGDGDY--GKLGRGGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGAIYTWGKG 4225
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V +L+G + + A G H A + G++FT
Sbjct: 4226 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTD------------KGEVFT 4273
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
WGD D+G+LG G A P V AL RVACG + T+A +T
Sbjct: 4274 WGDNDEGQLGDGTTSALQRPRLVHALQGKKITRVACGSAHTLAWST 4319
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 167/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG G + C P S V+ ++ GG+HA +
Sbjct: 2986 GKLYACGEGT-NGRLGLG-DDSNVC------EPKPIPFLSQYVIKKVSVHSGGKHALALT 3037
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G+VFSWGE G+LGHG + P+LI++L + I +ACG H+ A+T SG+LYTW
Sbjct: 3038 QDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTW 3097
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G + I+CG T +T+ G ++++GDG
Sbjct: 3098 GLGEY--GRLGHGDTATQSKPKLVQS-LVGQRIIQIACGSRDAQTMALTADGLVYSWGDG 3154
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G P ++ L GL V+ CG + A+ + G+++T
Sbjct: 3155 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY------------GEVWT 3202
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG+ PT V L VA G +A+T G VY G +GQ
Sbjct: 3203 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQ 3262
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GN K P+ V +L + V ++CGS H
Sbjct: 3263 QGNGTTIVNKKPSLVH-ELDDARVNRVSCGSSH 3294
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 171/335 (51%), Gaps = 37/335 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG +LG+G P D ++ + I+ + C E ++++G++Y
Sbjct: 437 EVIAWG---SVKLGNGSS-----PFYYDTIAELGIKQLCCTERALMILSVNGNVY----- 483
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
++ +G+E + P+RV G E I ++S S G H +T ++++G+G G
Sbjct: 484 -----MMYYGSETQY--PQRVYGFSEKPIIMIASHSDGT-HYLALTQDNSVYSWGNGDGG 535
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGDR P+ +E+L ACG ++AA+ S+G+L+TWG
Sbjct: 536 RLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAAL------------SSNGELYTWGR 583
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHG+ + ++PT V AL VACG S T+ +T SG V++ G YG+L
Sbjct: 584 GNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKL 643
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G DG ++ KL V ++ CG A LT+ EVYTWGKG RLGHG+ D
Sbjct: 644 GRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHV 703
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P +++ LK K+VK + G A+ + + G
Sbjct: 704 RYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYG 738
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 172/361 (47%), Gaps = 29/361 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ L ++ + C R +++ G V+ + +G S+ +P+ + S
Sbjct: 452 PFYYDTIAELGIKQLCCTERALMILSVNGNVY--------MMYYG--SETQYPQRVYGFS 501
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I ++A H A+T +Y+WG+G + G LGHG+ + PK + +E +
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNG--DGGRLGHGDRAWYDEPKLIEALVEK-N 558
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
++ I+CG ++A ++S G+L+T+G G +G LGHG+ +V IP V +L G V ACG
Sbjct: 559 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACG- 617
Query: 245 WHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
S + C +SG +F+WGDG+ G+LG G + P V L++ N
Sbjct: 618 -----------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+V CG + ALT G VYT G +LG+ D ++ L V+E+ G+ H
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLH 726
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
V LT +Y WG+ G++ P+L L K V +ACG + A C
Sbjct: 727 VLALTEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWCTSA 786
Query: 423 W 423
W
Sbjct: 787 W 787
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 118/223 (52%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P ESL LR V+ G AV
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 4002
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK++ G G GRLG G ++ +VPT + ++ +VA G +AL++ G
Sbjct: 4003 ---ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4059
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
HVY+ G G+LG+ + P +E L V+ IACG +H A +TS +YTWGK
Sbjct: 4060 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGK 4118
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD++D+ +P L+EAL+D +V +ACG+ +C+
Sbjct: 4119 GRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCV 4161
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 27/291 (9%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG G E + + L + ++ G VT+ G+++
Sbjct: 3952 SGAIYGWGHN--HRGQLG-GLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVY 4008
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAV--------------NSGGKHCLA 4054
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G +++WG+GD G+LGHG++ + P + L+ +ACG + A+T++G +Y
Sbjct: 4055 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLY 4114
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS L T V++WG G
Sbjct: 4115 TWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4174
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSG 426
G+LG G +D P +E+L V + CG+ F+ A+ ++ W G
Sbjct: 4175 YGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKG 4225
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 23 GSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
GSGH + G+++ WG G R+G G S PK ++S V + I
Sbjct: 3081 GSGHSAAITSSGELYTWGLGE--------YGRLG--HGDTATQSKPKLVQSLVGQRIIQI 3130
Query: 82 ACGGRHAAL--VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
ACG R A + G V+SWG+ G+LG G P LID L+ + + + CG
Sbjct: 3131 ACGSRDAQTMALTADGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3190
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+ A+T G+++TWG G Y LGHGN+ P V G L G V ++ G H VT
Sbjct: 3191 SLALTKYGEVWTWGKGDY--FRLGHGNDHHVRKPTLVEG-LRGKKVIHVAVGALHCLAVT 3247
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
GQ++ +GD G G+G P V L R R +CG H+ A V
Sbjct: 3248 DIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWV 3299
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P H+AV + +G LG + +P E L L+ V A G T VV
Sbjct: 2931 PQHSAV-------YVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGS-KTLFVV 2982
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHS 309
GKL+ G+G GRLG GD P + L + +V+ G
Sbjct: 2983 S-----------QEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGK 3031
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+ALT G V++ G G+LG+ + R+ L + +IACGS H A +TS
Sbjct: 3032 HALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSS 3091
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
E+YTWG G GRLGHGDT ++ P LV++L +++ IACG+ + L
Sbjct: 3092 GELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMAL 3142
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G + G + V P +E V ++A G H V
Sbjct: 3198 GEVWTWGKGDYFRLGHGNDHHVRK----------PTLVEGLRGKKVIHVAVGALHCLAVT 3247
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
G+V++WG+ G+ G+G P L+ L + + V+CG H+ A L+
Sbjct: 3248 DIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3301
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 10/112 (8%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WG+G + G + V PK ++ V+ + G H
Sbjct: 680 AYGEVYTWGKGEAYRLGHGNEDHV----------RYPKIIDILKTKKVKELCVGNLHVLA 729
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA 142
+ + ++ WG G++ + + V P L LS N+ +ACG + A
Sbjct: 730 LTEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
rubripes]
Length = 3883
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 196/391 (50%), Gaps = 38/391 (9%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G R G G + ++P S + Q + CG + L+
Sbjct: 3021 DVYLWGNG-----------RYGQLAGTGTNLTVPTLAPS--LSQTQQVVCGQNCSFLIQS 3067
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE GRLG G D+ P +I A + +LV +CG + H+ A+T +G+++
Sbjct: 3068 NGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF 3127
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LGHGN PK++ L+G V ++CG H+AVVT+ G+LFTFG G
Sbjct: 3128 SWGDG--DFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG + +P V +L+G + +CG+ HT + + ++
Sbjct: 3185 ESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVL-----------SLDGMAVWA 3233
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G AK P V L +V CG +V + GHVYT G
Sbjct: 3234 FGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERL-- 3291
Query: 331 LGNPQADGKLPNR----VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+G P D L NR V L F+E+IA G HV L+S +VY WG + G+LG G
Sbjct: 3292 IGLP--DSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLG 3349
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+L+ AL+ K +K I+ G ++A
Sbjct: 3350 HCNPVKEPTLITALQGKNIKQISAGRCHSSA 3380
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 208/445 (46%), Gaps = 38/445 (8%)
Query: 18 SSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD 77
SS+ S +GDA+ V++WG + + G L ++ LPK + D
Sbjct: 367 SSTDAASPGTEGDAV-TVYVWGSNSSHQLAEGTLEKI----------LLPKLTQG--FSD 413
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG- 136
Q I G V+ G V + G+ S GRLG G ++ PK + + NI+ V+
Sbjct: 414 AQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSK 473
Query: 137 --EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
+ HT A+T+ G++++WGDG Y G LGHGN + PK + GPL V S S G H
Sbjct: 474 GSDGHTLAITVDGEVFSWGDGEY--GKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRH 531
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+A VT G+L+T+G+G FG LGH D +S ++P V+ + G+ V ACG HT AV +
Sbjct: 532 SAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISGVGQV--ACGSSHTIAVAQ-- 587
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
++++G GD G+LGHGD P + AL +V G ++AL
Sbjct: 588 ---------DGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLAL 638
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
T++G V+ G G+ + P VE LS + + +I+CG H L+ + EVY
Sbjct: 639 TSAGQVFAWGCGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYA 697
Query: 375 WGKGANGRLGHGDTDDR-NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
WG G+ G G T P V L+ ++ I GT+ + A W +
Sbjct: 698 WGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA-----WTAVPTDRQLV 752
Query: 434 GCRLPFNNFKRKRHNCYNCGLVFCH 458
PF + Y C + C+
Sbjct: 753 AWHRPFCVDLEESTFTYLCNFLKCY 777
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 25/332 (7%)
Query: 6 MDAFRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
+ AF+ + + + +S GH G+VF WG+G G LG G N
Sbjct: 3096 ISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF-GKLGHGNNE---------RQ 3145
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
PK +E+ DV +ACG RH+A+V G++F++G GRLG S+ + P+ + A
Sbjct: 3146 RRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMLPERVAA 3205
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L ++ V+CG HT ++L G + W G ++G LG G+ + + P++V L
Sbjct: 3206 LEGYHVGQVSCGLNHTLVLSLDG-MAVWAFGDGDYGKLGAGSSTAKYYPQKVEQ-LCNKG 3263
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ + CG + VV G ++TFG L K+ S P+ V SL+GL A G
Sbjct: 3264 MKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGC 3323
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H A+ S+G ++ WG +G+LG G PT + AL N ++
Sbjct: 3324 EHVLAL------------SSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITALQGKNIKQI 3371
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
+ G + A TT G P QLG PQ+
Sbjct: 3372 SAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQS 3403
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 135/276 (48%), Gaps = 24/276 (8%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
D+Y WG+G Y L G G ++ VP + + CG + ++ S G +
Sbjct: 3021 DVYLWGNGRYG-QLAGTGTNLT--VPTLAPSLSQ---TQQVVCGQNCSFLIQSNGVVTAV 3074
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVR--AACGV-WHTAAVVEVMVGNSSSSNCS 264
G+G +G LG G+ + +P + + +G + +CG H+ A+ E
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTE------------ 3122
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+G++F+WGDGD G+LGHG+ E + P + AL + ++ACG + +T G ++T G
Sbjct: 3123 TGEVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFG 3182
Query: 325 SPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWGKGANGR 382
S G+LG K LP RV L V +++CG H VL+ V+ +G G G+
Sbjct: 3183 SGESGRLGQRSTSNKMLPERV-AALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3241
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG G + + P VE L +K +K + CG F+ +
Sbjct: 3242 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVV 3277
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 113/223 (50%), Gaps = 24/223 (10%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++ +G+G +G L G ++++P SL +T + CG N S
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLS--QTQQVVCG------------QNCSFLIQ 3066
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC-----GHSLTVALTTSG 318
S+G + G+G GRLG G+ + VPT ++A ++ GHS+ ALT +G
Sbjct: 3067 SNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSM--ALTETG 3124
Query: 319 HVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
V++ G +G+LG+ + + P ++E L V ++ACG H AV+T+ +++T+G
Sbjct: 3125 EVFSWGDGDFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFGS 3183
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G +GRLG T ++ P V AL+ V ++CG N T + L
Sbjct: 3184 GESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSL 3226
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2941 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2990
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3051 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3107
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3108 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3157
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3158 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3217
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3218 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3276
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3277 NRKPTLVQGLEGQKITRVACGSSHSVA 3303
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3931 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3987
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3988 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4047
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V I+ G H+A +T+AG LFT+G G +G L
Sbjct: 4048 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4104
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4105 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4152
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4153 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4212
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4213 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4271
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4272 RPRLVAALQGKKINRVACGSAHTLA 4296
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL + VV V + GGRHA +
Sbjct: 2991 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 3043
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++FSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3044 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3103
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3104 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3160
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3161 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3208
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3209 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3268
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3269 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3306
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4039 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDIAAGGAHSACIT 4088
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++F+WG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 4089 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4148
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4149 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4205
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4206 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4253
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4254 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4300
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4301 --KPANAGKLPTQV 4312
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 175/356 (49%), Gaps = 42/356 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2924 VRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2981
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHV 185
AVT+ G +Y G+ T G LG G +S++V K+V
Sbjct: 2982 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITALSNYVVKKV--------- 3030
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++ G H +T G++F++G+G G LGH R + PR +E+LK R ACG
Sbjct: 3031 -AVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3089
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+AA+ SSG+L+TWG G+ GRLGHGD +L P V L+ +VA
Sbjct: 3090 HSAAIT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVA 3137
Query: 306 CG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYH 362
CG + T+ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+
Sbjct: 3138 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQF 3196
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3197 SLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3252
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG +G ++V P + L+++ + +AC E ++ +G +YT
Sbjct: 401 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYT---Q 452
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V L ++ I+ H +++ G++F++G G G
Sbjct: 453 AYNSDTLG---------PQLVQS-LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGG 502
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 503 RLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 550
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 551 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 610
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 611 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 669
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E LK K+V +A G+ A+ +H W
Sbjct: 670 TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 710
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 31/303 (10%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES---- 72
+++ S G + A G+VF WG G G R+G V ++ PK + +
Sbjct: 475 IAAHSDGHHYLALSANGEVFSWGCGDG--------GRLGHGDTVPLEE--PKLISALSGK 524
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL 132
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 525 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVID 584
Query: 133 VAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
V+C G+ T AVT +G +++WGDG Y G LG G PK + L+ + + + C
Sbjct: 585 VSCGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDIVKVRC 641
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G + +T GQ++T+G G LGHG + V P+ +E LKG + + A G H A+
Sbjct: 642 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 701
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 702 TE------------DSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQ 749
Query: 311 TVA 313
+ A
Sbjct: 750 SFA 752
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 123/242 (50%), Gaps = 22/242 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD+F WG+G G LG G + D PK +E+ V +IACG A
Sbjct: 4089 AAGDLFTWGKGRY-GRLGHGDSE---------DQLKPKLVEALQGYRVIDIACGSGDAQT 4138
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4139 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4198
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4199 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4255
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S ++GKL
Sbjct: 4256 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-------STSKPANAGKL 4308
Query: 269 FT 270
T
Sbjct: 4309 PT 4310
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3046 GKIFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3095
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3096 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3155
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3156 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3215
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3216 RLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3274
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3275 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3313
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3932 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3986
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3987 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4032
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L +A G + + +T +G
Sbjct: 4033 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 4092
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
++T G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4093 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4152
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4153 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4193
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3932 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3982
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3983 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4039
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ +++TWGKG
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4099
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4100 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4141
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRV 304
+T ++V S+ K+F WG DK +LG G K +K+ VP+ L N +V
Sbjct: 2919 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 2977
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSY 361
A G A+T G VY G G+LG + G +P R LS V+++A G
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3037
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H LT ++++WG+G +G+LGH + + P L+EALK K+++ IACG++ +AAI
Sbjct: 3038 HAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3097
Query: 420 --LHKW 423
L+ W
Sbjct: 3098 GELYTW 3103
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2940 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 2988
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 2989 -VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3047
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3048 IFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3106
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3107 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3148
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2965 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3181
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 197/385 (51%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3955 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4011
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4071
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V I+ G H+A +T+AG LFT+G G +G L
Sbjct: 4072 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4176
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L + +V CG +VALT SG VYT G Y +LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4237 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL + VV V + GGRHA +
Sbjct: 3015 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 3067
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++FSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3068 VDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3232
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3292
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3293 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 158/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4063 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++F+WG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 4113 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L + V + CG + +T +G ++T+G G
Sbjct: 4173 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4324
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4325 --KPANAGKLPTQV 4336
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 175/356 (49%), Gaps = 42/356 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2948 VRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHV 185
AVT+ G +Y G+ T G LG G +S++V K+V
Sbjct: 3006 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITALSNYVVKKV--------- 3054
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++ G H +T G++F++G+G G LGH R + PR +E+LK R ACG
Sbjct: 3055 -AVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 3113
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+AA+ SSG+L+TWG G+ GRLGHGD +L P V L+ +VA
Sbjct: 3114 HSAAIT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVA 3161
Query: 306 CG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYH 362
CG + T+ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQF 3220
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3221 SLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG +G ++V P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V L ++ I+ H +++ G++F++G G G
Sbjct: 477 AYNSDTLG---------PQLVQS-LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E LK K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 31/303 (10%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES---- 72
+++ S G + A G+VF WG G G R+G V ++ PK + +
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDG--------GRLGHGDTVPLEE--PKLISALSGK 548
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL 132
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 549 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVID 608
Query: 133 VAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
V+C G+ T AVT +G +++WGDG Y G LG G PK + L+ + + + C
Sbjct: 609 VSCGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDIVKVRC 665
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G + +T GQ++T+G G LGHG + V P+ +E LKG + + A G H A+
Sbjct: 666 GSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLAL 725
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 726 TE------------DSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQ 773
Query: 311 TVA 313
+ A
Sbjct: 774 SFA 776
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 124/242 (51%), Gaps = 22/242 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD+F WG+G G LG G + D PK +E+ V +IACG A
Sbjct: 4113 AAGDLFTWGKGRY-GRLGHGDSE---------DQLKPKLVEALQGYRVIDIACGSGDAQT 4162
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+++ + V CG + A+T SG
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGA 4222
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4223 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S ++GKL
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-------STSKPANAGKL 4332
Query: 269 FT 270
T
Sbjct: 4333 PT 4334
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3070 GKIFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3240 RLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3298
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3337
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4056
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L +A G + + +T +G
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
++T G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L D V + CG+ F+ A+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVAL 4217
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRV 304
+T ++V S+ K+F WG DK +LG G K +K+ VP+ L N +V
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 3001
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSY 361
A G A+T G VY G G+LG + G +P R LS V+++A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H LT ++++WG+G +G+LGH + + P L+EALK K+++ IACG++ +AAI
Sbjct: 3062 HAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121
Query: 420 --LHKW 423
L+ W
Sbjct: 3122 GELYTW 3127
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3013
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 3014 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3071
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3072 IFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3130
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2965 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3181
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 195/386 (50%), Gaps = 26/386 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3955 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4011
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4071
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A +T+AG LFT+G G +G L
Sbjct: 4072 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4176
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS-PVYGQLG 332
GD G+LG G + VP + +L +V CG +VALT SG VYT Y +LG
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLG 4236
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4237 HGSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI 4295
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4296 QRPRLVAALQGKKINRVACGSAHTLA 4321
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL + VV V + GGRHA +
Sbjct: 3015 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 3067
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3232
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3292
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3293 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2948 VRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3006 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--- 3119
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3120 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 158/317 (49%), Gaps = 47/317 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A +
Sbjct: 4063 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACIT 4112
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++F+WG+ GRLGHG D L PKL++AL + +AC G+ T +T ++
Sbjct: 4113 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT---F 207
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T F
Sbjct: 4173 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWQVF 4229
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
D + LGHG V PR+V+ L+G + + A G H E G+
Sbjct: 4230 RD--YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGE 4275
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4276 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS---------- 4325
Query: 328 YGQLGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4326 -----KPANAGKLPTQV 4337
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG +G ++V P + L+N+ + VAC E ++ +G +YT
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V L ++ I+ H +++ G++F++G G G
Sbjct: 477 AYNSDTLG---------PQLVQS-LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E LK K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 23/299 (7%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL 76
+++ S G + A G+VF WG G G G LG G KM S+L V+
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDG-GRLGHG--DTVPLEEPKMISALSGKQAGKHVV 555
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC- 135
+IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V+C
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ T AVT +G +++WGDG Y G LG G PK + L+ + + + CG
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQF 669
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ +T GQ++T+G G LGHG + V P+ +E LKG + + A G H A+ E
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE-- 727
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
++ +WG D+ + + K P + L + +ACG + + A
Sbjct: 728 ----------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3070 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3240 RLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3298
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V +
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPA 3337
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 21/242 (8%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD+F WG+G G LG G + D PK +E+ V +IACG A
Sbjct: 4113 AAGDLFTWGKGRY-GRLGHGDSE---------DQLKPKLVEALQGYRVIDIACGSGDAQT 4162
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4222
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTW ++ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4223 VYTW-QVFRDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S ++GKL
Sbjct: 4281 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-------STSKPANAGKL 4333
Query: 269 FT 270
T
Sbjct: 4334 PT 4335
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4056
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGD 4116
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
++T G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRV 304
+T ++V S+ K+F WG DK +LG G K +K+ VP+ L N +V
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 3001
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSY 361
A G A+T G VY G G+LG + G +P R LS V+++A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H LT +V++WG+G +G+LGH + + P L+EALK K+++ IACG++ +AAI
Sbjct: 3062 HAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121
Query: 420 --LHKW 423
L+ W
Sbjct: 3122 GELYTW 3127
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3012
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 3013 -VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3071
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3130
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2965 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3181
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3955 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4011
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEA 4071
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V I+ G H+A +T+AG LFT+G G +G L
Sbjct: 4072 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRL 4128
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4176
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4237 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL + VV V + GGRHA +
Sbjct: 3015 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 3067
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3232
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3292
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3293 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4063 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++F+WG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 4113 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4173 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4324
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4325 --KPANAGKLPTQV 4336
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2948 VRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3005
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3006 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRH 3062
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT--- 3119
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3120 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3170
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3171 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3229
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3230 VWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG +G ++V P + L+N+ + VAC E ++ +G +YT
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V L ++ I+ H +++ G++F++G G G
Sbjct: 477 AYNSDTLG---------PQLVQS-LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E LK K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 23/299 (7%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL 76
+++ S G + A G+VF WG G G G LG G KM S+L V+
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDG-GRLGHG--DTVPLEEPKMISALSGKQAGKHVV 555
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC- 135
+IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V+C
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ T AVT +G +++WGDG Y G LG G PK + L+ + + + CG
Sbjct: 613 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQF 669
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ +T GQ++T+G G LGHG + V P+ +E LKG + + A G H A+ E
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE-- 727
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
++ +WG D+ + + K P + L + +ACG + + A
Sbjct: 728 ----------DSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA 776
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 123/242 (50%), Gaps = 22/242 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD+F WG+G G LG G + D PK +E+ V +IACG A
Sbjct: 4113 AAGDLFTWGKGRY-GRLGHGDSE---------DQLKPKLVEALQGYRVIDIACGSGDAQT 4162
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4222
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4223 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S ++GKL
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-------STSKPANAGKL 4332
Query: 269 FT 270
T
Sbjct: 4333 PT 4334
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3070 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3240 RLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3298
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3337
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRV 304
+T ++V S+ K+F WG DK +LG G K +K+ VP+ L N +V
Sbjct: 2943 NTGSLVRKKAAGLESAATIRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQV 3001
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSY 361
A G A+T G VY G G+LG + G +P R LS V+++A G
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H LT +V++WG+G +G+LGH + + P L+EALK K+++ IACG++ +AAI
Sbjct: 3062 HAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSS 3121
Query: 420 --LHKW 423
L+ W
Sbjct: 3122 GELYTW 3127
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL+ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEG 4063
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4056
Query: 264 SS----GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+ G++++WG+ + G+LGHG++ P + +L +A G + + +T +G
Sbjct: 4057 LALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
++T G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4117 LFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3013
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 3014 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3071
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3130
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 21 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 70
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 130
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 131 HCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAV 187
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV-------- 239
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T+ALT+ G
Sbjct: 240 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDG 295
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 296 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 354
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEAL 377
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + CG+ H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S EVY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 351
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 352 WGRGTNGQLGIGESVDRNFPKIIEALS 378
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 21 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 70
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 130
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 131 HCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAV 187
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-------- 239
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T+ALT+ G
Sbjct: 240 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDG 295
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 296 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 354
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEAL 377
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + CG+ H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S EVY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 351
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 352 WGRGTNGQLGIGESVDRNFPKIIEALS 378
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGTDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL + VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3020
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3021 TN--GRLGLGISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGELYTWG 3125
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3186 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3244
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ I +AC E ++ +G +Y
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYM---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V G L ++ I+ H + + G++F++G G G
Sbjct: 477 AYNSDTLG---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSW 734
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 152/323 (47%), Gaps = 31/323 (9%)
Query: 1 MKAMAMDAFRVSLSSAVSSSS--QGSGHDDGD------ALGDVFIWGEGTGDGVLGGGLN 52
M+A D L ++S + + + H DG A G+VF WG G G G LG G
Sbjct: 475 MQAYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDG-GRLGHG-- 531
Query: 53 RVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV 112
KM S+L V+ +IACG ++A + +GE+++WG + GRLGHG
Sbjct: 532 DTVPLEEPKMISALSGKQAGKHVV---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGS 588
Query: 113 DSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
D P L+ L + + V+C G+ T AVT +G +++WGDG Y G LG G
Sbjct: 589 SEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGC 646
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
PK + L+ + V + CG + +T GQ++++G G LGHG + V P+ +E
Sbjct: 647 KTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
L+G + V A G H A+ E ++ +WG D+ + + K P
Sbjct: 706 GLQGKKVVDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLRITKPEP 753
Query: 291 TCVAALVEPNFCRVACGHSLTVA 313
T + L + +ACG + + A
Sbjct: 754 TALPGLDTKHIVGIACGPAQSFA 776
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 113/235 (48%), Gaps = 19/235 (8%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV-----VEVMV 255
+G ++ +G G LG + V +P E+L LR ++ G AV VE +
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013
Query: 256 G-NSSSSNCSSGK-----------LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
G C SG +++WGDGD G+LG G + VP + +L +
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4073
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYH 362
V CG +VALT SG VYT G Y +LG+ D + P +V+G K + IA GS H
Sbjct: 4074 VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLH 4132
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T EVYTWG G+LG G T+ P LV AL+ K++ +ACG+ T A
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 135/282 (47%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3009
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G+++ G+ T G LG G +V IPR++ +L + A H+ G
Sbjct: 3010 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAV---HSG-------GRH 3059
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+ + GK+F+WG+GD G+LGH + P + AL +ACG S + A+T+SG
Sbjct: 3060 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 3119
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+YT G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3237 RLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 108/225 (48%), Gaps = 32/225 (14%)
Query: 122 IDALSNMNIELVACG--EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
++AL + +ACG + T +T +++WGDG Y G LG G VP +++
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKIDS- 4065
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L G+ V + CG + +T +G ++T+G G + LGHG V PR+V+ L+G + +
Sbjct: 4066 LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIA 4125
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A G H E G+++TWGD D+G+LG G A P VAAL
Sbjct: 4126 IATGSLHCVCCTE------------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 4173
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
RVACG + T+A +TS P GKLP +V
Sbjct: 4174 KINRVACGSAHTLAWSTS---------------KPANAGKLPTQV 4203
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 113/217 (52%), Gaps = 16/217 (7%)
Query: 56 SCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV--NKQGEVFSWGEESGGRLGHGVD 113
+ F V D + +AL+ V+D IACG A + V+SWG+ G+LG G
Sbjct: 3999 TLFAVTADGKV-EALQGYRVID---IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4054
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
P ID+L+ + + V CG + A+T SG +YTWG G Y+ LGHG++ P
Sbjct: 4055 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR--LGHGSDDHVRRP 4112
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK 233
++V G L+G V +I+ G H T G+++T+GD G LG G ++ PR V +L+
Sbjct: 4113 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4171
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G + R ACG HT A S+S ++GKL T
Sbjct: 4172 GKKINRVACGSAHTLAW-------STSKPANAGKLPT 4201
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K+F WG DK +LG G K +K+ VP+ L N +VA G A+T G VY G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3019
Query: 326 PVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG + G +P R LS V+++A G H LT +V++WG+G +G+
Sbjct: 3020 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3079
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
LGH + + P L+EALK K+++ IACG++ +AAI L+ W
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3124
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 3010 -VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
K A+ +RV + S +Q D D +W G GD G L R GS G K
Sbjct: 4008 KVEALQGYRVIDIACGSGDAQTLCLTDDDT-----VWSWGDGDY---GKLGRGGS-DGCK 4058
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+ P ++S L V + CG + + + K G V++WG+ RLGHG D V P+
Sbjct: 4059 V----PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4114
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+ L + +A G H T G++YTWGD + G LG G + P+ V L+
Sbjct: 4115 VQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN--DEGQLGDGTTNAIQRPRLV-AALQ 4171
Query: 182 GIHVSSISCG-----PWHTAVVTSAGQLFT 206
G ++ ++CG W T+ +AG+L T
Sbjct: 4172 GKKINRVACGSAHTLAWSTSKPANAGKLPT 4201
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SG ++ WG +G+LG + VPT AL ++ G A+T
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVT--------- 4004
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGR 382
ADGK VE L V +IACGS LT V++WG G G+
Sbjct: 4005 -----------ADGK----VEA-LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4048
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG G +D P +++L V + CG+ F+ A+
Sbjct: 4049 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4084
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 199/389 (51%), Gaps = 45/389 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG G + G N V + ++ P ++ Q + CG ++
Sbjct: 3536 DVYLWGAGRHGQLAEAGRN-------VMVPAAAPSFSQA------QQVICGQNCTFVIQA 3582
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 3583 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3642
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V +SCG H+AVVTS G+LFTFG+G
Sbjct: 3643 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3699
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P R ACG+ HT AV + ++
Sbjct: 3700 DYGRLGLGNTSNKKLPE-----------RVACGLNHTLAV-----------SADGSMVWA 3737
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+GDGD G+LG G+ AK P V L +VACG +VALT GHVYT G
Sbjct: 3738 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 3795
Query: 331 LGNPQADGKLPNRVEGK--LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+G P+ + NR + L+ +E++A G+ H L S +VY WG + G+LG G T
Sbjct: 3796 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 3855
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+LV L+ K V+ I+ G +AA
Sbjct: 3856 NHVREPTLVTVLQGKNVRQISAGRCHSAA 3884
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 418
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 479 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 583
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 643
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 644 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 702
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLA 730
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 163/328 (49%), Gaps = 35/328 (10%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V+ WG G+L +V+ P + S + V CG+ T + +G + G+G
Sbjct: 3536 DVYLWGAGRHGQLAEA-GRNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEG 3592
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 3593 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3649
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ PR++E+L+G V+ +CG H+A V S GKLFT+G
Sbjct: 3650 GKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFTFG 3697
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG-HVYTMGSPVYGQL 331
+GD GRLG G+ K +P RVACG + T+A++ G V+ G YG+L
Sbjct: 3698 NGDYGRLGLGNTSNKKLPE-----------RVACGLNHTLAVSADGSMVWAFGDGDYGKL 3746
Query: 332 GNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + K P +V+ L ++++ACG+ LT VYT+G+ L G +
Sbjct: 3747 GLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 3805
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
N P V L ++ +A G T A+
Sbjct: 3806 HNRPQQVPVLAGVVIEDVAVGAEHTLAL 3833
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/306 (32%), Positives = 146/306 (47%), Gaps = 37/306 (12%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 3613 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 3671
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG H+ VT G L+T+G+G Y G LG GN + +P+RV
Sbjct: 3672 EEVVQMSCGFKHSAVVTSDGKLFTFGNGDY--GRLGLGNTSNKKLPERV----------- 3718
Query: 188 ISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+CG HT V++ G + + FGDG +G LG G+ + S P++V+ L G+ + ACG
Sbjct: 3719 -ACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQF 3777
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+ A+ + G ++T+G L G P V L VA
Sbjct: 3778 SVALTK------------DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAV 3825
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G T+AL ++G VY GS GQLG N + L ++GK V +I+ G H
Sbjct: 3826 GAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK----NVRQISAGRCH 3881
Query: 363 VAVLTS 368
A T+
Sbjct: 3882 SAAWTA 3887
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 35/283 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G + G +R P+ +E+ +V ++CG +H+A+V
Sbjct: 3639 GEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALQGEEVVQMSCGFKHSAVVT 3688
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++F++G GRLG G S+ P E VACG HT AV+ G + W
Sbjct: 3689 SDGKLFTFGNGDYGRLGLGNTSNKKLP-----------ERVACGLNHTLAVSADGSM-VW 3736
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G ++G LG GN + P++V+ L GI + ++CG + +T G ++TFG
Sbjct: 3737 AFGDGDYGKLGLGNSTAKSSPQKVD-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL 3795
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L G ++ + P++V L G+ A G HT A+ S+G ++ WG
Sbjct: 3796 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALA------------STGDVYAWG 3843
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G+LG G PT V L N +++ G + A T
Sbjct: 3844 SNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWT 3886
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 134/259 (51%), Gaps = 29/259 (11%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 405 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 464
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 465 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 512
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 513 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 569
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTS 629
Query: 420 ---LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TGQVYAWGCGA----CLGC 644
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 459 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 509
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 510 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 564
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 565 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 622
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 623 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL-- 678
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 679 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 728
Query: 312 VALT 315
+A T
Sbjct: 729 LAWT 732
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 36 FIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+W G GD G LG G S P+ ++ + ++ +ACG + + + K
Sbjct: 3734 MVWAFGDGDYGKLG---------LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 3784
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V+++G++ L G + P+ + L+ + IE VA G HT A+ +GD+Y WG
Sbjct: 3785 GHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGS 3844
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ LGH N V P V L+G +V IS G H+A T+
Sbjct: 3845 NSEGQLGLGHTNHVRE--PTLVT-VLQGKNVRQISAGRCHSAAWTA 3887
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 559 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 608
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 609 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 666
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 667 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 723
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 724 GTSHSLAWTA 733
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 189/386 (48%), Gaps = 27/386 (6%)
Query: 17 VSSSSQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
V S S G+ H GD+ WG G DG LG G + LP + +
Sbjct: 16 VISVSAGASHTVALLSGDLVCSWGRGE-DGQLG---------HGDAEERHLPLVISALDD 65
Query: 76 LDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
++ +I CG H A V+SWG GRLGHG SD+ P+ I L + I+ +A
Sbjct: 66 CEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIA 125
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
CG+ H A+T G++++WG LGH +V VP +V EGI V ++ G H
Sbjct: 126 CGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL--VPNKV-AAFEGIAVKMLAAGAEH 182
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
TA VT +G+L+ +G G +G LG GDR +P EV ++ G + ACG HT AV
Sbjct: 183 TAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVA--- 239
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+SG L+T+G G+LGHGD E LVP V AL V+ G TVAL
Sbjct: 240 ---------NSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVAL 290
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G +Y G +GQ+G D ++ + V + CG H +T + VY+
Sbjct: 291 DEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYS 350
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEAL 400
WG+G +G+LGHGD DR P +E L
Sbjct: 351 WGRGTSGQLGHGDAVDRCVPKRIELL 376
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 181/343 (52%), Gaps = 18/343 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +++ G H + V SWG G+LGHG + P +I AL + I + CG
Sbjct: 16 VISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGA 75
Query: 138 YHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A + S +Y+WG G +FG LGHGN ++P+ + G L+G+ + I+CG H
Sbjct: 76 DHTTARSESTRTVYSWGWG--DFGRLGHGNSSDLFIPRAIKG-LKGLEIKQIACGDSHCL 132
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+T G++ ++G G LG G + V +P +V + +G+ A G HTAAV E
Sbjct: 133 AITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTE---- 188
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SGKL+ WG G G LG GD+ +LVP VAA+ VACG T+A+
Sbjct: 189 --------SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVAN 240
Query: 317 SGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
SG++YT G YGQLG+ D +P++V+ L ++ ++ G H L E+Y W
Sbjct: 241 SGNLYTFGWSKYGQLGHGDFEDHLVPHQVQ-ALKNKTIQAVSGGWRHTVALDEDGELYGW 299
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G++G G+TDD NSP L+ + +++V + CG T AI
Sbjct: 300 GWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAI 342
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 44 DGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG 101
DG L G G N+ G G D + PK + V V + CG RH + +G V+SWG
Sbjct: 293 DGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWG 352
Query: 102 EESGGRLGHGVDSDVLHPKLIDALS 126
+ G+LGHG D PK I+ LS
Sbjct: 353 RGTSGQLGHGDAVDRCVPKRIELLS 377
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 203/390 (52%), Gaps = 32/390 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG D + GGL G K+ S P + L + IA G + +
Sbjct: 559 DVFMWGLNDKDQL--GGLK------GSKVKS--PTLCDHLSSLQCKFIAGGSKSTFFITN 608
Query: 94 QGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
+G+++S GE S G+LG G + +V P+L+ L+ + + V+ G H A+T G +
Sbjct: 609 KGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAF 668
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG G LGHGN +S P + + I V+ ISCG H+A + L+T+G G
Sbjct: 669 SWGDGEN--GQLGHGNLMSCSKPHLIEAFVGKI-VTDISCGSAHSAAIVENKYLYTWGLG 725
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KL 268
FG LGHGD +++ P+ V G V+ +CG + + C + K+
Sbjct: 726 DFGRLGHGDEETILQPKFVTHFLGYNVVQVSCG------------SRDAQTVCITDDDKV 773
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G E L+P V L C++ CG TVALT +G V+T G +
Sbjct: 774 WSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDF 833
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ + P VEG L V +IA G+ H +T EV++WG +G+LG G+
Sbjct: 834 YRLGHGTDIHVRQPKLVEG-LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGE 892
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
TD + P+L+ L + ++K +ACG++ + A
Sbjct: 893 TDVKKVPNLITGLHNHRIKYVACGSSHSIA 922
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 184/370 (49%), Gaps = 22/370 (5%)
Query: 51 LNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGH 110
L RV F +M L L L N+ + VF+ G + G+LG
Sbjct: 1455 LARVNGHFSAEMCVKLIDNL-----LKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGL 1509
Query: 111 GVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
G V P+L++++ ++NI+ ++ G H A++ G++++WG+G G LGHGN
Sbjct: 1510 GYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEG--EDGKLGHGNRQ 1567
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
+ PKR+ G +++I G H+A + G+L+T+G G +G LGHGD P++
Sbjct: 1568 TSSQPKRIEF-FCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQ 1626
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
VE+L+ + ACG + + + N + +++WGDGD G+LG G +
Sbjct: 1627 VEALQFFFVLDVACG---SGDAQTLCITNDDN-------VWSWGDGDYGKLGRGGSDGCK 1676
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGK 347
VP + L +V CG ++ALT G +YT G Y +LG+ + + P V
Sbjct: 1677 VPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTAL 1736
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
+K V I+CGS H V T + EVY WG G+LG G R +P+L L +K++
Sbjct: 1737 FNK-IVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDR 1795
Query: 408 IACGTNFTAA 417
I+CG+ T A
Sbjct: 1796 ISCGSAHTIA 1805
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 166/332 (50%), Gaps = 20/332 (6%)
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
NKQ +VF WG +LG S V P L D LS++ + +A G T +T G LY+
Sbjct: 555 NKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYS 614
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGD 209
G+ + FG LG G+ + R+ L + V+ +S G H +TS G F++GD
Sbjct: 615 CGESS--FGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGD 672
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGHG+ S S P +E+ G +CG H+AA+VE + L+
Sbjct: 673 GENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE------------NKYLY 720
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG GD GRLGHGD+E L P V + N +V+CG + TV +T V++ G
Sbjct: 721 TWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDGD 780
Query: 328 YGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+G+LG ++ L P VE +L + +I CG+ LT V+TWGKG RLGHG
Sbjct: 781 FGKLGRGGSERCLIPVEVE-QLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGHG 839
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P LVE L+ K V IA G A+
Sbjct: 840 TDIHVRQPKLVEGLRGKHVIDIAVGALHCLAV 871
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 150/308 (48%), Gaps = 20/308 (6%)
Query: 67 PKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
P+ LES ++++ I+ GGRH ++ GEVFSWGE G+LGHG PK I+
Sbjct: 1518 PRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEF 1577
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I + G H+ A+ L+G+LYTWG G Y G LGHG+ PK+V L+
Sbjct: 1578 FCGKIITNICAGGSHSAAIGLNGELYTWGKGRY--GRLGHGDSDDQLKPKQVEA-LQFFF 1634
Query: 185 VSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
V ++CG T +T+ ++++GDG +G LG G +P +E L G V+ C
Sbjct: 1635 VLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVEC 1694
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G + A+ + G L+TWG GD RLGHG +E P V AL
Sbjct: 1695 GSQFSMALTKY------------GVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVT 1742
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
++CG V T G VY G GQLG+ + + L ++ I+CGS H
Sbjct: 1743 SISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAH 1802
Query: 363 -VAVLTSK 369
+A TSK
Sbjct: 1803 TIAWSTSK 1810
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 156/320 (48%), Gaps = 20/320 (6%)
Query: 54 VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD 113
+G G L L +V V ++ GG H + G FSWG+ G+LGHG
Sbjct: 625 IGDITGNVTSPRLVTGLNQLIVTKV-SVHSGGNHVMALTSDGLAFSWGDGENGQLGHGNL 683
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
P LI+A + ++CG H+ A+ + LYTWG G +FG LGHG+E + P
Sbjct: 684 MSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWGLG--DFGRLGHGDEETILQP 741
Query: 174 KRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
K V L G +V +SCG T +T +++++GDG FG LG G + IP EVE
Sbjct: 742 KFVTHFL-GYNVVQVSCGSRDAQTVCITDDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQ 800
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
L+GL+ + CG T A+ + +G ++TWG GD RLGHG P
Sbjct: 801 LRGLQICKILCGAQFTVALTK------------TGTVWTWGKGDFYRLGHGTDIHVRQPK 848
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSK 350
V L + +A G +A+T G V++ G +GQLG + D K+PN + G L
Sbjct: 849 LVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITG-LHN 907
Query: 351 SFVEEIACGSYHVAVLTSKT 370
++ +ACGS H T T
Sbjct: 908 HRIKYVACGSSHSIAWTEIT 927
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 141/285 (49%), Gaps = 27/285 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+G +G LG G + SC S P +E+ V V +I+CG H+A +
Sbjct: 665 GLAFSWGDGE-NGQLGHG--NLMSC-------SKPHLIEAFVGKIVTDISCGSAHSAAIV 714
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
+ +++WG GRLGHG + +L PK + N+ V+CG + T +T ++
Sbjct: 715 ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVW 774
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G +P V L G+ + I CG T +T G ++T+G G
Sbjct: 775 SWGDG--DFGKLGRGGSERCLIPVEVE-QLRGLQICKILCGAQFTVALTKTGTVWTWGKG 831
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
F LGHG V P+ VE L+G + A G H AV + G++F+
Sbjct: 832 DFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQ------------DGEVFS 879
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
WGD D G+LG G+ + K VP + L VACG S ++A T
Sbjct: 880 WGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWT 924
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/287 (34%), Positives = 141/287 (49%), Gaps = 27/287 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WGEG DG LG G NR SS PK +E + NI GG H+A +
Sbjct: 1548 GEVFSWGEGE-DGKLGHG-NR--------QTSSQPKRIEFFCGKIITNICAGGSHSAAIG 1597
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
GE+++WG+ GRLGHG D L PK ++AL + VAC G+ T +T +++
Sbjct: 1598 LNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP + L G + + CG + +T G L+T+G G
Sbjct: 1658 SWGDGDY--GKLGRGGSDGCKVPMIIED-LSGKGIVKVECGSQFSMALTKYGVLYTWGKG 1714
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P V +L +CG H + G+++
Sbjct: 1715 DYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTD------------EGEVYC 1762
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
WGD D+G+LG G A+ PT L+ R++CG + T+A +TS
Sbjct: 1763 WGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIAWSTS 1809
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 184 HVSSISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRA 240
H I C T +T+ G L F G G G LG G ++V+ PR +ES+K ++ +
Sbjct: 1478 HNVKIDCD---TVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISV 1534
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
G H A+ S G++F+WG+G+ G+LGHG+++ P +
Sbjct: 1535 HSGGRHCLAL------------SSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKI 1582
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACG 359
+ G S + A+ +G +YT G YG+LG+ +D +L P +VE L FV ++ACG
Sbjct: 1583 ITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEA-LQFFFVLDVACG 1641
Query: 360 S--YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
S +T+ V++WG G G+LG G +D P ++E L K + + CG+ F+ A
Sbjct: 1642 SGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMA 1701
Query: 418 I----CLHKWVSG 426
+ L+ W G
Sbjct: 1702 LTKYGVLYTWGKG 1714
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 7/162 (4%)
Query: 268 LFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+F WG DK +LG G K +K+ PT L +A G T +T G +Y+ G
Sbjct: 560 VFMWGLNDKDQLG-GLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSCGES 618
Query: 327 VYGQLGNPQADGKL--PNRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
+G+LG G + P V G L++ V +++ G HV LTS ++WG G NG+
Sbjct: 619 SFGKLGIGDITGNVTSPRLVTG-LNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQ 677
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
LGHG+ + P L+EA K V I+CG+ +AAI +K++
Sbjct: 678 LGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYL 719
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVAC--GHSLTVALTTSGHV 320
+ GKL++ G+ G+LG GD + P V L + +V+ G + +ALT+ G
Sbjct: 608 NKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLA 667
Query: 321 YTMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
++ G GQLG N + K P+ +E + K V +I+CGS H A + +YTWG G
Sbjct: 668 FSWGDGENGQLGHGNLMSCSK-PHLIEAFVGK-IVTDISCGSAHSAAIVENKYLYTWGLG 725
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P V V ++CG+ +C+
Sbjct: 726 DFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCI 767
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 10 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 59
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 60 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 119
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 120 HCLAVTMEGEVQSWGRN--QNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAV 176
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-------- 228
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T+ALT+ G
Sbjct: 229 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSDG 284
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 285 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 343
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEAL 366
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 69 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 125
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 178
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGFRHTMALTSDGKLYGWGWN 292
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 293 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + CG+ H
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S EVY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 69 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 281 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 340
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 341 WGRGTNGQLGIGESVDRNFPKIIEALS 367
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 22 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 71
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 72 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 131
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 132 HCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAV 188
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-------- 240
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T+ALT+ G
Sbjct: 241 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDG 296
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 297 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 355
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 356 GTNGQLGIGESVDRNFPKIIEAL 378
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 21 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 80
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 81 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 137
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 190
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 191 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 246 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 304
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 305 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 344
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + CG+ H
Sbjct: 21 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 80
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S EVY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 81 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 138
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 293 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 352
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 353 WGRGTNGQLGIGESVDRNFPKIIEALS 379
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 10 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 59
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 60 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 119
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 120 HCLAVTMEGEVQSWGRN--QNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGAEHTAAV 176
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-------- 228
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T+ALT+ G
Sbjct: 229 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDG 284
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 285 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 343
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 344 GTNGQLGIGESVDRNFPKIIEAL 366
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 177/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 69 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 125
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 178
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 292
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 293 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + CG+ H
Sbjct: 9 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S EVY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 69 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 281 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 340
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 341 WGRGTNGQLGIGESVDRNFPKIIEALS 367
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 192/383 (50%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 21 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 70
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 71 SVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 130
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 131 HCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIPIKMVAAGAEHTAAV 187
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISV-------- 239
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T+ALT+ G
Sbjct: 240 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDG 295
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 296 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 354
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 355 GTNGQLGIGESVDRNFPKIIEAL 377
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 176/340 (51%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+ A G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTE------- 189
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G H LTS ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + CG+ H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S EVY+WG G GRLGHG++ D +P ++AL ++K IACG + A+ +
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 351
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 352 WGRGTNGQLGIGESVDRNFPKIIEALS 378
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2958 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G++++ GE + GRLG G+ S + P+ I ALSN I+ VA G H A+T+ G +++
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFS 3067
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+++G G
Sbjct: 3068 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3124
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3125 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTL----------ALTDEGFVFSW 3174
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E VP + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3175 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3234
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3235 GHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3293
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3294 NRKPTLVQGLEGQKITRVACGSSHSVA 3320
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 199/384 (51%), Gaps = 23/384 (5%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P + E+ L + G + V G++
Sbjct: 3949 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKL 4005
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I VA G H A++ G++Y+WG+
Sbjct: 4006 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEA 4065
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G+ V I+ G H+A +T++G+LFT+G G +G L
Sbjct: 4066 --EDGKLGHGNRSPCDRP-RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 4122
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FTWGDG 274
GHGD + P+ V++L+G R + ACG G++ + + + ++WGDG
Sbjct: 4123 GHGDSEDQLKPKLVDALQGHRVIDVACGS-----------GDAQTLCLTDDDMVWSWGDG 4171
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + +P + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 DYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4231
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 SDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4290
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4291 PRLVAALQGKKINRVACGSAHTLA 4314
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4057 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGVEVVDIAAGGAHSACIT 4106
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD--LY 150
GE+F+WG+ GRLGHG D L PKL+DAL + VACG + L+ D ++
Sbjct: 4107 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 4166
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4167 SWGDGDY--GKLGRGGSDGCKIPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4223
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4224 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4271
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4272 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4318
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4319 --KPTNAGKLPAQV 4330
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 169/341 (49%), Gaps = 30/341 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G ++ GE T +G LG GL+ G+ +P+ + + ++ +A GGRHA
Sbjct: 3008 GKIYACGEAT-NGRLGLGLSS-GTI-------PIPRQITALSNYVIKKVAVHSGGRHAMA 3058
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY
Sbjct: 3059 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3118
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
+WG G Y G LGHG+ + PK V L G V ++CG T +T G +F++G
Sbjct: 3119 SWGLGEY--GRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGFVFSWG 3175
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + ++P+ +E L G + CG + A+ + SG +
Sbjct: 3176 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3223
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L VA G +A+T +G VY G +
Sbjct: 3224 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3283
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GQ GN + P V+G L + +ACGS H T+
Sbjct: 3284 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3323
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 168/338 (49%), Gaps = 40/338 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 3016
Query: 156 TYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G LG G +S++V K+V ++ G H +T G+
Sbjct: 3017 TN--GRLGLGLSSGTIPIPRQITALSNYVIKKV----------AVHSGGRHAMALTVDGK 3064
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3065 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------ 3112
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVY 321
SSG+L++WG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V+
Sbjct: 3113 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVF 3172
Query: 322 TMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G +G+LG ++G +P +E +L+ V +I CG+ LT V+TWGKG
Sbjct: 3173 SWGDGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3231
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG P +VE L+ K++ +A G A+
Sbjct: 3232 FRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3269
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 141/282 (50%), Gaps = 23/282 (8%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL----SNMNIELVACGEYHT 140
G+H ++ GEVFSWG GGRLGHG + + PK+I + ++ VACG ++
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYS 554
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVV 198
A+T G+LYTWG G N+G LGHG+ P V +G+ V ++CG T V
Sbjct: 555 AAITADGELYTWGRG--NYGRLGHGSSEDQTTPMVVTA-FKGLKVVDVACGSGDAQTLAV 611
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T GQ++++GDG +G LG G P+ VE L+ L V+ CG + A+ +
Sbjct: 612 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------ 665
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+++TWG GD RLGHG E P + +L VA G + +ALT G
Sbjct: 666 ------DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDG 719
Query: 319 HVYTMGSPVYGQ-LGNPQADGKLPNRVEGKLSKSFVEEIACG 359
V + GS Q ++ K P + G SK V I+CG
Sbjct: 720 EVLSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIV-GISCG 760
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 162/332 (48%), Gaps = 40/332 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG LG + ++V P ALS++ + + C E ++ SG +Y+
Sbjct: 415 EVIAWG-----LLGWKLYANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS---- 465
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
N+ + H + R + ++ P H ++S G++F++G G G
Sbjct: 466 -QNYKSTTLAPMLIHVLSSR--------KIVKLAAHPDGQHYLALSSNGEVFSWGCGDGG 516
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 517 RLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAIT------------ADGELY 564
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + P V A VACG + T+A+T +G V++ G
Sbjct: 565 TWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGD 624
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P VE KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 683
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P L+++L+ K+V +A G+ A+
Sbjct: 684 TDEHVRYPKLLDSLQGKKVVDVAVGSTHCLAL 715
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 33 GDVFIWGEGTGDGVLGGG-------LNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGG 85
G+VF WG G G G LG G +G+ G + V ++ACG
Sbjct: 505 GEVFSWGCGDG-GRLGHGDTTYLEEPKMIGTFNGKQAGKH------------VVHVACGS 551
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAV 143
++A + GE+++WG + GRLGHG D P ++ A + + VAC G+ T AV
Sbjct: 552 TYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAV 611
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T +G +++WGDG Y G LG G PK V L+ + + + CG + +T GQ
Sbjct: 612 TENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQ 668
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G G LGHG + V P+ ++SL+G + V A G H A+ +
Sbjct: 669 VYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTD----------- 717
Query: 264 SSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G++ +WG DK L H D K P + L + ++CG + A ++S
Sbjct: 718 -DGEVLSWGSNDK--LQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFAWSSS 770
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3063 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3112
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE++SWG GRLGHG ++ L PKL+ L + VACG + T A+T G ++
Sbjct: 3113 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVF 3172
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3173 SWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3232
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3233 RLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3291
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3292 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3330
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 24/284 (8%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 2951 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3005
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVG 256
G+++ G+ T G LG G ++ IPR++ +L ++ V G H A+
Sbjct: 3006 VEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALT----- 3060
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
GK+F+WG+GD G+LGH + P + AL +ACG S + A+T+
Sbjct: 3061 -------VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITS 3113
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYT 374
SG +Y+ G YG+LG+ +L ++ L V ++ACGS LT + V++
Sbjct: 3114 SGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFS 3173
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 3174 WGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 3217
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 19/277 (6%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 3950 SGTIYGWGHN--HRGQLGGIEGAKVKVPTSTEA-LATLRPVQLIGGEQTLFAVTADGKLY 4006
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
G G G LG G +SVS P +ES++ +R V G H A+
Sbjct: 4007 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL------------S 4054
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
S G++++WG+ + G+LGHG++ P + +L +A G + + +T SG ++T
Sbjct: 4055 SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4114
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANG 381
G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G G
Sbjct: 4115 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYG 4174
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4175 KLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVAL 4211
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3950 SGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVT--------- 4000
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4001 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4057
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ E++TWGKG
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4117
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LV+AL+ +V +ACG+ +CL
Sbjct: 4118 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4159
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2957 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3006
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 3007 --EGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGK 3064
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+Y+WG G
Sbjct: 3065 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLG 3123
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P LV+ L +V +ACG+ + L
Sbjct: 3124 EYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3165
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G L R GS G K PK +E LD+ + CG + + +
Sbjct: 615 GQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLVEKLQDLDIVKVCCGSQFSVALT 664
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V++WG+ RLGHG D V +PKL+D+L + VA G H A+T G++ +W
Sbjct: 665 KDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSW 724
Query: 153 G--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP-----WHTAVVTSAGQLF 205
G D +F L + PK + G L H+ ISCGP W ++ S G+
Sbjct: 725 GSNDKLQHFDTLFSNKK----QPKALPG-LNSKHIVGISCGPGQSFAWSSSSEWSVGKRV 779
Query: 206 TF 207
F
Sbjct: 780 PF 781
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2923 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G++++ GE + GRLG G+ S + P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3032
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+++G G
Sbjct: 3033 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3089
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3090 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3139
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3140 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3199
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3200 GHGTDVHVRKPQIVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3258
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3259 NRKPTLVQGLEGQKITRVACGSSHSVA 3285
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 199/384 (51%), Gaps = 23/384 (5%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3893 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKL 3949
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3950 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4009
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G+ V I+ G H+A +T++G+LFT+G G +G L
Sbjct: 4010 --EDGKLGHGNRSPCDRP-RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 4066
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FTWGDG 274
GHGD + P+ V++L+G R + ACG G++ + + + ++WGDG
Sbjct: 4067 GHGDSEDQLKPKLVDALQGHRVIDVACGS-----------GDAQTLCLTDDDMVWSWGDG 4115
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4116 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4175
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4176 SDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4234
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4235 PRLVAALQGKKINRVACGSAHTLA 4258
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 169/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GE T +G LG GL S +++ + AL + VV V + GGRHA +
Sbjct: 2973 GKIYACGEAT-NGRLGLGL----SSGTIQIPRQI-SALSNYVVKKVA-VHSGGRHAMALT 3025
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY+W
Sbjct: 3026 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3085
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3086 GLGEY--GRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3142
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3143 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3190
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3191 WGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3250
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3251 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3288
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 166/327 (50%), Gaps = 44/327 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4001 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGVEVVDIAAGGAHSACIT 4050
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD--LY 150
GE+F+WG+ GRLGHG D L PKL+DAL + VACG + L+ D ++
Sbjct: 4051 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 4110
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4111 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4167
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4168 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4215
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4216 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4262
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIA 357
P GK+P +V + + ++EI+
Sbjct: 4263 --KPTNAGKMPAQV--PMEYNHLQEIS 4285
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 2981
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P++++ L V ++ G H +T G++F++G+G
Sbjct: 2982 TN--GRLGLGLSSGTIQIPRQISA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L++WG
Sbjct: 3039 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGELYSWG 3086
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3146
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3147 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3205
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3206 HVRKPQIVEGLRGKKIVHVAVGALHCLAV 3234
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 166/342 (48%), Gaps = 46/342 (13%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG LG + ++V P ALS+ + + C E ++ SG +YT
Sbjct: 375 EVIAWG-----LLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK 429
Query: 156 TYNFG-LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTF 212
+ +L HG L + ++ P H ++++G+++++G G
Sbjct: 430 STTLAPMLIHG--------------LSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDG 475
Query: 213 GVLGHGDRKSVSIPREVESLKGLRT----VRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LGHGD + P + + G +T V+ ACG ++AAV + G+L
Sbjct: 476 GRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVT------------ADGEL 523
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSP 326
+TWG G+ GRLGHG E P V AL VACG + T+A+T +G V++ G
Sbjct: 524 YTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDG 583
Query: 327 VYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
YG+LG +DG K P VE KL + ++ CGS LT +VYTWGKG N RLGH
Sbjct: 584 DYGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGH 642
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
G + P L+++L+ K+V IA G+ A+ +H W
Sbjct: 643 GTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSW 684
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 117/234 (50%), Gaps = 21/234 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
V IACG ++A V GE+++WG + GRLGHG DV P L+ AL + VAC
Sbjct: 504 VVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGS 563
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ T AVT +G +++WGDG Y G LG G PK V L+ + + + CG +
Sbjct: 564 GDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFS 620
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T GQ++T+G G LGHG + V P+ ++SL+G + V A G H A+ +
Sbjct: 621 VALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD--- 677
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACG 307
G++ +WG DK L H D K P + L + ++CG
Sbjct: 678 ---------EGEVHSWGSNDK--LQHFDTLFPNKKQPKALPGLNSKHIVGISCG 720
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3028 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3077
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE++SWG GRLGHG ++ L PKL+ L + VACG + T A+T G ++
Sbjct: 3078 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3137
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3138 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3197
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3198 RLGHGTDVHVRKPQIVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3256
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3257 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3295
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3894 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 3948
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3949 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3994
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L +A G + + +T SG
Sbjct: 3995 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGE 4054
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
++T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4055 LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGD 4114
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4115 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4155
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3894 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 3944
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3945 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4001
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ E++TWGKG
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4061
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LV+AL+ +V +ACG+ +CL
Sbjct: 4062 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4103
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2971
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P ++AL +VA G +ALT G
Sbjct: 2972 --EGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGK 3029
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+Y+WG G
Sbjct: 3030 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLG 3088
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P LV+ L +V +ACG+ + L
Sbjct: 3089 EYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3130
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G L R GS G K PK +E LD+ + CG + + +
Sbjct: 575 GQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLVEKLQDLDIVKVCCGSQFSVALT 624
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V++WG+ RLGHG D V +PKL+D+L + +A G H A+T G++++W
Sbjct: 625 KDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSW 684
Query: 153 G--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP-----WHTAVVTSAGQLF 205
G D +F L + PK + G L H+ ISCGP W + S GQ
Sbjct: 685 GSNDKLQHFDTLFPNKK----QPKALPG-LNSKHIVGISCGPGQSFAWSSCSEWSVGQRV 739
Query: 206 TF 207
F
Sbjct: 740 PF 741
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 1770 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S + P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1879
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+++G G
Sbjct: 1880 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 1936
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R V+ ACG + + G +F+W
Sbjct: 1937 YGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTL----------ALTDEGMVFSW 1986
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 1987 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2046
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +V+ WG +G+ G+G T
Sbjct: 2047 GHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTV 2105
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 2106 NRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 198/384 (51%), Gaps = 23/384 (5%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 2761 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKL 2817
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I VA G H A++ G+LY+WG+
Sbjct: 2818 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEA 2877
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G+ V I+ G H+A +T++G+L+T+G G +G L
Sbjct: 2878 --EDGKLGHGNRSPCDRP-RVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRL 2934
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FTWGDG 274
GHGD + P+ VE+L+G R + ACG G++ + + + ++WGDG
Sbjct: 2935 GHGDSEDQLKPKLVEALQGHRVIDVACGS-----------GDAQTLCLTDDDMVWSWGDG 2983
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 2984 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 3043
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3044 SDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 3102
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 3103 PRLVAALQGKKINRVACGSAHTLA 3126
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 170/343 (49%), Gaps = 30/343 (8%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHA 88
A G V+ GE T +G LG GL+ G+ +P+ + + V+ +A GGRHA
Sbjct: 1818 AEGKVYACGEAT-NGRLGLGLSS-GTI-------PIPRQISALSNYVVKKVAVHSGGRHA 1868
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+
Sbjct: 1869 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 1928
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFT 206
LY+WG G Y G LGHG+ + PK V L G V ++CG T +T G +F+
Sbjct: 1929 LYSWGLGEY--GRLGHGDNTTQLRPKLVK-VLLGHRVVQVACGSRDAQTLALTDEGMVFS 1985
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+GDG FG LG G + +IP+ +E L G + CG + A+ + SG
Sbjct: 1986 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SG 2033
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++TWG GD RLGHG P V L VA G +A+T +G V+ G
Sbjct: 2034 VVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDN 2093
Query: 327 VYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+GQ GN + P V+G L + +ACGS H T+
Sbjct: 2094 DHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2135
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 166/327 (50%), Gaps = 44/327 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 2869 GELYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGVEVVDIAAGGAHSACIT 2918
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD--LY 150
GE+++WG+ GRLGHG D L PKL++AL + VACG + L+ D ++
Sbjct: 2919 ASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVW 2978
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 2979 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3035
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3036 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3083
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3084 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 3130
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIA 357
P GKLP +V + + ++EIA
Sbjct: 3131 --KPTNAGKLPAQV--PMEYNHLQEIA 3153
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT G +Y G+
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEA 1828
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P++++ L V ++ G H +T G++F++G+G
Sbjct: 1829 TN--GRLGLGLSSGTIPIPRQISA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 1885
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L++WG
Sbjct: 1886 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGELYSWG 1933
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGK 1993
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 1994 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2052
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 2053 HVRKPQMVEGLRGKKIVHVAVGALHCLAV 2081
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 1875 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 1924
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE++SWG GRLGHG ++ L PKL+ L + VACG + T A+T G ++
Sbjct: 1925 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVF 1984
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 1985 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2044
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ+F +GD G G+G
Sbjct: 2045 RLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTT 2103
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 2104 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 2142
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 1763 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 1817
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
+ G+++ G+ T G LG G ++ IPR++ +L + A H+ G
Sbjct: 1818 AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAV---HSG-------GRH 1867
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+ + GK+F+WG+GD G+LGH + P + AL +ACG S + A+T+SG
Sbjct: 1868 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 1927
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+Y+ G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 1928 ELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWG 1987
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 1988 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2029
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 2762 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 2816
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ G G G LG G +SVS P +ES++ +R V G H A+
Sbjct: 2817 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 2865
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G+L++WG+ + G+LGHG++ P + +L +A G + + +T SG +Y
Sbjct: 2866 -SSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELY 2924
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 2925 TWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 2984
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 2985 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3023
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 2762 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 2812
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 2813 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+Y+ G G+LG+ RV L V +IA G H A +T+ E+YTWGKG
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKG 2929
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 2930 RYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 2971
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 1769 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 1817
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
+ GK++ G+ GRLG G + +P ++AL +VA G +ALT G
Sbjct: 1818 -AEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGK 1876
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+Y+WG G
Sbjct: 1877 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLG 1935
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P LV+ L +V +ACG+ + L
Sbjct: 1936 EYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLAL 1977
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 199/384 (51%), Gaps = 23/384 (5%)
Query: 40 EGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
+G+G + G G N G G++ LP ES L + G + V G+V+
Sbjct: 3893 DGSG-AIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVY 3951
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGT 156
+ G + GRLG G V+ P L++++ ++ ++ VA G H A++ G +Y+WG+G
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEG- 4010
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LGHGN +S+ PK + L G + ++CG H+A +TSAG L+T+G G +G LG
Sbjct: 4011 -DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLG 4068
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDG 274
HGD + P+ VE+L+ + + ACG + + C + +++WGDG
Sbjct: 4069 HGDSEDQLTPKLVEALQDYKVIDVACG------------SGDAQTLCVTDDDNVWSWGDG 4116
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + VP + +L +V CG +VALT SG +YT G Y +LG+
Sbjct: 4117 DYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHG 4176
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V K + IA GS H + K EV+TWG G+LG G T
Sbjct: 4177 TDDHVRRPRKVAALQGKKII-SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQR 4235
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4236 PRLVHALQGKKITRVACGSAHTLA 4259
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 201/389 (51%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP ES L +IA G + +V+++
Sbjct: 2911 VYVWGLNDKDQL--GGLK------GSKI--KLPVYSESLSKLKPVHIAGGSKTLFVVSQE 2960
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G D + PK I LS I+ VA G H A+T G +++W
Sbjct: 2961 GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSW 3020
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN S P+ + L+ + ++CG H+A +TS+G+L+T+G G +
Sbjct: 3021 GEG--EDGKLGHGNCSSLDKPRLIES-LKSKRIRDVACGSGHSAAITSSGELYTWGLGEY 3077
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ V+SL G R ++ ACG + + + G +++WG
Sbjct: 3078 GRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTM----------ALTADGSVYSWG 3127
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P V L ++ CG ++ALT G V+T G Y +LG
Sbjct: 3128 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3187
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3188 HGNDHHVRKPTLVEGLRGKKVI-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVN 3246
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L D +V ++CG++ + A L
Sbjct: 3247 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3275
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/333 (36%), Positives = 168/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG G + +C P S V+ + GG+HA +
Sbjct: 2961 GKLYACGEGT-NGRLGLG-DDGNAC------EPKPIPFLSQYVIKKVAVHSGGKHALALT 3012
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G VFSWGE G+LGHG S + P+LI++L + I VACG H+ A+T SG+LYTW
Sbjct: 3013 QDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTW 3072
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T+ G ++++GDG
Sbjct: 3073 GLGEY--GRLGHGDTNTQLKPKLVQS-LVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3129
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G P V+ L GL V+ CG + A+ + G+++T
Sbjct: 3130 DFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKY------------GEVWT 3177
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG+ PT V L VA G +A+T +G VY G +GQ
Sbjct: 3178 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3237
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GN K P+ V +L + V ++CGS H
Sbjct: 3238 QGNGSTIVNKKPSLVH-ELDDARVNRVSCGSSH 3269
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 152/287 (52%), Gaps = 29/287 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR + PK +E + ++ ++ACGG H+A +
Sbjct: 4002 GHVYSWGEG-DDGKLGHG-NR--------LSYDRPKLIEELLGTEIVDVACGGHHSAAIT 4051
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PKL++AL + + VACG + T VT +++
Sbjct: 4052 SAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 4111
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4112 SWGDGDY--GKLGRGGSDGCKVPMKIES-LAGLGVIKVECGSQFSVALTRSGSIYTWGKG 4168
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLF 269
+ LGHG V PR+V +L+G + + A G H A CS G++F
Sbjct: 4169 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGEVF 4215
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
TWGD D+G+LG G A P V AL RVACG + T+A +T
Sbjct: 4216 TWGDNDEGQLGDGTTCALQRPRLVHALQGKKITRVACGSAHTLAWST 4262
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 168/335 (50%), Gaps = 36/335 (10%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG G G P DA++ + I+ + C E ++ SG++Y
Sbjct: 437 EVLAWGSVKFGGTGSS-------PFYCDAIAELGIKQLCCTERALMILSTSGNVY----- 484
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
++ +G+E + P+RV G V+ I+ P H +T ++++G+G G
Sbjct: 485 -----MMYYGSETQY--PQRVYG-FSDKFVAMIASHPDGKHYLALTEDSSVYSWGNGDGG 536
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGDR P+ +ESL ACG ++AA+ S+G+L+TWG
Sbjct: 537 RLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL------------SSNGELYTWGR 584
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHG+ + +VPT V+AL VACG S T+ +T SG V++ G YG+L
Sbjct: 585 GNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKL 644
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G +G ++ KL V ++ CG A LT+ EVYTWGKG RLGHG+ +
Sbjct: 645 GRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV 704
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P +EALK K+VK + G+ A+ + V G
Sbjct: 705 RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYG 739
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 175/364 (48%), Gaps = 31/364 (8%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
S P ++ L ++ + C R +++ G V+ + +G S+ +P+ +
Sbjct: 451 SSPFYCDAIAELGIKQLCCTERALMILSTSGNVY--------MMYYG--SETQYPQRVYG 500
Query: 125 LSNMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
S+ + ++A H A+T +Y+WG+G + G LGHG+ + PK + ++
Sbjct: 501 FSDKFVAMIASHPDGKHYLALTEDSSVYSWGNG--DGGRLGHGDRTWYEEPKLIESLVDK 558
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+++ I+CG ++A ++S G+L+T+G G +G LGHG+ V +P V +L G V AC
Sbjct: 559 -NITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVAC 617
Query: 243 GVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
G S + C +SG +F+WGDGD G+LG G P V L++ N
Sbjct: 618 G------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDIN 665
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACG 359
+V CG + ALT G VYT G +LG+ + + P +E +K V+E+ G
Sbjct: 666 VAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKK-VKELCVG 724
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
S HV LT VY WG+ G++ + P+L L K V + CG + A C
Sbjct: 725 SLHVLALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWC 784
Query: 420 LHKW 423
W
Sbjct: 785 TSAW 788
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 141/286 (49%), Gaps = 27/286 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G G G LG G + PK +ES V ++ IACG ++A ++
Sbjct: 527 VYSWGNGDG-GRLG---------HGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
GE+++WG + GRLGHG DV+ P L+ AL+ I VAC G+ T VT SG +++W
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSW 636
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG Y G LG G PK V+ L+ I+V+ + CG +A +T+ G+++T+G G
Sbjct: 637 GDGDY--GKLGRGGCNGSKTPKIVDKLLD-INVAKVYCGGQFSAALTAYGEVYTWGKGEA 693
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LGHG+ + V P+ +E+LK + G H A+ E + ++ WG
Sbjct: 694 YRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQL------------VYGWG 741
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
D G++ PT L N + CG + + A TS
Sbjct: 742 RNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWCTSA 787
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 118/223 (52%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P ESL LR V+ G AV
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 3945
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK++ G G GRLG G ++ ++PT + ++ +VA G +AL++ G
Sbjct: 3946 ---ADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4002
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
HVY+ G G+LG+ + P +E L V+ +ACG +H A +TS +YTWGK
Sbjct: 4003 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-VACGGHHSAAITSAGWLYTWGK 4061
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD++D+ +P LVEAL+D +V +ACG+ +C+
Sbjct: 4062 GRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4104
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG +P L + ++ G VT+ G+++
Sbjct: 3895 SGAIYGWGHN--HRGQLGGLEGAKVKLPVLCES-LSALRPVQLTGGEQTLFAVTADGKVY 3951
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G SV +P +ES++ + + A NS +C
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAV--------------NSGGKHCLA 3997
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G +++WG+GD G+LGHG++ + P + L+ VACG + A+T++G +Y
Sbjct: 3998 LSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLY 4057
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS L T V++WG G
Sbjct: 4058 TWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGD 4117
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +E+L V + CG+ F+ A+
Sbjct: 4118 YGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVAL 4156
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 116/273 (42%), Gaps = 67/273 (24%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL--PKALESAVVLDVQNIACGGRHAAL 90
G VF WGEG DG LG G +C SSL P+ +ES ++++ACG H+A
Sbjct: 3015 GRVFSWGEGE-DGKLGHG-----NC------SSLDKPRLIESLKSKRIRDVACGSGHSAA 3062
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGD 148
+ GE+++WG GRLGHG + L PKL+ +L + VACG + T A+T G
Sbjct: 3063 ITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGS 3122
Query: 149 LYTWGDGTY--------------------------------------------------N 158
+Y+WGDG + +
Sbjct: 3123 VYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGD 3182
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
+ LGHGN+ P V G L G V ++ G H VT GQ++ +GD G G+G
Sbjct: 3183 YFRLGHGNDHHVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG 3241
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P V L R R +CG H+ A V
Sbjct: 3242 STIVNKKPSLVHELDDARVNRVSCGSSHSIAWV 3274
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P H+AV + +G LG + +P ESL L+ V A G T VV
Sbjct: 2906 PQHSAV-------YVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGS-KTLFVV 2957
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHS 309
GKL+ G+G GRLG GD P + L + +VA G
Sbjct: 2958 S-----------QEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGK 3006
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+ALT G V++ G G+LG+ R+ L + ++ACGS H A +TS
Sbjct: 3007 HALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSS 3066
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
E+YTWG G GRLGHGDT+ + P LV++L ++V +ACG+ + L
Sbjct: 3067 GELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMAL 3117
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G VF WG+G G L R G C G S PK ++ + ++V + CGG+ +A
Sbjct: 629 ASGIVFSWGDGD-----YGKLGR-GGCNG----SKTPKIVDKLLDINVAKVYCGGQFSAA 678
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ GEV++WG+ RLGHG + V +PK I+AL ++ + G H A+T +Y
Sbjct: 679 LTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVY 738
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
WG Y G VS + L G +V + CGP
Sbjct: 739 GWGRNDYGQIDPALGTIVSE---PTLCPTLSGKNVIGLVCGP 777
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 10/114 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G R+G G P +E V ++A G H V
Sbjct: 3173 GEVWTWGKG--------DYFRLG--HGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVT 3222
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
G+V++WG+ G+ G+G P L+ L + + V+CG H+ A L+
Sbjct: 3223 DTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLT 3276
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2732 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G++++ GE + GRLG G+ S + P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 2841
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+++G G
Sbjct: 2842 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2899 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2948
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2949 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3008
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3009 GHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3067
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3068 NRKPTLVQGLEGQKITRVACGSSHSVA 3094
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 169/341 (49%), Gaps = 30/341 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G ++ GE T +G LG GL+ G+ +P+ + + V+ +A GGRHA
Sbjct: 2782 GKIYACGEAT-NGRLGLGLSS-GTI-------PIPRQITALSNYVVKKVAVHSGGRHAMA 2832
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY
Sbjct: 2833 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELY 2892
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
+WG G Y G LGHG+ + PK V L G V ++CG T +T G +F++G
Sbjct: 2893 SWGLGEY--GRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2949
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + +IP+ +E L G + CG + A+ + SG +
Sbjct: 2950 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2997
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L VA G +A+T +G VY G +
Sbjct: 2998 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3057
Query: 329 GQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GQ GN + P V+G L + +ACGS H T+
Sbjct: 3058 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3097
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 196/399 (49%), Gaps = 40/399 (10%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3755 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKL 3811
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I VA G H A++ G++Y+WG+
Sbjct: 3812 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEA 3871
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G+ V I+ G H+A +T++G+LFT+G G +G L
Sbjct: 3872 --EDGKLGHGNRSPCDRP-RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 3928
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FTWGDG 274
GHGD + P+ V++L+G R + ACG G++ + + + ++WGDG
Sbjct: 3929 GHGDSEDQLKPKLVDALQGHRVIDVACGS-----------GDAQTLCLTDDDMVWSWGDG 3977
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + P + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3978 DYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4037
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-----------------EVYTWG 376
D + P +V+G K + IA GS H T EVYTWG
Sbjct: 4038 SDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWG 4096
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
G+LG G T+ P LV AL+ K++ +ACG+ T
Sbjct: 4097 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 167/332 (50%), Gaps = 37/332 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 3863 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGVEVVDIAAGGAHSACIT 3912
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD--LY 150
GE+F+WG+ GRLGHG D L PKL+DAL + VACG + L+ D ++
Sbjct: 3913 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 3972
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G P +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3973 SWGDGDY--GKLGRGGSDGCKTPMKIDS-LTGLGVIKVECGSQFSVALTKSGAVYTWGKG 4029
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE-----VMVGNSSSSNCSS 265
+ LGHG V PR+V+ L+G + + A G H E V +
Sbjct: 4030 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGL 4089
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+++TWGD D+G+LG G A P VAAL RVACG + T++ +TS
Sbjct: 4090 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTS-------- 4141
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
P GKLP +V + + ++EI+
Sbjct: 4142 -------KPTNAGKLPAQV--PMEYNHLQEIS 4164
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 168/338 (49%), Gaps = 40/338 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 2790
Query: 156 TYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G LG G +S++V K+V ++ G H +T G+
Sbjct: 2791 TN--GRLGLGLSSGTIPIPRQITALSNYVVKKV----------AVHSGGRHAMALTVDGK 2838
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 2839 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAIT------------ 2886
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVY 321
SSG+L++WG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V+
Sbjct: 2887 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2946
Query: 322 TMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G +G+LG ++G +P +E +L+ V +I CG+ LT V+TWGKG
Sbjct: 2947 SWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3005
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG P +VE L+ K++ +A G A+
Sbjct: 3006 FRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3043
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/339 (31%), Positives = 163/339 (48%), Gaps = 40/339 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG LG + ++V P +LS++ + + C E ++ SG +YT
Sbjct: 387 EVIAWG-----LLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK 441
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ + + S + K P +G H ++S S G++F++G G G L
Sbjct: 442 STTLAPMLIHSLSSRKMVKLAAHP-DGQHYLALS----------SNGEVFSWGCGDGGRL 490
Query: 216 GHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
GHGD + P + + G + V ACG ++AA+ G+L+TW
Sbjct: 491 GHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT------------VDGELYTW 538
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYG 329
G G+ GRLGHG E + P V AL VACG + T+A+T +G V++ G YG
Sbjct: 539 GRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 598
Query: 330 QLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+LG +DG K P VE KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 599 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L++ L+ K+V +A G+ A+ +H W
Sbjct: 658 EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 696
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 47/289 (16%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL----------DVQNIA 82
G+VF WG G G G LG G D++ LE ++ V +IA
Sbjct: 477 GEVFSWGCGDG-GRLGHG------------DTTY---LEEPTMIAAFNGKQAGKHVVHIA 520
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHT 140
CG ++A + GE+++WG + GRLGHG D P L+ AL + + VAC G+ T
Sbjct: 521 CGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQT 580
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AVT +G +++WGDG Y G LG G PK V L+ + + + CG + +T
Sbjct: 581 LAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTK 637
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
GQ++T+G G LGHG + V P+ +++L+G + V A G H A+ +
Sbjct: 638 DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD-------- 689
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACG 307
G++ +WG DK L H D K P + L + ++CG
Sbjct: 690 ----DGEVHSWGSNDK--LQHFDTLFSNKKQPKALPGLNSKHIVGISCG 732
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2837 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAIT 2886
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE++SWG GRLGHG ++ L PKL+ L + VACG + T A+T G ++
Sbjct: 2887 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2946
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2947 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3006
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3007 RLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3065
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3066 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3104
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3756 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 3810
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ G G G LG G +SVS P +ES++ +R V G H A+
Sbjct: 3811 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 3859
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L +A G + + +T SG ++
Sbjct: 3860 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 3918
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 3919 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 3978
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D +P +++L V + CG+ F+ A+
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVAL 4017
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 3806
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3807 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 3863
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ E++TWGKG
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 3923
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LV+AL+ +V +ACG+ +CL
Sbjct: 3924 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 3965
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2731 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2780
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 2781 --EGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 2838
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+Y+WG G
Sbjct: 2839 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKAKRIRDIACGSSHSAAITSSGELYSWGLG 2897
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P LV+ L +V +ACG+ + L
Sbjct: 2898 EYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 2939
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G L R GS G K PK +E LD+ + CG + + +
Sbjct: 587 GQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLVEKLQDLDIVKVCCGSQFSVALT 636
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V++WG+ RLGHG D V PKL+D L + VA G H A+T G++++W
Sbjct: 637 KDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 696
Query: 153 G--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G D +F L + PK + G L H+ ISCGP
Sbjct: 697 GSNDKLQHFDTLFSNKK----QPKALPG-LNSKHIVGISCGP 733
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 189/368 (51%), Gaps = 28/368 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNK 93
V WG G DG LG G D P L + L++ ++ CG H A
Sbjct: 35 VCTWGRGE-DGQLG---------HGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSES 84
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+V+SWG GRLGHG SD+ P+ I L + I+ +ACG+ H AVT+ G + +WG
Sbjct: 85 HTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWG 144
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G VP+++ +G+ + ++ G HTA VT G+L+ +G G +G
Sbjct: 145 RN--QNGQLGLGTTEDSLVPQKIQ-AFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYG 201
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG GDRK +P +V G + V ACG HT +V SSG L+T+G
Sbjct: 202 NLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISV------------SSSGGLYTYGW 249
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG- 332
G+LGHGD L+P + AL +++ G T+A+T+ G +Y G +GQ+G
Sbjct: 250 SKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGV 309
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D P +V+ L + + I+CG H +T + V++WG+G NG+LG+G+ DRN
Sbjct: 310 GDNVDRSSPVQVKLPLEQKVIL-ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRN 368
Query: 393 SPSLVEAL 400
P +++AL
Sbjct: 369 VPVIIKAL 376
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 186/349 (53%), Gaps = 18/349 (5%)
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
+A V V I+ G H+ + V +WG G+LGHG D L P ++ L + I
Sbjct: 10 TAPVRRVLLISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEII 69
Query: 132 LVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
V CG HT A + S D+Y+WG G +FG LGHGN + P+ + L G+ + I+C
Sbjct: 70 SVICGADHTIAYSESHTDVYSWGWG--DFGRLGHGNSSDLFTPQPIR-QLHGLKIKQIAC 126
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H VT GQ+ ++G G LG G + +P+++++ +G+ A G HTAAV
Sbjct: 127 GDSHCLAVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAV 186
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G+L+ WG G G LG GD++ +LVP V+ VACG
Sbjct: 187 TE------------DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRH 234
Query: 311 TVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
T+++++SG +YT G YGQLG+ AD +P+++E L SF+ +I+ G H +TS
Sbjct: 235 TISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLE-ALQGSFISQISGGWRHTMAVTSD 293
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++Y WG G++G GD DR+SP V+ +++V I+CG T A+
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAV 342
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 168/342 (49%), Gaps = 29/342 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WG G R+G G D P+ + L ++ IACG H V
Sbjct: 87 DVYSWGWGD--------FGRLG--HGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTM 136
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+G+V SWG G+LG G D L P+ I A + I++VA G HT AVT G+LY WG
Sbjct: 137 EGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWG 196
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ VP++V+ P G + ++CG HT V+S+G L+T+G +G
Sbjct: 197 WGRY--GNLGLGDRKDRLVPEKVSLP-HGEKMVMVACGWRHTISVSSSGGLYTYGWSKYG 253
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD IP ++E+L+G + + G HT AV S GKL+ WG
Sbjct: 254 QLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVT------------SDGKLYGWGW 301
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G++G GD + P V +E ++CG T+A+T +V++ G GQLGN
Sbjct: 302 NKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGN 361
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G+ +R + K+ + +CG + + + + TW
Sbjct: 362 ----GECTDRNVPVIIKALSVDGSCGQHIESSMVDSSSGKTW 399
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V T G GQLG+ A +L + L + + CG+ H
Sbjct: 19 ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+A S T+VY+WG G GRLGHG++ D +P + L ++K IACG + A+ +
Sbjct: 79 IAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACGDSHCLAVTM 136
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 144/441 (32%), Positives = 217/441 (49%), Gaps = 42/441 (9%)
Query: 8 AFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP 67
AF S S + S SG V++WG + ++G G K+ +P
Sbjct: 2679 AFNKSQQSVIQPISSVSGAKR------VYVWGLNDKE--------QLGGPKGSKI--KVP 2722
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
+A++ V L ++A G + LV + G+ ++ GE S GRLG G +V P I ALS
Sbjct: 2723 QAVDWTVSLQPISVAGGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQ 2782
Query: 128 MNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+ VA G H A+T G +++WG+G + G LGHG+ S P+ + L G V
Sbjct: 2783 HVVRKVAVHSGGRHALALTADGRVFSWGEG--DDGKLGHGDVTSLDTPRCIEA-LNGFRV 2839
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV- 244
++ G H+A VTS+G+L+T+G G +G LGHGD + P+ VESL G R V+ +CG
Sbjct: 2840 RDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSR 2899
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
T A+VE G +++WGDGD G+LG G E P V L C
Sbjct: 2900 DAQTLALVE------------GGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCH 2947
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
V CG +VALT +GHVYT G Y +LG+ + P VEG K + ++ G+ H
Sbjct: 2948 VECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVI-GVSVGALH 3006
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
+T +V+ WG +G+ G+G P+LV+ + ++ +ACG++ + A
Sbjct: 3007 CLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVA----- 3061
Query: 423 WVSGVDQSMCSGCRLPFNNFK 443
W + S+ +PF K
Sbjct: 3062 WTAPEPPSVAPPEPVPFPTIK 3082
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 206/407 (50%), Gaps = 31/407 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
W G + G G N G GV+ +P E+ L +A G + + G
Sbjct: 3608 WTAVGGGQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGR 3667
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGD 154
V++ G +GGRLG G V P L+++L ++ ++ VA G H A++ G++Y+WG+
Sbjct: 3668 VYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGE 3727
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHGN++ P R+ L G V ++CG H+A +T+ G+L+T+G G +G
Sbjct: 3728 G--EDGKLGHGNKLPCDRP-RIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGR 3784
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LGHGD P+ VE+L G R + ACG T A+ ++ G +++WG
Sbjct: 3785 LGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAI----------TDEEGGTVWSWG 3834
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + +PT + +L +V CG +VAL+ +G VYT G Y +LG
Sbjct: 3835 DGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLG 3894
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + P +V K + I+ G+ H V T + EVYTWG G+LG G T
Sbjct: 3895 HGVDEHVRRPKKVMTLQGKKVIS-ISTGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGI 3953
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLP 438
P LV AL++K++ ++CG+ T A W S C GC P
Sbjct: 3954 QKPRLVAALQNKKINRVSCGSAHTVA-----W------STCKGCSTP 3989
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 118/223 (52%), Gaps = 17/223 (7%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-- 88
ALG+++ WG+G G LG G + D PK +E+ + V ++ACG A
Sbjct: 3770 ALGELYTWGKGRY-GRLGHGDSD---------DQLKPKLVEALLGYRVMDVACGSGDAQT 3819
Query: 89 -ALVNKQ-GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
A+ +++ G V+SWG+ G+LG G P I++LS + I V CG + A++ +
Sbjct: 3820 CAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNN 3879
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G +YTWG G Y+ LGHG + PK+V L+G V SIS G H V T G+++T
Sbjct: 3880 GSVYTWGKGDYH--RLGHGVDEHVRRPKKVMT-LQGKKVISISTGALHCVVCTDQGEVYT 3936
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
+GD G LG G + PR V +L+ + R +CG HT A
Sbjct: 3937 WGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 191/383 (49%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 21 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRLSPTQLSALDDHQIV 70
Query: 80 NIACGGRH-AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H A + EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 71 SVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 130
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT+ G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 131 HCLAVTMEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAV 187
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISV-------- 239
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E LVP + AL +++ G T+ALT+ G
Sbjct: 240 ----SYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQISGGWRHTMALTSDG 295
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 296 KLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 354
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 355 GTNGQLGIGESLDRNFPKIIEAL 377
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 176/340 (51%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D L P + AL + I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHT 79
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + S ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 80 VAYSESRMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ + L P+++E L S + +I+ G H LTS ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLVPHKLE-ALGNSVISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAV 343
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 288 LVPTCVAALVEPNFCRV---ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
+ VA V P RV + G S +VAL + V + G GQLG+ A+ +L
Sbjct: 1 MTEEMVADEVTPPPRRVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQ 60
Query: 345 EGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
L + + CG+ H VA S+ EVY+WG G GRLGHG++ D +P ++AL
Sbjct: 61 LSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGI 120
Query: 404 QVKSIACGTNFTAAICL 420
++K IACG + A+ +
Sbjct: 121 RIKQIACGDSHCLAVTM 137
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 292 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFA 351
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 352 WGRGTNGQLGIGESLDRNFPKIIEALS 378
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3952 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4008
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4068
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4069 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4173
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4174 GDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4234 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4060 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4110 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4169
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4170 SWGDGDY--GKLGRGGSDGSKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4322 --KPASAGKLPAQV 4333
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3021 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3125
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3186 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLG G
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LG G + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4110 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4159
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4220 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4329
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4007
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4053
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4113
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4174 GDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G AV
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3009
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 3010 ------------VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
ALT G V++ G G+LG+ + + P +E L + +IACGS H A LT
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALT 3116
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGD + P +V+ L +V +ACGT + L
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLAL 3169
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2901 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2950
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 3010
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3011 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3067
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3068 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3117
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E VP + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3118 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3177
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3178 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3236
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3237 NRKPTLVQGLEGQKITRVACGSSHSVA 3263
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3890 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3946
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3947 YATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4006
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHG+ P RV L G+ V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4007 --EDGKLGHGSRSPCDRP-RVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4063
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4064 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4111
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4112 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4171
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4172 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4230
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4231 RPRLVAALQGKKVNRVACGSAHTLA 4255
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 169/341 (49%), Gaps = 30/341 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G V+ GE T +G LG G++ G+ +P+ + + V+ +A GGRHA
Sbjct: 2951 GKVYACGEAT-NGRLGLGISS-GTV-------PIPRQITALSSYMVKKVAVHSGGRHATA 3001
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY
Sbjct: 3002 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 3061
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ + PK V L G V ++CG T +T G +F++G
Sbjct: 3062 TWGLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3118
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + ++P+ +E L G + CG + A+ + SG +
Sbjct: 3119 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3166
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L VA G +A+T SG VY G +
Sbjct: 3167 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 3226
Query: 329 GQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GQ GN + P V+G L + +ACGS H T+
Sbjct: 3227 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3266
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 157/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G + P+ +ES ++V ++A GG H+A V
Sbjct: 3998 GEVYSWGEAE-DGKLG---------HGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVT 4047
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4048 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4107
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4108 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4164
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4165 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4212
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4213 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4259
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4260 --KPTSAGKLPAQV 4271
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 2959
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 2960 TN--GRLGLGISSGTVPIPRQITA-LSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3017 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3064
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3065 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3124
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3125 LGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3183
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3184 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3212
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 355 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYT---Q 406
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 407 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 456
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 457 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 504
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ RL HG + ++ L F +CG + T+A +G V++ G
Sbjct: 505 TWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGD 564
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 565 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 623
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 624 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4048 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4097
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4098 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4157
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4158 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4214
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4215 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPTSAGKL 4267
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3006 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3055
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3056 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3115
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3116 SWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3175
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3176 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3234
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3235 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3273
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 131/304 (43%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 430 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 482
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + RL HG + +I L
Sbjct: 483 -----HVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFI 537
Query: 132 LVACGEY--HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+CG T A +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 538 YKSCGIRFAQTLAFYENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVR 594
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 595 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 654
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 655 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 702
Query: 310 LTVA 313
+ A
Sbjct: 703 QSFA 706
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3891 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3945
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3946 LYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAV--------------NSGGKHC 3991
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG + P + +L VA G + + +T +G
Sbjct: 3992 LALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGD 4051
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4052 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4111
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4112 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4152
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3891 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3941
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3942 ---ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKG 4058
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4059 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4100
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2900 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2949
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2950 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGK 3007
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3008 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3066
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3067 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3108
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2947 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G++++ GE + GRLG G+ S + P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3056
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+++G G
Sbjct: 3057 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3113
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3114 YGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3163
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3164 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3223
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3224 GHGTDVHVRKPQMVEGLRGKKIVH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3282
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3283 NRKPTLVQGLEGQKITRVACGSSHSVA 3309
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 198/384 (51%), Gaps = 23/384 (5%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3938 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKL 3994
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I VA G H A++ G++Y+WG+
Sbjct: 3995 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEA 4054
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G+ V I+ G H+A +T++G+LFT+G G +G L
Sbjct: 4055 --EDGKLGHGNRSPCDRP-RVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRL 4111
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FTWGDG 274
GHGD + P+ V++L+G R + ACG G++ + + + ++WGDG
Sbjct: 4112 GHGDSEDQLKPKLVDALQGHRVIDVACGS-----------GDAQTLCLTDDDMVWSWGDG 4160
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G + +P + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4161 DYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG 4220
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4221 SDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4279
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4280 PRLVAALQGKKINRVACGSAHTLA 4303
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 167/327 (51%), Gaps = 44/327 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4046 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGVEVVDIAAGGAHSACIT 4095
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD--LY 150
GE+F+WG+ GRLGHG D L PKL+DAL + VACG + L+ D ++
Sbjct: 4096 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 4155
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P +++ L G+ V+ + CG + +T +G ++T+G G
Sbjct: 4156 SWGDGDY--GKLGRGGSDGCKIPMKIDS-LTGLGVTKVECGSQFSVALTKSGAVYTWGKG 4212
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4213 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4260
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4261 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4307
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIA 357
P GKLP +V + + ++EI+
Sbjct: 4308 --KPTNAGKLPAQV--PMEYNHLQEIS 4330
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 169/341 (49%), Gaps = 30/341 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G ++ GE T +G LG GL+ G+ +P+ + + V+ +A GGRHA
Sbjct: 2997 GKIYACGEAT-NGRLGLGLSS-GTI-------PIPRQITALSNYVVKKVAVHSGGRHAMA 3047
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY
Sbjct: 3048 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 3107
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
+WG G Y G LGHG+ + PK V L G V ++CG T +T G +F++G
Sbjct: 3108 SWGLGEY--GRLGHGDNATQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3164
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + +IP+ +E L G + CG + A+ + SG +
Sbjct: 3165 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 3212
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L VA G +A+T +G VY G +
Sbjct: 3213 WTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3272
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GQ GN + P V+G L + +ACGS H T+
Sbjct: 3273 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3312
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 168/338 (49%), Gaps = 40/338 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 3005
Query: 156 TYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G LG G +S++V K+V ++ G H +T G+
Sbjct: 3006 TN--GRLGLGLSSGTIPIPRQITALSNYVVKKV----------AVHSGGRHAMALTVDGK 3053
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3054 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------ 3101
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVY 321
SSG+L++WG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V+
Sbjct: 3102 SSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3161
Query: 322 TMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G +G+LG ++G +P +E +L+ V +I CG+ LT V+TWGKG
Sbjct: 3162 SWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3220
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG P +VE L+ K++ +A G A+
Sbjct: 3221 FRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3258
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 21/268 (7%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL----SNMNIELVACGEYHT 140
G+H ++ GEVFSWG GGRLGHG + + P +I A + ++ +ACG ++
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 549
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVV 198
+T+ G+LYTWG G N+G LGHG+ P V L+G+ V ++CG T V
Sbjct: 550 AVITIDGELYTWGRG--NYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAV 606
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T GQ++++GDG +G LG G P+ VE L+ L V+ CG + A+ +
Sbjct: 607 TENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------ 660
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+++TWG GD RLGHG E P + L VA G + +ALT G
Sbjct: 661 ------DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDG 714
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEG 346
V++ GS Q + ++ K P + G
Sbjct: 715 EVHSWGSNDKLQHFDTLSNKKQPKALPG 742
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 162/339 (47%), Gaps = 40/339 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG LG + ++V P +LS++ + + C E ++ SG +YT
Sbjct: 410 EVIAWG-----LLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK 464
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ + + S + K P +G H ++S S G++F++G G G L
Sbjct: 465 STTLAPMLIHSLSSRKIVKLAAHP-DGQHYLALS----------SNGEVFSWGCGDGGRL 513
Query: 216 GHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
GHGD + P + + G + V ACG ++A + G+L+TW
Sbjct: 514 GHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT------------IDGELYTW 561
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYG 329
G G+ GRLGHG E + P V AL VACG + T+A+T +G V++ G YG
Sbjct: 562 GRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 621
Query: 330 QLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+LG +DG K P VE KL + ++ CGS LT +VYTWGKG N RLGHG
Sbjct: 622 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 680
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L++ L+ K+V +A G+ A+ +H W
Sbjct: 681 EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 719
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 134/275 (48%), Gaps = 50/275 (18%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL----------DVQNIA 82
G+VF WG G G G LG G D++ LE ++ V +IA
Sbjct: 500 GEVFSWGCGDG-GRLGHG------------DATY---LEEPTMIAAFNGKQAGKHVVHIA 543
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHT 140
CG ++A++ GE+++WG + GRLGHG D P L+ AL + + VAC G+ T
Sbjct: 544 CGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQT 603
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AVT +G +++WGDG Y G LG G PK V L+ + + + CG + +T
Sbjct: 604 LAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTK 660
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
GQ++T+G G LGHG + V P+ +++L+G + V A G H A+ +
Sbjct: 661 DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD-------- 712
Query: 261 SNCSSGKLFTWGDGDKGRLGHGD-----KEAKLVP 290
G++ +WG DK L H D K+ K +P
Sbjct: 713 ----DGEVHSWGSNDK--LQHFDTLSNKKQPKALP 741
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 119/279 (42%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3052 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3101
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE++SWG GRLGHG ++ L PKL+ L + VACG + T A+T G ++
Sbjct: 3102 SSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3161
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3162 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3221
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG +V P+ V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 3222 RLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3280
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3281 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVTTPS 3319
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3939 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPTEALATLRPVQLIG---GEQTLFAVTADGK 3993
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ G G G LG G +SVS P +ES++ +R V G H A+
Sbjct: 3994 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 4042
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L +A G + + +T SG ++
Sbjct: 4043 -SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELF 4101
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 4102 TWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGD 4161
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVAL 4200
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3939 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT--------- 3989
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3990 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4046
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ E++TWGKG
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4106
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LV+AL+ +V +ACG+ +CL
Sbjct: 4107 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4148
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2946 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2995
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 2996 --EGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 3053
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+Y+WG G
Sbjct: 3054 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLG 3112
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P LV+ L +V +ACG+ + L
Sbjct: 3113 EYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3154
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G L R GS G K PK +E LD+ + CG + + +
Sbjct: 610 GQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLVEKLQDLDIVKVCCGSQFSVALT 659
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V++WG+ RLGHG D V PKL+D L + VA G H A+T G++++W
Sbjct: 660 KDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 719
Query: 153 G--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G D +F L + + PK + G H+ ISCGP
Sbjct: 720 GSNDKLQHFDTLSNKKQ-----PKALPGL---KHIVGISCGP 753
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2954 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3063
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3064 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3120
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3121 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3170
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3171 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3230
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3231 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3289
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3290 NRKPTLVQGLEGQKITRVACGSSHSVA 3316
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 161/304 (52%), Gaps = 21/304 (6%)
Query: 119 PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P L++++ ++ I+ VA G H A++ G++Y+WG+ G LGHGN P RV
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA--EDGKLGHGNRSPCDRP-RV 4026
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L GI V ++ G H+A VT+AG L+T+G G +G LGH D + P+ VE+L+G R
Sbjct: 4027 IESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR 4086
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
V ACG + + C +++WGDGD G+LG G + VP +
Sbjct: 4087 VVDIACG------------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKID 4134
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFV 353
+L +V CG +VALT SG VYT G Y +LG+ D + P +V+G K +
Sbjct: 4135 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4194
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
IA GS H T EVYTWG G+LG G T+ P LV AL+ K+V +ACG+
Sbjct: 4195 -AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSA 4253
Query: 414 FTAA 417
T A
Sbjct: 4254 HTLA 4257
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3004 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3056
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3057 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3116
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3117 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3173
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3174 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3221
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3222 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3281
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3282 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3319
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 150/302 (49%), Gaps = 19/302 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
S P LES + ++ +A GG+H ++ +GEV+SWGE G+LGHG S P++I
Sbjct: 3968 STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVI 4027
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L + + VA G H+ VT +GDLYTWG G Y G LGH + PK V L+G
Sbjct: 4028 ESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQG 4084
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
V I+CG T +T ++++GDG +G LG G +P +++SL GL V+
Sbjct: 4085 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4144
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P V L
Sbjct: 4145 ECGSQFSVALTK------------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4192
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G V T G VYT G GQLG+ + R+ L V +ACGS
Sbjct: 4193 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGS 4252
Query: 361 YH 362
H
Sbjct: 4253 AH 4254
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2937 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2994
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 2995 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3051
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3108
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3109 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3159
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3160 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3218
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3219 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3265
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4050 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4099
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4100 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4159
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4160 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4216
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4217 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4269
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3059 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3108
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3109 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3168
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3169 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3228
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3229 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3287
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3288 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3326
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC----SSGKLFTWGDGDK 276
+SVS P +ES++ + + A NS +C S G++++WG+ +
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLALSSEGEVYSWGEAED 4010
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
G+LGHG++ P + +L VA G + + +T +G +YT G YG+LG+ +
Sbjct: 4011 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDS 4070
Query: 337 DGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+ +L ++ L V +IACGS LT V++WG G G+LG G +D P
Sbjct: 4071 EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVP 4130
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
+++L V + CG+ F+ A+
Sbjct: 4131 MKIDSLTGLGVVKVECGSQFSVAL 4154
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2953 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3002
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3003 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3060
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3061 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3119
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3120 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3161
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%)
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+AL++ G VY+ G G+LG+ RV L V ++A G H A +T+ +
Sbjct: 3994 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4053
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+YTWGKG GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4054 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4102
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 203/389 (52%), Gaps = 27/389 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D + GGL G K+ LP E L +IA G + +V+++
Sbjct: 2591 VYVWGLNDKDQL--GGLK------GSKI--KLPIYSEVLSKLKPIHIAGGSKTLFIVSQE 2640
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G D++V PK I LS I+ VA G H A+T G +++W
Sbjct: 2641 GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 2700
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN +S PK + L+ + I+CG H+A + S G+L+T+G G +
Sbjct: 2701 GEG--EDGKLGHGNCISLDKPKLIE-ILKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 2757
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + + P+ V++L G R V+ ACG + + + G +++WG
Sbjct: 2758 GRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTM----------ALTTDGCVYSWG 2807
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P V L +V CG ++ALT G V+T G Y +LG
Sbjct: 2808 DGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG 2867
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P VEG K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2868 HGNDHHVRKPTLVEGLRGKKII-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVN 2926
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L+D +V ++CG++ + A L
Sbjct: 2927 RKPSLVHDLEDARVNRVSCGSSHSIAWVL 2955
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 164/334 (49%), Gaps = 29/334 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE--SAVVLDVQNIACGGRHAAL 90
G ++ GEGT +G LG G + PKA+ S V+ + GG+HA
Sbjct: 2641 GKLYACGEGT-NGRLG---------LGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALA 2690
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ + G+VFSWGE G+LGHG + PKLI+ L + I +ACG H+ A+ +G+LY
Sbjct: 2691 LTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELY 2750
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ ++ PK V L G V ++CG T +T+ G ++++G
Sbjct: 2751 TWGLGEY--GRLGHGDTITQTRPKLVQA-LVGQRVVQVACGSRDAQTMALTTDGCVYSWG 2807
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G P V+ L GL ++ CG + A+ + G++
Sbjct: 2808 DGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKY------------GEV 2855
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG+ PT V L VA G +A+T +G VY G +
Sbjct: 2856 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 2915
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GQ GN + L + V ++CGS H
Sbjct: 2916 GQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSH 2949
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 173/337 (51%), Gaps = 41/337 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG G + G+G P D ++ + I+ + C E ++L+G+ Y
Sbjct: 79 EVLAWG---GVKFGNGST-----PFYCDPIAGLGIKQLCCTERSLMILSLNGNAYN---- 126
Query: 156 TYNFGLLGHGNEVSHWVPKRVNG----PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
+ HG+E + P RV+G P+ I +S + G H +T G ++++G+G
Sbjct: 127 ------MYHGSETQY--PLRVHGFSDKPITMI--ASHADGK-HYLALTQDGCVYSWGNGD 175
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHGD S P+ +ESL V ACG ++AA+ +SG+L+TW
Sbjct: 176 GGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAAL------------SASGELYTW 223
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYG 329
G G+ GRLGHG+ + L PT V L VACG S T+ +T SG V++ G YG
Sbjct: 224 GRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYG 283
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
+LG DG ++ KL V ++ CG A LT+ EVYTWGKG RLGHG +
Sbjct: 284 KLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEE 343
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
P ++E+L+DK++K ++ GT A+ ++V G
Sbjct: 344 HVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYG 380
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 167/331 (50%), Gaps = 21/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+Q V+ WG +LG S + P + LS + +A G V+ G LY
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 2646
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGD 209
G+GT G LG G++ + PK + P I ++ G H +T G++F++G+
Sbjct: 2647 GEGTN--GRLGLGDDNNVCEPKAI--PFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGE 2702
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGHG+ S+ P+ +E LK R ACG H+AA+ S+G+L+
Sbjct: 2703 GEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAI------------ASNGELY 2750
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHGD + P V ALV +VACG + T+ALTT G VY+ G
Sbjct: 2751 TWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGD 2810
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+G+LG +DG +L+ V ++ CG+ LT EV+TWGKG RLGHG+
Sbjct: 2811 FGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 2870
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P+LVE L+ K++ +A G A+
Sbjct: 2871 DHHVRKPTLVEGLRGKKIIHVAVGALHCLAV 2901
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 181/373 (48%), Gaps = 30/373 (8%)
Query: 59 GVKM-DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
GVK + S P + L ++ + C R +++ G ++ + HG S+
Sbjct: 85 GVKFGNGSTPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYN--------MYHG--SETQ 134
Query: 118 HPKLIDALSNMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
+P + S+ I ++A H A+T G +Y+WG+G + G LGHG+ VS+ PK
Sbjct: 135 YPLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNG--DGGRLGHGDTVSYDEPKL 192
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
+ L+ ++ I+CG ++A ++++G+L+T+G G +G LGHG+ V P V +LKG
Sbjct: 193 IESLLDK-NIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGH 251
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
V ACG S + C +SG +F+WGDGD G+LG G + P V
Sbjct: 252 TVVHVACG------------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIV 299
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
L++ N +V CG + ALT G VYT G +LG+ + +V L +
Sbjct: 300 DKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKI 359
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
++++ G+ H+ LT VY WG+ G++ + P+L L K V +A G
Sbjct: 360 KDLSVGTTHILALTEDQFVYGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPT 419
Query: 414 FTAAICLHKWVSG 426
+ A C+ W G
Sbjct: 420 QSFAWCMSAWSGG 432
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 115/273 (42%), Gaps = 63/273 (23%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG G +C + +D PK +E +++IACG H+A +
Sbjct: 2695 GKVFSWGEGE-DGKLGHG-----NC--ISLDK--PKLIEILKSKRIRDIACGSGHSAAIA 2744
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG PKL+ AL + VACG + T A+T G +Y
Sbjct: 2745 SNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVY 2804
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2805 SWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYF 2864
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHGN+ P V G L G + ++ G H VT GQ++ +GD G G+G
Sbjct: 2865 RLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGAT 2923
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
P V L+ R R +CG H+ A V V
Sbjct: 2924 SVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLV 2956
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 8/169 (4%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GKL+ G+G GRLG GD P + L + +VA G +ALT G V++
Sbjct: 2641 GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 2700
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ ++ L + +IACGS H A + S E+YTWG G GRL
Sbjct: 2701 GEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRL 2760
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTN------FTAAICLHKWVSG 426
GHGDT + P LV+AL ++V +ACG+ T C++ W G
Sbjct: 2761 GHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDG 2809
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 8/179 (4%)
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSL 310
+V + S+ + ++ WG DK +LG G K +K+ +P L + +A G
Sbjct: 2575 QVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPIYSEVLSKLKPIHIAGGSKT 2633
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTS 368
++ G +Y G G+LG + + LS+ ++++A G H LT
Sbjct: 2634 LFIVSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQ 2693
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+V++WG+G +G+LGHG+ + P L+E LK K+++ IACG+ +AAI L+ W
Sbjct: 2694 DGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTW 2752
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 554 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 603
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 663
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 664 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 720
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 721 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 770
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 771 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 830
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 831 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 889
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 890 NRKPTLVQGLEGQKITRVACGSSHSVA 916
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 1543 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 1599
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 1600 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 1659
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 1660 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 1716
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 1717 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 1764
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 1765 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 1824
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 1825 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1883
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 1884 RPRLVAALQGKKVNRVACGSAHTLA 1908
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 604 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 656
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 657 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 716
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 717 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 773
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 774 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 821
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 822 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 881
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 882 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 919
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 1651 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 1700
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 1701 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 1760
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 1761 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1817
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 1818 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 1865
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 1866 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 1912
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 1913 --KPASAGKLPAQV 1924
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 537 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 594
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 595 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 651
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 708
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 709 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 759
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 760 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 818
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 819 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 865
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 1701 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 1750
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 1751 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 1810
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 1811 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 1867
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 1868 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 1920
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 659 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 708
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 709 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 768
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 769 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 828
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 829 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 887
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 888 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 926
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 1544 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 1598
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 1599 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 1644
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 1645 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 1704
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 1705 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 1764
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 1765 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1805
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 1544 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 1594
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 1595 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1711
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 1712 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 1753
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 553 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 602
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 603 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 660
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 661 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 719
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 720 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 761
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2250 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2359
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 2360 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2416
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2417 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2466
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2467 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2526
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2527 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 2585
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 2586 NRKPTLVQGLEGQKITRVACGSSHSVA 2612
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3239 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3295
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3296 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3355
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3356 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3412
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 3413 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 3460
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3461 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3520
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3521 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3579
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 3580 RPRLVAALQGKKVNRVACGSAHTLA 3604
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2300 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 2352
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 2353 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2412
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 2413 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2469
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 2470 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2517
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 2518 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 2577
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 2578 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2615
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3347 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 3396
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 3397 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 3456
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3457 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3513
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3514 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3561
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3562 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3608
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 3609 --KPASAGKLPAQV 3620
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2233 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2290
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 2291 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2347
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 2404
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 2405 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2455
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 2456 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2514
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 2515 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2561
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 3397 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 3446
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3447 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3506
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 3507 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3563
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 3564 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 3616
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2355 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 2404
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2405 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2464
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2465 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2524
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 2525 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 2583
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 2584 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2622
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3240 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3294
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3295 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3340
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3341 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 3400
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 3401 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 3460
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 3461 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3501
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3240 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3290
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3291 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3407
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 3408 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3449
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2249 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 2297
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2298 -VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2356
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 2357 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 2415
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2416 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2457
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2966 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3075
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3076 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3132
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3133 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3182
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3183 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3242
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3243 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3302 NRKPTLVQGLEGQKITRVACGSSHSVA 3328
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3955 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4011
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4071
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4072 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4128
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4129 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4176
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4237 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4296 RPRLVAALQGKKVNRVACGSAHTLA 4320
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3016 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3068
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3069 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3128
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3129 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3185
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3186 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3233
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3234 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3293
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3294 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3331
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4063 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4112
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4113 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4172
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4173 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4324
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4325 --KPASAGKLPAQV 4336
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2949 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3006
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3007 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3063
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3120
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3121 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3171
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3172 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3230
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3231 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3277
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 421
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 422 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 471
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 472 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 519
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 580 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 639 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 445 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 497
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 498 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 552
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 553 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 609
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 669
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 670 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 717
Query: 310 LTVA 313
+ A
Sbjct: 718 QSFA 721
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4113 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4162
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4222
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4223 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4332
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3071 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3120
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3121 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3180
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3181 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3240
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3241 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3299
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3300 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3338
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4056
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4116
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4117 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4123
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4124 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4165
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2965 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3014
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3015 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3072
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3073 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3131
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3132 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3173
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2186 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2235
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2295
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 2296 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2352
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2353 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2402
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2403 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2462
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2463 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 2521
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 2522 NRKPTLVQGLEGQKITRVACGSSHSVA 2548
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2236 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 2288
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 2289 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2348
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 2349 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2405
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 2406 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2453
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 2454 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2513
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 2514 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2551
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 193/385 (50%), Gaps = 26/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3177 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKL 3233
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3234 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3293
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3294 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3350
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ V++L+G R V ACG + + C +++WGD
Sbjct: 3351 GHSDSEDQLKPKLVDALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 3398
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3399 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3458
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T YTWG G+LG G T+
Sbjct: 3459 GSDDHVRRPRQVQGLQGKKVIA-IATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQ 3516
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 3517 RPRLVAALQGKKVNRVACGSAHTLA 3541
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 157/314 (50%), Gaps = 43/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3285 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 3334
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL+DAL + VAC G+ T +T ++
Sbjct: 3335 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVW 3394
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3395 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3451
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H C+ +T
Sbjct: 3452 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC-------------CTEDGSYT 3498
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3499 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3545
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 3546 --KPASAGKLPAQV 3557
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 2244
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 2245 TN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 2302 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 2349
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 2350 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 2409
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 2410 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2468
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 2469 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 2497
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 2233
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G+++ G+ T G LG G +V IPR++ +L + A H+ G
Sbjct: 2234 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV---HSG-------GRH 2283
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+++ GK+F+WG+GD G+LGH + P + AL +ACG S + ALT+SG
Sbjct: 2284 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 2343
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+YT G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 2344 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2403
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 2404 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 2445
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2291 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 2340
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2341 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2400
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2401 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2460
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 2461 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 2519
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 2520 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2558
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 119/240 (49%), Gaps = 23/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +++ V ++ACG A
Sbjct: 3335 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVDALQGHRVVDVACGSGDAQT 3384
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3385 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3444
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G +T+G
Sbjct: 3445 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGS-YTWG 3500
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 3501 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 3553
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 3178 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 3234
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3235 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLA 3280
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G +Y
Sbjct: 3281 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 3340
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 3341 TWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3400
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 3401 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3439
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3178 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 3228
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3229 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3285
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3286 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3345
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LV+AL+ +V +ACG+ +CL
Sbjct: 3346 RYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCL 3387
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2185 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2234
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2235 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2292
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 2293 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 2351
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2352 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2393
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2713 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2822
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 2823 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2879
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2880 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2929
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2930 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2989
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2990 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3048
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3049 NRKPTLVQGLEGQKITRVACGSSHSVA 3075
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3702 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKL 3758
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3759 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3818
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3819 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3875
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 3876 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 3923
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3924 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3983
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3984 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4042
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4043 RPRLVAALQGKKVNRVACGSAHTLA 4067
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2763 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 2815
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 2816 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2875
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 2876 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2932
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 2933 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2980
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 2981 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3040
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3041 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3078
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3810 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 3859
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 3860 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 3919
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3920 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3976
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3977 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4024
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4025 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4071
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4072 --KPASAGKLPAQV 4083
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2696 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2753
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 2754 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2810
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 2867
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 2868 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2918
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 2919 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2977
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 2978 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 164/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P L+N+ + +AC E V +G + T
Sbjct: 401 EVKGWG-----LIGWKYYANVIGPIQCKGLANLGVTQIACAEKRLLIVXRNGRVXT---Q 452
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L VP+ V G L +V I+ H + + G+++++G G
Sbjct: 453 AYNSDTL---------VPQLVQG-LASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGR 502
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 503 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 550
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 551 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 610
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 611 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 669
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 670 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 710
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 38/313 (12%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES----A 73
+ H DG A G+V+ WG G G R+G V ++ PK + +
Sbjct: 476 AAHSDGHHYLALAATGEVYSWGCGDG--------RRLGHGDTVPLEE--PKVISAFSGKQ 525
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V
Sbjct: 526 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 585
Query: 134 AC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
AC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V + CG
Sbjct: 586 ACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCG 642
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ +T GQ++++G G LGHG + V P+ +E L+G + + A G H A+
Sbjct: 643 SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 702
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E ++ +WG D+ + + K P + L + +ACG + +
Sbjct: 703 E------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS 750
Query: 312 VALTTSGHVYTMG 324
A +S + ++MG
Sbjct: 751 SA-GSSXYEWSMG 762
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 3860 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 3909
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3910 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3969
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 3970 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4026
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4027 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4079
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2818 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 2867
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2868 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2927
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2928 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2987
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 2988 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3046
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3085
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3703 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLLAVTADGK 3757
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3758 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3803
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3804 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 3863
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 3864 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 3923
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 3924 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3964
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3703 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVT--------- 3753
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3754 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3810
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3870
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 3871 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3912
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2712 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2761
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2762 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2819
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 2820 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 2878
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2879 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2920
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3953 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4009
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4069
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4070 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4174
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4235 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3289
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4061 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4110
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4111 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4170
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4171 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4275
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4323 --KPASAGKLPAQV 4334
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2945 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G I +++ S G H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4111 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4160
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4220
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4221 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4330
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4008
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4054
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4114
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4174
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4004
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2967 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3076
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3077 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3133
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3134 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3183
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3184 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3243
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3244 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3302
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3303 NRKPTLVQGLEGQKITRVACGSSHSVA 3329
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3957 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4013
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4014 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4073
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4074 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4130
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4131 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4178
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4179 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4238
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4239 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4297
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4298 RPRLVAALQGKKVNRVACGSAHTLA 4322
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3017 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3069
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3070 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3129
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3130 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3186
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3187 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3234
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3235 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3294
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3295 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3332
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4065 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4114
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4115 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4174
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4175 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4231
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4232 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4279
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4280 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4326
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4327 --KPASAGKLPAQV 4338
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2966 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3025
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3026 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3082
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3083 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3130
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3131 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3190
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3191 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3249
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3250 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3278
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 430 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 481
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 482 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 531
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 532 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 579
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 580 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 639
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 640 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 698
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 699 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 739
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 505 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 557
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 558 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 612
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 613 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 669
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 670 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 729
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 730 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPA 777
Query: 310 LTVA 313
+ A
Sbjct: 778 QSFA 781
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4115 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4164
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4165 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4224
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4225 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4281
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4282 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4334
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3072 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3121
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3122 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3181
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3182 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3241
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3242 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3300
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3301 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3339
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3958 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4012
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4013 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4058
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4059 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4118
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4119 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4178
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4179 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4219
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3958 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4008
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4009 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4125
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4126 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4167
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G + ++
Sbjct: 2955 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLF 3011
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
V V GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 3012 AVTV---------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 3062
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
ALT G V++ G G+LG+ + + P +E L + +IACGS H A LT
Sbjct: 3063 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALT 3121
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3122 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3174
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2657 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2766
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 2767 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2823
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2824 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2873
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2874 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2933
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2934 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 2992
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 2993 NRKPTLVQGLEGQKITRVACGSSHSVA 3019
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3646 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3702
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3703 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3762
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3763 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3819
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 3820 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 3867
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3868 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3927
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3928 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3986
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 3987 RPRLVAALQGKKVNRVACGSAHTLA 4011
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2707 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 2759
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 2760 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2819
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 2820 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2876
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 2877 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2924
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 2925 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 2984
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 2985 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3022
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3754 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 3803
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 3804 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 3863
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3864 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3920
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3921 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3968
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3969 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4015
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4016 --KPASAGKLPAQV 4027
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2640 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2697
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 2698 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 2754
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 2811
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 2812 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 2862
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 2863 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2921
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 2922 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2968
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 3804 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 3853
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3854 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3913
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 3914 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3970
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 3971 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4023
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2762 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 2811
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2812 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2871
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2872 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2931
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 2932 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 2990
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 2991 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3029
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 17/182 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 446
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 447 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 504
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + A
Sbjct: 505 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 564
Query: 242 CG 243
CG
Sbjct: 565 CG 566
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3647 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3701
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3702 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3747
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3748 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 3807
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 3808 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 3867
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 3868 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3908
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3647 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3697
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3698 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3814
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 3815 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3856
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2656 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2705
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2706 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 2763
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 2764 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 2822
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2823 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2864
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 164/422 (38%), Gaps = 117/422 (27%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 379 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 430
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 431 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 480
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 481 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 528
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG----HSLTVALTTSGHVYTMGS 325
TWG G+ GRLGHG E + +P VA L VACG +L V + + +
Sbjct: 529 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENETTRLSVLWR 588
Query: 326 PV--------------YGQLG-----------NPQADGKLPNRV--------EGKL---- 348
V Y QLG PQ D K V EG++
Sbjct: 589 SVLGILCVSGVVESFRYNQLGVGCRCRQRGWEPPQEDLKFFYGVLTRDVMLREGQIVFEA 648
Query: 349 ------------SKSFVEEIAC-----------------GSYHVAVLTSKTEVYTWGKGA 379
K + I C GS H LT +EV++W G+
Sbjct: 649 GRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKKVIDVAAGSTHCLALTEDSEVHSW--GS 706
Query: 380 NGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRL 437
N + H DT + P+ + L K + I CG + A W S + S+ G R+
Sbjct: 707 NDQCQHFDTLRVTKPEPAALPGLDAKHIMGITCGPAQSCA-----WSSCSEWSI--GLRV 759
Query: 438 PF 439
PF
Sbjct: 760 PF 761
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 454 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 506
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 507 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 561
Query: 132 LVAC--GEYHTCAVT 144
VAC G+ T AVT
Sbjct: 562 DVACGSGDAQTLAVT 576
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3981 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4037
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4038 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4097
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4098 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4154
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4155 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4202
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4203 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4262
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4263 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4321
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4322 RPRLVAALQGKKVNRVACGSAHTLA 4346
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4089 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4138
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4139 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4198
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4199 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4255
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4256 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4303
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4304 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4350
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4351 --KPASAGKLPAQV 4362
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4139 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4188
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4189 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4248
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4249 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4305
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4306 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4358
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3982 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4036
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4037 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4082
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4083 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4142
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4143 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4202
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4203 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4243
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3982 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4032
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4033 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4149
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4150 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4191
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 3028 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3137
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3138 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3194
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3195 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3244
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3245 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3304
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3305 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3363
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3364 NRKPTLVQGLEGQKITRVACGSSHSVA 3390
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 4018 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4074
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4075 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4134
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4135 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4191
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4192 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4239
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4240 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4299
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4300 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4358
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4359 RPRLVAALQGKKVNRVACGSAHTLA 4383
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3078 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3130
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3131 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3190
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3191 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3247
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3248 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3295
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3296 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3355
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3356 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3393
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4126 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4175
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4176 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4235
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4236 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4292
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4293 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4340
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4341 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4387
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4388 --KPASAGKLPAQV 4399
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3086
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3087 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3143
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3144 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3191
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3192 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3251
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3252 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3310
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3311 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3339
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 493 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 544
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 545 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 594
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 595 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 642
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 643 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 702
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 703 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 761
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 762 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 802
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 568 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 620
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 621 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 675
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 676 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 732
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 733 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 792
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 793 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPA 840
Query: 310 LTVA 313
+ A
Sbjct: 841 QSFA 844
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4176 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4225
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4226 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4285
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4286 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4342
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4343 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4395
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3133 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3182
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3183 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3242
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3243 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3302
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3303 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3361
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3362 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3400
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 4019 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4073
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4074 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4119
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4120 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4179
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4180 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4239
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4240 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4280
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 4019 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4069
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4070 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4186
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4187 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4228
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G AV
Sbjct: 3016 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT 3075
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 3076 ------------VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 3123
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
ALT G V++ G G+LG+ + + P +E L + +IACGS H A LT
Sbjct: 3124 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALT 3182
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3183 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3235
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2963 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3012
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3072
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3073 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3129
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3130 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3179
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3180 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3239
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3240 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3298
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3299 NRKPTLVQGLEGQKITRVACGSSHSVA 3325
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3954 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKL 4010
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4011 YATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4070
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4071 --EDGKLGHGNRSPCDRP-RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4127
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4128 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4175
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4176 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4235
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4236 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 193/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYT----------QAYNSDALAPQLVQGLA 492
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 493 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + IP V LKGL+ + A
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVA 610
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG ++ALT G VY+ G +LG+ + + P +EG K ++ +A
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EV++WG +N + H DT + PS + L K + IACG +
Sbjct: 718 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG GL S V + + AL S VV V + GGRHA +
Sbjct: 3013 GKVYACGEAT-NGRLGLGL----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3065
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3066 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3125
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3126 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3182
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3183 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3230
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3231 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3290
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3291 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3328
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4062 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVVESLRGIEVVDVAAGGAHSACVT 4111
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4112 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4171
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4172 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4228
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4229 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4276
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4277 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4323
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4324 --KPTSTGKLPAQV 4335
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 174/343 (50%), Gaps = 24/343 (6%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2950 AAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3007
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVV 198
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H +
Sbjct: 3008 AVTVEGKVYACGEATN--GRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3064
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3065 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------- 3117
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTT 316
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+ALT
Sbjct: 3118 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3172
Query: 317 SGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT V+TW
Sbjct: 3173 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3231
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3232 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3274
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 169/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + +AC E ++ SG +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G I +++ S G H + + G+++++G G G
Sbjct: 477 AYNSDALA---------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E +++P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 152/328 (46%), Gaps = 43/328 (13%)
Query: 2 KAMAMDAFRVSLSSAVSSSS--QGSGHDDGD------ALGDVFIWGEGTGDGVLGGGLN- 52
+A DA L ++S + + + H DG A G+V+ WG G G G LG G
Sbjct: 476 QAYNSDALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTV 534
Query: 53 -----RVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR 107
+V S F K V +IACG ++A + +GE+++WG + GR
Sbjct: 535 PLEEPKVISAFSGKQAGK-----------HVVHIACGSTYSAAITAEGELYTWGRGNYGR 583
Query: 108 LGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHG 165
LGHG D + P L+ L + + VAC G+ T AVT +G +++WGDG Y G LG G
Sbjct: 584 LGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRG 641
Query: 166 NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
PK + L+ + V + CG + +T GQ++++G G LGHG + V
Sbjct: 642 GSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRY 700
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P+ +E L+G + + A G H A+ E ++ +WG D+ + +
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLRV 748
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVA 313
K P+ + L + +ACG + + A
Sbjct: 749 TKPEPSALPGLDTKHIVGIACGPAQSFA 776
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4112 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4161
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4162 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4221
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4222 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4279 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPTSTGKL 4331
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3068 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3117
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3118 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3177
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3178 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3237
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3238 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3296
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3297 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3335
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 3955 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 4011
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4012 ATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAV--------------NSGGKHCLA 4057
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P V +L VA G + + +T +G +Y
Sbjct: 4058 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V +IACGS LT V++WG G
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4178 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4216
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4005
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4006 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEG 4062
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2962 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3011
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3012 --EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3069
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3070 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3128
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3129 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3170
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 167/307 (54%), Gaps = 17/307 (5%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV+SWG+ G+LGHG + P+L+ A N+ V+CG HT + +G+++T+G G
Sbjct: 7 EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRG 66
Query: 156 TYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
NFG LG G V+ V P V+ L+G HV ++CG HT + GQL+T+G G +G
Sbjct: 67 --NFGQLGQGASVTANVSTPALVS-ALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYG 123
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD + P+ VESL+G A G +H++ ++E G L TWG
Sbjct: 124 RLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE------------GGNLLTWGG 171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G G+LGHGD+ + P V + + VACG T+ LT S V+T GS +G+LG
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGI 231
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ + L V I+ G +H A LTS+ +YTWG G G+LGHGD + +N
Sbjct: 232 GDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNI 291
Query: 394 PSLVEAL 400
P +VE +
Sbjct: 292 PVVVEVI 298
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 171/315 (54%), Gaps = 28/315 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V+ WG+G L ++G G + P+ + + + +V+ ++CG +H A++ +
Sbjct: 7 EVYSWGQGV--------LGQLGH--GDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILME 56
Query: 94 QGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEVF++G + G+LG G V ++V P L+ AL +++ VACG +HTCA+ +G LYT
Sbjct: 57 NGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYT 116
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG G Y G LGHG+EV PK V L+G V+ ++ G +H++V+ G L T+G G
Sbjct: 117 WGSGEY--GRLGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGY 173
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
FG LGHGD P+ V+ ++ ACG HT + + S +++TW
Sbjct: 174 FGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQ------------SQEVWTW 221
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+ G+LG GD+E P + AL ++ G + ALT+ G +YT G GQL
Sbjct: 222 GSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQL 281
Query: 332 GNPQADGK-LPNRVE 345
G+ + + +P VE
Sbjct: 282 GHGDENSQNIPVVVE 296
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 154/286 (53%), Gaps = 23/286 (8%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
++Y+WG G G LGHG+E + P+ V L G +V +SCG HTA++ G++FTF
Sbjct: 7 EVYSWGQGV--LGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGEVFTF 63
Query: 208 GDGTFGVLGHGD--RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G G FG LG G +VS P V +L+G + ACG HT A+++ +
Sbjct: 64 GRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALID------------N 111
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+L+TWG G+ GRLGHGD+ + P V +L VA G + + G++ T G
Sbjct: 112 GQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGG 171
Query: 326 PVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+GQLG+ + D K P V+G + + E+ACG++H +LT EV+TWG G G+LG
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKG-VQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLG 230
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSG 426
GD + P ++ AL+ V I+ G +AA+ L+ W G
Sbjct: 231 IGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGG 276
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 23/264 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF +G G ++G V + S P + + V+ +ACG H +
Sbjct: 58 GEVFTFGRGN--------FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALI 109
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G++++WG GRLGHG + PKL+++L + VA G +H+ + G+L TW
Sbjct: 110 DNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTW 169
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G FG LGHG+E PK V G + I ++CG HT ++T + +++T+G G F
Sbjct: 170 GGGY--FGQLGHGDETDRKTPKMVKGVQQCI-AHEVACGTHHTLMLTQSQEVWTWGSGEF 226
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG GD + + P + +L+G+ + + G +H+AA+ S G L+TWG
Sbjct: 227 GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALT------------SEGVLYTWG 274
Query: 273 DGDKGRLGHGDKEAKLVPTCVAAL 296
GDKG+LGHGD+ ++ +P V +
Sbjct: 275 GGDKGQLGHGDENSQNIPVVVEVI 298
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+EVY+WG+G G+LGHGD + P LV A V+ ++CG TA +
Sbjct: 6 SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAIL 54
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3008
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3009 -VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2960 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3069
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3070 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3126
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3127 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3176
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3177 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3236
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3237 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3295
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3296 NRKPTLVQGLEGQKITRVACGSSHSVA 3322
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 194/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + A
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG +VALT G VY+ G +LG+ + + P +EG K ++ +A
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EV++WG +N + H DT + PS + L K + IACG +
Sbjct: 718 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 194/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3951 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKL 4007
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4008 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4067
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4068 --EDGKLGHGNRSPCDRP-RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4124
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4125 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4172
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4173 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4232
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H + EVYTWG G+LG G T+
Sbjct: 4233 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4291
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4292 RPRLVAALQGKKVNRVACGSAHTLA 4316
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3010 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3062
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3063 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3122
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3123 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3179
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3180 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3227
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3228 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3287
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3288 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3325
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 164/326 (50%), Gaps = 44/326 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES +V ++A GG H+A V
Sbjct: 4059 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGTEVVDVAAGGAHSACVT 4108
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4109 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4168
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4169 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4225
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4226 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYT 4273
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4274 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4320
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEI 356
P + GKLP V+ + + ++EI
Sbjct: 4321 --KPASAGKLP--VQVPMEYNHLQEI 4342
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2943 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3000
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3001 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3057
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3114
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3115 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3165
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3166 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3224
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3225 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3271
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P+ + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3065 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3114
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3115 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3174
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3175 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3234
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3235 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3293
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3294 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3332
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4109 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4158
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4159 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4218
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H + G+++T+G
Sbjct: 4219 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4275
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4276 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4328
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 3952 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 4008
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4009 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLA 4054
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G +Y
Sbjct: 4055 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4114
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 4115 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4174
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4175 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4213
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3952 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4002
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4003 ---ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L + V ++A G H A +T+ ++YTWGKG
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4119
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4120 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2959 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3008
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3009 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3066
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3067 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3125
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3126 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3167
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 194/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + A
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG ++ALT G VY+ G +LG+ + + P +EG K ++ +A
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EV++WG +N + H DT + PS + L K + IACG +
Sbjct: 718 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 194/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3952 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKL 4008
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4009 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4068
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4069 --EDGKLGHGNRSPCDRP-RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4173
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H + EVYTWG G+LG G T+
Sbjct: 4234 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3289
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 164/326 (50%), Gaps = 44/326 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES +V ++A GG H+A V
Sbjct: 4060 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGTEVVDVAAGGAHSACVT 4109
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4110 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4169
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4170 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYT 4274
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEI 356
P + GKLP V+ + + ++EI
Sbjct: 4322 --KPASAGKLP--VQVPMEYNHLQEI 4343
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2945 IRRKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P+ + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4110 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4159
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H + G+++T+G
Sbjct: 4220 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4276
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4329
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 4009
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4010 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLA 4055
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G +Y
Sbjct: 4056 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4115
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 4116 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4003
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L + V ++A G H A +T+ ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4162
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2939 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3048
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3049 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3105
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3106 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3155
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3156 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3215
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3216 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3274
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3275 NRKPTLVQGLEGQKITRVACGSSHSVA 3301
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3930 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3986
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3987 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4046
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4047 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4103
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4104 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4151
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4152 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4211
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4212 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4270
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4271 RPRLVAALQGKKVNRVACGSAHTLA 4295
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2989 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3041
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3042 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3101
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3102 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3158
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3159 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3206
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3207 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3266
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3267 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3304
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4038 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4087
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4088 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4147
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4148 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4204
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4205 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4252
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4253 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4299
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4300 --KPASAGKLPAQV 4311
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2922 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2979
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 2980 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3036
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3093
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3094 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3144
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3145 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3203
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3204 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3250
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 402 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 453
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G I +++ S G H + + G+++++G G G
Sbjct: 454 AYNSDTLA---------PQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 503
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 504 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 551
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 552 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 611
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 612 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 670
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 671 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 711
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 477 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 529
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 530 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 584
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 585 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 641
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 642 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 701
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 702 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 749
Query: 310 LTVA 313
+ A
Sbjct: 750 QSFA 753
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4088 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4137
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4138 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4197
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4198 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4254
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4255 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4307
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3044 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3093
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3094 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3153
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3154 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3213
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3214 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3272
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3273 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3311
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3931 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3985
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3986 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4031
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4032 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4091
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4092 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4151
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4152 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4192
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3931 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3981
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3982 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4098
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4099 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4140
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2938 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2987
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2988 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3045
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3046 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3104
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3105 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3146
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 194/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3953 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4009
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4069
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4070 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G V ACG + + C +++WGD
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHHVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4174
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4235 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 160/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4061 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4110
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL ++ VACG + T +T ++
Sbjct: 4111 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVW 4170
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4171 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4275
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4323 --KPASAGKLPAQV 4334
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2945 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4111 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHHVVDVACGSGDAQT 4160
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4220
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4221 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4330
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4008
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4054
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4114
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGD 4174
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4004
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ V +ACG+ +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCL 4163
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3952 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4008
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4068
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4069 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4173
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4234 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4060 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4110 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4169
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4170 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4322 --KPASAGKLPAQV 4333
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3021 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3125
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3186 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4110 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4159
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4220 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4329
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4007
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4053
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4113
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K+F WG DK +LG G K +K+ VP+ L N +VA G A+T G VY+ G
Sbjct: 2961 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGE 3019
Query: 326 PVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG + G +P R LS V+++A G H LT +V++WG+G +G+
Sbjct: 3020 ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3079
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
LGH + + P L+EALK K+++ IACG++ +AA+ L+ W
Sbjct: 3080 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK+++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3952 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4008
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4068
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4069 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4173
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4234 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4060 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4110 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4169
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4170 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4322 --KPASAGKLPAQV 4333
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3021 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3078 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3125
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3186 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4110 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4159
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4220 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4329
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4007
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4053
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4113
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G + ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLF 3006
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
V V GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 3007 AVTV---------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
ALT G V++ G G+LG+ + + P +E L + +IACGS H A LT
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALT 3116
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2956 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3065
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3066 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3122
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3123 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3172
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3173 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3232
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3233 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3291
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3292 NRKPTLVQGLEGQKITRVACGSSHSVA 3318
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3945 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4001
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4002 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4061
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4062 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4118
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4119 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4166
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4167 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4226
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4227 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4285
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4286 RPRLVAALQGKKVNRVACGSAHTLA 4310
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3006 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3058
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3059 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3118
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3119 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3175
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3176 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3223
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3224 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3283
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3284 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3321
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4053 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4102
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4103 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4162
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4163 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4219
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4220 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4267
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4268 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4314
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4315 --KPASAGKLPAQV 4326
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2939 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 2996
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 2997 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3053
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3110
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3111 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3161
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3162 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3220
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3221 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3267
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4103 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4152
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4153 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4212
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4213 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4269
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4270 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4322
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3061 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3110
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3111 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3170
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3171 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3230
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3231 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3289
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3290 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3328
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3946 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4000
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4001 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4046
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4047 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4106
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4107 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4166
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4167 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4207
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3946 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3996
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3997 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4113
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4114 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4155
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2955 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3004
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3005 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3062
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3063 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3121
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3122 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3163
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2905 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3014
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3015 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3071
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3072 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3121
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3122 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3181
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3182 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3240
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3241 NRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3895 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3951
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3952 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4011
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4012 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4068
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4069 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4116
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4117 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4176
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4177 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4235
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4236 RPRLVAALQGKKVNRVACGSAHTLA 4260
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2955 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3007
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3008 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3067
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3068 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3124
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3125 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3172
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3173 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3232
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3233 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3270
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4003 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4052
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4053 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4112
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4113 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4169
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4170 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4217
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4218 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4264
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4265 --KPASAGKLPAQV 4276
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2904 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 2963
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 2964 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3020
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3021 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3068
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3069 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3128
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3129 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3187
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3188 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3216
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 421
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 422 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 471
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 472 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 519
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 520 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 579
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 580 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 638
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 639 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 445 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 497
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 498 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 552
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 553 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 609
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 669
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 670 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPA 717
Query: 310 LTVA 313
+ A
Sbjct: 718 QSFA 721
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4053 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4102
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4103 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4162
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4163 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4219
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4220 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4272
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3010 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3059
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3060 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3119
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3120 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3179
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3180 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3238
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3239 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3277
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3896 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3950
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3951 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3996
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3997 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4056
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4057 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4116
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4117 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3946
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3947 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G + ++
Sbjct: 2893 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLF 2949
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
V V GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 2950 AVTV---------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 3000
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
ALT G V++ G G+LG+ + + P +E L + +IACGS H A LT
Sbjct: 3001 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALT 3059
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
S E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3060 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3112
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 194/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + A
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG +VALT G VY+ G +LG+ + + P +EG K ++ +A
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EV++WG +N + H DT + PS + L K + IACG +
Sbjct: 718 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 194/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3953 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKL 4009
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4010 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4069
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4070 --EDGKLGHGNRSPCDRP-RVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4174
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H + EVYTWG G+LG G T+
Sbjct: 4235 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 164/326 (50%), Gaps = 44/326 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES +V ++A GG H+A V
Sbjct: 4061 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGTEVVDVAAGGAHSACVT 4110
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4111 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4170
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4171 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSE------------DGEVYT 4275
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEI 356
P + GKLP V+ + + ++EI
Sbjct: 4323 --KPASAGKLP--VQVPMEYNHLQEI 4344
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2945 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P+ + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4111 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4160
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4220
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H + G+++T+G
Sbjct: 4221 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWG 4277
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4330
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 4010
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4011 ATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLA 4056
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G +Y
Sbjct: 4057 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLY 4116
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 4117 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4176
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 4004
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L + V ++A G H A +T+ ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2969 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3078
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3079 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3135
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3136 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3185
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3186 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3245
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3246 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3304
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3305 NRKPTLVQGLEGQKITRVACGSSHSVA 3331
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 194/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3960 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4016
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4017 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4076
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4077 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4133
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G V ACG + + C +++WGD
Sbjct: 4134 GHSDSEDQLKPKLVEALQGHHVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4181
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4182 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4241
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4242 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4300
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4301 RPRLVAALQGKKVNRVACGSAHTLA 4325
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3019 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3071
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3072 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3131
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3132 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3188
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3189 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3236
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3237 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3296
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3297 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3334
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 160/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4068 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4117
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL ++ VACG + T +T ++
Sbjct: 4118 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVW 4177
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4178 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4234
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4235 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4282
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4283 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4329
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4330 --KPASAGKLPAQV 4341
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2952 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3009
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3010 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3066
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3123
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3124 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3174
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3175 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3233
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3234 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3280
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4118 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHHVVDVACGSGDAQT 4167
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4168 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4227
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4228 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4284
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4285 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4337
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3074 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3123
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3124 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3183
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3184 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3243
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3244 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3302
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3303 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3341
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3961 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4015
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4016 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4061
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4062 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4121
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4122 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGD 4181
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4182 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4222
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3961 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4011
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4012 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4128
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ V +ACG+ +CL
Sbjct: 4129 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCL 4170
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2968 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3017
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3018 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3075
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3076 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3134
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3135 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3176
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2961 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3177
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3178 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3237
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3297 NRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3950 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4066
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4067 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4123
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4124 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4171
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4231
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4232 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4290
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4291 RPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3011 GKVYACGEAT-NGRLGLGI----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3063
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3064 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3123
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3124 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3180
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3181 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3229 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3289 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3326
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4058 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4107
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4108 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4167
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4168 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4224
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4225 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4272
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4273 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4319
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4320 --KPASAGKLPAQV 4331
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2944 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3001
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3002 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3058
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3115
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3116 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3166
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3225
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3226 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4108 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4157
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4158 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4217
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4218 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4274
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4275 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4327
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3066 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3115
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3116 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3175
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3176 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3235
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3236 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3294
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3333
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3951 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4005
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4006 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4051
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4111
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4112 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4171
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4172 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4001
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4002 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2960 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3009
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3010 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3067
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3068 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3126
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3127 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2599 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2649 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 2708
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 2709 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2765
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 2766 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 2815
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E VP + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2816 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2875
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2876 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 2934
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 2935 NRKPTLVQGLEGQKITRVACGSSHSVA 2961
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3588 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3644
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3645 YATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3704
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHG+ P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3705 --EDGKLGHGSRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3761
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 3762 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 3809
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VPT + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3810 GDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3869
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3870 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3928
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 3929 RPRLVAALQGKKVNRVACGSAHTLA 3953
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 169/341 (49%), Gaps = 30/341 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G V+ GE T +G LG GL+ G+ +P+ + + V+ +A GGRHA
Sbjct: 2649 GKVYACGEAT-NGRLGLGLSS-GTV-------PIPRQITALSSYMVKKVAVHSGGRHATA 2699
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY
Sbjct: 2700 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELY 2759
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ + PK V L G V ++CG T +T G +F++G
Sbjct: 2760 TWGLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 2816
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + ++P+ +E L G + CG + A+ + SG +
Sbjct: 2817 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 2864
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L VA G +A+T SG VY G +
Sbjct: 2865 WTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDH 2924
Query: 329 GQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GQ GN + P V+G L + +ACGS H T+
Sbjct: 2925 GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2964
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 157/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G + P+ +ES ++V ++A GG H+A V
Sbjct: 3696 GEVYSWGEAE-DGKLG---------HGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 3745
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 3746 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 3805
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3806 SWGDGDY--GKLGRGGSDGCKVPTKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3862
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3863 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3910
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3911 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3957
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 3958 --KPTSAGKLPAQV 3969
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 2657
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 2658 TN--GRLGLGLSSGTVPIPRQITA-LSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2714
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 2715 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 2762
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 2763 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 2822
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 2823 LGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2881
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 2882 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 2910
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 170/350 (48%), Gaps = 44/350 (12%)
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
AA + EV WG +G ++V+ P + L+N+ + +AC E ++ S
Sbjct: 104 QAAWIGSLQEVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRS 158
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQL 204
G +YT YN L P+ V G L ++ I+ H + + G++
Sbjct: 159 GRVYT---QAYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEV 205
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSS 260
+++G G G LGHGD + P+ + + G + V ACG ++AA+
Sbjct: 206 YSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAIT--------- 256
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSG 318
+ G+L+TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G
Sbjct: 257 ---AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENG 313
Query: 319 HVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
V++ G YG+LG +DG K P +E KL V ++ CGS LT +VY+WGK
Sbjct: 314 QVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGK 372
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
G N RLGHG + P L+E L+ K+V +A G+ A+ +H W
Sbjct: 373 GDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 422
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 142/302 (47%), Gaps = 37/302 (12%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES----A 73
+ H DG A G+V+ WG G G R+G V ++ PKA+ +
Sbjct: 188 AAHSDGHHYLALAATGEVYSWGCGDG--------GRLGHGDTVPLEE--PKAISAFSGKQ 237
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V
Sbjct: 238 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 297
Query: 134 AC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
AC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V + CG
Sbjct: 298 ACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCG 354
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ +T GQ++++G G LGHG + V P+ +E L+G + + A G H A+
Sbjct: 355 SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 414
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E ++ +WG D+ + + K P + L + +ACG + +
Sbjct: 415 E------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQS 462
Query: 312 VA 313
A
Sbjct: 463 FA 464
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 3746 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 3795
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3796 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGA 3855
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 3856 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 3912
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 3913 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPTSAGKL 3965
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2704 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 2753
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2754 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2813
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2814 SWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2873
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 2874 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 2932
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 2933 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2971
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3589 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3643
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3644 LYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAV--------------NSGGKHC 3689
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG + P + +L VA G + + +T +G
Sbjct: 3690 LALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 3749
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 3750 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 3809
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P+ +++L V + CG+ F+ A+
Sbjct: 3810 GDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVAL 3850
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3589 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3639
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3640 ---ADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3756
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 3757 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3798
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2598 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 2647
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 2648 --EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGK 2705
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 2706 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 2764
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2765 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2806
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 205/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2964 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3013
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L + I+CG H+A +TS+G+L+T+G G
Sbjct: 3074 WGEG--DDGKLGHFSRMNCDKPRLIEA-LRAKRIRDIACGSSHSAALTSSGELYTWGLGE 3130
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3131 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3180
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3181 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3240
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3241 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3299
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3300 NRKPTLVQGLEGQKITRVACGSSHSVA 3326
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 193/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3954 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4010
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I VA G H A++ G++Y+WG+
Sbjct: 4011 YATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEA 4070
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHG+ P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4071 --EDGKLGHGSRSPCDRP-RVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4127
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE L+G R V ACG + + C +++WGD
Sbjct: 4128 GHSDSEDQLKPKLVEVLQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4175
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4176 GDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4235
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4236 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4294
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4295 RPRLVAALQGKKVNRVACGSAHTLA 4319
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG GL S V + + AL S VV V + GGRHA +
Sbjct: 3014 GKVYACGEAT-NGRLGLGL----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3066
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3067 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTW 3126
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3127 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3183
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3184 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3231
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3232 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3291
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3292 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3329
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 155/314 (49%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G + P+ +ES ++V ++A GG H+A V
Sbjct: 4062 GEVYSWGEAE-DGKLG---------HGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVT 4111
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++ L + VACG + T +T ++
Sbjct: 4112 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVW 4171
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4172 SWGDGDY--GKLGRGGSDGCKVPMKIES-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4228
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4229 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4276
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4277 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4323
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4324 --KPSSAGKLPAQV 4335
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3022
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3023 TN--GRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3079
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+L+ R ACG H+AA+ SSG+L+TWG
Sbjct: 3080 GKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT------------SSGELYTWG 3127
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3128 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3187
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3188 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3246
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3247 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3275
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 166/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G++F++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+VF WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVFSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQGGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLEVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V PR +E L G + + A G H A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3069 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT 3118
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3119 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3178
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3179 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3238
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3239 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3297
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3298 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3336
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E V ++ACG A
Sbjct: 4112 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEVLQGHRVVDVACGSGDAQT 4161
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P I++L+ + + V CG + A+T SG
Sbjct: 4162 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGA 4221
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4222 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4278
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4279 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPSSAGKL 4331
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3955 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4009
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ G G G LG G +SVS P +ES++ +R V G H A+
Sbjct: 4010 LYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLAL----------- 4058
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG + P V +L VA G + + +T +G +Y
Sbjct: 4059 -SSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLY 4117
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 4118 TWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 4177
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +E+L V + CG+ F+ A+
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVAL 4216
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 9/172 (5%)
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SS K+F WG DK +LG G K +K+ VP+ L N +VA G A+T G
Sbjct: 2956 SSAAVRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG 3014
Query: 319 HVYTMGSPVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTW 375
VY G G+LG + G +P R LS V+++A G H LT +V++W
Sbjct: 3015 KVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSW 3074
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
G+G +G+LGH + + P L+EAL+ K+++ IACG++ +AA+ L+ W
Sbjct: 3075 GEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTW 3126
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3012
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3013 --EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3070
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E +K + +IACGS H A LTS E+YTWG G
Sbjct: 3071 VFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKR-IRDIACGSSHSAALTSSGELYTWGLG 3129
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3130 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3171
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4005
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4006 ---ADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVE L+ +V +ACG+ +CL
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCL 4164
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2965 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+++G G
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3131
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3181
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3241
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIIH-VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTV 3300
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + +
Sbjct: 3301 NRKPTLVQGLEGQKITRVACGSSHSVS 3327
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3955 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4011
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4071
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V I+ G H+A +T+AG L+T+G G +G L
Sbjct: 4072 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRL 4128
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4129 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4176
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4236
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4237 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4295
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4296 RPRLVAALQGKKINRVACGSAHTLA 4320
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 196/383 (51%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD+L P+L+ +L+
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDILGPQLVQSLA 492
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++++WG G + G LGHG+ V PK ++ G
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 550
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V+CG +VALT G VY+ G +LG+ + + P +EG L V ++
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGEKVIDVVA 717
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EVY+W G+N + H DT + P+ + L K + IACG +
Sbjct: 718 GSTHCLALTEDSEVYSW--GSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSF 775
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 166/333 (49%), Gaps = 26/333 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG GL S V + + AL + VV V + GGRHA +
Sbjct: 3015 GKVYACGEAT-NGRLGLGL----SSGTVPIPRQI-TALSNYVVKKVA-VHSGGRHAMALT 3067
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY+W
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3127
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3232
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3233 WGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3292
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
GN + P V+G L + +ACGS H
Sbjct: 3293 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSH 3324
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 4063 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDIAAGGAHSACIT 4112
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 4113 AAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4173 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGVGVVKVECGSQFSVALTKSGAVYTWGKG 4229
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4324
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 4325 --KPANAGKLPTQV 4336
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 168/338 (49%), Gaps = 40/338 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3023
Query: 156 TYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G LG G +S++V K+V ++ G H +T G+
Sbjct: 3024 TN--GRLGLGLSSGTVPIPRQITALSNYVVKKV----------AVHSGGRHAMALTVDGK 3071
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------ 3119
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVY 321
SSG+L++WG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V+
Sbjct: 3120 SSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 322 TMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G +G+LG ++G +P +E +L+ V +I CG+ LT V+TWGKG
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLGHG P +VE L+ K++ +A G A+
Sbjct: 3239 FRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAV 3276
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 146/286 (51%), Gaps = 27/286 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3070 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT 3119
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE++SWG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3120 SSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G +P+ + L G V I CG + +T +G ++T+G G
Sbjct: 3180 SWGDG--DFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V P+ VE L+G + + A G H AV + +G+++
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTD------------TGQVYA 3284
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
WGD D G+ G+G PT V L RVACG S +V+ TT
Sbjct: 3285 WGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWTT 3330
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 146/285 (51%), Gaps = 25/285 (8%)
Query: 51 LNRVGSCFGVKMDSSL--PKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGG 106
L+R G + +S + P+ ++S ++ IA G H + GEVFSWG GG
Sbjct: 467 LSRNGRVYTQAYNSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526
Query: 107 RLGHGVDSDVLHPKLIDALSNM----NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 162
RLGHG + PK+I ALS ++ +ACG ++ A+T G+LYTWG G N+G L
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRL 584
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
GHG+ +P V G L+G+ V +SCG T VT GQ++++GDG +G LG G
Sbjct: 585 GHGSSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGS 643
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
P+ +E L+ L V+ +CG + A+ + G++++WG GD RLG
Sbjct: 644 DGCKTPKLIEKLQDLDIVKVSCGSQFSVALTK------------DGQVYSWGKGDNQRLG 691
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
HG +E P + L V G + +ALT VY+ GS
Sbjct: 692 HGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGS 736
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 165/332 (49%), Gaps = 40/332 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV +WG +G ++V P + L+++ + +AC E ++ +G +YT
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQA-- 477
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +LG P+ V L ++ I+ H + + G++F++G G G
Sbjct: 478 -YNSDILG---------PQLVQS-LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + +++CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P L+E L+ ++V + G+ A+
Sbjct: 694 TEEHVRYPKLLEGLQGEKVIDVVAGSTHCLAL 725
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 143/298 (47%), Gaps = 29/298 (9%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD 77
+ H DG A G+VF WG G G G LG G KM S+L V+
Sbjct: 500 AAHSDGHHYLALAATGEVFSWGCGDG-GRLGHG--DTVPLEEPKMISALSGKQAGKHVV- 555
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
+IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V+C
Sbjct: 556 --HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGS 613
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ T AVT +G +++WGDG Y G LG G PK + L+ + + +SCG +
Sbjct: 614 GDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDIVKVSCGSQFS 670
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T GQ++++G G LGHG + V P+ +E L+G + + G H A+ E
Sbjct: 671 VALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTE--- 727
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
++++WG D+ + + K PT + L + +ACG + + A
Sbjct: 728 ---------DSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSFA 776
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 123/242 (50%), Gaps = 22/242 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG G + D PK +E+ V +IACG A
Sbjct: 4113 AAGDLYTWGKGRY-GRLGHGDSE---------DQLKPKLVEALQGYRVIDIACGSGDAQT 4162
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4163 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGA 4222
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4223 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4279
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S ++GKL
Sbjct: 4280 DNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAW-------STSKPANAGKL 4332
Query: 269 FT 270
T
Sbjct: 4333 PT 4334
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3956 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4010
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4011 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4056
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L +A G + + +T +G
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGD 4116
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4117 LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4176
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4177 GDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVAL 4217
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4006
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4007 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T+ ++YTWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 4123
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K+F WG DK +LG G K +K+ VP+ L N +VA G A+T G VY G
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGE 3022
Query: 326 PVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG + G +P R LS V+++A G H LT +V++WG+G +G+
Sbjct: 3023 ATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 3082
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
LGH + + P L+EALK K+++ IACG++ +AAI L+ W
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3127
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 105/229 (45%), Gaps = 17/229 (7%)
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+V T ++F +G LG + +P E+L L V+ A G AV
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT---- 3012
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTV 312
GK++ G+ GRLG G + +P + AL +VA G +
Sbjct: 3013 --------VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 313 ALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G G+LG+ + + P +E L + +IACGS H A +TS E
Sbjct: 3065 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGE 3123
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+Y+WG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3124 LYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 190/383 (49%), Gaps = 29/383 (7%)
Query: 21 SQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G+ H GD+ WG G DG LG G D P L + +
Sbjct: 12 SAGASHSVALLSGDIVCSWGRGE-DGQLG---------HGDAEDRPSPTQLSALDGHQIV 61
Query: 80 NIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++ CG H ++ G EV+SWG GRLGHG SD+ P I AL + I+ +ACG+
Sbjct: 62 SVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDS 121
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H AVT G++ +WG G LG G+ VP+++ EGI + ++ G HTA V
Sbjct: 122 HCLAVTXEGEVQSWG--RNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKXVAAGAEHTAAV 178
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G L+ +G G +G LG GDR +P V S G + ACG HT +V
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISV-------- 230
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG L+T+G G+LGHGD E L+P + AL +++ G T ALT+ G
Sbjct: 231 ----SYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSDG 286
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y G +GQ+G D P +V + V+ ++CG H +T + V+ WG+
Sbjct: 287 KLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGR 345
Query: 378 GANGRLGHGDTDDRNSPSLVEAL 400
G NG+LG G++ DRN P ++EAL
Sbjct: 346 GTNGQLGIGESVDRNFPKIIEAL 368
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 178/340 (52%), Gaps = 18/340 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 11 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 70
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG ++Y+WG G +FG LGHGN + P + L GI + I+CG H VT
Sbjct: 71 VAYSQSGXEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 127
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD + +P+++++ +G+R A G HTAAV E
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTE------- 180
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +LVP V + VACG T++++ SG
Sbjct: 181 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235
Query: 320 VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+YT G YGQLG+ D +P+++E LS SF+ +I+ G+ H LTS ++Y WG
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIPHKLE-ALSNSFISQISGGARHTXALTSDGKLYGWGWN 294
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 295 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 334
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 283 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 342
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D PK+I+ALS
Sbjct: 343 WGRGTNGQLGIGESVDRNFPKIIEALS 369
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 206/387 (53%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3953 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4009
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4069
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4070 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4126
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4127 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4174
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4234
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4235 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4293
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4294 RPRLVAALQGKKVNRVACGSAHTLA 4318
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG GL S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGL----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3289
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4061 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4110
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4111 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4170
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4171 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4227
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4228 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4275
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4276 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4322
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4323 --KPASAGKLPAQV 4334
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2945 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATN--GRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 3227 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4111 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4160
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4161 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4220
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4221 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4277
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4278 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4330
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A + V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTIDVATPS 3334
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3954 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4008
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4009 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4054
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4114
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4115 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4174
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4175 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4004
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4005 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 206/388 (53%), Gaps = 33/388 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ PK E L NIA G + +V+
Sbjct: 2654 VFVWGLNDKDQL--GGLK------GSKIKE--PKFSEVISNLKPMNIAGGSKSLFIVSHD 2703
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G+VF+ GE + GRLG G +V PK + LS I+ VA G H A+T+ G +++W
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSW 2763
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN++S+ PK V L+ + ++CG H+A VTS+G+L+T+G G +
Sbjct: 2764 GEG--EDGKLGHGNKISYDRPKLVES-LKCKRIRDVACGSSHSAAVTSSGELYTWGSGEY 2820
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHGD P++V +L R V+ ACG T A+ E +++
Sbjct: 2821 GRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTE------------RHWVYS 2868
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + +P V L +V CG ++AL+ +G V+T G Y +
Sbjct: 2869 WGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFR 2928
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + + P VE +L+ V +++ G+ H +T + EVY WG +G+ G+G+T
Sbjct: 2929 LGHGSDSHVRWPQVVE-ELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTT 2987
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P++V L + + ++ACG++ + A
Sbjct: 2988 VNRKPAIVRGL--EAITNVACGSSHSVA 3013
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 199/387 (51%), Gaps = 25/387 (6%)
Query: 38 WGEGTGDGVLGG-GLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
WG G GV+ G G N G GV+ ++ L I G + + G
Sbjct: 3615 WG---GSGVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDG 3671
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWG 153
+V++ G +GGRLG G V P LI+ L ++ + VA G H A+T SGD+++WG
Sbjct: 3672 KVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWG 3731
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+G + G LGHG++ PK + L HV S++CG H+A +T++G+L+T+G G +G
Sbjct: 3732 EG--DDGKLGHGSKALCERPKLIES-LRDKHVVSVACGGAHSACITASGELYTWGKGRYG 3788
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS--GKLFTW 271
LGHGD + P++VE L G + ACG + + C S G +++W
Sbjct: 3789 RLGHGDSEDQLKPKKVEELAGHNVLDVACG------------SGDAQTLCVSRDGLVWSW 3836
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G + P + +L +V CG +VALT +G VYT G Y +L
Sbjct: 3837 GDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRL 3896
Query: 332 GNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ D + P V+G L V ++A GS H T EV+TWG G+LG G T+
Sbjct: 3897 GHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNA 3956
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P LV +LK K++ +ACG+ T +
Sbjct: 3957 IQRPKLVASLKGKKMNRVACGSAHTVS 3983
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 164/335 (48%), Gaps = 33/335 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G VF GEGT +G LG G + + PK L ++ +A GGRHA
Sbjct: 2704 GKVFACGEGT-NGRLG---------LGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALA 2753
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G VFSWGE G+LGHG PKL+++L I VACG H+ AVT SG+LY
Sbjct: 2754 LTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELY 2813
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ V PK+V L V ++CG T +T ++++G
Sbjct: 2814 TWGSGEY--GRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHWVYSWG 2870
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G S+P+ VE+L + ++ CG + A+ +GK+
Sbjct: 2871 DGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL------------SKNGKV 2918
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L + N +V+ G +A+T G VY G +
Sbjct: 2919 WTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDH 2978
Query: 329 GQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYH 362
GQ GN + P V G + + +ACGS H
Sbjct: 2979 GQQGNGNTTVNRKPAIVRGLEA---ITNVACGSSH 3010
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 166/330 (50%), Gaps = 17/330 (5%)
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
N + +VF WG +LG S + PK + +SN+ +A G V+ G ++
Sbjct: 2649 NIECKVFVWGLNDKDQLGGLKGSKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFA 2708
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G+GT LGH + V+ P P I ++ G H +T G++F++G+G
Sbjct: 2709 CGEGTNGRLGLGHSHNVAQPKPLTDLSPY-FIKKVAVHSGGRHALALTIDGRVFSWGEGE 2767
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHG++ S P+ VESLK R ACG H+AAV SSG+L+TW
Sbjct: 2768 DGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVT------------SSGELYTW 2815
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYG 329
G G+ GRLGHGD +L P V AL +VACG + T+ALT VY+ G +G
Sbjct: 2816 GSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFG 2875
Query: 330 QLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+LG +DG LP VE L+ V ++ CG+ L+ +V+TWGKG RLGHG
Sbjct: 2876 KLGKGGSDGSSLPQNVE-TLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSD 2934
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L DK V ++ G A+
Sbjct: 2935 SHVRWPQVVEELADKNVIQVSVGALHCIAV 2964
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 162/310 (52%), Gaps = 20/310 (6%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
+L + L+ +V V + GG+H + G+VFSWGE G+LGHG + PKLI++
Sbjct: 3696 TLIETLQHVIVTQVA-VNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES 3754
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L + ++ VACG H+ +T SG+LYTWG G Y G LGHG+ PK+V L G +
Sbjct: 3755 LRDKHVVSVACGGAHSACITASGELYTWGKGRY--GRLGHGDSEDQLKPKKVE-ELAGHN 3811
Query: 185 VSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
V ++CG T V+ G ++++GDG +G LG G P++++SL+ ++ C
Sbjct: 3812 VLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVEC 3871
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA-ALVEPNF 301
G + A+ ++G ++TWG GD RLGHG ++ P V AL
Sbjct: 3872 GSQFSVALT------------AAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRV 3919
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+VA G VA T SG V+T G GQLG+ + ++ L + +ACGS
Sbjct: 3920 IQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSA 3979
Query: 362 H-VAVLTSKT 370
H V+ TSK+
Sbjct: 3980 HTVSWSTSKS 3989
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 143/288 (49%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG G K+ PK +ES ++++ACG H+A V
Sbjct: 2758 GRVFSWGEGE-DGKLG---------HGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVT 2807
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + L PK + ALS+ + VACG + T A+T +Y
Sbjct: 2808 SSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVY 2867
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G +P+ V L V + CG + ++ G+++T+G G
Sbjct: 2868 SWGDG--DFGKLGKGGSDGSSLPQNVET-LNSQQVIQVECGAQFSLALSKNGKVWTWGKG 2924
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V P+ VE L ++ + G H AV + G+++
Sbjct: 2925 DYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTD------------RGEVYA 2972
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
WGD D G+ G+G+ P V L VACG S +VA +++G
Sbjct: 2973 WGDNDHGQQGNGNTTVNRKPAIVRGL--EAITNVACGSSHSVAWSSTG 3018
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 123/228 (53%), Gaps = 22/228 (9%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+TS G+++ G G G LG G +SVS P +E+L+ + + A N
Sbjct: 3667 LTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAV--------------N 3712
Query: 258 SSSSNC----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
S +C SSG +F+WG+GD G+LGHG K P + +L + + VACG + +
Sbjct: 3713 SGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSAC 3772
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTE- 371
+T SG +YT G YG+LG+ ++ +L P +VE +L+ V ++ACGS L +
Sbjct: 3773 ITASGELYTWGKGRYGRLGHGDSEDQLKPKKVE-ELAGHNVLDVACGSGDAQTLCVSRDG 3831
Query: 372 -VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V++WG G G+LG G +D P +++L++ V + CG+ F+ A+
Sbjct: 3832 LVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVAL 3879
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS---LTVALTTSGHVYT 322
GK+F G+G GRLG G P + L P F + HS +ALT G V++
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDL-SPYFIKKVAVHSGGRHALALTIDGRVFS 2762
Query: 323 MGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G G+LG+ + P VE K + ++ACGS H A +TS E+YTWG G G
Sbjct: 2763 WGEGEDGKLGHGNKISYDRPKLVESLKCKR-IRDVACGSSHSAAVTSSGELYTWGSGEYG 2821
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTN--FTAAICLHKWV 424
RLGHGD + P V AL ++V +ACG+ T A+ WV
Sbjct: 2822 RLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWV 2866
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 8/167 (4%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K+F WG DK +LG G K +K+ P + +A G ++ G V+ G
Sbjct: 2653 KVFVWGLNDKDQLG-GLKGSKIKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGE 2711
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG + + LS F++++A G H LT V++WG+G +G+L
Sbjct: 2712 GTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKL 2771
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
GHG+ + P LVE+LK K+++ +ACG++ +AA+ L+ W SG
Sbjct: 2772 GHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSG 2818
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 210/415 (50%), Gaps = 31/415 (7%)
Query: 12 SLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE 71
S S+ V S +G VF+WG D + GG+ GS + + S L
Sbjct: 2873 STSANVGRSQDSTGEPSSTVGCRVFVWGLNDKDQL--GGMK--GSKVKLPVQSDFLSQLW 2928
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
+IA G + +V+ +G++++ GE + GRLG G ++V +P+ I LS I+
Sbjct: 2929 PI------HIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIK 2982
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VA G H A+TL G +++WG+G G LGHGN ++ PK + L + I+
Sbjct: 2983 KVAVHSGGKHAMALTLDGKVFSWGEG--EDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIA 3039
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHT 247
CG H+A +TS+G+L+T+G G +G LGHGD + P+ ++SL G R V+ ACG T
Sbjct: 3040 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQT 3099
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A+ + G +F+WGDGD G+LG G E +P + L ++ CG
Sbjct: 3100 LALTD------------EGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECG 3147
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
++ALT +G V+T G Y +LG+ + P +E K + +A G+ H +
Sbjct: 3148 AQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVI-HVAVGALHCLAV 3206
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
T +VY WG +G+ G+G T P+LV L+D + +ACG++ + A L
Sbjct: 3207 TDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQ 3261
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 209/407 (51%), Gaps = 31/407 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
WG G+G + G G N G G++ +P E+ L + G + V G+
Sbjct: 3866 WG-GSGT-IYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGK 3923
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGD 154
V++ G +GGRLG G VL P L++++ ++ I+ +A G H A++ D+Y+WG+
Sbjct: 3924 VYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGE 3983
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LGHGN ++ PK + L+G + I+CG H+A +TS GQL+T+G G +G
Sbjct: 3984 G--DDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 4040
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWG 272
LGHGD + P+ +E L G + + ACG + + C + +++WG
Sbjct: 4041 LGHGDSEDQLKPKLIEELVGYKVIDVACG------------SGDAQTLCITDDDNVWSWG 4088
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG
Sbjct: 4089 DGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG 4148
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + P +V K + IA GS H + + EV+TWG G+LG T+
Sbjct: 4149 HGTGEHVRRPKKVAALQGKKII-SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAI 4207
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLP 438
P LV AL+ K++ ++ACG+ T A W + S C+ RLP
Sbjct: 4208 QRPRLVSALQGKKITNVACGSAHTLA-----WSTNNASSACA--RLP 4247
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 171/350 (48%), Gaps = 31/350 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ ++ L ++ I C R ++ + G+VF SD P+ + LS
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----------MYYSSDTQCPQEMTGLS 511
Query: 127 NMN-IELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+N I++ A E H A+T ++Y+WG+G + G LGHG+ + P + L+G
Sbjct: 512 GINMIKIAAHPEGKHYLALTKDYEVYSWGNG--DGGRLGHGDTSTKEEPTLIQA-LKGKD 568
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ + CG ++A +++ G L+T+G G +G LGHG + P + +L ++ ACG
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGS 628
Query: 245 W--HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
+ HT + S GK+++WGDGD G+LG G + +P + L
Sbjct: 629 FYAHTLCIT------------SQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIV 676
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSY 361
+V CG +VAL+ GHVYT G +LG+P + + P VE L V ++ G
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGVS 735
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
HV LT + EVY WGK N ++ P L+EALK ++V + CG
Sbjct: 736 HVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 169/328 (51%), Gaps = 35/328 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+ D LS + I+ + C + +T +G ++ + + ++ P+ + G
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF----------FMYYSSDTQ--CPQEMTG 509
Query: 179 PLEGIHVSSISCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L GI++ I+ P H +T +++++G+G G LGHGD + P +++LKG
Sbjct: 510 -LSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKD 568
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ CG ++AA+ ++G L+TWG G+ GRLGHG E L PT ++AL
Sbjct: 569 IIDVECGGTYSAAI------------SANGALYTWGRGNYGRLGHGTAEDCLTPTMISAL 616
Query: 297 VEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFV 353
+ + +VACG ++ T+ +T+ G VY+ G YG+LG +DG KLP +E KL +
Sbjct: 617 SDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-KLQNVKI 675
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
++ CG+ L+ VYTWGKG +LGH ++ P +VE L+D++V ++ G +
Sbjct: 676 VQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVS 735
Query: 414 FTAAIC----LHKWVSGVDQSMCSGCRL 437
A+ ++ W ++ +C L
Sbjct: 736 HVLALTDQGEVYGWGKNENKQICDSSEL 763
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 141/280 (50%), Gaps = 21/280 (7%)
Query: 51 LNRVGSCFGVKM--DSSLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGG 106
L + G F + D+ P+ + +++ IA G+H + K EV+SWG GG
Sbjct: 486 LTQTGKVFFMYYSSDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGG 545
Query: 107 RLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
RLGHG S P LI AL +I V CG ++ A++ +G LYTWG G N+G LGHG
Sbjct: 546 RLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRG--NYGRLGHGT 603
Query: 167 EVSHWVPKRVNGPLEGIHVSSISCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
P ++ L H+ ++CG + HT +TS G+++++GDG +G LG G
Sbjct: 604 AEDCLTPTMISA-LSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSK 662
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
+PR +E L+ ++ V+ CG + A+ E G ++TWG G+ +LGH +
Sbjct: 663 LPRLIEKLQNVKIVQVYCGAQFSVALSE------------DGHVYTWGKGEGWKLGHPTE 710
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
E P V L + V+ G S +ALT G VY G
Sbjct: 711 ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWG 750
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 169/362 (46%), Gaps = 38/362 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V+ WG G G G LG G K + +L +AL+ ++DV+ CGG ++A ++
Sbjct: 535 EVYSWGNGDG-GRLGHGDT------STKEEPTLIQALKGKDIIDVE---CGGTYSAAISA 584
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY--HTCAVTLSGDLYT 151
G +++WG + GRLGHG D L P +I ALS+ +I VACG + HT +T G +Y+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYS 644
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WGDG Y G LG G +P+ + L+ + + + CG + ++ G ++T+G G
Sbjct: 645 WGDGDY--GKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGE 701
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LGH ++V P VE L+ + V + GV H A+ + G+++ W
Sbjct: 702 GWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD------------QGEVYGW 749
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQ 330
G + ++ + P + AL V CG + + A T P
Sbjct: 750 GKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWTDDNERTPKTAVPFVID 809
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGS------YHVA---VLTSKTEVYTWGKGANG 381
LG Q + N +E L+ + ++ C + H+ ++++ + T G GAN
Sbjct: 810 LGE-QTFKLIENLLEVVLTNTIAQDKECIAVSALNLLHLQLHCIISNNLDTKTLGIGANS 868
Query: 382 RL 383
+L
Sbjct: 869 KL 870
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GKL+ G+G GRLG G P + L + +VA G +ALT G V++
Sbjct: 2946 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 3005
Query: 324 GSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G G+LG+ + + P +E SK + +IACGS H A +TS E+YTWG G GR
Sbjct: 3006 GEGEDGKLGHGNRLNLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLGEYGR 3064
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTN--FTAAICLHKWV 424
LGHGD + P L+++L ++ +ACG+ T A+ WV
Sbjct: 3065 LGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWV 3108
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 188/387 (48%), Gaps = 29/387 (7%)
Query: 17 VSSSSQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
V + S G+ H GD+ WG G DG LG G + P + +
Sbjct: 16 VLALSAGASHSVALLSGDLVCSWGRGE-DGQLG---------HGDAEERHFPTIVSALDD 65
Query: 76 LDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
++ ++ CG H AL N V+SWG GRLGHG SD+ P+ I AL + ++ +A
Sbjct: 66 CEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIA 125
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
CG+ H A+T G++ WG LGH +V P ++ EG+ V ++ G H
Sbjct: 126 CGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVL--TPHKLT-AFEGVAVKMLAAGAEH 182
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
T VT G+L+ +G G +G LG GDR+ +P +V ++ G ACG HT V E
Sbjct: 183 TTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAE-- 240
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG ++T+G G+LGHGD L+P V AL + G T AL
Sbjct: 241 ----------SGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFAL 290
Query: 315 TTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+ G +Y G +GQ+G D P V+G L V + CG H +T + VY
Sbjct: 291 DSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-LQDQVVTVVQCGWRHTLAMTDRGNVY 349
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEAL 400
+WG+G +G+LGHGDT DR++P +E L
Sbjct: 350 SWGRGTSGQLGHGDTVDRSTPKRIEIL 376
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 182/343 (53%), Gaps = 18/343 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++ G H+ + V SWG G+LGHG + P ++ AL + I V CG
Sbjct: 16 VLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGA 75
Query: 138 YHTCAVTLSGD-LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A++ S +Y+WG G +FG LGHGN ++P+ + L+G+ V I+CG H
Sbjct: 76 DHTTALSNSTKTVYSWGWG--DFGRLGHGNSSDLFIPQPIK-ALKGLEVKQIACGDSHCL 132
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+T+ G++ +G G LG G + V P ++ + +G+ A G HT AV E
Sbjct: 133 AITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE---- 188
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+GKL+ WG G G LG GD+E +LVP VAA+ VACG T+ +
Sbjct: 189 --------NGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAE 240
Query: 317 SGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
SG++YT G YGQLG+ AD +P++V+ SK ++ I G H L S +Y W
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKK-IQAITGGWRHTFALDSDGRLYGW 299
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G++G G+T+D++SP LV+ L+D+ V + CG T A+
Sbjct: 300 GWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAM 342
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 138/308 (44%), Gaps = 55/308 (17%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G R+G G D +P+ +++ L+V+ IACG H +
Sbjct: 88 VYSWGWGD--------FGRLG--HGNSSDLFIPQPIKALKGLEVKQIACGDSHCLAITTD 137
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV WG G+LG G DVL P + A + ++++A G HT AVT +G LY WG
Sbjct: 138 GEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGW 197
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LG G+ VP +V + G + ++CG HT V +G ++TFG +G
Sbjct: 198 GRY--GNLGLGDREDRLVPDQV-AAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQ 254
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVW-HTAAVV--------------EVMVGNSS 259
LGHGD IP +V++LK + ++A G W HT A+ +V GN+
Sbjct: 255 LGHGDFADHLIPHQVQALKS-KKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTE 313
Query: 260 SSN--------------------------CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
+ G +++WG G G+LGHGD + P +
Sbjct: 314 DQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRI 373
Query: 294 AALVEPNF 301
L F
Sbjct: 374 EILSSDGF 381
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 193/379 (50%), Gaps = 40/379 (10%)
Query: 47 LGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGG 106
+G G N+ S F P+ +V + +ACG H A V K G +++ G + G
Sbjct: 1 MGLGENKRNSVF------YYPRVCSFQIV--IHQLACGLDHTAFVAKNGYLYTMGSNALG 52
Query: 107 RLGHGVDS--DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 164
+LG G S + P+L+ ALS + V+CG HTCA+ SG+L++WGD + G LG
Sbjct: 53 KLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSE--GQLGI 110
Query: 165 GNEVSHWVPKRVN-GPLEGIH--VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
+ SH+ P+ VN L+GI+ V+ +SCG +HT V GQ+ +FG G G LG G++
Sbjct: 111 NSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQN 170
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
P + SL + ++ CG +HT + E SG++++ G D+G+LG
Sbjct: 171 KQYKPFLLNSLS--QIIKVKCGFYHTLFLDE------------SGRVYSCGLNDEGQLGQ 216
Query: 282 GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 341
G E + + +E +F + S + A+T + +Y G GQ PQ
Sbjct: 217 GHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQFLYPQLV---- 272
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
++ + V EI+ G++ +T +VY+WG G+LG GD+D R PSLVE L
Sbjct: 273 -----RICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLN 327
Query: 402 DKQVKSIACGTNFTAAICL 420
+K+V S CG N+ ICL
Sbjct: 328 EKKVISATCGENYV--ICL 344
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 49/306 (16%)
Query: 45 GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
G LG G + + F ++ S+L K V ++CG H + GE+FSWG+ S
Sbjct: 52 GKLGIGQQSLQNSFQPQLVSALSK-------YKVMQVSCGHSHTCAIIDSGELFSWGDSS 104
Query: 105 GGRLGHGVDSDVLHPKLIDA--LSNMN--IELVACGEYHTCAVTLSGDLYTWGDGTYNFG 160
G+LG + +P+L++ L +N + V+CG YHT AV +G + ++G G G
Sbjct: 105 EGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKK--G 162
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LG GN+ + P +N + I V CG +HT + +G++++ G G LG G
Sbjct: 163 QLGTGNQNKQYKPFLLNSLSQIIKV---KCGFYHTLFLDESGRVYSCGLNDEGQLGQGHN 219
Query: 221 K-SVSIPREVESLKGLRTVRAACGVWHTAAVV---------------------------- 251
+ ++S PR V L+ + G H+AA+
Sbjct: 220 EGNISSPRLVLELEHSFIKKIFAGS-HSAAITDANEIYFFGKSQLGQFLYPQLVRICQGD 278
Query: 252 --EVMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
E+ +GN + GK+++WG +G+LG GD + +++P+ V L E CG
Sbjct: 279 VNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGE 338
Query: 309 SLTVAL 314
+ + L
Sbjct: 339 NYVICL 344
>gi|413923469|gb|AFW63401.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 502
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 171/324 (52%), Gaps = 41/324 (12%)
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
VEG L FV++I+CGS HVAVL +V+TWGKG G+LG GD DR+SP+LVEAL+DK
Sbjct: 2 VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61
Query: 404 QVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSK 463
QV SI C +N TAAIC+H +S DQS+CS CRL F F RK+HNCYNCG + C+SCSS
Sbjct: 62 QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRLAF-RFTRKKHNCYNCGSMVCNSCSSN 120
Query: 464 KSLKASMAPNPNKPYRVCDNCFNKLRKTFDTDGSSHSSVSRRGSINQGPNEFIDKDEKLD 523
K +A++AP+ +K RVCD CFN+L KT + H +S I + P+ +
Sbjct: 121 KVHRAALAPDKSKRCRVCDACFNELNKT-----AEHGKMSCGSKIQKEPSYLA------E 169
Query: 524 SRSRA-QLTRFSSMESFKQSEGRSKRNKKLEFNSSRVSPIPNGSSQWGALNISKSFN--- 579
+R+ +L+R +F + S + N +P +WG + F
Sbjct: 170 TRTYTPKLSRMLKEANFIMEKMGSSAQSPGQRNQEPATPNQMQKERWGQVECPDRFKCAR 229
Query: 580 ---PMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAK 636
P + KK P + R P+S++ + P + T + D +
Sbjct: 230 DNIPHRLTPKKQTIDDYP----MRRMADPVSQKTAAPLTQTTS--------------DRR 271
Query: 637 RTND----SLSQEVIKLRAQVFAF 656
+ D L +EV +L+AQV
Sbjct: 272 KEQDLIEKILLEEVKQLQAQVTTL 295
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V GPL+ V ISCG H AV+ G++FT+G GT G LG GD S P VE+L+
Sbjct: 2 VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61
Query: 236 RTVRAACGVWHTAAV-VEVMVGNSSSSNCSSGKL 268
+ C TAA+ V + + S CSS +L
Sbjct: 62 QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRL 95
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V++I+CG H A++ G+VF+WG+ + G+LG G D P L++AL + ++ + C
Sbjct: 11 VKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSS 70
Query: 138 YHTCAVTLSGDL 149
T A+ + G++
Sbjct: 71 NSTAAICVHGEI 82
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
++ ++CG H + ++G ++TWG GT G LG G+ V P V LE V SI
Sbjct: 11 VKDISCGSSHVAVLAMNGKVFTWGKGTE--GQLGLGDYVDRSSPTLVEA-LEDKQVDSIV 67
Query: 190 CGPWHTAVVTSAGQL 204
C TA + G++
Sbjct: 68 CSSNSTAAICVHGEI 82
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+GK+FTWG G +G+LG GD + PT V AL + + C + T A+ G + +
Sbjct: 27 NGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSSNSTAAICVHGEISSKD 86
Query: 325 SPV 327
V
Sbjct: 87 QSV 89
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 201/390 (51%), Gaps = 27/390 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GG+ GS + + S L +IA G + +V+ +
Sbjct: 2057 VFVWGLNDKDQL--GGMK--GSKVKLPVQSDFLSQLWPI------HIAGGSKSLFIVSHE 2106
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G ++V +P+ I LS I+ VA G H A+TL G +++W
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN ++ PK + L + I+CG H+A +TS+G+L+T+G G +
Sbjct: 2167 GEG--EDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 2223
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ ++SL G R V+ ACG + + G +F+WG
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTL----------ALTDEGWVFSWG 2273
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G E +P + L ++ CG ++ALT +G V+T G Y +LG
Sbjct: 2274 DGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLG 2333
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P +E K + +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2334 HGSDQHVRKPTVIESLKDKKVI-HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVN 2392
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLH 421
P+LV L+D + +ACG++ + A L
Sbjct: 2393 RKPALVHGLEDVHINRVACGSSHSIAWTLQ 2422
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 209/407 (51%), Gaps = 31/407 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
WG G+G + G G N G G++ +P E+ L + G + V G+
Sbjct: 3027 WG-GSGT-IYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGK 3084
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGD 154
V++ G +GGRLG G VL P L++++ ++ I+ +A G H A++ D+Y+WG+
Sbjct: 3085 VYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGE 3144
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LGHGN ++ PK + L+G + I+CG H+A +TS GQL+T+G G +G
Sbjct: 3145 G--DDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGR 3201
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWG 272
LGHGD + P+ +E L G + + ACG + + C + +++WG
Sbjct: 3202 LGHGDSEDQLKPKLIEELVGYKVIDVACG------------SGDAQTLCITDDDNVWSWG 3249
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG
Sbjct: 3250 DGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLG 3309
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + P +V K + IA GS H + + EV+TWG G+LG T+
Sbjct: 3310 HGTGEHVRRPKKVAALQGKKII-SIATGSLHCVACSDEGEVFTWGDNDEGQLGDDTTNAI 3368
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLP 438
P LV AL+ K++ ++ACG+ T A W + S C+ RLP
Sbjct: 3369 QRPRLVSALQGKKITNVACGSAHTLA-----WSTNNASSACA--RLP 3408
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 148/285 (51%), Gaps = 27/285 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG G NR+ +D PK +E+ +++IACG H+A +
Sbjct: 2161 GKVFSWGEGE-DGKLGHG-NRLN------LDK--PKMIEALRSKKIRDIACGSSHSAAIT 2210
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + L PKLI +L I VACG + T A+T G ++
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVF 2270
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G +P + L + V I CG + +T G+++T+G G
Sbjct: 2271 SWGDG--DFGKLGRGGSEGCNIPHNIER-LNALEVVQIECGAQFSLALTKTGEVWTWGKG 2327
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P +ESLK + + A G H AV + +G+++
Sbjct: 2328 DYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD------------TGQVYA 2375
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
WGD D G+ G+G P V L + + RVACG S ++A T
Sbjct: 2376 WGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 6/164 (3%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GKL+ G+G GRLG G P + L + +VA G +ALT G V++
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166
Query: 324 GSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G G+LG+ + + P +E SK + +IACGS H A +TS E+YTWG G GR
Sbjct: 2167 GEGEDGKLGHGNRLNLDKPKMIEALRSKK-IRDIACGSSHSAAITSSGELYTWGLGEYGR 2225
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTN--FTAAICLHKWV 424
LGHGD + P L+++L ++ +ACG+ T A+ WV
Sbjct: 2226 LGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWV 2269
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G R+G G P +ES V ++A G H V
Sbjct: 2319 GEVWTWGKG--------DYFRLG--HGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVT 2368
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
G+V++WG+ G+ G+G P L+ L +++I VACG H+ A TL
Sbjct: 2369 DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTL 2421
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 205/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 3222 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ + ALS+ ++ VA G H A+T+ G +++
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3331
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3332 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3388
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3389 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3438
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3439 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3498
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3499 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3557
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV L+ +++ +ACG++ + A
Sbjct: 3558 NRKPTLVHGLEGQKITRVACGSSHSVA 3584
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 4209 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4265
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4266 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4325
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V+ ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4326 --EDGKLGHGNRSPCDRP-RVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRL 4382
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4383 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4430
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4431 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4490
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4491 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4549
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4550 RPRLVAALQGKKVNRVACGSAHTLA 4574
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 165/339 (48%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG GL+ G AL S VV V + GGRHA +
Sbjct: 3272 GKVYACGEAT-NGRLGLGLSS-----GTVPIPRQVTALSSYVVKKVA-VHSGGRHATALT 3324
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3325 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3384
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3385 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3441
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3442 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3489
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3490 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3549
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V G L + +ACGS H T+
Sbjct: 3550 QGNGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVAWTT 3587
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4317 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVADVAAGGAHSACVT 4366
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4367 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 4426
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4427 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4483
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4484 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4531
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4532 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4578
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4579 --KPASAGKLPAQV 4590
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 169/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y G+
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3280
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P++V L V ++ G H +T G++F++G+G
Sbjct: 3281 TN--GRLGLGLSSGTVPIPRQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3337
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +E+LK R ACG H+AA+ SSG+L+TWG
Sbjct: 3338 GKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWG 3385
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3386 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3445
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3446 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3504
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3505 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3533
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + +AC E ++ +G +YT
Sbjct: 685 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT---Q 736
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 737 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 786
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 787 RLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 834
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 835 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 894
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 895 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 953
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 954 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 994
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 760 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISTFSGKQAGK------ 812
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 813 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 867
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 868 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 924
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 925 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 984
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K PT + L + +ACG +
Sbjct: 985 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPA 1032
Query: 310 LTVA 313
+ A
Sbjct: 1033 QSFA 1036
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 3215 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3269
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G+++ G+ T G LG G +V IPR+V +L + A H+ G
Sbjct: 3270 VEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAV---HSG-------GRH 3319
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+++ GK+F+WG+GD G+LGH + P + AL +ACG S + ALT+SG
Sbjct: 3320 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3379
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+YT G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 3380 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3439
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 3440 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3481
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4367 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 4416
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4417 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4476
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4477 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4533
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4534 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4586
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3327 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3376
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3377 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3436
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3437 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3496
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3497 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3555
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V L+G + R ACG H+ A V V S
Sbjct: 3556 TVNRKPTLVHGLEGQKITRVACGSSHSVAWTTVDVATPS 3594
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 4210 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4264
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4265 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4310
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4311 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGD 4370
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4371 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4430
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4431 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4471
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 4210 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4260
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4261 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKG 4377
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4378 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4419
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 3221 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3270
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P V AL +VA G ALT G
Sbjct: 3271 --EGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGK 3328
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3329 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3387
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3388 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3429
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 203/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+ +A G + V +
Sbjct: 1796 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG GV S V P+ + ALS+ ++ VA G H A+T G +++
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFS 1905
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + + P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 1906 WGEG--DDGKLGHFSRXNCDKPRLIEA-LKSRRIRDIACGSSHSAALTSSGELYTWGLGE 1962
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R V+ ACG + + G +F+W
Sbjct: 1963 YGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTL----------ALTDEGLVFSW 2012
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E VP + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 2013 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 2072
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 2073 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTV 2131
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 2132 NRKPTLVQGLEGQKITRVACGSSHSVA 2158
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT V G G N G GV+ +P E+ L + G + V G++
Sbjct: 2786 GSGT---VYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKL 2842
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 2843 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 2902
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 2903 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRL 2959
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 2960 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTEDDTVWSWGD 3007
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP V AL +V CG +VALT SG VYT G Y +LG+
Sbjct: 3008 GDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3067
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3068 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3126
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 3127 RPRLVAALQGKKVNRVACGSAHTLA 3151
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 167/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G++ G AL S VV V + GGRHA +
Sbjct: 1846 GKVYACGEAT-NGRLGLGVSS-----GTVPVPRQVTALSSYVVKKVA-VHSGGRHATALT 1898
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL + I +ACG H+ A+T SG+LYTW
Sbjct: 1899 ADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTW 1958
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 1959 GLGEY--GRLGHGDNTTQLKPKMVK-VLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDG 2015
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + ++P+ +E L G + CG + A+ + SG ++T
Sbjct: 2016 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2063
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 2064 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2123
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 2124 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2161
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 176/347 (50%), Gaps = 24/347 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N VA G
Sbjct: 1779 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGS 1836
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + VP++V L V ++ G H
Sbjct: 1837 KSLFAVTVEGKVYACGEATN--GRLGLGVSSGTVPVPRQVTA-LSSYVVKKVAVHSGGRH 1893
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T+ G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALT--- 1950
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V LV +VACG + T+
Sbjct: 1951 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTL 2001
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 2002 ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 2060
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+TWGKG RLGHG P +VE L+ K++ +A G A+
Sbjct: 2061 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2107
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 159/319 (49%), Gaps = 42/319 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 2894 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 2943
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 2944 AAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVW 3003
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +V+ L G+ + CG + +T +G ++T+G G
Sbjct: 3004 SWGDGDY--GKLGRGGSDGCKVPMKVDA-LTGLGAVKVECGSQFSVALTKSGAVYTWGKG 3060
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3061 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3108
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3109 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 3155
Query: 331 LGNPQADGKLPNRVEGKLS 349
P + GKLP +V + S
Sbjct: 3156 --KPASAGKLPAQVPMEYS 3172
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG + + P+ +E+ +++IACG H+A +
Sbjct: 1901 GKVFSWGEGD-DGKLG---------HFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALT 1950
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 1951 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVF 2010
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2011 SWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2070
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 2071 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 2129
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 2130 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 2168
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + + G VT+ G+L+
Sbjct: 2787 SGTVYGWGHN--HRGQLGGVEGAKVKVPTPCEA-LAALRPAQLIGGEQTLFAVTADGKLY 2843
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 2844 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLA 2889
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G +Y
Sbjct: 2890 LSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLY 2949
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG G
Sbjct: 2950 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGD 3009
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P V+AL + CG+ F+ A+
Sbjct: 3010 YGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVAL 3048
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 1795 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGG---SKSLFAVTV------- 1844
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + VP V AL +VA G ALT G
Sbjct: 1845 --EGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGK 1902
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E S+ + +IACGS H A LTS E+YTWG G
Sbjct: 1903 VFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRR-IRDIACGSSHSAALTSSGELYTWGLG 1961
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 1962 EYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLAL 2003
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR + G AV
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT--------- 2837
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 2838 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ +YTWGKG
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 2996
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 204/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL GS V + S AL+ VQ IA G + V+
Sbjct: 2423 VFVWGLNDKDQL--GGLK--GSKIKVPVLSEFIGALK------VQQIAGGSKTLFAVSHD 2472
Query: 95 GEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+VF+ GE + GRLG G + ++V P+ I+ LS+ + V+ G H A+T+ G L++
Sbjct: 2473 GKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFS 2532
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G G LGHGN ++ PK ++ + V +SCG H+A + S+G+L+T+G G
Sbjct: 2533 WGEG--EDGKLGHGNRMNCDHPKLIDT-FKSSCVRDMSCGSSHSAAILSSGELYTWGLGE 2589
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P++V+S R + ACG + + G +++W
Sbjct: 2590 YGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTL----------ALTDDGTVWSW 2639
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E VP V L C+VACG ++AL+TSG V+T G Y +L
Sbjct: 2640 GDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRL 2699
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P V+G K V+ +A G+ H +T +V+ WG +G+ G+ T
Sbjct: 2700 GHGNDTHVRKPQIVDGLRGKKIVD-VAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTV 2758
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P LV L+ +++ +ACG++ + A
Sbjct: 2759 NRRPQLVNGLEGQKITRVACGSSHSIA 2785
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 204/388 (52%), Gaps = 24/388 (6%)
Query: 36 FIWGEGTGDGVLGGGLN---RVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
WG G+G + G G N ++GS G K+ LP+ +E+ + I G + V
Sbjct: 3348 MTWG-GSGT-IYGWGHNHRGQLGSLEGAKV--KLPQTIEALASIRPVQIVGGEQTLFAVT 3403
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
+G+V++ G GGRLG G V K++++L ++ + VA G H A++ GD+Y
Sbjct: 3404 AEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVY 3463
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G + G LGHGN S P RV L G V ISCG H+A +T +L+T+G G
Sbjct: 3464 SWGEG--DDGKLGHGNRNSCDRP-RVIEALRGKGVIDISCGGSHSACITQNHELYTWGKG 3520
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGHGD + +P+ VE+L+G R + ACG + + +C +++
Sbjct: 3521 RYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLC------LTDDDC----VWS 3570
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + +P V +L+ +V CG +VALT SG VYT G Y +
Sbjct: 3571 WGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYR 3630
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ D + P RV K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3631 LGHGVDDHVRRPKRVAALQGKKVI-TIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTN 3689
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 3690 AIARPRLVTALQGKKISRVACGSAHTIA 3717
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 169/335 (50%), Gaps = 30/335 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G VF GE T +G LG G + + ++P+ +E+ V+ ++ GGRHA
Sbjct: 2473 GKVFACGEST-NGRLGLG--------PLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMA 2523
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ +G++FSWGE G+LGHG + HPKLID + + ++CG H+ A+ SG+LY
Sbjct: 2524 LTIEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELY 2583
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ +H PK+V V I+CG T +T G ++++G
Sbjct: 2584 TWGLGEY--GRLGHGDNYTHLKPKKVQS-FTSHRVIDIACGSRDAQTLALTDDGTVWSWG 2640
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + S+P VE L+G + ACG + A+ +SG +
Sbjct: 2641 DGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLAL------------STSGLV 2688
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG+ P V L VA G +A+T SG V+ G +
Sbjct: 2689 WTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDH 2748
Query: 329 GQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYH 362
GQ GN + P V G L + +ACGS H
Sbjct: 2749 GQQGNNTTTVNRRPQLVNG-LEGQKITRVACGSSH 2782
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 150/309 (48%), Gaps = 21/309 (6%)
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H A+T G++Y+WG G + G LGHG+ P V G L G V ISCG H+A V
Sbjct: 28 HFLALTREGEVYSWGSG--DGGKLGHGDTSPREEPTLVTG-LAGKQVIRISCGSTHSAAV 84
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVG 256
TS G+L+T+G G +G LGHG + +P V L+G + ACG HT A +
Sbjct: 85 TSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAAD---- 140
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G +++WGDGD G+LG G + P + L C+V CG ++ALT
Sbjct: 141 --------DGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR 192
Query: 317 SGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G V+T G +LG+ D + P VE L V +++ GS H LT EVY W
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEA-LDGKHVVDVSVGSIHCLALTDAGEVYCW 251
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI-CLHKWVSGVDQSMCSG 434
G+ G+LG D R P+LV L K + IACG + A C +W G C
Sbjct: 252 GRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQWSVGTRLQFCVD 311
Query: 435 -CRLPFNNF 442
C+ F +
Sbjct: 312 VCKRTFEHL 320
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 153/288 (53%), Gaps = 27/288 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GDV+ WGEG DG LG G NR SC P+ +E+ V +I+CGG H+A
Sbjct: 3458 ADGDVYSWGEGD-DGKLGHG-NR-NSC-------DRPRVIEALRGKGVIDISCGGSHSAC 3507
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD-- 148
+ + E+++WG+ GRLGHG D L PK+++AL + VACG + L+ D
Sbjct: 3508 ITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDC 3567
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++WGDG Y G LG G +P +V L G+ VS + CG + +T +G ++T+G
Sbjct: 3568 VWSWGDGDY--GKLGRGGSDGCKIPMKVES-LIGLGVSKVECGSQFSVALTRSGAVYTWG 3624
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G + LGHG V P+ V +L+G + + A G H A + +G++
Sbjct: 3625 KGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGSLHCVA------------STDTGEV 3672
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+TWGD D+G+LG G A P V AL RVACG + T+A +T
Sbjct: 3673 YTWGDNDEGQLGDGTTNAIARPRLVTALQGKKISRVACGSAHTIAWST 3720
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 142/278 (51%), Gaps = 19/278 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G+H + ++GEV+SWG GG+LGHG S P L+ L+ + ++CG H+ AVT
Sbjct: 26 GKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT 85
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAG 202
G+LYTWG G N+G LGHG+ VP V+G L G H+ ++CG HT G
Sbjct: 86 SEGELYTWGRG--NYGRLGHGSSEDQLVPVLVSG-LRGHHIIDVACGSGDAHTLAAADDG 142
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++++GDG +G LG G P+ +E L+GL + CG + A+
Sbjct: 143 TVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR---------- 192
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
G ++TWG G+ RLGHG ++ P V AL + V+ G +ALT +G VY
Sbjct: 193 --DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYC 250
Query: 323 MGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
G GQLG+ + P V G SK V IACG
Sbjct: 251 WGRNDQGQLGDIDCQIRPEPTLVSGLASKGIV-GIACG 287
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 170/331 (51%), Gaps = 22/331 (6%)
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
Q +VF WG +LG S + P L + + + ++ +A G AV+ G ++ G
Sbjct: 2420 QIKVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479
Query: 154 DGTYNFGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDG 210
+ T G LG G ++ VP+++ L V +S G H +T G+LF++G+G
Sbjct: 2480 ESTN--GRLGLGPLSANVTVPRQIEN-LSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEG 2536
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHG+R + P+ +++ K +CG H+AA++ SSG+L+T
Sbjct: 2537 EDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAIL------------SSGELYT 2584
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVY 328
WG G+ GRLGHGD L P V + +ACG + T+ALT G V++ G +
Sbjct: 2585 WGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDF 2644
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G+LG ++G +PN VE KL V ++ACG+ L++ V+TWGKG RLGHG+
Sbjct: 2645 GKLGRGGSEGCSVPNPVE-KLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGN 2703
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +V+ L+ K++ +A G A+
Sbjct: 2704 DTHVRKPQIVDGLRGKKIVDVAVGALHCLAV 2734
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 142/289 (49%), Gaps = 27/289 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G G LG G + + +L L V+ I+CG H+A V
Sbjct: 36 GEVYSWGSGDG-GKLGHGDT------SPREEPTLVTGLAGKQVI---RISCGSTHSAAVT 85
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
+GE+++WG + GRLGHG D L P L+ L +I VAC G+ HT A G ++
Sbjct: 86 SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 145
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G PK + L+G+ V + CG + +T G ++T+G G
Sbjct: 146 SWGDGDY--GKLGRGGSDGCKNPKSIER-LQGLGVCKVYCGAQFSLALTRDGSVWTWGKG 202
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LGHG V P+ VE+L G V + G H A+ + +G+++
Sbjct: 203 EGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTD------------AGEVYC 250
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
WG D+G+LG D + + PT V+ L +ACG + + A + +G
Sbjct: 251 WGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQ 299
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 118/250 (47%), Gaps = 19/250 (7%)
Query: 6 MDAFRVSLSSAVSSSSQGSGHDDGD-ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
+D F+ SS V S GS H + G+++ WG G G LG G N
Sbjct: 2555 IDTFK---SSCVRDMSCGSSHSAAILSSGELYTWGLGEY-GRLGHGDNYT---------H 2601
Query: 65 SLPKALESAVVLDVQNIACGGRHAALV--NKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
PK ++S V +IACG R A + G V+SWG+ G+LG G P +
Sbjct: 2602 LKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPV 2661
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L + VACG + A++ SG ++TWG G Y LGHGN+ P+ V+G L G
Sbjct: 2662 EKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYY--RLGHGNDTHVRKPQIVDG-LRG 2718
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ ++ G H VT +GQ+F +GD G G+ P+ V L+G + R AC
Sbjct: 2719 KKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITRVAC 2778
Query: 243 GVWHTAAVVE 252
G H+ A E
Sbjct: 2779 GSSHSIAWAE 2788
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 134/275 (48%), Gaps = 15/275 (5%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG +P+ + L I I G VT+ G+++
Sbjct: 3353 SGTIYGWGHN--HRGQLGSLEGAKVKLPQTIEA-LASIRPVQIVGGEQTLFAVTAEGKVY 3409
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G G G LG G +V+ + +ESL+ + + A H+ G + + +
Sbjct: 3410 ATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAV---HSG-------GKHAMALSAD 3459
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G +++WG+GD G+LGHG++ + P + AL ++CG S + +T + +YT G
Sbjct: 3460 GDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGK 3519
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRL 383
YG+LG+ ++ +L +V L + V ++ACGS LT V++WG G G+L
Sbjct: 3520 GRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKL 3579
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G +D P VE+L V + CG+ F+ A+
Sbjct: 3580 GRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVAL 3614
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P+ +E+L +R V+ G AV
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVT--------- 3403
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GK++ G G GRLG G + + +L +VA G +AL+ G
Sbjct: 3404 ---AEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADG 3460
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ + RV L V +I+CG H A +T E+YTWGKG
Sbjct: 3461 DVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKG 3520
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P +VEAL+ +V +ACG+ +CL
Sbjct: 3521 RYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCL 3562
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A D +W G GD G L R GS G K PK++E L V + CG + +
Sbjct: 138 AADDGTVWSWGDGDY---GKLGRGGS-DGCKN----PKSIERLQGLGVCKVYCGAQFSLA 189
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ + G V++WG+ G RLGHG + V HPKL++AL ++ V+ G H A+T +G++Y
Sbjct: 190 LTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVY 249
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
WG + G LG + P V+G L + I+CGP + + AGQ
Sbjct: 250 CWGRN--DQGQLGDIDCQIRPEPTLVSG-LASKGIVGIACGPAQSFAWSCAGQ 299
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYT 322
GK+F G+ GRLG G A + VP + L +V+ G +ALT G +++
Sbjct: 2473 GKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFS 2532
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAVLTSKTEVYTWGKG 378
G G+LG+ G N KL +F V +++CGS H A + S E+YTWG G
Sbjct: 2533 WGEGEDGKLGH----GNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLG 2588
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD P V++ +V IACG+ + L
Sbjct: 2589 EYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLAL 2630
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/370 (33%), Positives = 200/370 (54%), Gaps = 20/370 (5%)
Query: 52 NRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG 111
+++G G K+ +P E+ L+V +A G + V +G+V+S GE + GRLG G
Sbjct: 6 DQLGGLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLG 63
Query: 112 VDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
+ S V P+ I ALS+ ++ VA G H A+T+ G +++WG+G + G LGH + +
Sbjct: 64 MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRM 121
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
+ P+ + L+ + I+CG H+A +TS+G+L+T+G G +G LGHGD + P+
Sbjct: 122 NCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 180
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
V+ L G R ++ ACG + + G +F+WGDGD G+LG G E
Sbjct: 181 VKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSWGDGDFGKLGRGGSEGCN 230
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGK 347
+P + L C++ CG ++ALT SG V+T G Y +LG+ + P VEG
Sbjct: 231 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 290
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
K V +A G+ H +T +VY WG +G+ G+G T P+LV+ L+ +++
Sbjct: 291 RGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 349
Query: 408 IACGTNFTAA 417
+ACG++ + A
Sbjct: 350 VACGSSHSVA 359
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 987 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 1043
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 1044 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 1103
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 1104 --KDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 1160
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 1161 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 1208
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 1209 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 1268
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 1269 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1327
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 1328 RPRLVAALQGKKVNRVACGSAHTLA 1352
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 168/339 (49%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 47 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 99
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 100 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 159
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 160 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 216
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 217 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 264
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 265 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 324
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 325 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 362
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 1095 GEVYSWGEAK-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 1144
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 1145 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 1204
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 1205 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1261
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 1262 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 1309
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 1310 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 1356
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 1357 --KPASAGKLPAQV 1368
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 165/318 (51%), Gaps = 22/318 (6%)
Query: 107 RLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG- 165
+LG S + P + LS +N+ VA G AVT+ G +Y+ G+ T G LG G
Sbjct: 7 QLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATN--GRLGLGM 64
Query: 166 NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
+ + +P+++ L V ++ G H +T G++F++G+G G LGH R +
Sbjct: 65 SSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 123
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
PR +E+LK R ACG H+AA+ SSG+L+TWG G+ GRLGHGD
Sbjct: 124 DKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGD 171
Query: 284 KEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KL 340
+L P V L+ +VACG + T+ALT G V++ G +G+LG ++G +
Sbjct: 172 NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 231
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P +E +L+ V +I CG+ LT V+TWGKG RLGHG P +VE L
Sbjct: 232 PQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 290
Query: 401 KDKQVKSIACGTNFTAAI 418
+ K++ +A G A+
Sbjct: 291 RGKKIVHVAVGALHCLAV 308
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G R+G D PK +E+ V +IACG A
Sbjct: 1145 AAGDLYTWGKGR--------YGRLG--HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQT 1194
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 1195 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 1254
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 1255 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 1311
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 1312 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 1364
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 102 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 151
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 152 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 211
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 212 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 271
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 272 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 330
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 331 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 369
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 988 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 1042
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 1043 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 1088
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ G+LGHG++ P + +L VA G + + +T +G
Sbjct: 1089 LALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 1148
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 1149 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 1208
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 1209 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1249
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 988 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 1038
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 1039 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1095
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1155
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 1156 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 1197
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
+ +P E+L L V+ A G + ++ V V GK+++ G+ GRLG G
Sbjct: 16 IKVPSFSETLSALNVVQVAGG---SKSLFAVTV---------EGKVYSCGEATNGRLGLG 63
Query: 283 DKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGN-PQADG 338
+ +P + AL +VA G ALT G V++ G G+LG+ + +
Sbjct: 64 MSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 123
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
P +E L + +IACGS H A LTS E+YTWG G GRLGHGD + P +V+
Sbjct: 124 DKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 182
Query: 399 ALKDKQVKSIACGTNFTAAICL 420
L +V +ACG+ + L
Sbjct: 183 VLLGHRVIQVACGSRDAQTLAL 204
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/481 (31%), Positives = 220/481 (45%), Gaps = 75/481 (15%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+++G G G L VGS GV + L K+ A + + CG ++N
Sbjct: 751 DVYLFGAGRH-----GQLAEVGS--GV-LVPQLTKSFHEA-----RKVVCGQNCTFIINN 797
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V S GE S GRLG G D I AL ++ +A + H A+T +G+++
Sbjct: 798 NGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVF 857
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L G V ++CG H+AVVT G+LFTFG G
Sbjct: 858 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LRGQEVVQVACGFKHSAVVTIDGKLFTFGYG 914
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGHG + IP V +L+ + ACG+ HT V S L
Sbjct: 915 DYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIV-------------SQDNLTV 961
Query: 271 W--GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
W GDGD G+LG G AK PT + L +++CG T ALT G ++ G
Sbjct: 962 WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRM 1021
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
+ +V LS + +I+ G+ H LTSK VYTWG +G+LG G T
Sbjct: 1022 CGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHT 1081
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAI-CLHK----WVSGVDQSMCSGCRL------ 437
+ P+LVE+L K ++ I+ G +AA C H + G +S+ S L
Sbjct: 1082 NHVQEPTLVESLSGKNIRQISAGRTHSAAWSCEHDDAGHTLLGTPESIPSQYDLLADVSV 1141
Query: 438 ---------------------PFNNFKRKRHNC-----YNCGLVFCHSCSSKKSLKASMA 471
P N+++K+H+ Y CG +SC S ++++ +
Sbjct: 1142 LDARGRLVVLSKFSDLISASWPLLNYQQKQHSTSDVTPYTCG----NSCFSSSAIRSILL 1197
Query: 472 P 472
P
Sbjct: 1198 P 1198
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 146/310 (47%), Gaps = 38/310 (12%)
Query: 28 DGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA 82
DG A+ G+VF WG+G + G +R P+ +E+ +V +A
Sbjct: 844 DGHAIALTENGEVFSWGDGDYGKLGHGNSDR----------QRRPRQIEALRGQEVVQVA 893
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA 142
CG +H+A+V G++F++G GRLGHG ++ P+ + AL N I VACG HT
Sbjct: 894 CGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVI 953
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
V+ +L W G ++G LG G + P ++ L + + ISCG TA +T G
Sbjct: 954 VS-QDNLTVWACGDGDYGKLGIGGTSAKTSPTKIE-VLSRVGIKKISCGAQFTAALTWDG 1011
Query: 203 QLFTFGDGTFGVLGHGD-RKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+LF FG + G+ + R S S P+ V +L + + G HT A+
Sbjct: 1012 KLFMFGQDR--MCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALT--------- 1060
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT----T 316
S G ++TWG G+LG G PT V +L N +++ G + + A +
Sbjct: 1061 ---SKGIVYTWGSNTDGQLGLGHTNHVQEPTLVESLSGKNIRQISAGRTHSAAWSCEHDD 1117
Query: 317 SGHVYTMGSP 326
+GH +G+P
Sbjct: 1118 AGHTL-LGTP 1126
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 205/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2872 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2981
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+ G H+A +TS+G+L+T+G G
Sbjct: 2982 WGEG--DDGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3038
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3039 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3088
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3089 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3148
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3149 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3207
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3208 NRKPTLVQGLEGQKITRVACGSSHSVA 3234
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3862 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3918
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3919 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3978
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3979 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4035
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4036 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4083
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4084 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4143
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4144 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4202
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4203 RPRLVAALQGKKVNRVACGSAHTLA 4227
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 165/339 (48%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 2922 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 2974
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI AL I +A G H+ +T SG+LYTW
Sbjct: 2975 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTW 3034
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3035 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3091
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3092 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3139
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3140 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3199
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3200 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3237
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3970 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4019
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4020 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4079
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4080 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4136
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4137 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4184
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4185 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4231
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4232 --KPASAGKLPAQV 4243
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 168/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2871 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 2930
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 2931 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2987
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +++LK R A G H+A + SSG+L+TWG
Sbjct: 2988 GKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT------------SSGELYTWG 3035
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3036 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3095
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3096 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3154
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3155 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3183
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 335 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 386
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 387 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 436
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 437 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 484
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 485 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 544
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 545 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 603
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ + +H W
Sbjct: 604 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSW 644
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 138/304 (45%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 410 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 462
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 463 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 517
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 518 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 574
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H
Sbjct: 575 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLV 634
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + K PT L + +ACG +
Sbjct: 635 LTE------------DSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPA 682
Query: 310 LTVA 313
+ A
Sbjct: 683 QSFA 686
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4020 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4069
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4070 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4129
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4130 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4186
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4187 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4239
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +++ +++IA G H+A +
Sbjct: 2977 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT 3026
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3027 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3086
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3087 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3146
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3147 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3205
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3206 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3244
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3863 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3917
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3918 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3963
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3964 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4023
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4024 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4083
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4084 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4124
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3863 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3913
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3914 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4030
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4031 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4072
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G + ++
Sbjct: 2860 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLF 2916
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
V V GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 2917 AVTV---------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 2967
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
ALT G V++ G G+LG+ R+ L + +IA GS H A LTS
Sbjct: 2968 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3027
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3028 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3079
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 201/403 (49%), Gaps = 36/403 (8%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFG 59
M +A RV L SA G+ H G+V WG G DG LG G
Sbjct: 6 MSEVAAPPRRVLLVSA------GASHSVALLSGNVVCSWGRGE-DGQLG---------HG 49
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG-EVFSWGEESGGRLGHGVDSDVLH 118
D P L + D+ + CG H ++ G +V+SWG GRLGHG SD+L
Sbjct: 50 DTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLI 109
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P I AL + I+ +ACG+ H AVT+ + +WG G LG G +P+++
Sbjct: 110 PHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWG--RNQNGELGLGTAEDSLLPQKIQ- 166
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
E I + ++ G H+ +T G L+ +G G +G LG GDR +P +V ++ G +
Sbjct: 167 IFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV-TVDGDKMA 225
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
ACG HT V SSG L+T G G G+LGHGD E LVP V AL +
Sbjct: 226 MVACGWRHTICV------------SSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSD 273
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIA 357
+V+ G ++ALT+SG + G +GQ+G D P +V + V+ I+
Sbjct: 274 KFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQK-VQMIS 332
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
CG H +T + VY+WG+GANG+LG+G+T DRN P+++EA
Sbjct: 333 CGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAF 375
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 178/365 (48%), Gaps = 21/365 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H+ + V SWG G+LGHG D L P + AL +I V CG HT
Sbjct: 19 VSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHT 78
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG D+Y+WG G +FG LGHG+ +P + L+G+ + I+CG H VT
Sbjct: 79 MARSESGRDVYSWGWG--DFGRLGHGDHSDLLIPHPIKA-LQGLMIQQIACGDSHCLAVT 135
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
Q+ ++G G LG G + +P++++ + + A G H+ A+ +
Sbjct: 136 MDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITK------- 188
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD+ +L+P V + VACG T+ +++SG
Sbjct: 189 -----DGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGD-KMAMVACGWRHTICVSSSGG 242
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+YT G YGQLG+ + L R LS F+ +++ G H LTS ++ WG
Sbjct: 243 LYTNGWGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNK 302
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSGC 435
G++G G+ D SP V D++V+ I+CG T A+ ++ W G + + +G
Sbjct: 303 FGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGANGQLGNGE 362
Query: 436 RLPFN 440
+ N
Sbjct: 363 TIDRN 367
Score = 46.6 bits (109), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 46 VLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
+LG G N+ G G D P + VQ I+CG RH V ++ V+SWG +
Sbjct: 295 LLGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGA 354
Query: 105 GGRLGHGVDSDVLHPKLIDALS 126
G+LG+G D P +I+A S
Sbjct: 355 NGQLGNGETIDRNVPTIIEAFS 376
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 202/378 (53%), Gaps = 21/378 (5%)
Query: 47 LGGGLNRVGS--CFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
+G G GS C GV + +P E+ L+V +A G + V +G+V++ GE
Sbjct: 2964 VGQGAVSTGSLCCDGVGLSQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3023
Query: 104 SGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFG 160
+ GRLG G+ S V P+ + ALS+ ++ VA G H A+T+ G +++WG+G + G
Sbjct: 3024 TNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDG 3081
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G +G LGHGD
Sbjct: 3082 KLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDN 3140
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ P+ V+ L G R ++ ACG + + G +F+WGDGD G+LG
Sbjct: 3141 TTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSWGDGDFGKLG 3190
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGK 339
G E +P + L C++ CG ++ALT SG V+T G Y +LG+ +
Sbjct: 3191 RGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVR 3250
Query: 340 LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA 399
P VEG K V +A G+ H +T +VY WG +G+ G+G T P+LV+
Sbjct: 3251 KPQVVEGLRGKKIVH-VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG 3309
Query: 400 LKDKQVKSIACGTNFTAA 417
L+ +++ +ACG++ + A
Sbjct: 3310 LEGQKITRVACGSSHSVA 3327
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3956 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4012
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4013 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4072
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI + ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4073 --EDGKLGHGNRSPCDRP-RVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4129
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 4130 GHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTVWSWGD 4177
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4178 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4237
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4238 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4296
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4297 RPRLVPALQGKKVNRVACGSAHTLA 4321
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 194/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + ++P V LKGL+ + A
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVA 610
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 611 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG ++ALT G VY+ G +LG+ + + P +EG K ++ +A
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EV++WG +N + H DT + PS + L K + IACG +
Sbjct: 718 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 776 A-----WSSCSEWSI--GLRVPF 791
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 166/339 (48%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G++ G AL S VV V + GGRHA +
Sbjct: 3015 GKVYACGEAT-NGRLGLGISS-----GTVPIPRQVTALSSYVVKKVA-VHSGGRHATALT 3067
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3127
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3128 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3232
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 3233 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3292
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3293 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3330
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 158/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES +++ ++A GG H+A V
Sbjct: 4064 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIELVDVAAGGAHSACVT 4113
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 4114 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 4173
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4174 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4230
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4231 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4278
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P V AL RVACG + T+A +TS
Sbjct: 4279 WGDNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLAWSTS------------- 4325
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4326 --KPASAGKLPTQV 4337
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/311 (35%), Positives = 161/311 (51%), Gaps = 22/311 (7%)
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWV 172
S + P + LS +N+ VA G AVT+ G +Y G+ T G LG G + + +
Sbjct: 2982 SQIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPI 3039
Query: 173 PKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
P++V L V ++ G H +T G++F++G+G G LGH R + PR +E
Sbjct: 3040 PRQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 3098
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+LK R ACG H+AA+ SSG+L+TWG G+ GRLGHGD +L P
Sbjct: 3099 ALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKP 3146
Query: 291 TCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGK 347
V L+ +VACG + T+ALT G V++ G +G+LG ++G +P +E +
Sbjct: 3147 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-R 3205
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
L+ V +I CG+ LT V+TWGKG RLGHG P +VE L+ K++
Sbjct: 3206 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3265
Query: 408 IACGTNFTAAI 418
+A G A+
Sbjct: 3266 VAVGALHCLAV 3276
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + VP VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P+ + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 122/242 (50%), Gaps = 22/242 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 4114 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 4163
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4164 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4223
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4224 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4280
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4281 DNDEGQLGDGTTNAIQRPRLVPALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4333
Query: 269 FT 270
T
Sbjct: 4334 PT 4335
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 3070 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 3119
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3239
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 3240 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 3298
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V + S
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMATPS 3337
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3957 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4011
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4012 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4057
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4058 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGD 4117
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 4118 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 4177
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4178 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4218
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3957 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4007
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4008 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L + ++A G H A +T+ ++YTWGKG
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKG 4124
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 4125 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4166
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
+ +P E+L L V+ A G + ++ V V GK++ G+ GRLG
Sbjct: 2983 QIKVPSFSETLSALNVVQVAGG---SKSLFAVTV---------EGKVYACGEATNGRLGL 3030
Query: 282 GDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGN-PQAD 337
G + +P V AL +VA G ALT G V++ G G+LG+ + +
Sbjct: 3031 GISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
P +E L + +IACGS H A LTS E+YTWG G GRLGHGD + P +V
Sbjct: 3091 CDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMV 3149
Query: 398 EALKDKQVKSIACGTNFTAAICL 420
+ L +V +ACG+ + L
Sbjct: 3150 KVLLGHRVIQVACGSRDAQTLAL 3172
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 203/397 (51%), Gaps = 40/397 (10%)
Query: 53 RVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGH 110
RV CF +S P+ +ES +V +A G+H + +GEV+SWG GGRLGH
Sbjct: 167 RVYMCF-YSSESQGPQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGH 225
Query: 111 GVDSDVLHP--KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
G D++V + K++ + + E H A+T G++Y+WG+G + G LGHG+
Sbjct: 226 G-DTNVCYKGQKVLVIVYPYHPE-----GKHYMALTSEGEVYSWGNG--DGGRLGHGDTN 277
Query: 169 SHWVPKRV---NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
S P V +G G HV I CG ++A +T+ G+LFT+G G +G LGHG +
Sbjct: 278 SREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLT 337
Query: 226 PREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
P V SLKG R + CG T AV + G +++WGDGD G+LG G
Sbjct: 338 PTLVVSLKGRRVIDICCGSGDAQTLAVTD------------DGTVWSWGDGDYGKLGRGG 385
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPN 342
+ P + L + RV CG ++ALT +GH++T G +LG+ + + P
Sbjct: 386 SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPK 445
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
++EG K V+ +A GS H V+T + EVY WG+ G+LG ++ P+L+ L
Sbjct: 446 QLEGLRGKKVVD-VAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLM-PLDG 503
Query: 403 KQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPF 439
K + IACG + C W S S+ G R+PF
Sbjct: 504 KSISGIACGP--AQSFC---WTSTGHWSV--GLRVPF 533
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 169/347 (48%), Gaps = 41/347 (11%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFS--WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
L V +AC R + K G V+ + ES G P+L+++L++ + V
Sbjct: 147 LGVLQLACAERCLIALTKTGRVYMCFYSSESQG------------PQLMESLADKEVLKV 194
Query: 134 ACGEY--HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
A H A+T G++Y+WG+G + G LGHG+ + ++V + H
Sbjct: 195 AAHPEGKHYMALTSEGEVYSWGNG--DGGRLGHGDTNVCYKGQKVLVIVYPYHPEGK--- 249
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHT 247
H +TS G+++++G+G G LGHGD S P V L G + V CG ++
Sbjct: 250 --HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYS 307
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
AA+ + G+LFTWG G+ GRLGHG E +L PT V +L + CG
Sbjct: 308 AAIT------------ADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCG 355
Query: 308 --HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
+ T+A+T G V++ G YG+LG +DG ++ +L + + CG+
Sbjct: 356 SGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLA 415
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
LT ++TWGKG + RLGHG + P +E L+ K+V +A G+
Sbjct: 416 LTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGS 462
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 145/307 (47%), Gaps = 35/307 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G G LG G V C+ + V++ V G+H +
Sbjct: 210 GEVYSWGNGDG-GRLGHGDTNV--CYKGQ-----------KVLVIVYPYHPEGKHYMALT 255
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN----MNIELVACGEYHTCAVTLSGD 148
+GEV+SWG GGRLGHG + P L+ LS ++ + CG ++ A+T G+
Sbjct: 256 SEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGE 315
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFT 206
L+TWG G N+G LGHG+ P V L+G V I CG T VT G +++
Sbjct: 316 LFTWGRG--NYGRLGHGSSEDQLTPTLVV-SLKGRRVIDICCGSGDAQTLAVTDDGTVWS 372
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+GDG +G LG G P+ ++ L+G VR CG + A+ + +G
Sbjct: 373 WGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTK------------TG 420
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++TWG GD RLGHG +E P + L VA G + +T G VY G
Sbjct: 421 HIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRN 480
Query: 327 VYGQLGN 333
GQLG+
Sbjct: 481 DQGQLGD 487
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 142/290 (48%), Gaps = 26/290 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
G+V+ WG G G G LG G + + +L + L + V +I CG ++A +
Sbjct: 258 GEVYSWGNGDG-GRLGHGDTNS------REEPTLVRGLSGKQLGRHVVHIVCGSTYSAAI 310
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDL 149
GE+F+WG + GRLGHG D L P L+ +L + + CG + T AVT G +
Sbjct: 311 TADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTV 370
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WGDG Y G LG G PK ++ L+G + + CG + +T G ++T+G
Sbjct: 371 WSWGDGDY--GKLGRGGSDGCKTPKIID-RLQGQDIVRVCCGAQFSLALTKTGHIWTWGK 427
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGHG + + P+++E L+G + V A G H + E G+++
Sbjct: 428 GDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTE------------EGEVY 475
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
WG D+G+LG K PT + L + +ACG + + T++GH
Sbjct: 476 GWGRNDQGQLGDSSFSTKSDPTLM-PLDGKSISGIACGPAQSFCWTSTGH 524
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 185/361 (51%), Gaps = 29/361 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHA-AL 90
G V WG G DG LG G + D L PKA+ + ++++ CG + A+
Sbjct: 32 GIVTSWGRGE-DGQLGHG----------QADECLAPKAISTLTDAGIESVVCGAEYTIAV 80
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+G+V+SWG GRLGHG +DV P+ I+ S + VACG+ HT V G+L+
Sbjct: 81 APSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELF 140
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
T+G LGH N+ + ++ L+G V S++CG H+ T +G +F++G G
Sbjct: 141 TFGRNQNGQLGLGHTNDC---LSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWG 197
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G+ + +P V L+G+R V A CG H+A V E G++FT
Sbjct: 198 RYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSE------------DGRVFT 245
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G G+LGHGD + VP VAAL VA G T+A +SG++Y G +GQ
Sbjct: 246 FGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQ 305
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG +D P V G L+ V + CG H +T VY+WG+G NG+LGHG
Sbjct: 306 LGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQ 365
Query: 390 D 390
D
Sbjct: 366 D 366
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 180/367 (49%), Gaps = 29/367 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++CG H+ + G V SWG G+LGHG + L PK I L++ IE V CG
Sbjct: 15 VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74
Query: 138 YHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE---GIHVSSISCGPW 193
+T AV S G +Y+WG G +FG LGHG+ +VP+ P+E G V ++CG
Sbjct: 75 EYTIAVAPSRGQVYSWGWG--DFGRLGHGDCNDVFVPR----PIEFFSGRPVHRVACGDT 128
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
HT VV G+LFTFG G LG G P+ V +L+G R ACG H+ A E
Sbjct: 129 HTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE- 187
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SG +F+WG G G LG G+ + + +PT V L CG +
Sbjct: 188 -----------SGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAV 236
Query: 314 LTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
++ G V+T G YGQLG+ D +P +V L + + +A G H S +
Sbjct: 237 VSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVA-ALRHTRISSVAGGWRHTMAADSSGNL 295
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLV-EALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
Y WG G+LG GD+ DR SP LV AL ++V + CG T A+ ++ W GV
Sbjct: 296 YGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGV 355
Query: 428 DQSMCSG 434
+ + G
Sbjct: 356 NGQLGHG 362
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
EP V+CG S +VA+ + G V + G GQLG+ QAD L + L+ + +E +
Sbjct: 12 EPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVV 71
Query: 358 CGS-YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG+ Y +AV S+ +VY+WG G GRLGHGD +D P +E + V +ACG T
Sbjct: 72 CGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTL 131
Query: 417 AI 418
+
Sbjct: 132 VV 133
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 46 VLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA---CGGRHAALVNKQGEVFSWGE 102
+ G G N+ G G+ S P + L Q ++ CG RH V + G V+SWG
Sbjct: 295 LYGWGWNKFGQ-LGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGR 353
Query: 103 ESGGRLGHGVDSDV 116
G+LGHG + D+
Sbjct: 354 GVNGQLGHGAEQDL 367
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 205/387 (52%), Gaps = 28/387 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V+S GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+ G H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T G Y +L
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 3238
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P VEG K V +A G+ H +T +VY WG +G+ G+G T
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVH-VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3297
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV+ L+ +++ +ACG++ + A
Sbjct: 3298 NRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3952 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4008
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4068
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 4069 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4125
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4126 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4173
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4233
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4234 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4292
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4293 RPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 165/339 (48%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G+ S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYSCGEAT-NGRLGLGM----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI AL I +A G H+ +T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T SG VY G +GQ
Sbjct: 3230 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3289
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 3290 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 4060 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 4109
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 4110 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 4169
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4170 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4226
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4227 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4274
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4275 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4321
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4322 --KPASAGKLPAQV 4333
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 168/329 (51%), Gaps = 22/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT+ G +Y+ G+
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEA 3020
Query: 156 TYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
T G LG G + + +P+++ L V ++ G H +T G++F++G+G
Sbjct: 3021 TN--GRLGLGMSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH R + PR +++LK R A G H+A + SSG+L+TWG
Sbjct: 3078 GKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT------------SSGELYTWG 3125
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G +G+
Sbjct: 3126 LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 3185
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLGHG
Sbjct: 3186 LGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE L+ K++ +A G A+
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+++ + VAC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN +L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ + +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSW 734
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 138/304 (45%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVIKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLV 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + K PT L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPA 772
Query: 310 LTVA 313
+ A
Sbjct: 773 QSFA 776
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 4110 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 4159
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4160 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4219
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4220 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4276
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4277 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4329
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +++ +++IA G H+A +
Sbjct: 3067 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT 3116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3176
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 3177 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 3236
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 3237 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 3295
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 3334
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3953 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4007
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4008 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4053
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4113
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4114 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 4173
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4174 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4003
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4004 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 104/232 (44%), Gaps = 15/232 (6%)
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
P + T ++F +G LG + +P E+L L V+ A G + ++
Sbjct: 2950 PGLESTATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLF 3006
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GH 308
V V GK+++ G+ GRLG G + +P + AL +VA G
Sbjct: 3007 AVTV---------EGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGG 3057
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
ALT G V++ G G+LG+ R+ L + +IA GS H A LTS
Sbjct: 3058 RHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3117
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3118 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 194/389 (49%), Gaps = 33/389 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V++WG + GG ++ + PK SAV D Q + G L+
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKI----------TTPKY--SAVFTDCQQVEAGQFCTFLIY 444
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPK--LIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ PK L D I + H+ A+T +G++Y
Sbjct: 445 SDGTVGACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTTGEVY 504
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHG + +PK V GPL G V +S G H+A VT G+L+T+GDG
Sbjct: 505 SWGDGDY--GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDG 562
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK-LF 269
FG LGH S + P +V+S++ + V ACG HT AV + GK ++
Sbjct: 563 EFGRLGHDYTSSKNFPTKVQSIESVGLV--ACGGSHTLAVSQ------------DGKTIW 608
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
++G G+ G+LGHGD +L P + AL +VACG ++A+T+SG +Y G
Sbjct: 609 SFGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAIL 668
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
G+ + P VE SK V +IACG HV LT ++EVY WG A G+ G G
Sbjct: 669 GCGSAEYTALRPRLVEDLQSKRMV-DIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQ 727
Query: 390 DR-NSPSLVEALKDKQVKSIACGTNFTAA 417
P V L V ++ GT+ + A
Sbjct: 728 SPITRPKRVIGLDGVSVHQVSAGTSHSVA 756
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 167/331 (50%), Gaps = 30/331 (9%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV+ WG +L G + PK ++ + V G++ T + G + G
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPKYSAVFTD--CQQVEAGQFCTFLIYSDGTVGACGK 454
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPL-EGIHVSSISCGPW---HTAVVTSAGQLFTFGDG 210
G+Y G LG G+ + VPK+ PL + +V IS H+ +T+ G+++++GDG
Sbjct: 455 GSY--GRLGLGDSNNCSVPKK---PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDG 509
Query: 211 TFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LGHG + IP+ V+ L G + G H+AAV E G+L+
Sbjct: 510 DYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTE------------DGELY 557
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVY 328
TWGDG+ GRLGH +K PT V ++ VACG S T+A++ G +++ G
Sbjct: 558 TWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL--VACGGSHTLAVSQDGKTIWSFGGGEN 615
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G+LG+ + +L +V L+ ++ ++ACGS +TS ++Y WG GA LG G
Sbjct: 616 GKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGA--ILGCGSA 673
Query: 389 DDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
+ P LVE L+ K++ IACG + A+
Sbjct: 674 EYTALRPRLVEDLQSKRMVDIACGDSHVIAL 704
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 33/288 (11%)
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G++Y WG + L G + PK + + G + T ++ S G +
Sbjct: 397 GEVYVWGSNCTH--QLAEGGQEKITTPKYSAVFTD---CQQVEAGQFCTFLIYSDGTVGA 451
Query: 207 FGDGTFGVLGHGDRKSVSIPR----EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
G G++G LG GD + S+P+ + + +K + + + + G H+ A+
Sbjct: 452 CGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDG--HSLALT----------- 498
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
++G++++WGDGD G+LGHG + +P V LV V+ G+ + A+T G +Y
Sbjct: 499 -TTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELY 557
Query: 322 TMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGA 379
T G +G+LG+ K P +V+ S V +ACG H +AV ++++G G
Sbjct: 558 TWGDGEFGRLGHDYTSSKNFPTKVQ---SIESVGLVACGGSHTLAVSQDGKTIWSFGGGE 614
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
NG+LGHGDT+ + P ++EAL ++ +ACG+ + A+ L+ W
Sbjct: 615 NGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAW 662
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 193/388 (49%), Gaps = 45/388 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNR---VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA- 88
G V WG G DG LG G V + D + P + S V+ CG H
Sbjct: 39 GVVCSWGRGE-DGQLGHGDAEDRPVPTVLTAAFDDA-PGGVASVVI-------CGADHTT 89
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
A +++ +++SWG GRLGHG SDV +P+ I AL + I +ACG+ H AVT++G
Sbjct: 90 AYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGH 149
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++W G G LG GN +P+++ EG+ V I+ G HTA VT G L+ +G
Sbjct: 150 VHSW--GRNQNGQLGLGNTEDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWG 206
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G +G LG GDR IP +V S+ G + V ACG HT V SSG +
Sbjct: 207 WGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTITV------------SSSGSI 254
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAAL----------VEPNFCRVA-----CGHSLTVA 313
+T+G G+LGHGD E LVP + AL VE F + G + A
Sbjct: 255 YTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWA 314
Query: 314 LTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
L G +Y G +GQ+G D P +V + V ++ACG H LT V
Sbjct: 315 LAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVV-QVACGWRHTLALTEAKNV 373
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEAL 400
++WG+G +G+LGHG+ DRN P +++AL
Sbjct: 374 FSWGRGTSGQLGHGEIVDRNIPKMIDAL 401
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 188/380 (49%), Gaps = 39/380 (10%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D ++P+A E +VVL I+ G H+ + G V SWG G+LGHG D P ++
Sbjct: 11 DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66
Query: 123 DALSNMN----IELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
A + +V CG HT A + LY+WG G +FG LGHGN + P+ +
Sbjct: 67 TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWG--DFGRLGHGNSSDVFNPQPIQ 124
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L+G+ ++ I+CG H VT AG + ++G G LG G+ + +P+++++ +G+R
Sbjct: 125 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A G HTAAV E G L+ WG G G LG GD++ +L+P V+++
Sbjct: 184 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 231
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEI 356
VACG T+ +++SG +YT G YGQLG+ D +P+++E + +E
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEE 291
Query: 357 AC--------------GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
A G L + ++Y WG G++G GD +D SP V +
Sbjct: 292 AVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNE 351
Query: 403 KQVKSIACGTNFTAAICLHK 422
++V +ACG T A+ K
Sbjct: 352 QKVVQVACGWRHTLALTEAK 371
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGG 85
D+G +G W + G G N+ G G D P + V +ACG
Sbjct: 302 DEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGW 361
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
RH + + VFSWG + G+LGHG D PK+IDALS+
Sbjct: 362 RHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALSS 403
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 185/373 (49%), Gaps = 24/373 (6%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+ D V WG T + GGL + +LP+ + S ++V +IACG +
Sbjct: 3 ETADLKSSVLCWGSLTHGQLGLGGLE--------EETVTLPREIRSFCNVEVVHIACGLQ 54
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H V K G V S G G+LGH + P LID+L N+ + G H+ +T +
Sbjct: 55 HTLFVKKDGRVLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDA 112
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G ++TWG N G + S +P+ V G L V ++CG HT +T+ GQ++T
Sbjct: 113 GQVFTWGSNEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQVACGSAHTVGLTATGQIYT 171
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G G LG ++ + P+ V + GL VR A G H + SG
Sbjct: 172 WGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT------------ISG 219
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
LF WG G+LG GD + + PT V L C +ACG ++ALT G V+T G+
Sbjct: 220 ALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAG 279
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGH 385
+YGQLG+ ++ +L R +L S V +IACG H +A + S VY +G G NG+LG
Sbjct: 280 MYGQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGT 339
Query: 386 GDTDDRNSPSLVE 398
G T +R SP++V+
Sbjct: 340 GSTVNRMSPAMVK 352
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 151/326 (46%), Gaps = 23/326 (7%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
V WG + G+LG G + V P+ I + N+ + +ACG HT V G + + G+
Sbjct: 11 VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LGH P ++ L +V S G H+ V+T AGQ+FT+G
Sbjct: 71 NDY--GQLGHEKPCKR--PALIDS-LGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQ 125
Query: 215 LGHG--DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG G D S SIPR V L + V+ ACG HT + ++G+++TWG
Sbjct: 126 LGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT------------ATGQIYTWG 173
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+ G+LG +K + P V+ + RVA G + LT SG ++ G +GQLG
Sbjct: 174 SNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG 233
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
D P V+ L + +ACG H LT V+T+G G G+LGH +++
Sbjct: 234 VGDDQDRGAPTLVK-TLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNE 292
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAA 417
P V L V IACG + A
Sbjct: 293 LLPRKVFELMGSSVTQIACGRKHSIA 318
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 25/280 (8%)
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
L + WG T+ LG E + +P+ + + V I+CG HT V G++
Sbjct: 7 LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRS-FCNVEVVHIACGLQHTLFVKKDGRV 65
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+ G+ +G LGH K P ++SL ++A+ G H+ + +
Sbjct: 66 LSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTD------------ 111
Query: 265 SGKLFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+G++FTWG + +LG G D + +P V L + +VACG + TV LT +G +YT
Sbjct: 112 AGQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYT 171
Query: 323 MGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
GS +GQLG PQ + + + + G + +A G+ H VLT ++ WG
Sbjct: 172 WGSNNHGQLGLANKTPQNEPQWVSCISGLP----IVRVAAGADHNLVLTISGALFAWGCN 227
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ G+LG GD DR +P+LV+ L+++ + ++ACG + + A+
Sbjct: 228 SFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLAL 267
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 20/222 (9%)
Query: 204 LFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
+ +G T G LG G + ++V++PRE+ S + V ACG+ HT V +
Sbjct: 11 VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKK--------- 61
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
G++ + G+ D G+LGH +K K P + +L E N + + G + LT +G V+
Sbjct: 62 ---DGRVLSCGNNDYGQLGH-EKPCKR-PALIDSLGERNVLQASSGTKHSTVLTDAGQVF 116
Query: 322 TMGSPVYGQLGNPQADG---KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
T GS QLG Q D +P V G L+ V ++ACGS H LT+ ++YTWG
Sbjct: 117 TWGSNEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQVACGSAHTVGLTATGQIYTWGSN 175
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+G+LG + +N P V + + +A G + + +
Sbjct: 176 NHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTI 217
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 207/406 (50%), Gaps = 29/406 (7%)
Query: 17 VSSSSQGSGHDD--GDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAV 74
V + S+ S H D+ VF+WG D + GGL G K+ +P ES
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKVFVWGLNDKDQL--GGLK------GSKV--KVPVYSESLT 3016
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
L +IA G + +V+ G++++ GE + GRLG G ++V P + +L+ I+ VA
Sbjct: 3017 ALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVA 3076
Query: 135 C--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G H A+TL G +++WG+G G LGH N +S PK + L+ + I+CG
Sbjct: 3077 VHSGGKHAMALTLDGKVFSWGEG--EDGKLGHDNRLSLDRPKMIEA-LKSKRIRDIACGS 3133
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+A ++S G+LFT+G G +G LGHGD + P+ V++L G V+ ACG +
Sbjct: 3134 SHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTL-- 3191
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
+ + G +F+WGDGD G+LG G E +P + L C + CG ++
Sbjct: 3192 --------ALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSL 3243
Query: 313 ALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G VYT G Y +LG+ + P VE LS+ + +A G+ H T + +
Sbjct: 3244 ALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVES-LSEKKIVHVAVGALHCLCATDQGQ 3302
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
VY WG +G+ G+G PSLV L+ +V +ACG++ + A
Sbjct: 3303 VYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIA 3348
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 151/300 (50%), Gaps = 19/300 (6%)
Query: 67 PKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
P LES + ++ +A GG+H ++ G+V+SWGE G+LGHG + HP+LIDA
Sbjct: 4044 PTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDA 4103
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L I +ACG H+ AVT G++YTWG G Y G LGHG+ PK V L G
Sbjct: 4104 LQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRY--GRLGHGDSEDQMKPKLVE-TLIGFK 4160
Query: 185 VSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
V I+CG T +T ++++GDG +G LG G IP ++ESL GL V+ C
Sbjct: 4161 VIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVEC 4220
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G + A+ SG ++TWG GD RLGHG E P +AAL
Sbjct: 4221 GSQFSVALTR------------SGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKII 4268
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+A G VA + G V+T G GQLG+ + R+ L + +ACGS H
Sbjct: 4269 CIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAH 4328
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 168/343 (48%), Gaps = 30/343 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G ++ GEGT +G LG G + + P L S ++ +A GG+HA
Sbjct: 3037 GKLYACGEGT-NGRLG---------LGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMA 3086
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + PK+I+AL + I +ACG H+ A++ +G+L+
Sbjct: 3087 LTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELF 3146
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ ++ PK V L G H+ ++CG T +++ G +F++G
Sbjct: 3147 TWGLGEY--GRLGHGDNLTQLRPKLVKALL-GHHIVQVACGSRDAQTLALSAEGLVFSWG 3203
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + IP +E L GL CG + A+ + G++
Sbjct: 3204 DGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKF------------GQV 3251
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG + PT V +L E VA G + T G VY G +
Sbjct: 3252 YTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDH 3311
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKT 370
GQ GN + L V +ACGS H +A TS T
Sbjct: 3312 GQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTSDT 3354
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 199/388 (51%), Gaps = 24/388 (6%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
WG G+G + G G N G GV+ +P + E+ L + G + V
Sbjct: 3962 LTWG-GSG-TIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSD 4019
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G+V++ G +GGRLG G +L P L++++ ++ I+ VA G H A++ G +Y+W
Sbjct: 4020 GKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSW 4079
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G + G LGHGN+ P+ ++ L+G + I+CG H+A VT+ G+++T+G G +
Sbjct: 4080 GEG--DDGKLGHGNKNGCDHPQLIDA-LQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRY 4136
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHGD + P+ VE+L G + + ACG T + + +++
Sbjct: 4137 GRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITD------------DDNVWS 4184
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + +P + +L +V CG +VALT SG VYT G Y +
Sbjct: 4185 WGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHR 4244
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + + P ++ K + IA GS H + EV+TWG G+LG G +
Sbjct: 4245 LGHGSDEHVRHPKKIAALQGKKII-CIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMN 4303
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P LV L+ K + +ACG+ + A
Sbjct: 4304 AIHRPRLVVTLQGKNINRVACGSAHSLA 4331
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 155/297 (52%), Gaps = 27/297 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G N+ G P+ +++ ++ +IACGG H+A V
Sbjct: 4074 GKVYSWGEG-DDGKLGHG-NKNGC--------DHPQLIDALQGKEIVDIACGGAHSAAVT 4123
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG+ GRLGHG D + PKL++ L + +ACG + T +T +++
Sbjct: 4124 AGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVW 4183
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4184 SWGDGDY--GKLGRGGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGSVYTWGKG 4240
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P+++ +L+G + + A G H A ++ G++FT
Sbjct: 4241 DYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDL------------GEVFT 4288
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WGD D+G+LG G A P V L N RVACG + ++A +T+ PV
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSATHLPV 4345
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 115/354 (32%), Positives = 179/354 (50%), Gaps = 27/354 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P++ +S L V+ I C R ++ G+V+ S+ P+ I+
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYI----------MYYSSETQCPEQIEGFD 517
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I +A H+ A++ GD+Y+WG+G + G LGHG+ S P ++ L G +
Sbjct: 518 GKEISKLAAHADGKHSLALSCDGDVYSWGNG--DGGRLGHGDNNSRDQPTKIT-ELVGKN 574
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V ISCG ++A VTS+G+++T+G G +G LGHG + ++P V LK V ACG
Sbjct: 575 VIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACG- 633
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
+ + V N+ G +F+WGDG G+LG G + P + L + RV
Sbjct: 634 --SGDAQTLAVTNT-------GLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARV 684
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
CG ++ALT SG VYT G +LG+ + + P VEG L+ ++++A GS HV
Sbjct: 685 YCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG-LNGKCIKKVAVGSGHV 743
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
LT EVY WG+ NG++G + + P+L+ L+ K + I CG N + A
Sbjct: 744 LALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA 797
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 156/305 (51%), Gaps = 31/305 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+ D++ + ++ + C E +TL+G +Y ++ + +E P+++ G
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVY----------IMYYSSETQ--CPEQIEG 515
Query: 179 PLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
+G +S ++ H+ ++ G ++++G+G G LGHGD S P ++ L G
Sbjct: 516 -FDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKN 574
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ +CG ++AAV SSG+++TWG G+ GRLGHG E VPT V L
Sbjct: 575 VIHISCGATYSAAVT------------SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGL 622
Query: 297 VEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFV 353
+ +ACG + T+A+T +G V++ G YG+LG +DG K P +E KL V
Sbjct: 623 KDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIE-KLQDIEV 681
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+ CGS LT VYTWGKG N RLGHG + P LVE L K +K +A G+
Sbjct: 682 ARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG 741
Query: 414 FTAAI 418
A+
Sbjct: 742 HVLAL 746
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 144/305 (47%), Gaps = 33/305 (10%)
Query: 21 SQGSGHDDGD---AL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAV 74
S+ + H DG AL GDV+ WG G G G LG G N P + V
Sbjct: 522 SKLAAHADGKHSLALSCDGDVYSWGNGDG-GRLGHGDNN---------SRDQPTKITELV 571
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
+V +I+CG ++A V GEV++WG + GRLGHG D P L+ L + I +A
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIA 631
Query: 135 CG--EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
CG + T AVT +G +++WGDG Y G + PK + L+ I V+ + CG
Sbjct: 632 CGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSK--TPKLIE-KLQDIEVARVYCGS 688
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+ +T +G ++T+G G LGHG V P+ VE L G + A G H A+ +
Sbjct: 689 QFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTD 748
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G+++ WG D G++G + PT + L N + CG + ++
Sbjct: 749 ------------DGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSI 796
Query: 313 ALTTS 317
A ++S
Sbjct: 797 AWSSS 801
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 15/241 (6%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L+ IH++ G +V+ G+L+ G+GT G LG G +V+ P ++ SL +
Sbjct: 3018 LKPIHIAG---GSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKK 3074
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A H+ G + + GK+F+WG+G+ G+LGH ++ + P + AL
Sbjct: 3075 VAV---HSG-------GKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSK 3124
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
+ACG S + A++++G ++T G YG+LG+ +L ++ L + ++ACG
Sbjct: 3125 RIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACG 3184
Query: 360 SYHVAVLTSKTE--VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
S L E V++WG G G+LG G ++ + P +E L V I CG F+ A
Sbjct: 3185 SRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLA 3244
Query: 418 I 418
+
Sbjct: 3245 L 3245
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V IP E+L LR V+ G AV
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVT--------- 4017
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
S GK++ G G GRLG G + L PT + ++ +VA G +AL+T G
Sbjct: 4018 ---SDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDG 4074
Query: 319 HVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY+ G G+LG+ +G P ++ K V+ IACG H A +T+ E+YTWGK
Sbjct: 4075 KVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVD-IACGGAHSAAVTAGGEIYTWGK 4133
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G GRLGHGD++D+ P LVE L +V IACG+ +C+
Sbjct: 4134 GRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCI 4176
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
S ++F +G LG V +P ESL L+ + A G S
Sbjct: 2983 SPTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGG------------SKSL 3030
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTS 317
GKL+ G+G GRLG G P + +L + +VA G +ALT
Sbjct: 3031 FIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLD 3090
Query: 318 GHVYTMGSPVYGQLGNPQADGKL----PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G V++ G G+LG+ D +L P +E SK + +IACGS H A ++S E++
Sbjct: 3091 GKVFSWGEGEDGKLGH---DNRLSLDRPKMIEALKSKR-IRDIACGSSHSAAISSTGELF 3146
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
TWG G GRLGHGD + P LV+AL + +ACG+ + L
Sbjct: 3147 TWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLAL 3193
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 193/356 (54%), Gaps = 18/356 (5%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDA 124
+P E+ L+V +A G + V +G+V++ GE + GRLG G+ S V P+ + A
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTA 1346
Query: 125 LSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
LS+ ++ VA G H A+T+ G +++WG+G + G LGH + ++ P+ + L+
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 1403
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ I+CG H+A +TS+G+L+T+G G +G LGHGD + P+ V+ L G R V+ AC
Sbjct: 1404 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G + + G +F+WGDGD G+LG G E +P + L C
Sbjct: 1464 GSRDAQTL----------ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 1513
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSY 361
++ CG ++ALT SG V+T G Y +LG+ + P VEG K V +A G+
Sbjct: 1514 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVGAL 1572
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H +T +VY WG +G+ G+G T P+LV+ L+ +++ +ACG++ + A
Sbjct: 1573 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 2258 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKL 2314
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 2315 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 2374
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHG+ P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 2375 --EDGKLGHGSRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 2431
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 2432 GHSDSEDQLKPKLVEALQGHRVVGIACG------------SGDAQTLCLTDDDTVWSWGD 2479
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L RV CG +VALT +G VYT G Y +LG+
Sbjct: 2480 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGH 2539
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 2540 GSDDHVRRPRQVQGLQGKKAIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 2598
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 2599 RPRLVAALQGKKVNRVACGSAHTLA 2623
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 170/342 (49%), Gaps = 32/342 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK---ALESAVVLDVQNIACGGRHAA 89
G V+ GE T +G LG GL+ G+ LP+ AL S VV V + GGRHA
Sbjct: 1316 GKVYACGEAT-NGRLGLGLSS-GTV-------PLPRQVTALSSYVVKKVA-VHSGGRHAT 1365
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+L
Sbjct: 1366 ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL 1425
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTF 207
YTWG G Y G LGHG+ + PK V L G V ++CG T +T G +F++
Sbjct: 1426 YTWGLGEY--GRLGHGDTTTQLKPKMVK-VLLGHRVVQVACGSRDAQTLALTDEGLVFSW 1482
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
GDG FG LG G + +IP+ +E L G + CG + A+ + SG
Sbjct: 1483 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGV 1530
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG GD RLGHG P V L VA G +A+T SG VY G
Sbjct: 1531 VWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDND 1590
Query: 328 YGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+GQ GN + P V+G L + +ACGS H T+
Sbjct: 1591 HGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 1631
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 159/306 (51%), Gaps = 22/306 (7%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVN 177
P + LS +N+ VA G AVT+ G +Y G+ T G LG G + + +P++V
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATN--GRLGLGLSSGTVPLPRQVT 1345
Query: 178 GPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
L V ++ G H +T G++F++G+G G LGH R + PR +E+LK
Sbjct: 1346 A-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK 1404
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
R ACG H+AA+ SSG+L+TWG G+ GRLGHGD +L P V
Sbjct: 1405 RIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDTTTQLKPKMVKV 1452
Query: 296 LVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSF 352
L+ +VACG + T+ALT G V++ G +G+LG ++G +P +E +L+
Sbjct: 1453 LLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQG 1511
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
V +I CG+ LT V+TWGKG RLGHG P +VE L+ K++ +A G
Sbjct: 1512 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 1571
Query: 413 NFTAAI 418
A+
Sbjct: 1572 LHCLAV 1577
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 1371 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 1420
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG + L PK++ L + VACG + T A+T G ++
Sbjct: 1421 SSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVF 1480
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 1481 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 1540
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT +GQ++ +GD G G+G
Sbjct: 1541 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTT 1599
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V V S
Sbjct: 1600 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVATPS 1638
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 119/240 (49%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V IACG A
Sbjct: 2416 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVGIACGSGDAQT 2465
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T +G
Sbjct: 2466 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGA 2525
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G +I+ G H T G+++T+G
Sbjct: 2526 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKAIAIATGSLHCVCCTEDGEVYTWG 2582
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 2583 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 2635
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 128/279 (45%), Gaps = 23/279 (8%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG +Y WG + G LG VP L + + G VT+ G+L+
Sbjct: 2259 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKLY 2315
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC-- 263
G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 2316 ATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHCLA 2361
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S G++++WG+ + G+LGHG + P + +L VA G + + +T +G +Y
Sbjct: 2362 LSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLY 2421
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGA 379
T G YG+LG+ ++ +L ++ L V IACGS LT V++WG G
Sbjct: 2422 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWGDGD 2481
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 2482 YGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVAL 2520
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 2259 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT--------- 2309
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 2310 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 2427 RYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
D ++ +P E+L L V+ A G AV GK++ G+ GR
Sbjct: 1281 DLAAIKVPSFSETLSALNVVQVAGGSKSLFAVT------------VEGKVYACGEATNGR 1328
Query: 279 LGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGN-P 334
LG G + +P V AL +VA G ALT G V++ G G+LG+
Sbjct: 1329 LGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFS 1388
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+ + P +E L + +IACGS H A LTS E+YTWG G GRLGHGDT + P
Sbjct: 1389 RMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKP 1447
Query: 395 SLVEALKDKQVKSIACGTNFTAAICL 420
+V+ L +V +ACG+ + L
Sbjct: 1448 KMVKVLLGHRVVQVACGSRDAQTLAL 1473
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 193/356 (54%), Gaps = 18/356 (5%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDA 124
+P E+ L+V +A G + V +G+V++ GE + GRLG G+ S V P+ + A
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTA 2745
Query: 125 LSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
LS+ ++ VA G H A+T+ G +++WG+G + G LGH + ++ P+ + L+
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 2802
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ I+CG H+A +TS+G+L+T+G G +G LGHGD + P+ V+ L G R ++ AC
Sbjct: 2803 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2862
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G + + G +F+WGDGD G+LG G E VP + L C
Sbjct: 2863 GSRDAQTL----------ALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVC 2912
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSY 361
++ CG ++ALT SG V+T G Y +LG+ + P VEG K V +A G+
Sbjct: 2913 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH-VAVGAL 2971
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H +T +VY WG +G+ G+G T P+LV+ L+ +++ +ACG++ + A
Sbjct: 2972 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 189/372 (50%), Gaps = 40/372 (10%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V IAC + ++++ G V++ +SD L P+L+ L++ NI +A
Sbjct: 452 LGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLASRNIVKIAA 501
Query: 136 GE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLEGIHVSSISC 190
+H A+ +G++Y+WG G + G LGHG+ V PK ++ G G HV I+C
Sbjct: 502 HSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + ACG +
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ +G++++WGDGD G+LG G + P + L + + +V CG
Sbjct: 620 ----------AVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 311 TVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+VALT G VY+ G +LG+ + + P +E K ++ +A GS H LT
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVID-VAAGSTHCLALTED 728
Query: 370 TEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV 427
+EV++WG N + H DT + PSL+ L K + IACG + A W S
Sbjct: 729 SEVHSWGN--NDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA-----WSSCS 781
Query: 428 DQSMCSGCRLPF 439
+ S+ G R+PF
Sbjct: 782 EWSV--GLRVPF 791
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 166/339 (48%), Gaps = 26/339 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G++ G AL S VV V + GGRHA +
Sbjct: 2715 GKVYACGEAT-NGRLGLGMSS-----GTVPIPRQVTALSSYVVKKVA-VHSGGRHATALT 2767
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 2768 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 2827
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 2828 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2884
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + ++P+ +E L G + CG + A+ + SG ++T
Sbjct: 2885 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2932
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG P V L VA G +A+T +G VY G +GQ
Sbjct: 2933 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQ 2992
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
GN + P V+G L + +ACGS H T+
Sbjct: 2993 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3030
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 162/311 (52%), Gaps = 22/311 (7%)
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWV 172
+++ P + LS +N+ VA G AVT+ G +Y G+ T G LG G + + +
Sbjct: 2682 TEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATN--GRLGLGMSSGTVPI 2739
Query: 173 PKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
P++V L V ++ G H +T G++F++G+G G LGH R + PR +E
Sbjct: 2740 PRQVTA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIE 2798
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+LK R ACG H+AA+ SSG+L+TWG G+ GRLGHGD +L P
Sbjct: 2799 ALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKP 2846
Query: 291 TCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGK 347
V L+ +VACG + T+ALT G V++ G +G+LG ++G +P +E +
Sbjct: 2847 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIE-R 2905
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
L+ V +I CG+ LT V+TWGKG RLGHG P +VE L+ K++
Sbjct: 2906 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2965
Query: 408 IACGTNFTAAI 418
+A G A+
Sbjct: 2966 VAVGALHCLAV 2976
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 166/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKCYANVIGPIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQA-- 477
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 478 -YNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + +A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+EAL+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 138/271 (50%), Gaps = 23/271 (8%)
Query: 63 DSSLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D+ P+ ++ ++ IA G H + GEV+SWG GGRLGHG + PK
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540
Query: 121 LIDALSNM----NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
+I A S ++ +ACG ++ A+T G+LYTWG G N+G LGHG+ +P V
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLV 598
Query: 177 NGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
G L+G+ V ++CG VT GQ++++GDG +G LG G P+ +E L+
Sbjct: 599 AG-LKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
L V+ CG + A+ + G++++WG GD RLGHG +E P +
Sbjct: 658 LDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
AL VA G + +ALT V++ G+
Sbjct: 706 ALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 163/375 (43%), Gaps = 71/375 (18%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G ++ WG G+LG + V P +AL+ + + GE AVT G LY G
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3690
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HV----SSISCGPWHTAVVTSAGQLFTFGD 209
G +G VS P LE I HV +++ G H ++S G+++++G+
Sbjct: 3691 GAGGRLGVGGTESVS--APTL----LESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGE 3744
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGHG+R PR VESL+G V A G H+A V S+G L+
Sbjct: 3745 AEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVT------------SAGDLY 3792
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G GRLGH D E +L P V AL VACG + T+ LT V++ G
Sbjct: 3793 TWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGD 3852
Query: 328 YGQLGNPQADG---------------------------------------------KLPN 342
YG+LG +DG + P
Sbjct: 3853 YGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPR 3912
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
+V+G K + IA GS H T + EVYTWG G+LG G T+ P LV AL+
Sbjct: 3913 QVQGLQGKKVIA-IATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 3971
Query: 403 KQVKSIACGTNFTAA 417
++V +ACG+ T A
Sbjct: 3972 RKVNRVACGSAHTLA 3986
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 150/314 (47%), Gaps = 50/314 (15%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES +V +IA GG H+A V
Sbjct: 3737 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVVESLRGTEVVDIAAGGAHSACVT 3786
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VAC G+ T +T ++
Sbjct: 3787 SAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 3846
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +V PL + V S P S +L G G
Sbjct: 3847 SWGDGDY--GKLGRGGSDGCKVPMKV--PL-SLRVGRPSTPP------PSWPRLDVGGKG 3895
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3896 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------EGEVYT 3943
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 3944 WGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWSTS------------- 3990
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 3991 --KPASAGKLPAQV 4002
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 139/302 (46%), Gaps = 27/302 (8%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
S P LES + ++ +A GG+H ++ +GEV+SWGE G+LGHG S P+++
Sbjct: 3705 SAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVV 3764
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L + +A G H+ VT +GDLYTWG G Y G LGH + PK V L+G
Sbjct: 3765 ESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQG 3821
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
V ++CG T +T ++++GDG +G LG G +P +V
Sbjct: 3822 HRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVP---------- 3871
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+ + VG S+ S +L G GD RLGHG + P V L
Sbjct: 3872 ----------LSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3921
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G V T G VYT G GQLG+ + R+ L V +ACGS
Sbjct: 3922 VIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGS 3981
Query: 361 YH 362
H
Sbjct: 3982 AH 3983
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 41/307 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 552
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 553 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 607
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 608 DVACGSGDAQPLAVTDNGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 664
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E+L+G + + A G H A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLA 724
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG+ D+ + + K P+ + L + +ACG +
Sbjct: 725 LTE------------DSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPA 772
Query: 310 LTVALTT 316
+ A ++
Sbjct: 773 QSFAWSS 779
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 121/279 (43%), Gaps = 63/279 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ +++IACG H+A +
Sbjct: 2770 GKVFSWGEGD-DGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT 2819
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG GRLGHG ++ L PK++ L + VACG + T A+T G ++
Sbjct: 2820 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2879
Query: 151 TWGDGTY--------------------------------------------------NFG 160
+WGDG + ++
Sbjct: 2880 SWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 2939
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHG++V P+ V G L G + ++ G H VT AGQ++ +GD G G+G
Sbjct: 2940 RLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTT 2998
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
P V+ L+G + R ACG H+ A V + S
Sbjct: 2999 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMATPS 3037
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3630 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3680
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3681 ---ADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 3737
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L + V +IA G H A +TS ++YTWGKG
Sbjct: 3738 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKG 3797
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 3798 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 3839
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D T +L D + +P E+L L V+ A G + ++ V V GK+
Sbjct: 2672 DTTVSLLS--DCTEIKVPSFSETLSALNVVQVAGG---SKSLFAVTV---------EGKV 2717
Query: 269 FTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGS 325
+ G+ GRLG G + +P V AL +VA G ALT G V++ G
Sbjct: 2718 YACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGE 2777
Query: 326 PVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G GRLG
Sbjct: 2778 GDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 2836
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
HGD + P +V+ L +V +ACG+ + L
Sbjct: 2837 HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2872
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 196/392 (50%), Gaps = 40/392 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
D ++WG G G L G V ++ K+L SA Q + CG +V
Sbjct: 489 DAYLWGGGRH-----GQLAESGRGVNV---PTVTKSLASA-----QQVVCGQNCTFVVQV 535
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G + + GE S GRLG G D+ I AL + +A + H+ A+T SG+++
Sbjct: 536 NGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVF 595
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L G V +++CG H+AVVT G+LFTFG+G
Sbjct: 596 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LRGEEVVNMACGFKHSAVVTVDGKLFTFGNG 652
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGHG+ + P V +L+ + ACG+ HT + + ++
Sbjct: 653 DYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVL-----------SADGNTVWA 701
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY-- 328
+GDGD G+LG G AK P + L ++ CG +V LT G V++ G
Sbjct: 702 FGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTG 761
Query: 329 ---GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
G+L PQ P +++ L+ F++++ G+ HV LTS EV+ WG +G+LG
Sbjct: 762 QPEGRLRGPQK----PQQIQA-LASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGL 816
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G ++ + P ++ LK K ++ I+ G N +AA
Sbjct: 817 GHSNAQREPCVIPDLKGKNIRQISAGRNHSAA 848
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 156/334 (46%), Gaps = 18/334 (5%)
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
AL+ VV+ + H+ + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 566 ALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGE 625
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
+ +ACG H+ VT+ G L+T+G+G Y G LGHGN + P+RV LE + +
Sbjct: 626 EVVNMACGFKHSAVVTVDGKLFTFGNGDY--GRLGHGNSANKKTPERVTA-LEKHAIGQV 682
Query: 189 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+CG HT V+++ G ++ FGDG +G LG G + + P+ ++ L G+ + CG +
Sbjct: 683 ACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFS 742
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
+ + G++F++G G P + AL V G
Sbjct: 743 VVLT------------NDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDDVCVG 790
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ALT++G V+ G+ V GQLG ++ + V L + +I+ G H A T
Sbjct: 791 AEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWT 850
Query: 368 SKTEVYTWGKGANG--RLGHGDTDDRNSPSLVEA 399
+ + GA +LGH + P+L E
Sbjct: 851 APPPPPRFPPGAPMPLQLGHPEHTPPQFPALAEV 884
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 30/279 (10%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS---ISCGPWHTAVVTSAGQL 204
D Y WG G + G L + VN P ++S + CG T VV G +
Sbjct: 489 DAYLWGGGRH--GQLAESG-------RGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTI 539
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW---HTAAVVEVMVGNSSSS 261
G+G++G LG G+ + + +L+G ++ A H+ A+ +
Sbjct: 540 LACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTD--------- 590
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
SG++F+WGDGD G+LGHG+ + + P + AL +ACG + +T G ++
Sbjct: 591 ---SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLF 647
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWGKGA 379
T G+ YG+LG+ A+ K P RV L K + ++ACG H VL++ V+ +G G
Sbjct: 648 TFGNGDYGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSADGNTVWAFGDGD 706
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + SP ++ L K I CGT F+ +
Sbjct: 707 YGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVL 745
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 41/322 (12%)
Query: 7 DAFRVSLSSAVS-------SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRV 54
D F +S SA+ ++S+GS DG +L G+VF WG+G + G +R
Sbjct: 557 DLFTLSPISALQGYVVIQIATSRGS---DGHSLALTDSGEVFSWGDGDYGKLGHGNSDR- 612
Query: 55 GSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS 114
P+ +E+ +V N+ACG +H+A+V G++F++G GRLGHG +
Sbjct: 613 ---------QRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSA 663
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD-LYTWGDGTYNFGLLGHGNEVSHWVP 173
+ P+ + AL I VACG HT ++ G+ ++ +GDG Y G LG G+ + P
Sbjct: 664 NKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDY--GKLGLGSCTAKTSP 721
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK 233
+ ++ L GI I CG + V+T+ G++F+FG G + P+++++L
Sbjct: 722 QAID-VLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALA 780
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
G H A+ S+G+++ WG+ G+LG G A+ P +
Sbjct: 781 SHFIDDVCVGAEHVLALT------------STGEVWGWGNNVDGQLGLGHSNAQREPCVI 828
Query: 294 AALVEPNFCRVACGHSLTVALT 315
L N +++ G + + A T
Sbjct: 829 PDLKGKNIRQISAGRNHSAAWT 850
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 194/394 (49%), Gaps = 37/394 (9%)
Query: 47 LGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGG 106
L G R+ F +S P+ + S L ++ I CG H ++ G++ SWG G
Sbjct: 81 LTAGATRIHGRFST-YNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESG 139
Query: 107 RLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
+LGH S P +ID L++ ++ VACG + A+ G LYTWG Y G LG G+
Sbjct: 140 QLGHASFSHSSTPSIIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRY--GQLGQGD 197
Query: 167 EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI- 225
S +P R+ + HV ++CG H V+T++ ++T+G+ ++G LGHG RK +
Sbjct: 198 RTSSAIP-RMLPSMNHRHVHLMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQ 256
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P+ V + GL + G H+ + S G ++TWG GD G+LGHGD E
Sbjct: 257 PKSVRVMSGLDIKQIVAGENHSCVMT------------SFGDIYTWGRGDFGQLGHGDME 304
Query: 286 AKLVPTCVAAL-VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-----NPQADGK 339
+K +PT ++ L + + G +A+T SG VY+ G +GQLG + +
Sbjct: 305 SKDIPTLLSPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNR 364
Query: 340 LPNRVEGKLSKSF-----------VEEIACGSYHVAVLTSKTE-VYTWGKGANGRLGHG- 386
P+ V SF + I+CGS+HV +T K + ++ WG+G +G+LG
Sbjct: 365 FPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDP 424
Query: 387 -DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
DT R P V+ +K V + AC N + +
Sbjct: 425 RDTSFRPIPQEVKKMKGMIVLAAACSENHSVVVA 458
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 187/403 (46%), Gaps = 55/403 (13%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
DA G + WG G G LG + F SS P ++ V+ +ACG +A
Sbjct: 125 DASGKIRSWGRGE-SGQLGH------ASFS---HSSTPSIIDELASQRVKEVACGVAFSA 174
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ + G++++WG G+LG G + P+++ ++++ ++ L+ACG H +T S D+
Sbjct: 175 ALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIVVLTTSRDV 234
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
YTWG+ +Y G LGHG H + + + G+ + I G H+ V+TS G ++T+G
Sbjct: 235 YTWGNNSY--GQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGR 292
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G FG LGHGD +S IP + L T A + V + + SG ++
Sbjct: 293 GDFGQLGHGDMESKDIPTLLSPLDP-----------KTQASLIVSGADFIMAMTYSGAVY 341
Query: 270 TWGDGDKGRLGHG-------------DKEAKLVPTCVAALVEPN---FCRVACGHSLTVA 313
+WG G+LGHG D + + + AA E + ++CG +A
Sbjct: 342 SWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSSISCGSHHVLA 401
Query: 314 LTTSGH-VYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTS- 368
+T ++ G +GQLG D +P V+ K+ V AC H V+ +
Sbjct: 402 ITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVK-KMKGMIVLAAACSENHSVVVATM 460
Query: 369 -------KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
+V++WG+G+ G+LG+G P + E ++D Q
Sbjct: 461 PGSGPKGDMKVFSWGRGSFGQLGYGSG---KVPVMKETVQDNQ 500
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 39/233 (16%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQN--IACGGRHA 88
+ GD++ WG G G LG G M+S L S + Q I G
Sbjct: 283 SFGDIYTWGRGDF-GQLGHG----------DMESKDIPTLLSPLDPKTQASLIVSGADFI 331
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVD----------SDVLHPKLIDALSN------MNIEL 132
+ G V+SWG G+LGHGVD SDV+ PK+I + +++
Sbjct: 332 MAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDAISLSS 391
Query: 133 VACGEYHTCAVTLSGD-LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
++CG +H A+T D L+ WG G + L + +P+ V ++G+ V + +C
Sbjct: 392 ISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVK-KMKGMIVLAAACS 450
Query: 192 PWHTAVVTSAG--------QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
H+ VV + ++F++G G+FG LG+G K + V+ +G +
Sbjct: 451 ENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGSGKVPVMKETVQDNQGAK 503
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 213/416 (51%), Gaps = 35/416 (8%)
Query: 14 SSAVSSSSQGSGHDDGDALGD----VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKA 69
++A + S S + D +L + V +WG + + GGL GS + SS+
Sbjct: 2869 TAAEPTYSTSSNYADDQSLNEISSKVLVWGLNDKEQL--GGLK--GSKVKLPTYSSVLSQ 2924
Query: 70 LESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN 129
L+ +IA G + +V++ G++++ GE + GRLG G +++V P+ + L+
Sbjct: 2925 LKPI------HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYV 2978
Query: 130 IELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
++ VA G H A+TL G +++WG+G G LGHGN ++ PK + L V
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGEG--EDGKLGHGNRLTLEKPKLIES-LRTKRVRD 3035
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
I+CG H+A +TS+G+L+T+G G +G LGHGD + P+ V +L+G R V+ ACG
Sbjct: 3036 IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACG---- 3091
Query: 248 AAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
+ + C G +F+WGDGD G+LG G E VP V L ++
Sbjct: 3092 --------SRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIE 3143
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
CG ++ALT SG V+T G Y +LG+ + P ++G K + +A G+ H
Sbjct: 3144 CGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCL 3202
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+T +VY WG +G+ G G+T P+LV L V +ACG++ + A L
Sbjct: 3203 AVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3258
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 201/400 (50%), Gaps = 28/400 (7%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSS---LPKALESAVVLDVQNIACGGRHAALVN 92
F WG + + G G N G G +D S +P E+ +L IA G + V
Sbjct: 3931 FSWGGAST--IFGWGHNHRGQLGG--LDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVT 3986
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++ G +GGRLG G V P L+++L ++ I+ VA G H A++ G+++
Sbjct: 3987 PDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVF 4046
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G G LGHGN S+ PK + L GI V I+CG H+A +TS G + T+G G
Sbjct: 4047 SWGEG--EDGKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLTWGKG 4103
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KL 268
+G LGHGD + P+ VE+L G R + ACG + + C + +
Sbjct: 4104 RYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNV 4151
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + +P + +L +V CG +VALT SG VYT G Y
Sbjct: 4152 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDY 4211
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V K + IA GS H + EV+TWG G+LG G
Sbjct: 4212 HRLGHGNTDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGT 4270
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV 427
P LV++L+ K + + CG+ T A+ ++ V
Sbjct: 4271 VTAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4310
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 154/288 (53%), Gaps = 31/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALV 91
G+VF WGEG DG LG G NR DS PK +E+ + V +IACG H+A +
Sbjct: 4043 GEVFSWGEGE-DGKLGHG-NR---------DSYDRPKLIEALSGIGVIDIACGSAHSACI 4091
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDL 149
QG V +WG+ GRLGHG D L PKL++AL +AC G+ T +T ++
Sbjct: 4092 TSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNV 4151
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G
Sbjct: 4152 WSWGDGDY--GKLGRGGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGK 4208
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKL 268
G + LGHG+ V P++V +L+G + + A G H A CS SG++
Sbjct: 4209 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEV 4255
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
FTWGD D+G+LG G A P V +L + +V CG + T+AL+T
Sbjct: 4256 FTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4303
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 145/284 (51%), Gaps = 24/284 (8%)
Query: 55 GSCFGVKMDSS---LPKALESAVVLDVQNIA--CGGRHAALVNKQGEVFSWGEESGGRLG 109
G F + +SS PKA E + V IA C G+H +++ EV+SWG GGRLG
Sbjct: 542 GQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLG 601
Query: 110 HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
HG HP +I L + + CG ++ A+T++G+L+TWG GTY G LGHGN
Sbjct: 602 HGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY--GRLGHGNSDD 659
Query: 170 HWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
VP +V L+ V ++ G H+ VT G LF +GDG FG LG+G IP
Sbjct: 660 KLVPTQVQA-LKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPV 718
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
++++L + R G + A+ +C G L+TWG G GRLGHG+ E
Sbjct: 719 QIDTL--VNVSRIYSGSQFSVAL-----------SC-DGTLYTWGKGHGGRLGHGNSEHS 764
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
VP V AL VA G + +ALT+SG +Y G Y Q+
Sbjct: 765 NVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 159/322 (49%), Gaps = 40/322 (12%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I+ S + + VAC E + +T G +++ H N + PK G LE
Sbjct: 517 IELPSTLQVRQVACTENNIYILTTGGQVFSL-----------HSNSSENIAPKAFEG-LE 564
Query: 182 GIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
G+HV I+ C H V++SA +++++G G G LGHGD S P + L +
Sbjct: 565 GVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCG 624
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG ++AA+ +G+LFTWG G GRLGHG+ + KLVPT V AL
Sbjct: 625 IYCGASYSAAIT------------IAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSY 672
Query: 300 NFCRVACG----HSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVE 354
VA G HS+ V T +G ++ G +G+LGN +G +P +++ ++ V
Sbjct: 673 KVVDVALGSGDAHSMCV--TDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN---VS 727
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
I GS L+ +YTWGKG GRLGHG+++ N P LV AL+ K++ +A G+
Sbjct: 728 RIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAH 787
Query: 415 TAAIC----LHKWVSGVDQSMC 432
A+ L+ W Q +C
Sbjct: 788 CLALTSSGELYGWGRNDYQQIC 809
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 13/180 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG GT G LG G + K+ + +AL+S V+DV + G H+ V
Sbjct: 639 GELFTWGRGTY-GRLGHGNS------DDKLVPTQVQALKSYKVVDVA-LGSGDAHSMCVT 690
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G +F+WG+ G+LG+G + P ID L +N+ + G + A++ G LYTW
Sbjct: 691 DNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTL--VNVSRIYSGSQFSVALSCDGTLYTW 748
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G + G LGHGN VPK V LEG ++ ++ G H +TS+G+L+ +G +
Sbjct: 749 GKG--HGGRLGHGNSEHSNVPKLVRA-LEGKKIADVAVGSAHCLALTSSGELYGWGRNDY 805
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 206/406 (50%), Gaps = 38/406 (9%)
Query: 9 FRVSLSSA-VSSSSQGSGHD-----DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKM 62
FR ++S V+S S GS H +G AL WG G DG LG G
Sbjct: 7 FRSAVSDLRVTSVSCGSSHSLALLSNGIALS----WGRGE-DGQLG---------HGDAE 52
Query: 63 DSSLPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+ P+A+ + + G ++ AL + EV+SWG GRLGHG +DV P+
Sbjct: 53 ERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQP 112
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I AL+ NI VACG+ HT AVT +G+L+++G G LG G +P+ V L
Sbjct: 113 IRALAGRNIVKVACGDTHTLAVTDTGELFSFGRN--QNGQLGLGTTSDAILPQPVES-LR 169
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G V+SI+CG H+ TSAG +F +G G +G LG G + +P +V L+G++ A
Sbjct: 170 GQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVA 229
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG H+ A E +G ++T+G G+LGHGD +LVP V +L +
Sbjct: 230 CGWRHSIAADE------------TGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRI 277
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G T A SG +Y+ G +GQLG D P V+G L+ S V+ ++CG
Sbjct: 278 VLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQG-LNTSPVKLLSCGW 336
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK 406
H +T +V++WG+G NG+LGH + D N+P + L +K
Sbjct: 337 RHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIK 382
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 172/362 (47%), Gaps = 22/362 (6%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V +++CG H+ + G SWG G+LGHG + P+ I L + V
Sbjct: 14 LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCS 73
Query: 136 G-EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G EY ++Y+WG G +FG LGHG+ ++P+ + L G ++ ++CG H
Sbjct: 74 GAEYSVALSQPRNEVYSWGWG--DFGRLGHGDCNDVFIPQPIRA-LAGRNIVKVACGDTH 130
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
T VT G+LF+FG G LG G +P+ VESL+G ACG H+ A
Sbjct: 131 TLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAAT--- 187
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
S+G +F WG G G LG G E + +P+ V L VACG ++A
Sbjct: 188 ---------SAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAA 238
Query: 315 TTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+G VYT G YGQLG+ D +P VE L S + IA G H + ++Y
Sbjct: 239 DETGAVYTFGWSKYGQLGHGDCIDQLVPKAVE-SLKDSRIVLIAGGWRHTSAADDSGKLY 297
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQ 429
+WG G+LG G D N+P V+ L VK ++CG T A+ + W GV+
Sbjct: 298 SWGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNG 357
Query: 430 SM 431
+
Sbjct: 358 QL 359
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 50 GLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G N+ G G DS+ P ++ V+ ++CG RH V + G+VFSWG G+L
Sbjct: 300 GWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQL 359
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACG 136
GH D P + LS +I+L G
Sbjct: 360 GHNEPKDTNAPVRLAELSMGSIKLEDLG 387
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 182/346 (52%), Gaps = 24/346 (6%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG-- 136
+ I CG ++ G V + GE S GRLG G D+ + I AL + +A
Sbjct: 3440 KQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTG 3499
Query: 137 -EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
E H+ A+T +G++++WGDG Y G LGHGN P+++ L G V ++CG H+
Sbjct: 3500 LEGHSLALTETGEVFSWGDGDY--GKLGHGNSERQRRPRQIEA-LRGEDVLHVACGHKHS 3556
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A+VT G+LFTFG G LG G+ + +P +V +L+ + ACG HT V
Sbjct: 3557 AIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVV----- 3611
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
++T+G+G+ G+LG G AK+ P V A + N ++ CG T+ALT
Sbjct: 3612 ------TTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALT 3665
Query: 316 TSGHVYTMG----SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
G VY+ G + ++ ++ AD P +V LS+ F+E+IA G H LT + +
Sbjct: 3666 KEGKVYSCGHNRCNGIF-EVDTQHAD-YYPQQVMA-LSEQFIEDIAAGYEHALALTKEGD 3722
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
V++WG +G+LG G T + P L+ +L+ K ++ I+ G N +AA
Sbjct: 3723 VWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAA 3768
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/320 (35%), Positives = 166/320 (51%), Gaps = 28/320 (8%)
Query: 106 GRLGHGVDSDVLHPKLIDALSNMNIE-LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLL 162
GRLG G S+ PKLI I+ LV+ + HT A+ G +Y+WGDG Y G L
Sbjct: 444 GRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDY--GKL 501
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
GHGN V+ PK + GP++G V I+ G H+A +TS G L+T+GDG +G LGHGD S
Sbjct: 502 GHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHS 561
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
SIP V+ + G+ +V +CG T + + + ++++G GD G+LGHG
Sbjct: 562 RSIPTLVKDITGVGSV--SCGSSFTVVISQ-----------DATTVWSFGAGDNGKLGHG 608
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS-PVYGQLGNPQADGKLP 341
D P ++ L +V C ++ALT+ G V+ GS P G G A +P
Sbjct: 609 DTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLG-YGQADATFLVP 667
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSL----V 397
R++ + + +IA G H LT +VY+WG A+G+ G G+ NSP L V
Sbjct: 668 KRLD-EFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNN---NSPVLLPRKV 723
Query: 398 EALKDKQVKSIACGTNFTAA 417
+ + I+ GT+ + A
Sbjct: 724 TGFDNHVIYQISVGTSHSIA 743
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 128/252 (50%), Gaps = 18/252 (7%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW-- 245
I CG T V+ G + G+G++G LG G+ + R + +L+G A
Sbjct: 3442 IHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATSTGLE 3501
Query: 246 -HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ A+ E +G++F+WGDGD G+LGHG+ E + P + AL + V
Sbjct: 3502 GHSLALTE------------TGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHV 3549
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
ACGH + +T G ++T G+ G+LG ++ KLP +V L VE IACG+ H
Sbjct: 3550 ACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHT 3608
Query: 364 AVLTSKTE-VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
V+T+ E V+T+G+G G+LG G T + +P V+A +K I CG FT A+
Sbjct: 3609 VVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEG 3668
Query: 423 WVSGVDQSMCSG 434
V + C+G
Sbjct: 3669 KVYSCGHNRCNG 3680
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 149/305 (48%), Gaps = 25/305 (8%)
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
AL+ VV ++ H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 3485 ALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGE 3544
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
++ VACG H+ VT+ G L+T+G + G LG GN + +P +V L+ I V I
Sbjct: 3545 DVLHVACGHKHSAIVTVDGKLFTFGAS--DLGRLGLGNTSNKKLPAQVTA-LQPIMVELI 3601
Query: 189 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+CG HT VVT+ + ++TFG+G +G LG G + P+ V++ L + CG T
Sbjct: 3602 ACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFT 3661
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGD-KGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
A+ + GK+++ G G + A P V AL E +A
Sbjct: 3662 LALTK------------EGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAA 3709
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ +ALT G V++ G+ GQLG PQ + L + ++GK + +I+ G H
Sbjct: 3710 GYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGK----GIRQISAGHNH 3765
Query: 363 VAVLT 367
A T
Sbjct: 3766 SAAWT 3770
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 145/331 (43%), Gaps = 47/331 (14%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K+ V+ WG S +LG +L P L + +N
Sbjct: 403 KESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFAN------------------------- 437
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDG 210
N+G LG G+ + PK + E + +S HT + S G+++++GDG
Sbjct: 438 -SEQGNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDG 496
Query: 211 TFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LGHG+ + P+ + ++G + A G H+AA+ S G L+
Sbjct: 497 DYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAIT------------SEGLLY 544
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVY 328
TWGDGD GRLGHGD ++ +PT V + V+CG S TV ++ V++ G+
Sbjct: 545 TWGDGDYGRLGHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQDATTVWSFGAGDN 602
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G+LG+ +V L + ++ C S LTS +V+ WG G LG+G
Sbjct: 603 GKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC--LGYGQA 660
Query: 389 DDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
D P ++ +D Q+ IA G N A+
Sbjct: 661 DATFLVPKRLDEFQDLQIIDIAVGDNHCLAL 691
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 35/291 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G G LG G + P+ +E+ DV ++ACG +H+A+V
Sbjct: 3511 GEVFSWGDGDY-GKLGHGNSE---------RQRRPRQIEALRGEDVLHVACGHKHSAIVT 3560
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD-LYT 151
G++F++G GRLG G S+ P + AL + +EL+ACG HT VT + ++T
Sbjct: 3561 VDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWT 3620
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG--- 208
+G+G Y G LG G + P+ V+ +++ I CG T +T G++++ G
Sbjct: 3621 FGEGEY--GQLGLGRTTAKMTPQYVDA-FSKLNIKKICCGARFTLALTKEGKVYSCGHNR 3677
Query: 209 -DGTFGV-LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G F V H D P++V +L A G H A+ + G
Sbjct: 3678 CNGIFEVDTQHADY----YPQQVMALSEQFIEDIAAGYEHALALTK------------EG 3721
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+++WG+ G+LG G + P +++L +++ GH+ + A T +
Sbjct: 3722 DVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAAWTVA 3772
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 143/304 (47%), Gaps = 39/304 (12%)
Query: 20 SSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAV 74
SS+GS DG L G ++ WG+G G LG G N V K + ++ V
Sbjct: 473 SSKGS---DGHTLAIASDGRIYSWGDGDY-GKLGHG-NHVTQ----KSPKLILGPMQGKV 523
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
V + IA G RH+A + +G +++WG+ GRLGHG + P L+ ++ + V+
Sbjct: 524 V---RQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITGVGS--VS 578
Query: 135 CGEYHTCAVTLSGDLYT-WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
CG T V +S D T W G + G LGHG+ + PK ++ L+G+ + + C
Sbjct: 579 CGSSFT--VVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISN-LQGLLIRKVCCASQ 635
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ+F +G G LG+G + +P+ ++ + L+ + A G H A+
Sbjct: 636 SSLALTSIGQVFVWGSGP--CLGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALT- 692
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK-LVPTCVAALVEPNFCRVACGHSLT 311
+++WG+ G+ G G+ + L+P V +++ G S +
Sbjct: 693 -----------CDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHS 741
Query: 312 VALT 315
+A T
Sbjct: 742 IAWT 745
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 115/271 (42%), Gaps = 54/271 (19%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
+E I V SI+ VTS Q + + + ++ + +EV SL R
Sbjct: 339 IESIGVESIAANGSENKSVTSTQQEYIYIEDA----------AIHLLQEVASL-----AR 383
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV-- 297
G++ + + + + + ++ WG +LG + E L+P +
Sbjct: 384 EHEGIFR-----DTVDSSLQTDHVKESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANS 438
Query: 298 -EPNFCRVACGHS----------------------------LTVALTTSGHVYTMGSPVY 328
+ N+ R+ G S T+A+ + G +Y+ G Y
Sbjct: 439 EQGNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDY 498
Query: 329 GQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G+LG+ K P + G + V +IA G H A +TS+ +YTWG G GRLGHGD
Sbjct: 499 GKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGD 558
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
R+ P+LV+ + V S++CG++FT I
Sbjct: 559 NHSRSIPTLVKDITG--VGSVSCGSSFTVVI 587
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 48/220 (21%)
Query: 37 IWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+W G GD G LG G +RV PK + + L ++ + C + + +
Sbjct: 594 VWSFGAGDNGKLGHGDTSRVYR----------PKVISNLQGLLIRKVCCASQSSLALTSI 643
Query: 95 GEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+VF WG SG LG+G D+ L PK +D ++ I +A G+ H A+T D+Y+WG
Sbjct: 644 GQVFVWG--SGPCLGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWG 701
Query: 154 DGTYNFGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGPWHTA----------VVTSA- 201
+ G G GN S +P++V G + + IS G H+ +VTS
Sbjct: 702 NNAS--GQCGLGNNNSPVLLPRKVTG-FDNHVIYQISVGTSHSIAWTALPTDRCIVTSYK 758
Query: 202 -----------GQLF-------TFGDGTFGVLGHGDRKSV 223
+L+ TF D V+ HG RK +
Sbjct: 759 PFCIDLKENTFSKLYHLLDRFCTFNDTASSVVTHGQRKQL 798
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 200/403 (49%), Gaps = 47/403 (11%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFI-WGEGTGDGVLGGGLNRVGSCFG 59
M ++ RV L SA G+ H G+V WG G DG LG G
Sbjct: 8 MSXVSAPVRRVLLISA------GASHSVALLXGNVVCSWGRGE-DGQLG---------HG 51
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ-GEVFSWGEESGGRLGHGVDSDVLH 118
D P L + +V ++ CG H ++ +V+SWG D+
Sbjct: 52 DAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWG------------CDLFT 99
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+ I AL + I+ +ACG+ H AVT+ G++ +WG G LG G VP+++
Sbjct: 100 PQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGRN--QNGQLGLGTTEDSLVPQKIQ- 156
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
+G+ V ++ G HTA VT G+L+ +G G +G LG GDR +P +V +++G++ V
Sbjct: 157 AFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMV 216
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
+ ACG HT +V SSG L+T+G G+LGHGD E L P + AL E
Sbjct: 217 KVACGWRHTISV------------SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE 264
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIA 357
++ G T+ALT+ G +Y G +GQ+G D P +V+ + V I+
Sbjct: 265 NLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVH-IS 323
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
CG H +T + V++WG+G NG+LGHG++ DRN P ++E L
Sbjct: 324 CGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 366
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 173/349 (49%), Gaps = 30/349 (8%)
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
SA V V I+ G H+ + V SWG G+LGHG D L P + AL +
Sbjct: 12 SAPVRRVLLISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVV 71
Query: 132 LVACGEYHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
V CG HT A + S +Y+WG + P+ + L G+ + I+C
Sbjct: 72 SVTCGADHTTAYSESFTQVYSWGCDLFT--------------PQPIK-ALHGLRIKQIAC 116
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H VT G++ ++G G LG G + +P+++++ +G+ A G HTAAV
Sbjct: 117 GDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 176
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G+L+ WG G G LG GD+ +LVP V+ + +VACG
Sbjct: 177 TE------------DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRH 224
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
T+++++SG +YT G YGQLG+ + L P+++E L ++ + EI+ G H LTS
Sbjct: 225 TISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSD 283
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++Y WG G++G GD D SP V+ +++V I+CG T A+
Sbjct: 284 GKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAV 332
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P ++ V +I+CG RH V ++ VFS
Sbjct: 281 TSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFS 340
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D PK+I+ LS
Sbjct: 341 WGRGTNGQLGHGESIDRNIPKMIEVLS 367
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/382 (33%), Positives = 195/382 (51%), Gaps = 22/382 (5%)
Query: 43 GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI--ACGGRHAALVNKQGEVFSW 100
G+ V GLN + ++ + +ES + + I A G + + +V+ G+VF+
Sbjct: 2923 GNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--CGEYHTCAVTLSGDLYTWGDGTYN 158
GE S GRLG G +++ P I +LS + VA C H AVT G +++WGDG Y
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQY- 3041
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LGHG+ S+ PK + + H+ +SCG H+A V+ G+LFT+G G G LGHG
Sbjct: 3042 -GQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHG 3099
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
D + + P+ V +L+ +R ACG N+ + L+ WGDG G+
Sbjct: 3100 DSNNQTKPKLVRALEKVRISCVACGS-----------RNAHTLAAGDNSLWAWGDGSFGK 3148
Query: 279 LGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD 337
LG D + VP V N ++ CG +V LT G VYT G Y +LGN
Sbjct: 3149 LGLKDGSSSTDVPVQVITF-PSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTS 3207
Query: 338 GK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSL 396
+ +P V+G SK+ + ++A G+ H LTS EVY+WG +G+ G+ T P +
Sbjct: 3208 VQPIPTLVDGLASKT-ITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQI 3266
Query: 397 VEALKDKQVKSIACGTNFTAAI 418
V +LK ++ IACG++ + A
Sbjct: 3267 VASLKGHRICKIACGSSHSIAF 3288
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 191/385 (49%), Gaps = 23/385 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G+ V G G N G G++ + P+ ES L+ I G + V G+V++
Sbjct: 3831 GSTFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYA 3890
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL----VACGEYHTCAVTLSGDLYTWGDG 155
G + GRLG G +V P + +L+ I + + G H AVT G+LY WG+G
Sbjct: 3891 SGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEG 3950
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LG G V+ VP + L+ HV CG H+A +T G L+T+G G +G L
Sbjct: 3951 --EDGKLGLGTTVNMNVPHLIES-LKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRL 4007
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS--SGKLFTWGD 273
GH D ++ P+ V +LKG + ACG + + C+ SG +F+WGD
Sbjct: 4008 GHNDHETQHKPKLVSALKGEQVTCVACG------------SGDAQTLCATASGCVFSWGD 4055
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G E VP + +L + ++ CG ++ALTT+GHVYT G Y +LG+
Sbjct: 4056 GDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGH 4115
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ + P RV G L+ V +I CGS H V T +V++WG G++G+ T +
Sbjct: 4116 GDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVS 4175
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P + + + +ACG+ + A
Sbjct: 4176 VPKRINITDNICIDHVACGSAHSIA 4200
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 159/320 (49%), Gaps = 20/320 (6%)
Query: 54 VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD 113
+GS V + L + + I GG+H V QGE+++WGE G+LG G
Sbjct: 3901 IGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTT 3960
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
++ P LI++L + ++ CG H+ +T G LYTWG G Y G LGH + + P
Sbjct: 3961 VNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRY--GRLGHNDHETQHKP 4018
Query: 174 KRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
K V+ L+G V+ ++CG T T++G +F++GDG +G LG G + +P++++S
Sbjct: 4019 KLVSA-LKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDS 4077
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
L G ++ CG + A+ ++G ++TWG GD RLGHGD + P
Sbjct: 4078 LTGKHVIKLLCGSQFSMALT------------TAGHVYTWGKGDYYRLGHGDDSHQRTPR 4125
Query: 292 CVAALV-EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLS 349
V L+ N + CG + T SG V++ G GQ+GN +P R+
Sbjct: 4126 RVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQAVSVPKRI-NITD 4184
Query: 350 KSFVEEIACGSYHVAVLTSK 369
++ +ACGS H +SK
Sbjct: 4185 NICIDHVACGSAHSIAWSSK 4204
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 128/409 (31%), Positives = 189/409 (46%), Gaps = 52/409 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA--CGGRHAAL 90
G VF GEG+ G LG +G ++M P + S + V+ +A C GRH
Sbjct: 2977 GKVFACGEGSS-GRLG-----IGGFANIRM----PHQISSLSMYVVRKVAVSCAGRHVLA 3026
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V G+VFSWG+ G+LGHG PK+I+ +I V+CG H+ AV+++G+L+
Sbjct: 3027 VTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELF 3086
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ--LFTFG 208
TWG G G LGHG+ + PK V LE + +S ++CG A +AG L+ +G
Sbjct: 3087 TWGQGAD--GRLGHGDSNNQTKPKLVRA-LEKVRISCVACGS-RNAHTLAAGDNSLWAWG 3142
Query: 209 DGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
DG+FG LG D S +P +V + ++ CG+ + + + GK
Sbjct: 3143 DGSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECGMHFSVLLTK------------EGK 3189
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG G+ RLG+ + +PT V L +VA G +ALT+SG VY+ G
Sbjct: 3190 VYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNE 3249
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH----------VAVLTSKTEVYTWGK 377
+GQ GN ++ L + +IACGS H AV S
Sbjct: 3250 HGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQGSLTTAVKFSPISFSNSKD 3309
Query: 378 GANGRLGHG-------DTDDRNSPSLVE---ALKDKQVKSIACGTNFTA 416
+ HG +T D+ PSL + +LK + A G TA
Sbjct: 3310 PLGASIVHGKSSDDAKETKDKERPSLTQIIISLKQHSKRQEALGHVLTA 3358
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 206/422 (48%), Gaps = 49/422 (11%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA-VVLDV--QNIACGGR 86
D L + +I E T DG + + + +G P ++++ ++L++ + +
Sbjct: 415 DRLAEPYICSEETIDGTVKRKASEIAH-WGSNRSEGGPSIIQTSNILLEIGAKEFYSSPK 473
Query: 87 HAALVNKQGEVF-----SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
H ++ G VF S G+ + +L D +++ ID + N H
Sbjct: 474 HRVVLTVHGTVFYVMDASMGDFTVEQLFFPGDEEIIQ---IDHNPSGN---------HIL 521
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+T G +Y+WG G+ G+LG GN S P V L G + IS G H+A VT
Sbjct: 522 ALTKDGKVYSWGQGSN--GVLGIGNTESQTAPTAV-AALSGDRIVHISAGSMHSAAVTED 578
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSS 259
G L+T+G G++G LGHG+ + IP VE L G++ V+ CG HT A+ +
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD------- 631
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHSLTVALTTSG 318
+G++++WGDGD G+LG + VP ++ + + ++ CG+ +++ALT G
Sbjct: 632 -----TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDG 686
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+Y+ G QLG+ Q + P +EG LS++ V +++ G+ H LT+ ++VY WGK
Sbjct: 687 KLYSWGCGDTYQLGHGNQEHVRQPKLIEG-LSETVVSDVSVGAQHCVALTTDSDVYAWGK 745
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRL 437
++ + D +SP ++EA K IACG + T +VS +G L
Sbjct: 746 NSSFEVNESG-DIISSPLMIEAASGKGALLIACGASET-------FVSFSKSPTPTGKEL 797
Query: 438 PF 439
PF
Sbjct: 798 PF 799
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 164 HGNEVSHW------------VPKRVNGPLEG-----IHVSSISCGPWHTAVVTSAGQLFT 206
HGN+V W +V P+E +H + G + VV+ G++F
Sbjct: 2922 HGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFA 2981
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
G+G+ G LG G ++ +P ++ SL +R V +C H AV +
Sbjct: 2982 CGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVT------------A 3029
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
GK+F+WGDG G+LGHG ++ P + + V+CG + A++ +G ++T G
Sbjct: 3030 DGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWG 3089
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS-KTEVYTWGKGANGRL 383
G+LG+ ++ + ++ L K + +ACGS + L + ++ WG G+ G+L
Sbjct: 3090 QGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKL 3149
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G D + + I CG +F+ +
Sbjct: 3150 GLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLL 3184
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 152/365 (41%), Gaps = 37/365 (10%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
M + + K+L++ + + IA +V K EVF E D +L
Sbjct: 3761 MAARMAKSLQNRTLAPAKFIADVNERIEMVRKSSEVFDREHEDHVMFRQEQDEQLL---- 3816
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGP 179
+ + + T + ++ WG + G LG GN+V R+
Sbjct: 3817 --------LWMQRYPKDWTLPTGSTFSVFGWGHN--HRGQLGGIEGNKVK---SPRLCES 3863
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK----GL 235
L ++ + I+ G VT G+++ G G LG G +V+ P + SL +
Sbjct: 3864 LSELNPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAV 3923
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
+ + G H AV + G+L+ WG+G+ G+LG G VP + +
Sbjct: 3924 KKIAIHSGGKHCLAVT------------TQGELYAWGEGEDGKLGLGTTVNMNVPHLIES 3971
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE 355
L + CG S + +T G +YT G YG+LG+ + + ++ L V
Sbjct: 3972 LKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTC 4031
Query: 356 IACGSYHVAVL--TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+ACGS L T+ V++WG G G+LG G + P +++L K V + CG+
Sbjct: 4032 VACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQ 4091
Query: 414 FTAAI 418
F+ A+
Sbjct: 4092 FSMAL 4096
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F +G G LG + V PR ESL L G AV +
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTD----------- 3884
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL----VEPNFCRVACGHSLTVALTTSGH 319
GK++ G GRLG G + PT + +L + + G +A+TT G
Sbjct: 3885 -DGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGE 3943
Query: 320 VYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+Y G G+LG + +P+ +E SK ++ CGS H A +T +YTWGKG
Sbjct: 3944 LYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDA-GCGSSHSACITDDGSLYTWGKG 4002
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
GRLGH D + ++ P LV ALK +QV +ACG+ +C
Sbjct: 4003 RYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLC 4043
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 16/251 (6%)
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSG 318
S++ K+F WG D +LG EAK+ P L + + A G + ++ G
Sbjct: 2918 STDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDG 2977
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIA--CGSYHVAVLTSKTEVYTW 375
V+ G G+LG A+ ++P+++ LS V ++A C HV +T+ +V++W
Sbjct: 2978 KVFACGEGSSGRLGIGGFANIRMPHQI-SSLSMYVVRKVAVSCAGRHVLAVTADGKVFSW 3036
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSM 431
G G G+LGHG + P ++E + K ++ ++CGT +AA+ L W G D +
Sbjct: 3037 GDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRL 3096
Query: 432 CSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKT 491
G N K K + C +C S+ + ++A N + D F KL
Sbjct: 3097 GHGDS--NNQTKPKLVRALEKVRISCVACGSRNA--HTLAAGDNSLWAWGDGSFGKLGL- 3151
Query: 492 FDTDGSSHSSV 502
DGSS + V
Sbjct: 3152 --KDGSSSTDV 3160
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 174/337 (51%), Gaps = 24/337 (7%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG-- 136
Q I CG +V G V + GE S GRLG G D+ I ++ + +A
Sbjct: 1834 QQIVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVG 1893
Query: 137 -EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
+ HT AVT SG++++WGDG Y G LGHGN P+++ L+G V +SCG H+
Sbjct: 1894 SDGHTLAVTESGEVFSWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQLSCGFKHS 1950
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
AVVT+ G+LFTFG+G +G LG G + +P V +L+ + ACG+ HT V
Sbjct: 1951 AVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCV----- 2005
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ ++ +GDGD G+LG G+ K +PT + AL +VACG +VAL+
Sbjct: 2006 ------SADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALS 2059
Query: 316 TSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
G V+T G +G P G P V LS F+E++ CG+ H VLTS +V
Sbjct: 2060 KYGKVFTWGQERL--IGQPDTRGGSNCQPQEV-ASLSGYFIEDVVCGAEHTLVLTSDGDV 2116
Query: 373 YTWGKGANGRLGHGDTDDR-NSPSLVEALKDKQVKSI 408
+ WG + G+LG G T+ P LV L K ++ +
Sbjct: 2117 WGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKNIRQV 2153
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 125/236 (52%), Gaps = 18/236 (7%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW-- 245
I CG T VV + G + G+G++G LG G+ + + S++G + A V
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSD 1895
Query: 246 -HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
HT AV E SG++F+WGDGD G+LGHG+ + + P + AL ++
Sbjct: 1896 GHTLAVTE------------SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQL 1943
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
+CG + +T G ++T G+ YG+LG + K+P RV L + +ACG H
Sbjct: 1944 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHT 2002
Query: 364 AVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+++ T V+ +G G G+LG G+T ++ P+ ++AL+ +K +ACGT F+ A+
Sbjct: 2003 LCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVAL 2058
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 195/376 (51%), Gaps = 18/376 (4%)
Query: 46 VLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
+LG G N G GV+ LP E+ L + G + V G+V++ G +
Sbjct: 583 ILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGA 642
Query: 105 GGRLGHGVDSDVLHPKLIDALSNMNIE--LVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 162
GGRLG G V P L+++L ++ I+ +V G H A++ G++Y+WG+G + G L
Sbjct: 643 GGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEG--DDGKL 700
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
GHGN+ S P RV L G V ++CG H+A +T++G+L+T+G G +G LGHGD
Sbjct: 701 GHGNKSSCERP-RVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDD 759
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
P++VE+L G R ACG + + +C +++WGDGD G+LG G
Sbjct: 760 QLRPKKVEALSGWRVRCVACGSGDAQTLC------VTDDDC----VWSWGDGDYGKLGRG 809
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLP 341
+ VP V L RV CG +VALT SG VYT G Y +LG+ D + P
Sbjct: 810 GSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRP 869
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
RV K + IA GS H T EVYTWG G+LG G + + P LV AL+
Sbjct: 870 KRVAALQGKKVIC-IAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQ 928
Query: 402 DKQVKSIACGTNFTAA 417
K++ ++CG+ T A
Sbjct: 929 GKKINRVSCGSAHTVA 944
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 155/308 (50%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
S P LES + ++ + GG+H ++ +GEV+SWGE G+LGHG S P++I
Sbjct: 655 SCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVI 714
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
++L + VACG H+ +T SG+LYTWG G Y G LGHG+ PK+V L G
Sbjct: 715 ESLRGKEVVDVACGGAHSACITASGELYTWGKGRY--GRLGHGDSDDQLRPKKVEA-LSG 771
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
V ++CG T VT ++++GDG +G LG G +P V+ L+G+ +R
Sbjct: 772 WRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRV 831
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ +SG ++TWG GD RLGHG + P VAAL
Sbjct: 832 ECGSQFSVALT------------ASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKK 879
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA T +G VYT G GQLG+ + R+ L + ++CGS
Sbjct: 880 VICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGS 939
Query: 361 YHVAVLTS 368
H ++
Sbjct: 940 AHTVAWST 947
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 154/288 (53%), Gaps = 27/288 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WGEG DG LG G K P+ +ES +V ++ACGG H+A
Sbjct: 685 AEGEVYSWGEGD-DGKLG---------HGNKSSCERPRVIESLRGKEVVDVACGGAHSAC 734
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGD 148
+ GE+++WG+ GRLGHG D L PK ++ALS + VAC G+ T VT
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDC 794
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++WGDG Y G LG G VP RV+ L+G+ V + CG + +T++G ++T+G
Sbjct: 795 VWSWGDGDY--GKLGRGGSDGCKVPLRVD-LLQGMGVIRVECGSQFSVALTASGSVYTWG 851
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G + LGHG V P+ V +L+G + + A G H A + +G++
Sbjct: 852 KGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTD------------TGEV 899
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+TWGD D+G+LG G A P VAAL RV+CG + TVA +T
Sbjct: 900 YTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWST 947
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 155/335 (46%), Gaps = 39/335 (11%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG + WG + G LG G +V +P L I V G VT+ G+
Sbjct: 580 SGTILGWGHN--HRGQLGGVEGAKVKLPMPCEALSALRPIQVVG---GEQTLFAVTADGK 634
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++ G G G LG G SVS P +ESL+ + ++ +V NS +C
Sbjct: 635 VYATGYGAGGRLGIGGTDSVSCPTLLESLQHV--------------FIKKVVVNSGGKHC 680
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+ G++++WG+GD G+LGHG+K + P + +L VACG + + +T SG
Sbjct: 681 LALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGE 740
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWG 376
+YT G YG+LG+ +D +L P +VE LS V +ACGS L T V++WG
Sbjct: 741 LYTWGKGRYGRLGHGDSDDQLRPKKVEA-LSGWRVRCVACGSGDAQTLCVTDDDCVWSWG 799
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMC 432
G G+LG G +D P V+ L+ V + CG+ F+ A+ ++ W G +
Sbjct: 800 DGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLG 859
Query: 433 SGCRLPFNNFKR------KRHNCYNCGLVFCHSCS 461
G KR K+ C G + C +C+
Sbjct: 860 HGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACT 894
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 120/259 (46%), Gaps = 29/259 (11%)
Query: 164 HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
H ++ HWV +R ++S G W +G + +G G LG + V
Sbjct: 558 HDEQLIHWVNRRPED-------WTLSWG-W-------SGTILGWGHNHRGQLGGVEGAKV 602
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+P E+L LR ++ G AV + GK++ G G GRLG G
Sbjct: 603 KLPMPCEALSALRPIQVVGGEQTLFAVT------------ADGKVYATGYGAGGRLGIGG 650
Query: 284 KEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 341
++ PT + +L +V G +AL+ G VY+ G G+LG+
Sbjct: 651 TDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCER 710
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
RV L V ++ACG H A +T+ E+YTWGKG GRLGHGD+DD+ P VEAL
Sbjct: 711 PRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALS 770
Query: 402 DKQVKSIACGTNFTAAICL 420
+V+ +ACG+ +C+
Sbjct: 771 GWRVRCVACGSGDAQTLCV 789
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 209/414 (50%), Gaps = 35/414 (8%)
Query: 16 AVSSSSQGSGHDDGDALGD----VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE 71
A S S S + D +L + V +WG + + GGL GS + SS+ L+
Sbjct: 3220 AEPSYSTSSNYADEPSLNELSSKVLVWGLNDKEQL--GGLK--GSKVKLPTYSSVLSQLK 3275
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
+IA G + +V++ G++++ GE + GRLG G +++V PK + LS ++
Sbjct: 3276 PI------HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVK 3329
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VA G H A+TL G +++WG+G G LGHGN ++ PK + L + I+
Sbjct: 3330 KVAVHSGGKHAMALTLDGKVFSWGEG--EDGKLGHGNRLTLEKPKLIE-TLRTKRIRDIA 3386
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG H+A +TS+G+L+T+G G +G LGHGD + P+ V +L R V+ ACG
Sbjct: 3387 CGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACG------ 3440
Query: 250 VVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
+ + C G +F+WGDGD G+LG G E +P V L ++ CG
Sbjct: 3441 ------SRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECG 3494
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
++ALT SG V+T G Y +LG+ + P ++G K + +A G+ H +
Sbjct: 3495 AQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCLAV 3553
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
T +VY WG +G+ G G+T PSLV L V +ACG++ + A L
Sbjct: 3554 TDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3607
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 201/400 (50%), Gaps = 28/400 (7%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSS---LPKALESAVVLDVQNIACGGRHAALVN 92
F WG + + G G N G G +D S +P E+ +L IA G + V
Sbjct: 4371 FSWGGAST--IFGWGHNHRGQLGG--LDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVT 4426
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++ G +GGRLG G V P L+++L ++ I+ VA G H A++ G+++
Sbjct: 4427 PDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVF 4486
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G G LGHGN S+ PK + L GI V I+CG H+A +TS G + T+G G
Sbjct: 4487 SWGEG--EDGKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLTWGKG 4543
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KL 268
+G LGHGD + P+ VE+L G R + ACG + + C + +
Sbjct: 4544 RYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNV 4591
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + VP + +L +V CG +VALT SG VYT G Y
Sbjct: 4592 WSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDY 4651
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V K + IA GS H + EV+TWG G+LG G
Sbjct: 4652 HRLGHGNTDHVRRPKKVAALQGKKII-SIATGSLHCVACSDGGEVFTWGDNDEGQLGDGT 4710
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV 427
P LV++L+ K + + CG+ T A+ ++ V
Sbjct: 4711 VSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4750
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 154/288 (53%), Gaps = 31/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALV 91
G+VF WGEG DG LG G NR DS PK +E+ + V +IACG H+A +
Sbjct: 4483 GEVFSWGEGE-DGKLGHG-NR---------DSYDRPKLIEALSGIGVIDIACGSAHSACI 4531
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDL 149
QG V +WG+ GRLGHG D L PKL++AL +AC G+ T +T ++
Sbjct: 4532 TSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNV 4591
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WGDG Y G LG G VP ++ L G+ V+ + CG + +T +G ++T+G
Sbjct: 4592 WSWGDGDY--GKLGRGGSDGCKVPMKIES-LAGLGVTKVECGSQFSVALTRSGSVYTWGK 4648
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKL 268
G + LGHG+ V P++V +L+G + + A G H A CS G++
Sbjct: 4649 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDGGEV 4695
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
FTWGD D+G+LG G A P V +L + +V CG + T+AL+T
Sbjct: 4696 FTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4743
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 140/277 (50%), Gaps = 20/277 (7%)
Query: 63 DSSLPKALESAVVLDVQNIA--CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D++ PK +E +++ +A C GRH + G+VFSWG GGRLGHG S P
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT 674
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK--RVNG 178
I AL+ + V CG ++ A+T +G+LYTWG GTY G LGHGN +P +V
Sbjct: 675 RIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTY--GRLGHGNSEDKHLPTIVQVLK 732
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
IHV ++ CG H+ VT G ++ +GDG FG LG+G S+P +E
Sbjct: 733 QQRVIHV-ALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIE-------- 783
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNC-SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
C + V+V G+ S G +++WG G GRLGHG E P + AL
Sbjct: 784 LPQC----SDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALE 839
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
N +A G + +ALT SG +Y G + QL P
Sbjct: 840 GKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPP 876
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 156/325 (48%), Gaps = 34/325 (10%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN--EVSHWVPKRVNGP 179
I+ + + + VAC E +T +G + + L H N PK + G
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLS----------LQHSNCHTPDTTAPKPIEG- 624
Query: 180 LEGIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
LE +++ ++ C H +T+ G +F++G+G G LGHGD S IP + +L +
Sbjct: 625 LESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQV 684
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
CG ++AA+ ++G+L+TWG G GRLGHG+ E K +PT V L
Sbjct: 685 TGVFCGSSYSAAIT------------AAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLK 732
Query: 298 EPNFCRVA--CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVE 354
+ VA CG + ++ +T +G VY G +G+LGN +G +P +E
Sbjct: 733 QQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAV 792
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG--- 411
++ GS+ L VY+WGKG GRLGHG ++ SP ++AL+ K + +A G
Sbjct: 793 KVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAH 852
Query: 412 -TNFTAAICLHKWVSGVDQSMCSGC 435
TA+ L+ W Q +C C
Sbjct: 853 CLALTASGELYGWGRNDFQQLCPPC 877
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 31/274 (11%)
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G N HG+ S + + P G+ V ++C ++T+ GQ+ +
Sbjct: 554 GTAANNVACFAHGS-TSRYSTATIELP-AGVQVRQVACSETSIYILTTTGQVLS------ 605
Query: 213 GVLGHGD--RKSVSIPREVESLKGLRTVRAA--CGVWHTAAVVEVMVGNSSSSNCSSGKL 268
L H + + P+ +E L+ + V+ A C H A+ ++G +
Sbjct: 606 --LQHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALT------------ATGDV 651
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F+WG+G+ GRLGHGD +K +PT + AL E V CG S + A+T +G +YT G Y
Sbjct: 652 FSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTY 711
Query: 329 GQLGNPQADGK-LPNRVEGKLSKSFVE-EIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
G+LG+ ++ K LP V+ + + + CG H +T VY WG G G+LG+G
Sbjct: 712 GRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNG 771
Query: 387 DTDDRNSPSLVEALK--DKQVKSIACGTNFTAAI 418
+ + P +E + D VK + G++F+ A+
Sbjct: 772 TCNGSSVPVAIELPQCSDGAVK-VFSGSHFSVAL 804
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSS---LPKALESAVVLDVQNIACGGRH 87
A GDVF WG G G G LG G D+S +P + + V + CG +
Sbjct: 647 ATGDVFSWGNGEG-GRLGHG------------DTSSKDIPTRIVALAERQVTGVFCGSSY 693
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--CGEYHTCAVTL 145
+A + GE+++WG + GRLGHG D P ++ L + VA CG+ H+ VT
Sbjct: 694 SAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTD 753
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
+G +Y WGDG +FG LG+G VP + P + G + + G ++
Sbjct: 754 TGIVYAWGDG--DFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVY 811
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
++G G G LGHG + + P+ +++L+G V A G+ H A+ +S
Sbjct: 812 SWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALT------------AS 859
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVA--------ALVEPNFCRVACGHSLTVALTTS 317
G+L+ WG D +L P CV L P R+A +
Sbjct: 860 GELYGWGRNDF---------QQLCPPCVTRDPIVLLPILTTPPTLRIAGMAAGGAQSIVW 910
Query: 318 GHVYTMGSPV 327
H T+G PV
Sbjct: 911 CHSSTLGIPV 920
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
IA GS + +++ ++Y G+G NGRLG G ++ +P V L VK +A +
Sbjct: 3279 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3338
Query: 416 AAICL------HKWVSGVDQSMCSGCRLPF------NNFKRKRHNCYNCG 453
A+ L W G D + G RL + KR CG
Sbjct: 3339 HAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACG 3388
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 201/388 (51%), Gaps = 29/388 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF WG D ++G G K+ LP ++ L I G + V +
Sbjct: 3465 NVFCWGLNDKD--------QLGGPKGSKI--KLPTLNDNLSALRCVQIVGGSKSLFCVTQ 3514
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
+G+V++ GE + GRLG G+ + + P+ I +LS I+ VA G H+ A+T G ++
Sbjct: 3515 EGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVF 3574
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G + G LGH + + P+ + L+ V I+CG H+A +TS G L+T+G G
Sbjct: 3575 SWGEG--DDGKLGHFSRWNCDKPRLIEA-LKSKRVRDIACGSSHSAAITSNGDLYTWGLG 3631
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGHGD + P++V++L R V+ ACG + + GK+++
Sbjct: 3632 EYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTL----------ALTDEGKVYS 3681
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G E VP V L + C++ CG ++ALT SG V+T G Y +
Sbjct: 3682 WGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFR 3741
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ A + P VEG K V +A G+ H +T +V+ WG +G+ G+G T
Sbjct: 3742 LGHGTDAHVRKPQIVEGLKGKKIV-HVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTT 3800
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P+LV L+ ++ +ACG++ + A
Sbjct: 3801 VNRKPALV-VLEGYKISKVACGSSHSIA 3827
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 211/430 (49%), Gaps = 26/430 (6%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
WG G+G + G G N G GV P + E+ V + G + V +G+
Sbjct: 4457 WG-GSGQ-IWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGK 4514
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGD 154
VF+ G +GGRLG G V HP ++++ ++ I+ +A G H A++ G++Y+WG+
Sbjct: 4515 VFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGE 4574
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHGN P RV L G V I+ G H+A +T+ G+L+T+G G +G
Sbjct: 4575 G--EDGKLGHGNRSPCDRP-RVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGR 4631
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWG 272
LGHGD + P+ VE+LK R V ACG + + C +++WG
Sbjct: 4632 LGHGDSEDQPRPKLVEALKSYRVVDMACG------------SGDAQTLCITDDDNVWSWG 4679
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + VP + L +V CG +VALT SG VYT G Y +LG
Sbjct: 4680 DGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLG 4739
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ D + P +V +K + ++ACGS H T EV++WG G+LG G T+
Sbjct: 4740 HGSDDHVRRPRKVSALQNKKVI-DVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAI 4798
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYN 451
P LV +L K++ +ACG+ + A +K VS + S + +N+ +
Sbjct: 4799 QRPRLVASLLGKKINRVACGSAHSLAWSTNKAVSA--GKLPSDIPMEYNHLQNIPITALR 4856
Query: 452 CGLVFCHSCS 461
L+ H S
Sbjct: 4857 NRLILLHHFS 4866
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/369 (31%), Positives = 183/369 (49%), Gaps = 42/369 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ IAC R +++K G+V+ S L P L + E++
Sbjct: 577 VQQIACSERCCLILSKAGKVYMLYYTS------------LSPTLQQLNGFGDREVIRIAS 624
Query: 138 Y----HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+ H +T G++++WG+G + G LGHG+ +H P + G L G V+ I CG
Sbjct: 625 HPDGKHYMGLTSDGEVFSWGNG--DGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSS 681
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVV 251
++ +TS G+++++G G FG LGHG + + P ++ KG R V ACG T AV
Sbjct: 682 YSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVT 741
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ SG +++WGDGD G+LG G + P + L+ + RV CG+ +
Sbjct: 742 D------------SGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFS 789
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
+ALT SG VYT G +LG+ D + P ++E LS V++IA GS H +T
Sbjct: 790 MALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDG 848
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
E+Y WG+ G+LG+ + P+L+ ++ K + +ACG T A W SG
Sbjct: 849 ELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA-----WTSGGQWI 903
Query: 431 MCSGCRLPF 439
+ S R+PF
Sbjct: 904 VSS--RVPF 910
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 176/348 (50%), Gaps = 32/348 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G V+ GE T +G LG G+ G+ S+P+ + S ++ +A GGRH+
Sbjct: 3516 GKVYACGEAT-NGRLGLGIT-TGTV-------SVPRQITSLSQYVIKKVAVHSGGRHSLA 3566
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL + + +ACG H+ A+T +GDLY
Sbjct: 3567 LTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLY 3626
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ + PK+V L V ++CG T +T G+++++G
Sbjct: 3627 TWGLGEY--GRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEGKVYSWG 3683
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + ++P EV+ L+ + + CG + A+ + SG++
Sbjct: 3684 DGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTK------------SGQV 3731
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG P V L VA G +A+T SG V+ G +
Sbjct: 3732 WTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDH 3791
Query: 329 GQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
GQ GN + P V L + ++ACGS H +A T+ V T
Sbjct: 3792 GQQGNGTTTVNRKPALV--VLEGYKISKVACGSSHSIAWATTDMSVPT 3837
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 157/292 (53%), Gaps = 27/292 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WGEG DG LG G NR C P+ ++S +V +IA GG H+A
Sbjct: 4565 AEGEVYSWGEGE-DGKLGHG-NR-SPC-------DRPRVIDSLRGKEVVDIAAGGAHSAC 4614
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGD 148
+ GE+++WG+ GRLGHG D PKL++AL + + +AC G+ T +T +
Sbjct: 4615 ITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDN 4674
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++WGDG Y G LG G VP ++ L+G V + CG + +T +G ++T+G
Sbjct: 4675 VWSWGDGDY--GKLGRGGSDGCKVPMKIE-TLQGQGVMKVECGSQFSVALTKSGSVYTWG 4731
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G + LGHG V PR+V +L+ + + ACG H A + +G++
Sbjct: 4732 KGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTD------------TGEV 4779
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
F+WGD D+G+LG G A P VA+L+ RVACG + ++A +T+ V
Sbjct: 4780 FSWGDNDEGQLGDGTTNAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 167/332 (50%), Gaps = 24/332 (7%)
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
Q VF WG +LG S + P L D LS + + G VT G +Y G
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACG 3522
Query: 154 DGTYNFGLLGHG---NEVSHWVPKRVNGPLEG-IHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ T G LG G VS VP+++ + I ++ G H+ +T+ G++F++G+
Sbjct: 3523 EATN--GRLGLGITTGTVS--VPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGE 3578
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGH R + PR +E+LK R ACG H+AA+ S+G L+
Sbjct: 3579 GDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAIT------------SNGDLY 3626
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHGD +L P V AL +VACG + T+ALT G VY+ G
Sbjct: 3627 TWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGD 3686
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+G+LG ++G +P+ V+ +L V +I CG+ LT +V+TWGKG RLGHG
Sbjct: 3687 FGKLGRGGSEGCNVPHEVD-RLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHG 3745
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +VE LK K++ +A G A+
Sbjct: 3746 TDAHVRKPQIVEGLKGKKIVHVAVGALHCLAV 3777
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 131/289 (45%), Gaps = 27/289 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG G G G LG G + P + V I CG ++ +
Sbjct: 638 GEVFSWGNGDG-GKLG---------HGDYQNHEEPALITGLSGKQVAKICCGSSYSVALT 687
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
GEV+SWG+ + GRLGHG D P L+ I VAC G+ T AVT SG +Y
Sbjct: 688 SNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVY 747
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G PK + L G V + CG + +T +G ++T+G G
Sbjct: 748 SWGDGDY--GKLGRGGNDGCKTPKVIE-KLMGQDVVRVYCGNQFSMALTKSGAVYTWGKG 804
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LGHG P+++E+L + A G H A+ E G+L+
Sbjct: 805 DNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE------------DGELYG 852
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
WG ++G+LG+ PT + + N VACG + T A T+ G
Sbjct: 853 WGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 33/271 (12%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F +G LG + +P ++L LR V+ +VG S S C
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQ--------------IVGGSKSLFC 3511
Query: 264 --SSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GK++ G+ GRLG G + VP + +L + +VA G ++ALTT G
Sbjct: 3512 VTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDG 3571
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
V++ G G+LG+ + + P +E SK V +IACGS H A +TS ++YTWG
Sbjct: 3572 KVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKR-VRDIACGSSHSAAITSNGDLYTWGL 3630
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL------HKWVSG----V 427
G GRLGHGD + P V+AL ++V +ACG+ + L + W G +
Sbjct: 3631 GEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKL 3690
Query: 428 DQSMCSGCRLP--FNNFKRKRHNCYNCGLVF 456
+ GC +P + + ++ CG F
Sbjct: 3691 GRGGSEGCNVPHEVDRLRDQKVCQIECGAQF 3721
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 172/333 (51%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG G N V +P L VV V + GG+HA +
Sbjct: 2959 GKLYACGEGT-NGRLGLGHNN-----NVPTPRQVP-ILNQYVVKKVA-VHSGGKHAMALT 3010
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG + PKL+++L I +ACG H+ A+T SG+LYTW
Sbjct: 3011 LDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTW 3070
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L+G V ++CG T +T G +F++GDG
Sbjct: 3071 GLGEY--GRLGHGDNCTQLKPKLVTA-LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3127
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + S+P +VE L G+ V+ CG + A+ ++ G+++T
Sbjct: 3128 DFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKI------------GEVWT 3175
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + PT + L VA G +A+T SG V+ G +GQ
Sbjct: 3176 WGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQ 3235
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K PN V G L FV +ACGS H
Sbjct: 3236 QGSGNTVVNKKPNLVLG-LDGVFVNRVACGSSH 3267
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 206/408 (50%), Gaps = 31/408 (7%)
Query: 18 SSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD 77
+SS+ + V +WG + + GGL GS + SS+ L+
Sbjct: 2892 TSSNYADEQSSNEISSKVLVWGLNDKEQL--GGLK--GSKVKLPTYSSVLSQLKPI---- 2943
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
+I+ G + +V++ G++++ GE + GRLG G +++V P+ + L+ ++ VA
Sbjct: 2944 --HISGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHS 3001
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G H A+TL G +++WG+G G LGHGN V+ PK + L + I+CG H+
Sbjct: 3002 GGKHAMALTLDGKVFSWGEG--EDGKLGHGNRVTLEKPKLLES-LRTKRIRDIACGSSHS 3058
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A +TS+G+L+T+G G +G LGHGD + P+ V +L+G R V+ ACG
Sbjct: 3059 AAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACG------------ 3106
Query: 256 GNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+ + C G +F+WGDGD G+LG G E VP V L ++ CG ++A
Sbjct: 3107 SRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLA 3166
Query: 314 LTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LT G V+T G Y +LG+ + P ++G K + +A G+ H +T +V
Sbjct: 3167 LTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCLAVTDSGQV 3225
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ WG +G+ G G+T P+LV L V +ACG++ + A L
Sbjct: 3226 FAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSL 3273
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 169/368 (45%), Gaps = 54/368 (14%)
Query: 97 VFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+F WG G+LG G+D S + P +ALS + +A GE AVT G LY G G
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTFG 213
+G + VS P V L+ + + ++ G H ++S G++F++G+G G
Sbjct: 4005 AGGRLGIGGTDSVS--TPTLVES-LQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDG 4061
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R S P+ +E+L G+ V ACG H+A + S G + TWG
Sbjct: 4062 KLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACIT------------SQGHVLTWGK 4109
Query: 274 GDKGRLGHGDKEAKLVPT-CV---------------AALVEP-----------------N 300
G GRLGHGD E +L P CV A+L E
Sbjct: 4110 GRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLG 4169
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACG 359
+V CG +VALT SG VYT G Y +LG+ D + P +V K + IA G
Sbjct: 4170 VIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKII-SIATG 4228
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
S H + EV+TWG G+LG G P LV++L+ K + + CG+ T A+
Sbjct: 4229 SLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288
Query: 420 LHKWVSGV 427
++ V
Sbjct: 4289 TYQLSEAV 4296
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 160/322 (49%), Gaps = 42/322 (13%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I+ ++ + VAC E VT SG LY+ H + PK V G LE
Sbjct: 528 IELPPSLQVRQVACTENSIYIVTTSGQLYSI-----------HSSCAETVAPKLVEG-LE 575
Query: 182 GIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
G+ V I+ C H ++SAG+++++G G G LGHGD S +P ++ K + +
Sbjct: 576 GVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIY 635
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A G ++AAV V G+LFTWG G GRLGHG+ + K VPT V AL
Sbjct: 636 A--GASYSAAVSSV------------GELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAY 681
Query: 300 NFCRVACG----HSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVE 354
VA G HS+ A+T G ++ G +G+LGN +G LP ++EG S V
Sbjct: 682 KVVDVALGSGDAHSM--AVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV---SSVA 736
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
I GS L+ +Y+WGKG GRLGHG+++ N P LV AL+ K++ +A G+
Sbjct: 737 RIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAH 796
Query: 415 TAAIC----LHKWVSGVDQSMC 432
A+ L+ W Q +C
Sbjct: 797 CLALTSSGELYGWGRNDYQQIC 818
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 144/306 (47%), Gaps = 36/306 (11%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
S P +ES + ++ +A GG+H ++ GEVFSWGE G+LGHG PKLI
Sbjct: 4018 STPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLI 4077
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ALS + + +ACG H+ +T G + TWG G Y G LGHG+ PKR
Sbjct: 4078 EALSGIGVVDIACGSAHSACITSQGHVLTWGKGRY--GRLGHGDSEDQLQPKRC------ 4129
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ ++I CG TA++ S + G + P ++ESL GL ++ C
Sbjct: 4130 VLRTTIMCGVGVTAIMASLAEEVPMGARS--------------PMKIESLAGLGVIKVEC 4175
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G + A+ SG ++TWG GD RLGHG+ + P VAAL
Sbjct: 4176 GSQFSVALTR------------SGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKII 4223
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+A G VA + SG V+T G GQLG+ R+ L + ++ CGS H
Sbjct: 4224 SIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAH 4283
Query: 363 VAVLTS 368
L++
Sbjct: 4284 TLALST 4289
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 137/270 (50%), Gaps = 25/270 (9%)
Query: 67 PKALESAVVLDVQNIA--CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
PK +E + V IA C GRHA ++ GEV+SWG GGRLGHG + P I A
Sbjct: 568 PKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKI-A 626
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L + + G ++ AV+ G+L+TWG GTY G LGHGN +VP +V L+
Sbjct: 627 LEK-QVTAIYAGASYSAAVSSVGELFTWGRGTY--GRLGHGNSDDKFVPTQVQA-LKAYK 682
Query: 185 VSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
V ++ G H+ VT G LF +GDG FG LG+G +P ++E +
Sbjct: 683 VVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV---------- 732
Query: 243 GVWHTAAVVEVMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
++V + G+ S S G L++WG G GRLGHG+ E VP V AL
Sbjct: 733 -----SSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKI 787
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
VA G + +ALT+SG +Y G Y Q+
Sbjct: 788 VDVAVGSAHCLALTSSGELYGWGRNDYQQI 817
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 37/252 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD--VQNIACGGRHAAL 90
G+V+ WG G G G LG G + K + + + L+ V I G ++A
Sbjct: 598 GEVYSWGAGEG-GRLGHG-------------DTASKEVPTKIALEKQVTAIYAGASYSAA 643
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGD 148
V+ GE+F+WG + GRLGHG D P + AL + VA G+ H+ AVT G
Sbjct: 644 VSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGL 703
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLFTF 207
L+ WGDG +FG LG+G+ +P ++ EG+ V+ I G + ++ G L+++
Sbjct: 704 LFAWGDG--DFGKLGNGSCNGSPLPVQI----EGVSSVARIYSGSQFSVALSYDGTLYSW 757
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G G G LGHG+ + ++P+ V +L+G + V A G H A+ SSG+
Sbjct: 758 GKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALT------------SSGE 805
Query: 268 LFTWGDGDKGRL 279
L+ WG D ++
Sbjct: 806 LYGWGRNDYQQI 817
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 105/220 (47%), Gaps = 19/220 (8%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A +F +G G LG D + +P E+L LR ++ A G AV
Sbjct: 3943 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVT--------- 3993
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKL+ G G GRLG G ++ PT V +L +VA G +AL++ G
Sbjct: 3994 ---PDGKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDG 4050
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ D ++ LS V +IACGS H A +TS+ V TWGKG
Sbjct: 4051 EVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKG 4110
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GRLGHGD++D+ P L+ +I CG TA +
Sbjct: 4111 RYGRLGHGDSEDQLQPKRC-VLR----TTIMCGVGVTAIM 4145
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 10 RVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP- 67
+++L V++ G+ + ++G++F WG GT G LG G + D +P
Sbjct: 624 KIALEKQVTAIYAGASYSAAVSSVGELFTWGRGTY-GRLGHGNSD---------DKFVPT 673
Query: 68 --KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+AL++ V+DV + G H+ V G +F+WG+ G+LG+G + P I+ +
Sbjct: 674 QVQALKAYKVVDVA-LGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGV 732
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
S ++ + G + A++ G LY+WG G + G LGHGN VPK V+ LEG +
Sbjct: 733 S--SVARIYSGSQFSVALSYDGTLYSWGKG--HGGRLGHGNSEHSNVPKLVHA-LEGKKI 787
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G H +TS+G+L+ +G +
Sbjct: 788 VDVAVGSAHCLALTSSGELYGWGRNDY 814
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ A+ A++V + S + DG G +F WG+G G LG G SC G
Sbjct: 674 QVQALKAYKVVDVALGSGDAHSMAVTDG---GLLFAWGDGDF-GKLGNG-----SCNG-- 722
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
S LP +E V V I G + + ++ G ++SWG+ GGRLGHG PKL
Sbjct: 723 --SPLPVQIEG--VSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKL 778
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN 158
+ AL I VA G H A+T SG+LY WG Y
Sbjct: 779 VHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQ 815
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/432 (33%), Positives = 211/432 (48%), Gaps = 30/432 (6%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
WG G+G + G G N G GV+ LP + E+ + + G + + G+
Sbjct: 3932 WG-GSGQ-IWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGK 3989
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGD 154
V + G +GGRLG G V P LI+++ ++ I VA G H A++ G++Y+WG+
Sbjct: 3990 VCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGE 4049
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHGN P+ + L G V I+ G H+A +TS G+L+++G G +G
Sbjct: 4050 G--EDGKLGHGNRSPCDRPRAIES-LRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGR 4106
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWG 272
LGHGD + + P+ V++LKG R ACG + + C +++WG
Sbjct: 4107 LGHGDSEDQTKPKLVDALKGYRVTDVACG------------SGDAQTLCITDDDSVWSWG 4154
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + VP + AL +V CG +VALT SG VYT G Y +LG
Sbjct: 4155 DGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLG 4214
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ D + P R K V IACGS H T EVYTWG G+LG G T+
Sbjct: 4215 HGTEDHIRRPRRCTTLQGKKIVS-IACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAI 4273
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG------VDQSMCSGCRLPFNNFKRK 445
P LV AL+ K++ +ACG+ + A +K V+ + S LP N + +
Sbjct: 4274 QRPRLVAALQGKKINRVACGSAHSLAWSTNKPVNAGKLPAQIPMEYNSLQSLPINVLRNR 4333
Query: 446 RHNCYNCGLVFC 457
++ +FC
Sbjct: 4334 LVLLHHISDLFC 4345
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/394 (31%), Positives = 199/394 (50%), Gaps = 28/394 (7%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D VF+WG D ++G G K+ + P E+ L I G +
Sbjct: 2911 DIQTQVFVWGLNDKD--------QLGGPKGSKIKT--PGINETLSTLKCVQIVGGSKSLF 2960
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLS 146
V + G++F+ GE + GRLG G+ + +V P+ + +LS I+ VA G H A+T+
Sbjct: 2961 CVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVD 3020
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G +++WG+G + G LGH + ++ P+ + L V I+CG H+A + S G L+T
Sbjct: 3021 GKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LRSKRVRDIACGGSHSAAIISNGDLYT 3077
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G G +G LGHGD + P+ V++L+G R ++ A G + + SG
Sbjct: 3078 WGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTL----------ALTDSG 3127
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+++WGDGD G+LG G E VP + L C++ CG ++ALT SG V+T G
Sbjct: 3128 TVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKG 3187
Query: 327 VYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
Y +LG+ A + P VE L V +A G+ H + +VY WG +G+ G+
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVE-TLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGN 3246
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
T P+LV+ L+ ++ +ACG++ + A C
Sbjct: 3247 STTTVNRKPALVQGLEGCKISRVACGSSHSIAWC 3280
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WGEG DG LG G NR C P+A+ES +V +IA GG H+A
Sbjct: 4040 AEGEVYSWGEGE-DGKLGHG-NR-SPC-------DRPRAIESLRGKEVVDIAAGGAHSAC 4089
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGD 148
+ GE++SWG+ GRLGHG D PKL+DAL + VAC G+ T +T
Sbjct: 4090 ITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDS 4149
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+++WGDG Y G LG G VP +++ L+G+ V + CG + +T +G ++T+G
Sbjct: 4150 VWSWGDGDY--GKLGRGGSDGCKVPMKIDA-LQGLGVIKVECGSQFSVALTKSGAVYTWG 4206
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G + LGHG + PR +L+G + V ACG H A + +G++
Sbjct: 4207 KGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTD------------AGEV 4254
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWGD D+G+LG G A P VAAL RVACG + ++A +T+
Sbjct: 4255 YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTN----------- 4303
Query: 329 GQLGNPQADGKLPNRV 344
P GKLP ++
Sbjct: 4304 ----KPVNAGKLPAQI 4315
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 147/286 (51%), Gaps = 27/286 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WGEG DG LG +M+ P+ +E+ V++IACGG H+A +
Sbjct: 3021 GKVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAII 3070
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG GRLGHG ++ L PKL+ AL + VA G + T A+T SG +Y
Sbjct: 3071 SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVY 3130
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G VP + L G+ V I CG + +T +GQ++T+G G
Sbjct: 3131 SWGDG--DFGKLGRGGSEGCSVPHPIER-LNGVGVCQIECGAQFSLALTKSGQVWTWGKG 3187
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V P+ VE+LKG + A G H +V++ +G+++
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLD------------NGQVYA 3235
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
WGD D G+ G+ P V L RVACG S ++A T
Sbjct: 3236 WGDNDHGQQGNSTTTVNRKPALVQGLEGCKISRVACGSSHSIAWCT 3281
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 171/348 (49%), Gaps = 43/348 (12%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
+ + CG + + + Q +VF WG +LG S + P + + LS + + G
Sbjct: 2901 KKVKCG---SGVKDIQTQVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQIVGGSK 2957
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVS 186
VT G L+ G+ T G LG G +S +V K+V
Sbjct: 2958 SLFCVTQDGKLFACGEATN--GRLGLGISAGNVPQPRQLTSLSQYVIKKV---------- 3005
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++ G H +T G++F++G+G G LGH R + PR +E+L+ R ACG H
Sbjct: 3006 AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSH 3065
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+AA++ S+G L+TWG G+ GRLGHGD +L P V AL +VA
Sbjct: 3066 SAAII------------SNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVAL 3113
Query: 307 G--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHV 363
G + T+ALT SG VY+ G +G+LG ++G +P+ +E +L+ V +I CG+
Sbjct: 3114 GSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIE-RLNGVGVCQIECGAQFS 3172
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
LT +V+TWGKG RLGHG P LVE LK K+V +A G
Sbjct: 3173 LALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVG 3220
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 180/366 (49%), Gaps = 32/366 (8%)
Query: 55 GSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS 114
+C LP L+ D+ +AC ++ + G V+ ++ + +
Sbjct: 418 ATCHNTPTTIPLPNDLD-----DIIQVACSSNSLLILLRTGRVY--------KMTNSAEP 464
Query: 115 DVLHPKLIDALSNMNI-ELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
+H I L+++ I +L A E H A+T GD+Y+WG+G +FG LGHG+ V+
Sbjct: 465 QSMHE--ISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNG--DFGKLGHGDTVTCDS 520
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P +N L G V +++CG H+A +T++G+LFT+G G+FG LG G + + P V L
Sbjct: 521 PMLIN-ELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGL 579
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
G+ V ACG + + +G +++WGDG+ G+LG G E P
Sbjct: 580 LGVTVVDVACGSGDAQTI----------ALADTGSVYSWGDGEYGKLGRGGSEGCKAPKL 629
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKS 351
V L + RV CG + A+ +G V+T G+ +LG+ + + P +VE L+
Sbjct: 630 VDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVE-TLAGK 688
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
V ++ GS+H T + E+ +WG+ G+LG G T + P+ +L K + I C
Sbjct: 689 HVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCS 748
Query: 412 TNFTAA 417
+ T A
Sbjct: 749 SAQTFA 754
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 167/340 (49%), Gaps = 32/340 (9%)
Query: 51 LNRVGSCFGVKMDSSLPKAL-ESAVVLDVQNIACG----GRHAALVNKQGEVFSWGEESG 105
L R G + + +S+ P+++ E + + D++ I G H + +G+V+SWG
Sbjct: 449 LLRTGRVYKMT-NSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDF 507
Query: 106 GRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG 165
G+LGHG P LI+ L ++ VACG +H+ A+T SG+L+TWG G+ FG LG G
Sbjct: 508 GKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGS--FGRLGLG 565
Query: 166 NEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
+ P V+G L G+ V ++CG T + G ++++GDG +G LG G +
Sbjct: 566 STEDILTPALVSGLL-GVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGC 624
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
P+ V+ L+GL R CG ++AAV C +G +FTWG+G+ +LGHG
Sbjct: 625 KAPKLVDKLQGLDVTRVYCGPQYSAAV------------CKNGAVFTWGNGEGYKLGHGT 672
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
+E P V L + ++ G +A T G + + G GQLG +G +
Sbjct: 673 EEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLG----EGHTGLK 728
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
E + S + G + + S + + W + + G +
Sbjct: 729 AEPAFAASLL-----GKCIIGITCSSAQTFAWSRPSRGTM 763
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 247 TAAVVEV--MVGNSSSSNC----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
T A +E+ + +S S+C S G +++WG+GD G+LGHGD P + L +
Sbjct: 472 TLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKS 531
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACG 359
VACG + A+T SG ++T G +G+LG + L P V G L + V+ +ACG
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVD-VACG 590
Query: 360 S--YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
S L VY+WG G G+LG G ++ +P LV+ L+ V + CG ++AA
Sbjct: 591 SGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAA 650
Query: 418 IC 419
+C
Sbjct: 651 VC 652
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 120/269 (44%), Gaps = 28/269 (10%)
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
NF L NE +R + + + CG + V Q+F +G LG
Sbjct: 2877 NFIFLASDNEEEEAEGQRASQ----VMAKKVKCG---SGVKDIQTQVFVWGLNDKDQLGG 2929
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS--GKLFTWGDGD 275
+ P E+L L+ V+ +VG S S C + GKLF G+
Sbjct: 2930 PKGSKIKTPGINETLSTLKCVQ--------------IVGGSKSLFCVTQDGKLFACGEAT 2975
Query: 276 KGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLG 332
GRLG G + P + +L + +VA G +ALT G V++ G G+LG
Sbjct: 2976 NGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLG 3035
Query: 333 N-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + P +E SK V +IACG H A + S ++YTWG G GRLGHGD +
Sbjct: 3036 HFSRMNCDKPRLIEALRSKR-VRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQ 3094
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICL 420
P LV+AL+ ++V +A G+ + L
Sbjct: 3095 LRPKLVKALEGQRVIQVALGSRDAQTLAL 3123
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 23 GSGHDDGDALGD---VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
GSG AL D V+ WG+G G L R GS G K PK ++ LDV
Sbjct: 590 GSGDAQTIALADTGSVYSWGDGEY-----GKLGRGGS-EGCKA----PKLVDKLQGLDVT 639
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+ CG +++A V K G VF+WG G +LGHG + V P+ ++ L+ ++ ++ G +H
Sbjct: 640 RVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHH 699
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGN 166
A T G+L +WG + G LG G+
Sbjct: 700 CLATTEEGELLSWGRN--DKGQLGEGH 724
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQA----DGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ALT+ G VY+ G+ +G+LG+ L N + GK V +ACGS+H A +T
Sbjct: 491 LALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGK----SVVNVACGSHHSAAIT 546
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ E++TWG+G+ GRLG G T+D +P+LV L V +ACG+ I L
Sbjct: 547 ASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIAL 599
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 24/171 (14%)
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN----FCRVACGHS 309
M + C + +LF WG L D PT + PN +VAC +
Sbjct: 393 MPAQEAHKVCGAQELFAWG-----WLSTSDATCHNTPTTIPL---PNDLDDIIQVACSSN 444
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLT 367
+ L +G VY M + PQ+ ++ + ++ K +A S H LT
Sbjct: 445 SLLILLRTGRVYKMTNS-----AEPQSMHEISTLADIEIIK-----LAAHSEGSHCLALT 494
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S+ +VY+WG G G+LGHGDT +SP L+ L K V ++ACG++ +AAI
Sbjct: 495 SEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAI 545
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 198/402 (49%), Gaps = 45/402 (11%)
Query: 28 DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
D D V +WG + + GGL G K+ +P ++ L +IA G +
Sbjct: 3069 DQDLPCTVMVWGLNDKEQL--GGLK------GSKV--KVPTFSQTISRLRPIHIAGGSKS 3118
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTL 145
+V+++G VF+ GE + GRLG GV +V P + L ++ VA G H A+TL
Sbjct: 3119 LFIVSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL 3178
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G +++WG+G G LGHGN + P++V L + ++CG H+A ++S G+L+
Sbjct: 3179 DGKVFSWGEG--EDGKLGHGNRTTLDKPRQVEA-LRAKKIRDVACGSSHSAAISSQGELY 3235
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNC 263
T+G G +G LGHGD + P+ V +L G R V+ ACG T A+ E
Sbjct: 3236 TWGLGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTE----------- 3284
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G +F+WGDGD G+LG G E P + L ++ CG ++ALT +G V+T
Sbjct: 3285 -DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTW 3343
Query: 324 GSPVYGQLGN--------PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G Y +LG+ PQ G L R V +A G+ H +T +VY W
Sbjct: 3344 GKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVTDSGQVYAW 3395
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G +G+ G G+T P+LV L D V +ACG++ + A
Sbjct: 3396 GDNDHGQQGSGNTFVNKKPALVIGLDDVFVNRVACGSSHSIA 3437
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 193/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4221 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4280
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4281 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 4338
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN VS+ PK V L G+ V+ I+CG H+A +T++GQ+ T+G G +G LGH
Sbjct: 4339 EDGKLGHGNRVSYDRPKLVEH-LHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGH 4397
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4398 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4445
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4446 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4505
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 4506 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4564
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4565 RLVSALQGKHIVKVTCGSAHTLAL 4588
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 4298 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLV 4357
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4358 EHLHGMSVADIACGSAHSAAITASGQVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4414
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 4415 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 4474
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4475 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4522
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + SG VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4523 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGS 4582
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4583 AHTLALST 4590
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 153/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NRV PK +E + V +IACG H+A +
Sbjct: 4330 GEVYAWGEGE-DGKLGHG-NRV--------SYDRPKLVEHLHGMSVADIACGSAHSAAIT 4379
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G+V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4380 ASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4439
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4440 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4496
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS SG+++
Sbjct: 4497 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 4543
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P V+AL + +V CG + T+AL+TS
Sbjct: 4544 TWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALSTS 4591
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 166/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G ++ G+GT
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGEGT 3135
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V++ VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3136 N--GRLGLG--VTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3191
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR+VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3192 KLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAI------------SSQGELYTWGL 3239
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P VAAL +VACG + T+ALT G V++ G +G+L
Sbjct: 3240 GEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3299
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3300 GRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3358
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3359 VRKPQPIGGLRGRRVIHVAVGALHCLAV 3386
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 144/309 (46%), Gaps = 35/309 (11%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
V+ + C L++++G++ +W + P+ ++ + +A
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAWR----------LSKPEAEPQPLEEAGHETFISIAG 636
Query: 135 -CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
C H A+ + + Y+WG G + LGHG+ + VP ++ LE V S+ CG
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVFCGCT 693
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
++AV+T G L T+G GT+ LGHG+ +P V +L HT VV+V
Sbjct: 694 YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAE-----------HT--VVDV 740
Query: 254 MVGNSSSSNC---SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+G+ + + S G +F WGDGD G+LG+G+ L P V +L P R+ G
Sbjct: 741 ALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRIFAGSQY 798
Query: 311 TVALTTSGHVYTMGSP--VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+VAL++ G VYT G + QL G R+ L + ++A G H L+S
Sbjct: 799 SVALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSS 858
Query: 369 KTEVYTWGK 377
EV+ WG+
Sbjct: 859 SGEVFGWGR 867
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 122/265 (46%), Gaps = 25/265 (9%)
Query: 67 PKALESAVVLDVQNIA--CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
P+ LE A +IA C GRH ++ +SWG RLGHG P I A
Sbjct: 620 PQPLEEAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAA 679
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L ++ V CG ++ +T G+L TWG GTY LGHGN +P V E
Sbjct: 680 LEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTY--ARLGHGNSDDRCLPTLVAALAEHTV 737
Query: 185 VS-SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
V ++ G H+ +TS G +F +GDG +G LG+G+ P VESL R R G
Sbjct: 738 VDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLP--RVQRIFAG 795
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL----VPTCVAALVEP 299
++ A+ S G+++TWG LGH E + VP V++L
Sbjct: 796 SQYSVAL------------SSEGQVYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHK 841
Query: 300 NFCRVACGHSLTVALTTSGHVYTMG 324
+A G + +AL++SG V+ G
Sbjct: 842 RIVDMAVGVAHCLALSSSGEVFGWG 866
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4223 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4273
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4274 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4330
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L V +IACGS H A +T+ +V TWGK
Sbjct: 4331 EVYAWGEGEDGKLGHGNRVSYDRPKLVE-HLHGMSVADIACGSAHSAAITASGQVLTWGK 4389
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4390 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4449
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4450 GRGGSDGCKLPYK 4462
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG G+ RLGHGD A+ VPT +AAL + V CG + + +T G++ T G Y
Sbjct: 653 YSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTY 712
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGHG 386
+LG+ +D + + L++ V ++A GS H LTS+ V+ WG G G+LG+G
Sbjct: 713 ARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 772
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC----------SGCR 436
+ + P LVE+L +V+ I G+ ++ A+ V ++ C GC
Sbjct: 773 NCNGSLQPILVESL--PRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERSVQGCS 830
Query: 437 LP--FNNFKRKRHNCYNCGLVFCHSCSS 462
+P ++ + KR G+ C + SS
Sbjct: 831 VPRLVSSLQHKRIVDMAVGVAHCLALSS 858
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
G++F G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 3126 GRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3185
Query: 324 GSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G G+LG+ + P +VE +K + ++ACGS H A ++S+ E+YTWG G GR
Sbjct: 3186 GEGEDGKLGHGNRTTLDKPRQVEALRAKK-IRDVACGSSHSAAISSQGELYTWGLGEYGR 3244
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
LGHGD + P LV AL ++V +ACG+ + L
Sbjct: 3245 LGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLAL 3282
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
+A+ ++ + Y+ G+ +LG+ + +P ++ L + V+ + CG + AV+T
Sbjct: 644 MAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVFCGCTYSAVITCGG 702
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ TWG+G RLGHG++DDR P+LV AL + V +A G+ ++ L
Sbjct: 703 NLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLAL 752
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA--CGS 360
+V C + + L+ G ++ +L P+A+ P +E ++F+ IA C
Sbjct: 591 QVVCSENQVLLLSQEGKLHAW------RLSKPEAE---PQPLEEAGHETFIS-IAGHCEG 640
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H + S Y+WG G + RLGHGDT R P+ + AL+ V+S+ CG ++A I
Sbjct: 641 RHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVI 698
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 192/385 (49%), Gaps = 29/385 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSL---PKALESAVVLDVQNIACGGRHAALVNKQ 94
WG G G V G N G MDSS P A +S VL + G + V
Sbjct: 3539 WG-GNGQVVYVWGHNHRGQL--ACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSY 3595
Query: 95 GEVFSWGEESGGRLGHG----VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G+V++ G GRLG G + V+ P+L+ L+N+ V G H A++ +G++Y
Sbjct: 3596 GKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVY 3655
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WGDG + G LG GN V+H P+ V L + I+CG +H+A ++ G L+T+G G
Sbjct: 3656 AWGDG--DDGKLGLGNRVTHSKPQLVQS-LSDKCIIDIACGGFHSAAISRYGHLYTWGKG 3712
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKL 268
+G LGHGD + P+ V+ L V+ ACG + + C S +
Sbjct: 3713 RYGRLGHGDYEDYLYPKLVQGLINYHVVKVACG------------SGDAQTMCVTSDDNV 3760
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LGH E+ +P + +L ++ CG +VAL+ +G +YT G Y
Sbjct: 3761 WSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDY 3820
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ ++ + P V G K V + + GS HV LT EVY WG G+LG G
Sbjct: 3821 FRLGHGSSEHVRKPKPVSGLQGKKIV-QFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGT 3879
Query: 388 TDDRNSPSLVEALKDKQVKSIACGT 412
P + ALK K+++ ++CG+
Sbjct: 3880 AHPIARPRPIAALKGKRIQQVSCGS 3904
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 190/385 (49%), Gaps = 25/385 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG D GGLN G K+ P E+ L I G + +V+ +
Sbjct: 2595 VYVWG--LNDKGQLGGLN------GSKVKR--PTFNEALTALKPIEIVGGSKSLFIVSNE 2644
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G+VF G+ SGGRLG V P+ I LS I+ VA G H A++L G + +W
Sbjct: 2645 GKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSW 2704
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG G LGHG+ ++ PK ++ L V I+CG H+A +TS G+L+T+G G +
Sbjct: 2705 GDG--EDGKLGHGDILTLDTPKLIDSLLAK-RVFYIACGSAHSAAITSDGELYTWGQGQY 2761
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGH D S P+ V+ G + ACG + + S G +++WG
Sbjct: 2762 GRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTL----------ALDSEGNVYSWG 2811
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + P V LV ++ CG +VALT +G V+T G Y +LG
Sbjct: 2812 DGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLG 2871
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ + + +L ++ IA G+ H ++++ +VY WG +G+ G+G T+
Sbjct: 2872 LGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQ 2931
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV + ++ + CG++ + A
Sbjct: 2932 EPRLVTNFNNIKINRVGCGSSQSIA 2956
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 145/281 (51%), Gaps = 17/281 (6%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
GGRH ++ GEV++WG+ G+LG G P+L+ +LS+ I +ACG +H+ A+
Sbjct: 3641 GGRHCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAI 3700
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSA 201
+ G LYTWG G Y G LGHG+ + PK V G L HV ++CG T VTS
Sbjct: 3701 SRYGHLYTWGKGRY--GRLGHGDYEDYLYPKLVQG-LINYHVVKVACGSGDAQTMCVTSD 3757
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++++GDG +G LGH +S +P ++ESL G ++ CG + A+
Sbjct: 3758 DNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVAL----------- 3806
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
++G L+TWG GD RLGHG E P V+ L + + G +ALT G VY
Sbjct: 3807 -SANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVY 3865
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G GQLG+ A R L +++++CGS H
Sbjct: 3866 AWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAH 3906
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 153/291 (52%), Gaps = 29/291 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G DG LG G NRV S P+ ++S + +IACGG H+A ++
Sbjct: 3652 GEVYAWGDG-DDGKLGLG-NRVTH--------SKPQLVQSLSDKCIIDIACGGFHSAAIS 3701
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
+ G +++WG+ GRLGHG D L+PKL+ L N ++ VACG + T VT +++
Sbjct: 3702 RYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVW 3761
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGH S +P ++ L G + I CG + +++ G L+T+G G
Sbjct: 3762 SWGDGDY--GKLGHNISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P+ V L+G + V+ + G H A+ + G+++
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD------------DGEVYA 3866
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGH 319
WGD D+G+LG G P +AAL +V+CG HS A + H
Sbjct: 3867 WGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFAWASEEACH 3917
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 165/329 (50%), Gaps = 23/329 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+ WG G+L S V P D+LS + V GE AVT G +Y G
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVY--ASGY 3603
Query: 157 YNFGLLGHG--NEVSHWV--PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G LG G N + +V P+ V G L I +++ G H +++ G+++ +GDG
Sbjct: 3604 TESGRLGIGPYNPKNPYVVTPQLVQG-LNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDD 3662
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G+R + S P+ V+SL + ACG +H+AA+ G L+TWG
Sbjct: 3663 GKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAI------------SRYGHLYTWG 3710
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G GRLGHGD E L P V L+ + +VACG + T+ +T+ +V++ G YG+
Sbjct: 3711 KGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGK 3770
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N KLP ++E LS + +I CGS L++ +YTWGKG RLGHG ++
Sbjct: 3771 LGHNISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSE 3829
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P V L+ K++ + G+ A+
Sbjct: 3830 HVRKPKPVSGLQGKKIVQFSTGSLHVLAL 3858
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 168/333 (50%), Gaps = 21/333 (6%)
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACGEYHTCAVTLSGDL 149
V+ + V+ WG G+LG S V P +AL+ + IE+V G V+ G +
Sbjct: 2589 VDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVG-GSKSLFIVSNEGKV 2647
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG-IHVSSISCGPWHTAVVTSAGQLFTFG 208
+ GD + + +VS P+++ G + I ++ G H ++ G++ ++G
Sbjct: 2648 FVCGDSSGGRLGIPFCGKVSS--PRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWG 2705
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG G LGHGD ++ P+ ++SL R ACG H+AA+ S G+L
Sbjct: 2706 DGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAIT------------SDGEL 2753
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSP 326
+TWG G GRLGH D+ ++ P V V N +VACG + T+AL + G+VY+ G
Sbjct: 2754 YTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDG 2813
Query: 327 VYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
+G+LG +DG P +VE +L V +I CG+ LT+ +V+TWGKG RLG
Sbjct: 2814 DFGKLGRGGSDGCCTPQKVE-RLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGL 2872
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G + P+LV LK + IA GT A+
Sbjct: 2873 GRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 113/253 (44%), Gaps = 34/253 (13%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++ +G G L D V P +SL L+ + G AV
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVT------------ 3593
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAK----LVPTCVAALVEPNFCRVAC--GHSLTVALTTS 317
S GK++ G + GRLG G K + P V L N +VA G +AL+T+
Sbjct: 3594 SYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGL--NNIIKVAVNSGGRHCLALSTT 3651
Query: 318 GHVYTMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VY G G+LG N K P V+ LS + +IACG +H A ++ +YTW
Sbjct: 3652 GEVYAWGDGDDGKLGLGNRVTHSK-PQLVQS-LSDKCIIDIACGGFHSAAISRYGHLYTW 3709
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG----- 426
GKG GRLGHGD +D P LV+ L + V +ACG+ +C+ + W G
Sbjct: 3710 GKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYG 3769
Query: 427 -VDQSMCSGCRLP 438
+ ++ C+LP
Sbjct: 3770 KLGHNISESCKLP 3782
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 44/305 (14%)
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLY--TWGDGTYNFGLLGHGNEVSHWVPKRVN 177
K+I L +++E V C VT SG L+ ++ + NF + +N
Sbjct: 443 KVILTLERLHVESVVCSRNEILVVTTSGTLHFISYSIDSLNFE-----------EKQMMN 491
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLR 236
P++ + V + VT G+++++G FG LGHG + S P + + L
Sbjct: 492 VPMKSVDVYDET-----YLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLI 546
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
V +CG AAV E GKL+ WG ++ H P V ++
Sbjct: 547 VVMVSCGKDFCAAVTE------------DGKLYMWG-----KILHSSN-CCYTPELVKSI 588
Query: 297 VEPNFCRVACGHSL--TVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-V 353
E + +V+CG S+ T+AL+ G+V++ + + D K N + + + +
Sbjct: 589 SEWHVSKVSCGSSINNTLALSREGYVFSFEY----RNSDRGCDDKSLNVIPSMIVFDYEI 644
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
I C + AV+ V+TWG+G N LGH ++ N P V+ L KQV S++ +
Sbjct: 645 VSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADD 704
Query: 414 FTAAI 418
+ A+
Sbjct: 705 YILAL 709
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 93/226 (41%), Gaps = 66/226 (29%)
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG--LRTVRAACGVWHTAAVVEVM 254
+V++ G++F GD + G LG VS PR++ L ++TV G H A+
Sbjct: 2640 IVSNEGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMAL---- 2695
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
GK+ +WGDG+ G+L GH
Sbjct: 2696 --------SLDGKVLSWGDGEDGKL---------------------------GH------ 2714
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + T+ +P D L RV IACGS H A +TS E+YT
Sbjct: 2715 ---GDILTLDTP-------KLIDSLLAKRVF---------YIACGSAHSAAITSDGELYT 2755
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
WG+G GRLGH D +++P LV+ K + +ACG+ + L
Sbjct: 2756 WGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLAL 2801
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D+ G+V+ WG+G + GG + G C P+ +E V V I CG + +
Sbjct: 2802 DSEGNVYSWGDGDFGKLGRGGSD--GCC--------TPQKVERLVGHRVVQIECGAQFSV 2851
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ G+V++WG+ RLG G V P L++ L + I+ +A G H AV+ GD+
Sbjct: 2852 ALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDV 2911
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
Y WGD + G G+G ++ P+ V I ++ + CG
Sbjct: 2912 YCWGDNDH--GQQGNGTTNANQEPRLVTN-FNNIKINRVGCG 2950
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 115/271 (42%), Gaps = 35/271 (12%)
Query: 91 VNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
V ++GEV+SWG G LGHG S P+ I A S + + +V+CG+ AVT G L
Sbjct: 507 VTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKL 566
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW--HTAVVTSAGQLFTF 207
Y WG +L N + P+ V E HVS +SCG +T ++ G +F+F
Sbjct: 567 YMWG------KILHSSN--CCYTPELVKSISEW-HVSKVSCGSSINNTLALSREGYVFSF 617
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+ G D+ IP + + V C A + +C++
Sbjct: 618 -EYRNSDRGCDDKSLNVIPSMI--VFDYEIVSIYCHNDVNAVI-----------DCANN- 662
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+FTWG G+ LGH + P V L ++ +ALT +G VY
Sbjct: 663 VFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVY-----C 717
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
+GQL N P + L V++IAC
Sbjct: 718 WGQLDNENTTQCRPVKC---LMNRQVKKIAC 745
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 31/243 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G LG G + S F P+ + + L V ++CG A V
Sbjct: 511 GEVYSWGVNEF-GALGHG--QKYSSFPT------PEPIVAFSKLIVVMVSCGKDFCAAVT 561
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G+++ W G++ H + P+L+ ++S ++ V+CG + LS + Y +
Sbjct: 562 EDGKLYMW-----GKILHSSNC-CYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVF 615
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
Y G ++ + +P + E + SI C AV+ A +FT+G G
Sbjct: 616 S-FEYRNSDRGCDDKSLNVIPSMIVFDYE---IVSIYCHNDVNAVIDCANNVFTWGRGNN 671
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
+LGH + V+ P+EV+ L G + + + A+ + +G+++ WG
Sbjct: 672 NMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTD------------TGQVYCWG 719
Query: 273 DGD 275
D
Sbjct: 720 QLD 722
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPN-RVEGKLSKSFVEEIACGSYHVAVLTSKT 370
+A+T G VY+ G +G LG+ Q P SK V ++CG A +T
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
++Y WGK + ++ +P LV+++ + V ++CG++ + L +
Sbjct: 565 KLYMWGKILHS------SNCCYTPELVKSISEWHVSKVSCGSSINNTLALSR 610
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 201/391 (51%), Gaps = 31/391 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V +WG + + GGL GS + SS+ L+ +IA G + +V++
Sbjct: 3030 VLVWGLNDKEQL--GGLK--GSKVKLPTYSSVLSQLKPI------HIAGGSKSLFIVSQD 3079
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++++ GE + GRLG G +++V PK + LS ++ VA G H A+TL G +++W
Sbjct: 3080 GKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSW 3139
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN ++ PK + L + I+CG H+A +TS+G+L+T+G G +
Sbjct: 3140 GEG--EDGKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3196
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFT 270
G LGHGD + P+ V +L+ R V+ ACG + + C G +F+
Sbjct: 3197 GRLGHGDNCTQLKPKLVTALQDHRVVQVACG------------SRDAQTLCLTEDGLVFS 3244
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G E +P V L ++ CG ++ALT +G V+T G Y +
Sbjct: 3245 WGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYR 3304
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + P ++G K + +A G+ H +T +VY WG +G+ G G+T
Sbjct: 3305 LGHGTDQHVRKPTPIQGLRGKKVI-HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTI 3363
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
PSLV L V +ACG++ + A L
Sbjct: 3364 VNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3394
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/400 (33%), Positives = 199/400 (49%), Gaps = 28/400 (7%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL---PKALESAVVLDVQNIACGGRHAALVN 92
F WG + + G G N G G +D S P E+ +L IA G + V
Sbjct: 4083 FSWGGAST--IFGWGHNHRGQLGG--LDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVT 4138
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++ G +GGRLG G V P L+++L ++ I+ VA G H A++ G+++
Sbjct: 4139 PDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVF 4198
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G G LGHGN S+ PK + L GI V I+CG H+A +T G + T+G G
Sbjct: 4199 SWGEG--EDGKLGHGNRDSYDRPKLIES-LSGIGVVDIACGSAHSACITIQGHVLTWGKG 4255
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KL 268
+G LGHGD + P+ VE+L G R + ACG + + C + +
Sbjct: 4256 RYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNV 4303
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + VP + +L +V CG +VALT SG VYT G Y
Sbjct: 4304 WSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDY 4363
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V K + IA GS H + EV+TWG G+LG G
Sbjct: 4364 HRLGHGNTDHVRRPKKVAALQGKKII-SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGT 4422
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV 427
P LV++L+ K + + CG+ T A+ ++ V
Sbjct: 4423 VSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQLSEAV 4462
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 170/333 (51%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ GEGT +G LG G N V +P + S V+ + GG+HA +
Sbjct: 3080 GKLYACGEGT-NGRLGLGHNN-----NVPTPKQVP--ILSQYVVKKVAVHSGGKHAMALT 3131
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG + PKLI+ L I +ACG H+ A+T SG+LYTW
Sbjct: 3132 LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTW 3191
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L+ V ++CG T +T G +F++GDG
Sbjct: 3192 GLGEY--GRLGHGDNCTQLKPKLVTA-LQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDG 3248
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + SIP +V+ L G+ ++ CG + A+ + +G+++T
Sbjct: 3249 DFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTK------------AGEVWT 3296
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + PT + L VA G +A+T SG VY G +GQ
Sbjct: 3297 WGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQ 3356
Query: 331 LGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K P+ V G L FV +ACGS H
Sbjct: 3357 QGSGNTIVNKKPSLVLG-LDGIFVNRVACGSSH 3388
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 155/288 (53%), Gaps = 31/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALV 91
G+VF WGEG DG LG G NR DS PK +ES + V +IACG H+A +
Sbjct: 4195 GEVFSWGEGE-DGKLGHG-NR---------DSYDRPKLIESLSGIGVVDIACGSAHSACI 4243
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDL 149
QG V +WG+ GRLGHG D L PKL++AL +AC G+ T +T ++
Sbjct: 4244 TIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNV 4303
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WGDG Y G LG G VP ++ L G+ V+ + CG + +T +G ++T+G
Sbjct: 4304 WSWGDGDY--GKLGRGGSDGCKVPMKIES-LAGLGVTKVECGSQFSVALTRSGSVYTWGK 4360
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKL 268
G + LGHG+ V P++V +L+G + + A G H A CS +G++
Sbjct: 4361 GDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEV 4407
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
FTWGD D+G+LG G A P V +L + +V CG + T+AL+T
Sbjct: 4408 FTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALST 4455
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 170/329 (51%), Gaps = 23/329 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+V WG +LG S V P LS + +A G V+ G LY G+G
Sbjct: 3029 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYACGEG 3088
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTF 212
T LGH N V PK+V P+ +V ++ G H +T G++F++G+G
Sbjct: 3089 TNGRLGLGHNNNVP--TPKQV--PILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGED 3144
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+R ++ P+ +E+L+ R ACG H+AA+ SSG+L+TWG
Sbjct: 3145 GKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAIT------------SSGELYTWG 3192
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQ 330
G+ GRLGHGD +L P V AL + +VACG + T+ LT G V++ G +G+
Sbjct: 3193 LGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGK 3252
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG ++G +P++V+ +L+ V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3253 LGRGGSEGCSIPHQVD-RLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQ 3311
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
P+ ++ L+ K+V +A G A+
Sbjct: 3312 HVRKPTPIQGLRGKKVIHVAVGALHCLAV 3340
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 139/267 (52%), Gaps = 21/267 (7%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
K LE +V + C GRH + G+V+SWG GGRLGHG S P I AL++
Sbjct: 603 KGLECTIVQLAAH--CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALAD 660
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG--PLEGIHV 185
+ V CG ++ A+T SG+LYTWG GTY G LGHGN +VP V +HV
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRGTY--GRLGHGNSEDKYVPTLVTALKAHRVVHV 718
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++ CG H+ VT AG F +GDG FG LG+ S+P +V+ +A+C
Sbjct: 719 -ALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVD------LPQASC--- 768
Query: 246 HTAAVVEVMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
VV+V G+ S + G ++TWG G GRLGHG+ E VP V AL +
Sbjct: 769 ----VVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDL 824
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQL 331
A G + +ALT SG +Y G + Q+
Sbjct: 825 AVGLAHCLALTASGELYGWGRNDFQQI 851
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 160/347 (46%), Gaps = 33/347 (9%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P +V G I + C H + S+G ++++G G G LGHGD + +P + +L
Sbjct: 599 PAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAAL 658
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+ CG ++AA+ +SG+L+TWG G GRLGHG+ E K VPT
Sbjct: 659 ADRQVTGVFCGSSYSAAIT------------ASGELYTWGRGTYGRLGHGNSEDKYVPTL 706
Query: 293 VAALVEPNFCRVA--CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLS 349
V AL VA CG + ++ +T +G + G +G+LGN G +P +V+
Sbjct: 707 VTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLP-Q 765
Query: 350 KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
S V ++ GS LT + VYTWGKG GRLGHG+++ P +V+AL+ K++ +A
Sbjct: 766 ASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLA 825
Query: 410 CG----TNFTAAICLHKWVSGVDQSMCSGC--RLP------FNNFKRKRHNCYNCG---- 453
G TA+ L+ W Q +C C R P R G
Sbjct: 826 VGLAHCLALTASGELYGWGRNDFQQICPECVTRDPIITAPILTTPPTLRVAGMAAGVAQS 885
Query: 454 LVFCHSCSSKKSLKASMAPNPNK-PYRVCDNCFNKLRKTFDTDGSSH 499
L +CHS S K + ++ +R+ D + T TD S H
Sbjct: 886 LFWCHSSSHGIPAKIPFVVDLSEHTFRLLDQLLCMVSVTSSTDASRH 932
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 158/324 (48%), Gaps = 32/324 (9%)
Query: 62 MDSSLPKALESAV--VLD-VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVL 117
+D ++P+ + + +LD V+ I C ++ G V L H + ++
Sbjct: 546 IDGAMPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVL--------YLSHAISMTEDN 597
Query: 118 HPKLIDALSNMNIELVA-CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
+P + L ++L A C H A+ SGD+Y+WG G + G LGHG+ + +P R+
Sbjct: 598 YPAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSG--DGGRLGHGDTSAKELPTRI 655
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L V+ + CG ++A +T++G+L+T+G GT+G LGHG+ + +P V +LK R
Sbjct: 656 -AALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHR 714
Query: 237 TVRAA--CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
V A CG H+ V E +G F WGDGD G+LG+ VP V
Sbjct: 715 VVHVALGCGDAHSLCVTE------------AGLAFAWGDGDFGKLGNESCVGTSVPVQVD 762
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFV 353
+V G +VALT G VYT G G+LG+ ++ +P V+ K V
Sbjct: 763 LPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIV 822
Query: 354 EEIACGSYHVAVLTSKTEVYTWGK 377
++A G H LT+ E+Y WG+
Sbjct: 823 -DLAVGLAHCLALTASGELYGWGR 845
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 122/245 (49%), Gaps = 27/245 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDV+ WG G G G LG G LP + + V + CG ++A +
Sbjct: 628 GDVYSWGSGDG-GRLGHGDTSA---------KELPTRIAALADRQVTGVFCGSSYSAAIT 677
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--CGEYHTCAVTLSGDLY 150
GE+++WG + GRLGHG D P L+ AL + VA CG+ H+ VT +G +
Sbjct: 678 ASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WGDG +FG LG+ + V VP +V+ P + V + G + +T G ++T+G G
Sbjct: 738 AWGDG--DFGKLGNESCVGTSVPVQVDLP-QASCVVKVFSGSQFSVALTREGTVYTWGKG 794
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHG+ + +P+ V++L+G + V A G+ H A+ +SG+L+
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALT------------ASGELYG 842
Query: 271 WGDGD 275
WG D
Sbjct: 843 WGRND 847
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
S K+ WG DK +LG G K +K+ +PT + L + +A G ++ G +Y
Sbjct: 3027 SSKVLVWGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLYAC 3085
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANG 381
G G+LG + + LS+ V+++A G H LT +V++WG+G +G
Sbjct: 3086 GEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDG 3145
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+LGHG+ P L+E L+ K+++ IACG++ +AAI L+ W
Sbjct: 3146 KLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTW 3191
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+++ WG GT G LG G + K +L AL++ V+ V + CG H+
Sbjct: 678 ASGELYTWGRGTY-GRLGHGNSE------DKYVPTLVTALKAHRVVHVA-LGCGDAHSLC 729
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V + G F+WG+ G+LG+ P +D + V G + A+T G +Y
Sbjct: 730 VTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVY 789
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
TWG G + G LGHGN VPK V LEG + ++ G H +T++G+L+ +G
Sbjct: 790 TWGKG--HGGRLGHGNSEHSPVPKMVQA-LEGKKIVDLAVGLAHCLALTASGELYGWGRN 846
Query: 211 TF 212
F
Sbjct: 847 DF 848
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK 350
T L+ ++ C + LT SG V + + + P +V+G L
Sbjct: 555 TATIDLLLDQVRQIVCAENCVYILTDSGTVLYLSHAI------SMTEDNYPAQVKG-LEC 607
Query: 351 SFVEEIA-CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
+ V+ A C HV L S +VY+WG G GRLGHGDT + P+ + AL D+QV +
Sbjct: 608 TIVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVF 667
Query: 410 CGTNFTAAIC----LHKWVSG 426
CG++++AAI L+ W G
Sbjct: 668 CGSSYSAAITASGELYTWGRG 688
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+G R+G G P ++ V ++A G H V
Sbjct: 3292 GEVWTWGKG--------DYYRLG--HGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVT 3341
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
G+V++WG+ G+ G G P L+ L + + VACG H+ A +L
Sbjct: 3342 DSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3394
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
IA GS + +++ ++Y G+G NGRLG G ++ +P V L VK +A +
Sbjct: 3066 IAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGK 3125
Query: 416 AAICL------HKWVSGVDQSMCSGCRLPF------NNFKRKRHNCYNCG 453
A+ L W G D + G RL + KR CG
Sbjct: 3126 HAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACG 3175
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 186/382 (48%), Gaps = 49/382 (12%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ + L VQ + CGG+HAA++ GE+F+WG GRLGHG + P+ I+AL
Sbjct: 262 PVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALE 321
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-- 184
+ VACG +T AVT SG+LYTWG G G LG G+ P RV EG+H
Sbjct: 322 GIPCVQVACGFAYTAAVTASGELYTWGAG--ENGRLGLGDVADRHTPSRV----EGLHSK 375
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG-----LRTVR 239
V + G H+ V+T G ++ FG + GHGD + V PR + + G +R +
Sbjct: 376 VKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGDHEDVLDPRLIPTFSGGSGALVRQIS 433
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--------KEAKLVPT 291
G +HT A+ G+++ WG +LG G+ + A +P+
Sbjct: 434 VGPGGYHTMALT------------CQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPS 481
Query: 292 --CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL------GNPQADGKLPNR 343
V +LV N +V G + ALT G +Y G GQL G PQ + P +
Sbjct: 482 PQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQ 541
Query: 344 VE----GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA 399
+ +L +++IACG H + EV+++G G G+LGH T + P LV+A
Sbjct: 542 ADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQA 601
Query: 400 LKD--KQVKSIACGTNFTAAIC 419
LK +++ +ACG N T +
Sbjct: 602 LKSTRREIMHVACGNNCTLVLA 623
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 131/262 (50%), Gaps = 29/262 (11%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P V G L G+ V + CG H AV+T G++FT+G G FG LGHG+R+ + PR +E+L
Sbjct: 262 PVVVQGLL-GLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEAL 320
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+G+ V+ ACG +TAAV +SG+L+TWG G+ GRLG GD + P+
Sbjct: 321 EGIPCVQVACGFAYTAAVT------------ASGELYTWGAGENGRLGLGDVADRHTPSR 368
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSK 350
V L V G + LT G VY G Y G+ + D +L G S
Sbjct: 369 VEGL-HSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVLDPRLIPTFSGG-SG 426
Query: 351 SFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGRLGHGD--TDDRN--------SPSLVE 398
+ V +I+ G YH LT + +VY WG +LG G+ T RN SP LVE
Sbjct: 427 ALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVE 486
Query: 399 ALKDKQVKSIACGTNFTAAICL 420
+L + + G +AA+ +
Sbjct: 487 SLVGMNIVKVVAGWGHSAALTV 508
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL--V 133
L ++ IACGG H+ V + GEV+S+G G+LGH + P+L+ AL + E+ V
Sbjct: 553 LKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHV 612
Query: 134 ACGEYHTCAVTLSG 147
ACG + C + L+G
Sbjct: 613 ACG--NNCTLVLAG 624
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 196/390 (50%), Gaps = 22/390 (5%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVN 92
D +I G + G G N G G++ +P E+ L + G + V
Sbjct: 191 DDWILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 250
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y
Sbjct: 251 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 310
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+ G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G
Sbjct: 311 SWGEA--EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 367
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKL 268
+G LGH D + P+ VE+L+G R V ACG + + C +
Sbjct: 368 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG------------SGDAQTLCLTDDDTV 415
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + VP + +L +V CG +VALT SG VYT G Y
Sbjct: 416 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 475
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V+G K + IA GS H T EVYTWG G+LG G
Sbjct: 476 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 534
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T+ P LV AL+ K+V +ACG+ T A
Sbjct: 535 TNAIQRPRLVAALQGKKVNRVACGSAHTLA 564
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 307 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 356
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + VACG + T +T ++
Sbjct: 357 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVW 416
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 417 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 473
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 474 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 521
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 522 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 568
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 569 --KPASAGKLPAQV 580
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V ++ACG A
Sbjct: 357 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDVACGSGDAQT 406
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 407 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 466
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 467 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 523
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 524 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 576
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 200 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 254
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 255 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 300
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 301 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 360
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V ++ACGS LT V++WG
Sbjct: 361 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGD 420
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 421 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 461
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 200 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 250
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 251 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 307
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 367
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V +ACG+ +CL
Sbjct: 368 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 409
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 182/359 (50%), Gaps = 24/359 (6%)
Query: 119 PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P L++++ ++ I+ VA G H A++ G +Y+WG+G + G LGHGN+VS+ PK +
Sbjct: 3 PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG--DDGKLGHGNKVSYDRPKLI 60
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L G+ + I+CG H+A +TSAG L+T+G G +G LGHGD P+ VE+L+ +
Sbjct: 61 ED-LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
+ ACG + + C + +++WGDGD G+LG G + VP +
Sbjct: 120 VIDVACG------------SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKID 167
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFV 353
+L +V CG +VALT SG VYT G Y +LG+ D + P +V K +
Sbjct: 168 SLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKII 227
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
IA GS H + K EV+TWG G+LG G T + P LV AL+ K++ +ACG+
Sbjct: 228 -SIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSA 286
Query: 414 FTAAICLHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAP 472
T A K M + + ++ K ++ LV H + +M P
Sbjct: 287 HTLAWSTAK---ATQSRMPASTPMEYDLVKDLSYSVLRNRLVLLHHFAELLCPALAMFP 342
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 154/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G K+ PK +E + +++ +IACGG H+A +
Sbjct: 33 GHVYSWGEGD-DGKLG---------HGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT 82
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G +++WG+ GRLGHG D L PK+++AL + + VAC G+ T VT +++
Sbjct: 83 SAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVW 142
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 143 SWGDGDY--GKLGRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWGKG 199
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLF 269
+ LGHG V PR+V +L+G + + A G H A CS G++F
Sbjct: 200 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA-------------CSDKGEVF 246
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P V AL RVACG + T+A +T+
Sbjct: 247 TWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLAWSTA 294
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 150/301 (49%), Gaps = 19/301 (6%)
Query: 66 LPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
+P LES + ++ +A GG+H ++ +G V+SWGE G+LGHG PKLI+
Sbjct: 2 IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIE 61
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
L + I +ACG +H+ A+T +G LYTWG G Y G LGHG+ PK V L+
Sbjct: 62 DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY--GRLGHGDSDDQLRPKVVEA-LQDY 118
Query: 184 HVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V ++CG T VT ++++GDG +G LG G +P +++SL GL V+
Sbjct: 119 KVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE 178
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG + A+ SG ++TWG GD RLGHG + P VAAL
Sbjct: 179 CGSQFSVALTR------------SGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKI 226
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+A G VA + G V+T G GQLG+ R+ L + +ACGS
Sbjct: 227 ISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSA 286
Query: 362 H 362
H
Sbjct: 287 H 287
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Query: 288 LVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRV 344
++PT + ++ +VA G +AL++ GHVY+ G G+LG+ + P +
Sbjct: 1 MIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLI 60
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
E L V+ IACG +H A +TS +YTWGKG GRLGHGD+DD+ P +VEAL+D +
Sbjct: 61 EDLLGVEIVD-IACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119
Query: 405 VKSIACGTNFTAAICL 420
V +ACG+ +C+
Sbjct: 120 VIDVACGSGDAQTLCV 135
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3963 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 4019
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 4020 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 4079
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L G V I+ G H+A +T+AG+L+T+G G +G L
Sbjct: 4080 --EDGKLGHGNRSPCDRP-RVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRL 4136
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 4137 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 4184
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4185 GDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4244
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4245 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4303
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 4304 RPRLVAALQGKKINRVACGSAHTLA 4328
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 200/394 (50%), Gaps = 35/394 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2965 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTAE 3014
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFS 3074
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3181
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T +
Sbjct: 3182 GDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLA 3241
Query: 332 GNPQADGKLPNRVEGKLSKSFV----EEIACGSYH----VAVLTSKTEVYTWGKGANGRL 383
L K+S FV C +Y + ++ SK +VY WG +G+
Sbjct: 3242 VXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISK-KVYAWGDNDHGQQ 3300
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G+G T P+LV L+ +++ +ACG++ + A
Sbjct: 3301 GNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 160/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES +V +IA GG H+A +
Sbjct: 4071 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGTEVVDIAAGGAHSACIT 4120
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+++WG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 4121 AAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4180
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V+ + CG + +T +G ++T+G G
Sbjct: 4181 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGVGVTKVECGSQFSVALTKSGAVYTWGKG 4237
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4238 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4285
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4286 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4332
Query: 331 LGNPQADGKLPNRV 344
P GKLP++V
Sbjct: 4333 --KPANAGKLPSQV 4344
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 194/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E+ L V +AC + ++++ G++++ +++ L P+L+ L+
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYT----------QAYNNNTLGPQLVQGLA 491
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A H A++ + +L++WG G + G LGHG+ VS PK V+ G
Sbjct: 492 SRNIVKIAAHPDGQHYLALSATSELFSWGCG--DGGRLGHGDTVSLEEPKLVSALSGKQT 549
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G V I+CG ++A +T+ G+L+T+G G +G LGHG + ++P V LKGL+ V +
Sbjct: 550 GKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVS 609
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T +V E +G++++WGDGD G+LG G + P + L +
Sbjct: 610 CGSGDAQTLSVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG ++A+T G VY+ G +LG+ + + P + G K V ++A
Sbjct: 658 DIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVV-DVAV 716
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT EVY+W G+N + H DT + PS++ L K + I+CG +
Sbjct: 717 GSTHCLALTESGEVYSW--GSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCGPAQSF 774
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 775 A-----WSSCSEWSI--GLRVPF 790
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 168/332 (50%), Gaps = 40/332 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV SWG LG ++V P +AL+N+ + VAC E ++ +G LYT
Sbjct: 424 EVISWG-----LLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V G L ++ I+ P H +++ +LF++G G G
Sbjct: 476 AYNNNTLG---------PQLVQG-LASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLRT----VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD S+ P+ V +L G +T + ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAIT------------ADGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + VP V L V+CG + T+++T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + ++ CGS +T +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P ++ L+ K+V +A G+ A+
Sbjct: 693 TEEHVRYPKIMNGLQGKKVVDVAVGSTHCLAL 724
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/337 (33%), Positives = 155/337 (45%), Gaps = 63/337 (18%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHA 88
A G V+ GE T +G LG G++ G+ +P+ + + V+ +A GGRHA
Sbjct: 3013 AEGKVYACGEAT-NGRLGLGISS-GTV-------PIPRQITALSNYVVKKVAVHSGGRHA 3063
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+
Sbjct: 3064 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFT 206
LYTWG G Y G LGHG+ + PK V L G V ++CG T +T G +F+
Sbjct: 3124 LYTWGLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG------------VW------HTA 248
+GDG FG LG G + +IP+ +E L G + CG VW H
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCL 3240
Query: 249 AV-----------------VEVMVGNSSSSNCS------------SGKLFTWGDGDKGRL 279
AV V ++ C+ S K++ WGD D G+
Sbjct: 3241 AVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQ 3300
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G+G PT V L RVACG S +VA TT
Sbjct: 3301 GNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWTT 3337
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 145/295 (49%), Gaps = 40/295 (13%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG +LG S + P + LS +N+ VA G AVT G +Y G+
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEA 3023
Query: 156 TYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G LG G +S++V K+V ++ G H +T G+
Sbjct: 3024 TN--GRLGLGISSGTVPIPRQITALSNYVVKKV----------AVHSGGRHATALTVDGK 3071
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------ 3119
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVY 321
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V+
Sbjct: 3120 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 3179
Query: 322 TMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
+ G +G+LG ++G +P +E +L+ V +I CG+ LT V+TW
Sbjct: 3180 SWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQAVCQIECGAQFSLALTKSGVVWTW 3233
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 13/242 (5%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTV 238
L ++V ++ G VT+ G+++ G+ T G LG G +V IPR++ +L
Sbjct: 2993 LSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVK 3052
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
+ A H+ G +++ GK+F+WG+GD G+LGH + P + AL
Sbjct: 3053 KVAV---HSG-------GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 3102
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
+ACG S + A+T+SG +YT G YG+LG+ +L ++ L V ++AC
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162
Query: 359 GSY--HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS LT + V++WG G G+LG G ++ N P +E L + V I CG F+
Sbjct: 3163 GSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSL 3222
Query: 417 AI 418
A+
Sbjct: 3223 AL 3224
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 111/222 (50%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 4014
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 4015 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L + V +IA G H A +T+ E+YTWGKG
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKG 4131
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 4132 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4173
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3964 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 4018
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 4019 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 4064
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L +A G + + +T +G
Sbjct: 4065 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGE 4124
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4125 LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 4184
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4185 GDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVAL 4225
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 9/165 (5%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K+F WG DK +LG G K +K+ VP+ L N +VA G A+T G VY G
Sbjct: 2964 KVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGE 3022
Query: 326 PVYGQLGNPQADGKLP-NRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG + G +P R LS V+++A G H LT +V++WG+G +G+
Sbjct: 3023 ATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 3082
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
LGH + + P L+EALK K+++ IACG++ +AAI L+ W
Sbjct: 3083 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G AV
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT----------- 3012
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
+ GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3013 -AEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGK 3071
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 3072 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 3130
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 85/162 (52%), Gaps = 17/162 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G L R GS G K PK +E LD+ + CG + + +
Sbjct: 624 GQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLIEKLQDLDIVKVRCGSQFSIAIT 673
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V+SWG+ RLGHG + V +PK+++ L + VA G H A+T SG++Y+W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSW 733
Query: 153 G--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G D +F L ++ VP + G L+ H+ ISCGP
Sbjct: 734 GSNDQCQHFDTL----RIAKPVPSVLPG-LDSKHIVGISCGP 770
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 192/373 (51%), Gaps = 27/373 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GG+ GS V + S AL +IA G + +V+
Sbjct: 3059 VFVWGLNDKDQL--GGVK--GSKVKVPVFSPALSALRPV------HIAGGSKTLFIVSHD 3108
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTW 152
G++F+ GE + GRLG G ++V P+ LS++ + VA G H A+T G +Y+W
Sbjct: 3109 GKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSW 3168
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LGHGN ++ P+ + L G V SI+CG H+A VT+ G L+T+G G +
Sbjct: 3169 GEG--EDGKLGHGNRITLEAPRLIES-LAGERVISIACGSAHSACVTARGHLYTWGLGEY 3225
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD +P+ VE+L R ++ ACG + + + GK+F+WG
Sbjct: 3226 GRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTL----------ALTACGKVFSWG 3275
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G + +P V L +V CG ++ALT G V+T G Y +LG
Sbjct: 3276 DGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLG 3335
Query: 333 NP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ A + P VE L V +A G+ H +TS+ +V+ WG +G+ G+G T
Sbjct: 3336 HGCDAHVRRPTLVEA-LRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVN 3394
Query: 392 NSPSLVEALKDKQ 404
P+LV ++ Q
Sbjct: 3395 RRPALVAGVEGVQ 3407
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 173/335 (51%), Gaps = 21/335 (6%)
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+L N +VF WG +LG S V P ALS + +A G V+ G
Sbjct: 3051 SLPNDCPKVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGSKTLFIVSHDGK 3110
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFT 206
L+ G+GT LGH N VS R N L + V ++ G H +T+ G++++
Sbjct: 3111 LFACGEGTNGRLGLGHSNNVS---TPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYS 3167
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G+G G LGHG+R ++ PR +ESL G R + ACG H+A V + G
Sbjct: 3168 WGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVT------------ARG 3215
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMG 324
L+TWG G+ GRLGHGD +LVP V AL +VACG + T+ALT G V++ G
Sbjct: 3216 HLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWG 3275
Query: 325 SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+G+LG +DG +P VE +L+ V ++ CG+ LT EV+TWGKG RL
Sbjct: 3276 DGDFGKLGRGGSDGCAIPMNVE-RLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRL 3334
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GHG P+LVEAL+ ++V +A G A+
Sbjct: 3335 GHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAV 3369
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 187/378 (49%), Gaps = 23/378 (6%)
Query: 38 WGEGT-GDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
W G+ G V G G N G GV+ P + L+ + G + V G
Sbjct: 3944 WNGGSRGCAVYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDG 4003
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWG 153
+V++ G +GGRLG G V P L+ ++ ++ I VAC G H A++ G++Y+WG
Sbjct: 4004 KVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWG 4063
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+G G LGHGN VS+ PK + L G+ V I+CG H+A +T+ G+++T+G G +G
Sbjct: 4064 EG--EDGKLGHGNRVSYDRPKLITA-LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYG 4120
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTW 271
LGHGD + IP+ VE+L R + ACG + + C +++W
Sbjct: 4121 RLGHGDSEDQLIPKLVEALSSFRVIDVACG------------SGDAQTLCITDDDNVWSW 4168
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E +P + L +V CG +VAL G VYT G Y +L
Sbjct: 4169 GDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRL 4228
Query: 332 GNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + + P RV G K V IA GS H T EVYTWG G+LG G T
Sbjct: 4229 GHGSYEHVRRPMRVTGMQGKMIV-SIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLA 4287
Query: 391 RNSPSLVEALKDKQVKSI 408
P L+ AL+ + ++
Sbjct: 4288 AQRPRLLMALQVNIIPTL 4305
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 151/305 (49%), Gaps = 29/305 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKA--LESAVVLDVQNIACGGRHAAL 90
G +F GEGT +G LG G + S P+A S V++ + GG+HA
Sbjct: 3109 GKLFACGEGT-NGRLG---------LGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALA 3158
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+V+SWGE G+LGHG + P+LI++L+ + +ACG H+ VT G LY
Sbjct: 3159 LTADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLY 3218
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG++ VPK V L V ++CG T +T+ G++F++G
Sbjct: 3219 TWGLGEY--GRLGHGDDNIQLVPKMVEA-LANYRVIQVACGSRDAQTLALTACGKVFSWG 3275
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G +IP VE L L + CG + A+ G++
Sbjct: 3276 DGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTR------------DGEV 3323
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG GD RLGHG PT V AL VA G +A+T+ V+ G +
Sbjct: 3324 WTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDH 3383
Query: 329 GQLGN 333
GQ GN
Sbjct: 3384 GQQGN 3388
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 140/266 (52%), Gaps = 27/266 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NRV PK + + L+V IACGG H+A +
Sbjct: 4057 GEVYSWGEGE-DGKLGHG-NRVSY--------DRPKLITALSGLEVVCIACGGAHSACLT 4106
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
+G +++WG+ GRLGHG D L PKL++ALS+ + VAC G+ T +T +++
Sbjct: 4107 ARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVW 4166
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P R++ L+G+ V + CG + + G ++T+G G
Sbjct: 4167 SWGDGDY--GKLGRGGSEGCKLPMRIDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKG 4223
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P V ++G V A G H A + +G+++T
Sbjct: 4224 DYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTD------------TGEVYT 4271
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAAL 296
WGD D+G+LG G A P + AL
Sbjct: 4272 WGDNDEGQLGDGTTLAAQRPRLLMAL 4297
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 162/321 (50%), Gaps = 21/321 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+ WG G+LG + V P AL+ +N + GE AVT G +Y G G
Sbjct: 3953 VYGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGA 4012
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTFGV 214
+G + VS + ++ + ++ ++C G H +++ G+++++G+G G
Sbjct: 4013 GGRLGIGGIDSVSQ---PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGK 4069
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LGHG+R S P+ + +L GL V ACG H+A + + G+++TWG G
Sbjct: 4070 LGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLT------------ARGRIYTWGKG 4117
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLG 332
GRLGHGD E +L+P V AL VACG + T+ +T +V++ G YG+LG
Sbjct: 4118 RYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4177
Query: 333 NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
++G KLP R++ L V ++ CGS L VYTWGKG RLGHG +
Sbjct: 4178 RGGSEGCKLPMRIDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHV 4236
Query: 392 NSPSLVEALKDKQVKSIACGT 412
P V ++ K + SIA G+
Sbjct: 4237 RRPMRVTGMQGKMIVSIATGS 4257
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 137/266 (51%), Gaps = 27/266 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGEG DG LG G NR+ P+ +ES V +IACG H+A V
Sbjct: 3163 GKVYSWGEGE-DGKLGHG-NRI--------TLEAPRLIESLAGERVISIACGSAHSACVT 3212
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
+G +++WG GRLGHG D+ L PK+++AL+N + VACG + T A+T G ++
Sbjct: 3213 ARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVF 3272
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G +P V L + V+ + CG + +T G+++T+G G
Sbjct: 3273 SWGDG--DFGKLGRGGSDGCAIPMNVER-LNSLGVTQVECGAQFSLALTRDGEVWTWGKG 3329
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V P VE+L+G R + A G H AV S +++
Sbjct: 3330 DYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVT------------SENQVWA 3377
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAAL 296
WGD D G+ G+G P VA +
Sbjct: 3378 WGDNDHGQQGNGTTCVNRRPALVAGV 3403
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 129/301 (42%), Gaps = 46/301 (15%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L ++ I+ +AC E +T G +YT L + H VP LE
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYT----------LPYDTMTPHLVPG-----LESKT 524
Query: 185 VSSISCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
++ +SC H +S G +++G G G LGHGD + P+ + L VR A
Sbjct: 525 ITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAA 584
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G+ +A + S G L+TWG G +GRLGHG E L P V+ N
Sbjct: 585 GLACSAVIT------------SRGALYTWGRGAQGRLGHGTIENCLTPQPVS-FNAHNIE 631
Query: 303 RV-----ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
R+ G T+ T G V G G+ G P R L+ V +
Sbjct: 632 RIIDVALGWGEGSTLCCTWEGAVQVFGE---GEAGTP--------RALSALAMFRVTRVY 680
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G + A LT +VYTWGKG RLGHG+ + P LVEAL+ ++ ++ G + A
Sbjct: 681 TGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIA 740
Query: 418 I 418
+
Sbjct: 741 L 741
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 117/228 (51%), Gaps = 20/228 (8%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
VT G+++ G G G LG G SVS P + S++ + + AC N
Sbjct: 3999 VTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVAC--------------N 4044
Query: 258 SSSSNC----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
S +C + G++++WG+G+ G+LGHG++ + P + AL +ACG + +
Sbjct: 4045 SGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSAC 4104
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTE 371
LT G +YT G YG+LG+ ++ +L ++ LS V ++ACGS +T
Sbjct: 4105 LTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDN 4164
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
V++WG G G+LG G ++ P ++ LK +V + CG+ F+ A+C
Sbjct: 4165 VWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALC 4212
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 125/290 (43%), Gaps = 32/290 (11%)
Query: 51 LNRVGSCFGVKMDSSLPKALESAVVLDVQNIACG--GRHAALVNKQGEVFSWGEESGGRL 108
L G+ + + D+ P + + ++C GRH + G +SWG GRL
Sbjct: 498 LTHDGAVYTLPYDTMTPHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRL 557
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
GHG + P+ + L++ + VA G + +T G LYTWG G G LGHG
Sbjct: 558 GHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQ--GRLGHGTIE 615
Query: 169 SHWVPKRVN---GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
+ P+ V+ +E I ++ G T T G + FG+G G
Sbjct: 616 NCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGT----------- 664
Query: 226 PREVESLKGLRTVRAACGV-WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
PR + +L R R G WH A G+++TWG GD RLGHG+
Sbjct: 665 PRALSALAMFRVTRVYTGEHWHAALT-------------DGGQVYTWGKGDGYRLGHGNM 711
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
E+ +P V AL ++ G S +AL++ G ++ G+ Q+ NP
Sbjct: 712 ESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNP 761
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 109/250 (43%), Gaps = 24/250 (9%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG V +P +L LR V A G T +V
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGS-KTLFIVS---------- 3106
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHV 320
GKLF G+G GRLG G P L RVA G +ALT G V
Sbjct: 3107 -HDGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKV 3165
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
Y+ G G+LG+ R+ L+ V IACGS H A +T++ +YTWG G
Sbjct: 3166 YSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEY 3225
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN------FTAAICLHKWVSG----VDQS 430
GRLGHGD + + P +VEAL + +V +ACG+ TA + W G + +
Sbjct: 3226 GRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRG 3285
Query: 431 MCSGCRLPFN 440
GC +P N
Sbjct: 3286 GSDGCAIPMN 3295
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 290 PTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGK 347
PT +A++ +VAC G +AL+ G VY+ G G+LG+ ++
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
LS V IACG H A LT++ +YTWGKG GRLGHGD++D+ P LVEAL +V
Sbjct: 4087 LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVID 4146
Query: 408 IACGTNFTAAICL----HKWVSG------VDQSMCSGCRLPFNNFKRKRHNCYNCGLVFC 457
+ACG+ +C+ + W G + + GC+LP R +C V
Sbjct: 4147 VACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPM------RIDCLKGLRVIK 4200
Query: 458 HSCSSKKSL 466
C S+ S+
Sbjct: 4201 VECGSQFSV 4209
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 46/308 (14%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ +Q IAC + A L+ G V++ + D + P L+ L + I V+C
Sbjct: 483 IRIQQIACAEKLALLLTHDGAVYT------------LPYDTMTPHLVPGLESKTITQVSC 530
Query: 136 ---GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G ++ C + G ++WG G G LGHG+ + P+ ++ L V ++ G
Sbjct: 531 HSLGRHYLCRSSCGG-AWSWGIG--EDGRLGHGDTAARDAPQPLHH-LAHHEVVRVAAGL 586
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGVWHTAAV 250
+AV+TS G L+T+G G G LGHG ++ P+ V + R + A G W
Sbjct: 587 ACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALG-W----- 640
Query: 251 VEVMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
G S+ C+ G + +G+G+ G P ++AL RV G
Sbjct: 641 -----GEGSTLCCTWEGAVQVFGEGEAG-----------TPRALSALAMFRVTRVYTGEH 684
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
ALT G VYT G +LG+ + K+P VE L + +++ G+ H L+S
Sbjct: 685 WHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEA-LQGIKIVDLSLGASHGIALSS 743
Query: 369 KTEVYTWG 376
+ ++ WG
Sbjct: 744 EGVLFVWG 751
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 76/156 (48%), Gaps = 17/156 (10%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGS--CFGVKMDSSLPKALESAVVLDVQNIACGGRHA 88
A G VF WG+G G L R GS C ++P +E L V + CG + +
Sbjct: 3267 ACGKVFSWGDGD-----FGKLGRGGSDGC-------AIPMNVERLNSLGVTQVECGAQFS 3314
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ + GEV++WG+ RLGHG D+ V P L++AL + VA G H AVT
Sbjct: 3315 LALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQ 3374
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
++ WGD + G G+G + P V G +EG+
Sbjct: 3375 VWAWGDNDH--GQQGNGTTCVNRRPALVAG-VEGVQ 3407
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 12/155 (7%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
WGEG+ G +V FG + ++ P+AL + + V + G A + G+V
Sbjct: 640 WGEGSTLCCTWEGAVQV---FG-EGEAGTPRALSALAMFRVTRVYTGEHWHAALTDGGQV 695
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
++WG+ G RLGHG PKL++AL + I ++ G H A++ G L+ WG
Sbjct: 696 YTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHER 755
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++S+ VP+ V + +S GP
Sbjct: 756 --------TQISNPVPQPVKAFNPSFKANGVSSGP 782
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 30/362 (8%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEY 138
+ACG H A+++ GE+F+WG S G+LGHG++ P+ ++ + I +++CG
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGE 1096
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H+ AV S +Y+WG Y G LGHG +PK++ G V +I+ G HT V+
Sbjct: 1097 HSVAVDQSFQIYSWGSSRY--GQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVL 1154
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
+G LFTFG G LG G+ K+ ++P +E+ G+ H + + G+S
Sbjct: 1155 KKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIET-------SEIVGI-HGERITAIAAGHS 1206
Query: 259 SSSNC-SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
S C +G +++WG KG+LGHG+ E L P + L +++CGH TVA++
Sbjct: 1207 HSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISEL 1266
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTS------KT 370
VY G + LGN +L P +E ++K +E++ CG YH A +T+ +
Sbjct: 1267 NSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKK-IEKVVCGLYHTATVTAAENGSDRG 1325
Query: 371 EVYTWGKGANGRLGH-GDTD----DRNSPSLVEALKDKQVKSIACGTNFTAAI----CLH 421
VY G G +G+LG GD D+ P+++ +L + + G+ F+A I L+
Sbjct: 1326 NVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALY 1385
Query: 422 KW 423
W
Sbjct: 1386 TW 1387
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 195/391 (49%), Gaps = 45/391 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG + G LG GLN VG S P+ +E+ + I+CGG H+ V+
Sbjct: 1051 GELFTWGNNS-QGQLGHGLN-VGKY------QSTPRRVETFKSSPIIMISCGGEHSVAVD 1102
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS-NMNIELVACGEYHTCAVTLSGDLYT 151
+ +++SWG G+LGHGV + PK I+ + + +A G HT + SGDL+T
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFT 1162
Query: 152 --WGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIH---VSSISCGPWHTAVVTSAGQLF 205
W D G LG GN + VP R+ + GIH +++I+ G H+ + G ++
Sbjct: 1163 FGWNDS----GQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIY 1218
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
++G + G LGHG+ + P++++ LKG ++ +CG +HT A+ E+
Sbjct: 1219 SWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISEL------------ 1266
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS------GH 319
++ WG G+ LG+G + +L P + + +V CG T +T + G+
Sbjct: 1267 NSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGN 1326
Query: 320 VYTMGSPVYGQLG------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
VY G +G+LG P D P + S + V + GS A++T+ +Y
Sbjct: 1327 VYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIV-GFSSGSEFSAIITNNGALY 1385
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
TWG G G++G+G T+D P+ + +L D++
Sbjct: 1386 TWGYGNFGQIGNGKTEDMWLPTKI-SLNDQR 1415
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 179/343 (52%), Gaps = 17/343 (4%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L ++G G D P +L + V D+ +IA H A + +GEV++ G G+L
Sbjct: 10 GDLGQLG--IGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67
Query: 109 G-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G++ V+ P + AL + +ACG HT AVT +G L +WG Y GN
Sbjct: 68 GVRGMEEQVV-PIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNI 126
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
V P+ V G + +H S ++ G +HT +T +G +++FGDG+ G LGHG+ S P
Sbjct: 127 VDGVQPRIVKGSRD-LHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPS 185
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
V+SL GL + ACG H+AA+ GK+FTWG G G+LGHG +
Sbjct: 186 LVKSLWGLGVTQIACGENHSAALT------------VDGKVFTWGRGKYGQLGHGSTQNI 233
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGK 347
+P V ALV+ + ++ACG T+A+T+ G +++ G ++GQ G+ + L + +
Sbjct: 234 KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQ 293
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
L + +++ G+ H VL + EVY WG +LG D D
Sbjct: 294 LEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLGTCDRCD 336
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 158/325 (48%), Gaps = 19/325 (5%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V++ G G+LG G SD P + L +I +A +YHT +T G++YT G+
Sbjct: 4 VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYT--TGS 61
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ G LG VP RV L+ V+ I+CG HT VT G L ++G +G LG
Sbjct: 62 NDAGQLGVRGMEEQVVPIRV-AALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120
Query: 217 HGDRKSVS--IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
V PR V+ + L R A G +HT A+ SG ++++GDG
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALT------------GSGDVYSFGDG 168
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
G LGHG+ + P+ V +L ++ACG + + ALT G V+T G YGQLG+
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228
Query: 335 QADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
KLP V+ + ++ IACG H +TS +++WG G G+ GHG +D S
Sbjct: 229 STQNIKLPVAVKALVDHDVIQ-IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLS 287
Query: 394 PSLVEALKDKQVKSIACGTNFTAAI 418
P V L+ + + ++ G T +
Sbjct: 288 PKQVHQLEGRVLVQVSAGARHTVVL 312
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 192/381 (50%), Gaps = 38/381 (9%)
Query: 60 VKMDSSLPKALE-SAVVLDVQN----IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS 114
++ D P +L +A+ + N +ACGG H V + GEV SWG + G+LG G
Sbjct: 49 LRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAF 108
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D P ++ ALSN + VACG YHT VT G + WG G N G LG G+ S +P+
Sbjct: 109 DQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKG--NSGQLGQGDWTSSLLPR 166
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS----VSIPREVE 230
V+ L + I+CG HT ++ G+++++G G G LG G + V+ P++V
Sbjct: 167 TVS-TLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVR 225
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+ + ACG H A+ + +C +LF+WG G GRLG GD E++ P
Sbjct: 226 VDEEEKFEFIACGSRHCMAITD---------DC---RLFSWGLGADGRLGLGDSESRFSP 273
Query: 291 TCVAALVEP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG--- 346
T V +E C VA G T L+ +G ++T G YGQLG+ AD +L +
Sbjct: 274 TVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQLTLKKARALR 333
Query: 347 ---------KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
+L + + ACG H V+++ EV+ WG +G+LG G T+ NSP +
Sbjct: 334 HGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGGTEGANSPVEL 393
Query: 398 EALKDKQVKSIACGTNFTAAI 418
+L+ V ++CG +AA+
Sbjct: 394 TSLRG-LVGDVSCGLVHSAAV 413
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 169/351 (48%), Gaps = 53/351 (15%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKR--------------------VNGPLEGIHVSSI 188
L WG+ FG LGHG+ +S PKR +NG + +
Sbjct: 26 LQGWGE----FGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAI------YV 75
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+CG HT VT G++ ++G G G LG G+ ++P V++L R ACG +HTA
Sbjct: 76 ACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTA 135
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
V +V G + WG G+ G+LG GD + L+P V+ L ++ACG
Sbjct: 136 VVTDV------------GLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGM 183
Query: 309 SLTVALTTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
+ T+AL+ +G +Y+ G+ GQLG AD P +V + F E IACGS H
Sbjct: 184 AHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKF-EFIACGSRHC 242
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV-EALKDKQVKSIACGTNFTAAICLHK 422
+T +++WG GA+GRLG GD++ R SP++V ++++ ++ +A G + TA + +
Sbjct: 243 MAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNG 302
Query: 423 WV----SGVDQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKAS 469
+ G + G P K+ R + C L+ KK +KA+
Sbjct: 303 EIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAA 353
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 167/349 (47%), Gaps = 39/349 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V WG G +G LG G D ++P +++ V +ACG H A+V
Sbjct: 89 GEVVSWGWGN-EGQLGSG---------NAFDQTVPAVVKALSNHRVCGVACGYYHTAVVT 138
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V WG+ + G+LG G + L P+ + L N I +ACG HT A++++G++Y+W
Sbjct: 139 DVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSW 198
Query: 153 GDGTY-NFGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G G G+ H E + P++V E I+CG H +T +LF++G G
Sbjct: 199 GAGADGQLGVGKHQEETADVATPQKVRVDEEE-KFEFIACGSRHCMAITDDCRLFSWGLG 257
Query: 211 TFGVLGHGDRKSVSIPREV-ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG GD +S P V S++ LR A G HTA + + +G++F
Sbjct: 258 ADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSD------------NGEIF 305
Query: 270 TWGDGDKGRLGHGDKEAKL------------VPTCVAALVEPNFCRVACGHSLTVALTTS 317
T G G G+LGHGD + +L + + L + + ACG + T+ ++T+
Sbjct: 306 TCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTA 365
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
G V+ G+ GQLG +G + VE + V +++CG H A +
Sbjct: 366 GEVFAWGAAEDGQLGTGGTEGA-NSPVELTSLRGLVGDVSCGLVHSAAV 413
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 755 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 811
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 812 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 871
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 872 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 928
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 929 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 976
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 977 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 1036
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 1037 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 1095
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 1096 RPRLVAALQGKKVNRVACGSAHTLA 1120
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 165/326 (50%), Gaps = 44/326 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 863 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 912
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 913 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 972
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 973 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 1029
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 1030 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 1077
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 1078 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 1124
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEI 356
P + GKLP +V + + ++EI
Sbjct: 1125 --KPASAGKLPAQV--PMEYNHLQEI 1146
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G R+G D PK +E+ V +IACG A
Sbjct: 913 AAGDLYTWGKGR--------YGRLG--HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT 962
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 963 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 1022
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 1023 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 1079
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 1080 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 1132
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 21/200 (10%)
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
PR +E+LK R ACG H+AA+ SSG+L+TWG G+ GRLGHGD
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNT 53
Query: 286 AKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPN 342
+L P V L+ +VACG + T+ALT G V++ G +G+LG ++G +P
Sbjct: 54 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 113
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSK-----TEVYTWGKGANGRLGHGDTDDRNSPSLV 397
+E +L+ V +I CG+ LT +VY WG +G+ G+G T P+LV
Sbjct: 114 NIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLV 172
Query: 398 EALKDKQVKSIACGTNFTAA 417
+ L+ +++ +ACG++ + A
Sbjct: 173 QGLEGQKITRVACGSSHSVA 192
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
M+ P+ +E+ +++IACG H+A + GE+++WG GRLGHG ++ L PK+
Sbjct: 1 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 60
Query: 122 IDALSNMNIELVACG--EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ L + VACG + T A+T G +++WGDG +FG LG G +P+ +
Sbjct: 61 VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIER- 117
Query: 180 LEGIHVSSISCGPWHTAVVTSAG-----QLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
L G V I CG + +T +G Q++ +GD G G+G P V+ L+G
Sbjct: 118 LNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEG 177
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSS 259
+ R ACG H+ A V V S
Sbjct: 178 QKITRVACGSSHSVAWTTVDVATPS 202
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
R+ L+ + I+CG H+A +TS+G+L+T+G G +G LGHGD + P+ V+ L G
Sbjct: 7 RLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLG 66
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
R ++ ACG + + G +F+WGDGD G+LG G E +P +
Sbjct: 67 HRVIQVACGSRDAQTL----------ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 116
Query: 295 ALVEPNFCRVACGHSLTVALTTSG-----HVYTMGSPVYGQLGNPQAD-GKLPNRVEGKL 348
L C++ CG ++ALT SG VY G +GQ GN + P V+G L
Sbjct: 117 RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-L 175
Query: 349 SKSFVEEIACGSYHVAVLTS 368
+ +ACGS H T+
Sbjct: 176 EGQKITRVACGSSHSVAWTT 195
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 756 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 810
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 811 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 856
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 857 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 916
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 917 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 976
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 977 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1017
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 806
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 807 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 923
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 924 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 965
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLS 349
P + AL +ACG S + ALT+SG +YT G YG+LG+ +L ++ L
Sbjct: 6 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65
Query: 350 KSFVEEIACGSY--HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
V ++ACGS LT + V++WG G G+LG G ++ N P +E L + V
Sbjct: 66 GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQ 125
Query: 408 IACGTNFTAAI 418
I CG F+ A+
Sbjct: 126 IECGAQFSLAL 136
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P +E L + +IACGS H A LTS E+YTWG G GRLGHGD + P +V+ L
Sbjct: 6 PRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64
Query: 401 KDKQVKSIACGTNFTAAICL 420
+V +ACG+ + L
Sbjct: 65 LGHRVIQVACGSRDAQTLAL 84
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 174/337 (51%), Gaps = 34/337 (10%)
Query: 33 GDVFIWGEGT--GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
GDV++WG G V G+ ++ D LP LES + DV +++ G H A
Sbjct: 768 GDVYLWGRGAVKTPAVPILGIPQIE-------DQLLPFKLES--LSDVVSVSIGFCHGAA 818
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V GE+ +WG G+LGHG ++ + PK+I +L++ I V CGE HT +T +G +Y
Sbjct: 819 VRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVY 878
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG Y G LG G+ H P +V+ LE +V I+ G H AV+T++ ++ FG+G
Sbjct: 879 SWGASEY--GQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G VS+P V SLK L R CG + TAA+ E C G ++T
Sbjct: 936 A----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITE----------C--GDVYT 979
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G + LGHG + P + AL + +++CG T LT SG ++T G +GQ
Sbjct: 980 WGTGQE--LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQ 1037
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACG-SYHVAVL 366
LG D P R+E +F+ ++CG +Y+VA+
Sbjct: 1038 LGQMSGDQNKPKRIESLTKTTFI-SVSCGENYNVALF 1073
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 156/329 (47%), Gaps = 29/329 (8%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV---ACGEYHTCAVTLSGDLYTWG 153
+ +WG S +LG V + + L N NI + + G Y++ +T +GD+Y WG
Sbjct: 715 LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWG 774
Query: 154 DG---TYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLFTFGD 209
G T +LG +P + LE + V S+S G H A V + G+L T+G
Sbjct: 775 RGAVKTPAVPILGIPQIEDQLLPFK----LESLSDVVSVSIGFCHGAAVRANGELLTWGV 830
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LGHGD + P+ ++SL + CG HT + + +GK++
Sbjct: 831 GENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK------------NGKVY 878
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
+WG + G+LG GD P V+AL + N ++A G + LTTS V G+ G
Sbjct: 879 SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN---G 935
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
+ LP V L ++ + CG Y A +T +VYTWG G LGHG
Sbjct: 936 AAMGAASVVSLPTLVPS-LKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNS 992
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
SP L+EAL+++ ++ I+CG TA +
Sbjct: 993 TETSPKLIEALRNQSIRQISCGGRHTAFL 1021
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 175/358 (48%), Gaps = 31/358 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE-----ESGGRLGHGVDSDVLHPKL 121
P+ L + + D+ +I+ G +++++ + G+V+ WG + LG D L P
Sbjct: 740 PERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFK 799
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++LS+ + V+ G H AV +G+L TWG G G LGHG+ + PK + L
Sbjct: 800 LESLSD--VVSVSIGFCHGAAVRANGELLTWGVGEN--GQLGHGDTNNQIEPKIIQS-LT 854
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
++ + CG HT +T G+++++G +G LG GD S P +V +L+ ++ A
Sbjct: 855 SFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIA 914
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G H A + +S ++ +G+G G +PT V +L +
Sbjct: 915 SGSTHCAVL------------TTSKEVLVFGNG----AAMGAASVVSLPTLVPSLKYLHI 958
Query: 302 CRVACGHSLTVALTTSGHVYTMGS-PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
R+ CGH T A+T G VYT G+ G GN P +E ++S + +I+CG
Sbjct: 959 DRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTETS--PKLIEALRNQS-IRQISCGG 1015
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H A LT ++T GK + G+LG + D+N P +E+L S++CG N+ A+
Sbjct: 1016 RHTAFLTDSGRIFTCGKDSFGQLGQM-SGDQNKPKRIESLTKTTFISVSCGENYNVAL 1072
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 265 SGKLFTWGDGDKGR-----LGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+G ++ WG G LG E +L+P + +L + V+ G A+ +G
Sbjct: 767 NGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD--VVSVSIGFCHGAAVRANGE 824
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+ T G GQLG+ + ++ ++ L+ ++ ++ CG H LT +VY+WG
Sbjct: 825 LLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASE 884
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
G+LG GD +SP V AL+ V IA G+ A + K V
Sbjct: 885 YGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEV 929
>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 388
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 204/401 (50%), Gaps = 48/401 (11%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT +G LG + D P+ L + + ++ACGG H +
Sbjct: 20 VWSWGAGT-EGQLG---------TKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSA 69
Query: 95 GEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+ SWG + G+LGHG V S+ L+PK + +L I V+ G H+ V+ +G ++T G
Sbjct: 70 GKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
DG+ FG LGHG+ SH P +V+ ++ +HV+ ++CG H+ V+ Q++ FG G G
Sbjct: 130 DGS--FGQLGHGDNASHCSPVKVSCFVD-LHVAQVACGMRHSLVLLKGNQVYGFGSGKRG 186
Query: 214 VLG-HGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG DR KSV++P+ V +G+ V A H+AAV G ++TW
Sbjct: 187 QLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAV------------SVDGHVYTW 234
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G KG E VP C+ + + NF +VA G + +A++ G VY +G G L
Sbjct: 235 GRGFKGF------EDAHVPQCLNSSL--NFTKVALGWNHALAMSGEGEVYMLGGNHLGVL 286
Query: 332 GNPQADG---KLPNRVEGKLSK------SFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+ Q G P+ E L K + + +IA G+ H ++T E+ TWG G +G+
Sbjct: 287 SDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQ 346
Query: 383 LGHGDTDDRNSP---SLVEALKDKQVKSIACGTNFTAAICL 420
LG GDT D+ SP SL L + + CG+ FT A+ +
Sbjct: 347 LGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVTM 387
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
N + S ++++WG G +G+LG + + P + + +ACG + +ALT+
Sbjct: 9 NEDDRDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTS 68
Query: 317 SGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
+G + G GQLG+ + L + L F+ ++ G H ++ V+T
Sbjct: 69 AGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTC 128
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
G G+ G+LGHGD SP V D V +ACG
Sbjct: 129 GDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACG 164
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 132/341 (38%), Gaps = 82/341 (24%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G WG G G LG G V ++ PKA+ S + +++ G H+ V+
Sbjct: 70 GKALSWGRGN-SGQLGHGE--------VVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVS 120
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF+ G+ S G+LGHG ++ P + ++++ VACG H+ + +Y +
Sbjct: 121 DTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGF 180
Query: 153 GDGTYNFGLLGHGNE--VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G G G LG N+ S VPK V+G EG+ + + H+A V+ G ++T+G G
Sbjct: 181 GSGKR--GQLGVSNDRVKSVNVPKVVSG-FEGVEIVGTAANGDHSAAVSVDGHVYTWGRG 237
Query: 211 TFG-------------------VLGHGDRKSVSIPREVESL------------------- 232
G LG ++S EV L
Sbjct: 238 FKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKH 297
Query: 233 ---------------KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
G + A G H+ V E G++ TWG G+ G
Sbjct: 298 FPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTE------------HGEIKTWGWGEHG 345
Query: 278 RLGHGDKEAKLVPTCVAA---LVEPNFCRVACGHSLTVALT 315
+LG GD + P V+ L E RV CG T A+T
Sbjct: 346 QLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVT 386
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3697 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 3753
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3754 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3813
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3814 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 3870
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R V ACG + + C +++WGD
Sbjct: 3871 GHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 3918
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 3919 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 3978
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 3979 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4037
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4038 RPRLVAALQGKKVNRVACGSAHTLA 4062
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3805 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 3854
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 3855 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 3914
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 3915 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3971
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 3972 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4019
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4020 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4066
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4067 --KPASAGKLPAQV 4078
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/348 (32%), Positives = 172/348 (49%), Gaps = 45/348 (12%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
+ +A G AA + + VFSWG +LG + + P + LS +N+ VA G
Sbjct: 2696 KRMAAGLESAATIRTK--VFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSK 2753
Query: 139 HTCAVTLSGDLYTWGDGT----YNFGL------LGHG--NEVSHWVPKRVNGPLEGIHVS 186
AVT+ G +Y G+ T + G+ + HG +S +V K+V
Sbjct: 2754 SLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKV---------- 2803
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++ G T G++F++G+G G LGH R +PR +E+LK R ACG H
Sbjct: 2804 AVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGSSH 2859
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+AA+ SSG+L+TWG G+ GRLGHGD +L P V L+ +VAC
Sbjct: 2860 SAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2907
Query: 307 G--HSLTVALTTSGHVYTMGSPVYGQLG-NPQADG-KLPNRVEGKLSKSFVEEIACGSYH 362
G + T+ALT G V+++G ++G P+ G +P +E +L+ V +I CG+
Sbjct: 2908 GSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIE-RLNGQGVCQIECGAQF 2966
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
LT V+TWGKG RLGHG P +VE L+ K++ + +C
Sbjct: 2967 SLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSC 3014
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 192/391 (49%), Gaps = 36/391 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF WG D LGG N+ +P E+ L+V +A G + V +
Sbjct: 2712 VFSWGLNDKDQ-LGGLKNK---------KIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761
Query: 95 GEVFSWGEESG-GRLGHGVDS-DVLHPK-LIDALSNMNIELVAC--GEYHTCAVTLSGDL 149
G+V++ GE + G G+ S V P I ALS+ ++ VA G T + G +
Sbjct: 2762 GKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKV 2821
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WG+G + G LGH + + P+ + L+ + I+CG H+A +TS+G+L+T+G
Sbjct: 2822 FSWGEG--DDGKLGHFSRM----PRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2874
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G +G LGHGD + P+ V+ L G R ++ ACG + + G +F
Sbjct: 2875 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVF 2924
Query: 270 TWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ GDGD ++G G E K +P + L C++ CG ++ALT SG V+T G
Sbjct: 2925 SLGDGDLWKIGPG-PEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGD 2983
Query: 328 YGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
Y +LG+ + P VEG K V G+ H +T +VY WG +G+ G+G
Sbjct: 2984 YFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNG 3043
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T P+LV+ L+ +++ +ACG++ + A
Sbjct: 3044 TTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 152/305 (49%), Gaps = 35/305 (11%)
Query: 16 AVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
AV S + +G D G VF WGEG DG LG S +P+ +E+
Sbjct: 2804 AVHSGTSQTGFXPVD--GKVFSWGEG-DDGKLGHF-------------SRMPRLIEALKT 2847
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+++IACG H+A + GE+++WG GRLGHG ++ L PK++ L + VAC
Sbjct: 2848 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2907
Query: 136 G--EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGP 192
G + T A+T G +++ GDG + +G G EV +P+ + L G V I CG
Sbjct: 2908 GSRDAQTLALTDEGLVFSLGDG--DLWKIGPGPEVKGCNIPQNIER-LNGQGVCQIECGA 2964
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC-GVWHTAAVV 251
+ +T +G ++T+G G + LGHG V P+ VE L+G + V +C G H AV
Sbjct: 2965 QFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVT 3024
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ SG+++ WGD D G+ G+G PT V L RVACG S +
Sbjct: 3025 D------------SGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3072
Query: 312 VALTT 316
VA TT
Sbjct: 3073 VAWTT 3077
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 3855 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVVDIACGSGDAQT 3904
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 3905 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 3964
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 3965 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4021
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4022 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4074
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 3698 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 3752
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3753 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3798
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3799 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 3858
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 3859 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 3918
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 3919 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3959
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 3698 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 3748
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3749 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3865
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 3866 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3907
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
GK+F+WG+GD G+LGH + +P + AL +ACG S + ALT+SG +YT G
Sbjct: 2819 GKVFSWGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGL 2874
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWGKGANGRL 383
YG+LG+ +L ++ L V ++ACGS LT + V++ G G ++
Sbjct: 2875 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKI 2934
Query: 384 GHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G + N P +E L + V I CG F+ A+
Sbjct: 2935 GPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLAL 2970
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 93/230 (40%), Gaps = 57/230 (24%)
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRV 304
++ ++ + M S+ K+F+WG DK +LG G K K+ VP+ L N +V
Sbjct: 2690 NSGSLAKRMAAGLESAATIRTKVFSWGLNDKDQLG-GLKNKKIKVPSFSETLSALNVVQV 2748
Query: 305 ACGHSLTVALTTSGHVYTMGS----PVYG------------------------------- 329
A G A+T G VY G P +G
Sbjct: 2749 AGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSG 2808
Query: 330 --QLGNPQADGK-----------------LPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
Q G DGK +P +E L + +IACGS H A LTS
Sbjct: 2809 TSQTGFXPVDGKVFSWGEGDDGKLGHFSRMPRLIEA-LKTKRIRDIACGSSHSAALTSSG 2867
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 2868 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2917
>gi|255080574|ref|XP_002503867.1| predicted protein [Micromonas sp. RCC299]
gi|226519134|gb|ACO65125.1| predicted protein [Micromonas sp. RCC299]
Length = 1066
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 206/426 (48%), Gaps = 53/426 (12%)
Query: 34 DVFIWGE------------GTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
++F+WG G D G VG G + S+P A LDV +
Sbjct: 214 ELFLWGRMPSEFEPPPIDVGDPDAAAG-----VGPAVGGWREWSVPARAPGADGLDVVAV 268
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL-HPKLIDALSN----------MNI 130
A G RHA V + V++WG+ +GGRLG GVD P + +S I
Sbjct: 269 ALGARHAVAVVRHQGVYTWGDGAGGRLGRGVDQRGRGRPSKLSVVSGGEVSDRGAGFERI 328
Query: 131 ELVACGEYHTCAVTL-SGDLYTWGDGTYN-FGLLGHGNEVSHWV-----PKRVN-GPLEG 182
V+CG +T AV G Y WGD + G LG + V P +V+ G G
Sbjct: 329 REVSCGGQYTVAVNYGDGAAYAWGDASGGCHGALGMASPSKGIVAGVSLPTKVSVGFPVG 388
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRKSVSIPREVESL--KGLRTVR 239
VS +SCG +H A VT+AG LF +G+G F LGH GD+ + PR V L G R
Sbjct: 389 TRVSRVSCGAFHAAAVTAAGDLFCWGEGAFHALGHDGDKSTCQHPRRVRGLWDAGRRVSN 448
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK----LVPTCVAA 295
+CGV+HTAAV + +++ G+L+TWGD D G+LGHG + AK + P V+
Sbjct: 449 VSCGVYHTAAVA---IDRTTTGCAGRGELWTWGDADGGKLGHGAEAAKEKAVVAPRRVSG 505
Query: 296 LVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE 354
L E + V+CG T+A G V+ GS G++ P P RV G E
Sbjct: 506 LDENADVTTVSCGQWHTLAACADGVVWVCGS--VGKVA-PAEPALTPERVPG--IPGGAE 560
Query: 355 EIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
IA G +H VA+ ++++WG+G G LGH D ++P VEAL ++V +ACG
Sbjct: 561 AIASGEWHAVAIGRGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHVACGPE 620
Query: 414 FTAAIC 419
TAA+
Sbjct: 621 STAAVV 626
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 33 GDVFIWGEGTG--DGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
G + WG+ +G G LG G GV + + + ++ V V ++CG HAA
Sbjct: 346 GAAYAWGDASGGCHGALGMASPSKGIVAGVSLPTKV--SVGFPVGTRVSRVSCGAFHAAA 403
Query: 91 VNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDAL--SNMNIELVACGEYHTCAVTLS- 146
V G++F WGE + LGH G S HP+ + L + + V+CG YHT AV +
Sbjct: 404 VTAAGDLFCWGEGAFHALGHDGDKSTCQHPRRVRGLWDAGRRVSNVSCGVYHTAAVAIDR 463
Query: 147 --------GDLYTWGDGTYNFGLLGHGNEVSHW----VPKRVNGPLEGIHVSSISCGPWH 194
G+L+TWGD + G LGHG E + P+RV+G E V+++SCG WH
Sbjct: 464 TTTGCAGRGELWTWGDA--DGGKLGHGAEAAKEKAVVAPRRVSGLDENADVTTVSCGQWH 521
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
T + G ++ G + G + + P V + G A G WH V
Sbjct: 522 TLAACADGVVWVCG--SVGKVAPAE--PALTPERVPGIPGGAEA-IASGEWHA-----VA 571
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+G K+F+WG G +G LGH + P V AL VACG T A+
Sbjct: 572 IGRGGE------KMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHVACGPESTAAV 625
Query: 315 TTS 317
+S
Sbjct: 626 VSS 628
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG- 282
S+P GL V A G H AVV ++TWGDG GRLG G
Sbjct: 252 SVPARAPGADGLDVVAVALGARHAVAVVRHQ------------GVYTWGDGAGGRLGRGV 299
Query: 283 DKEAKLVPTCVAALVE-------PNFCR---VACGHSLTVALTT-SGHVYTMGSP---VY 328
D+ + P+ ++ + F R V+CG TVA+ G Y G +
Sbjct: 300 DQRGRGRPSKLSVVSGGEVSDRGAGFERIREVSCGGQYTVAVNYGDGAAYAWGDASGGCH 359
Query: 329 GQLG--NPQ----ADGKLPNRVE-GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G LG +P A LP +V G + V ++CG++H A +T+ +++ WG+GA
Sbjct: 360 GALGMASPSKGIVAGVSLPTKVSVGFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGAFH 419
Query: 382 RLGH-GDTDDRNSPSLVEALKD--KQVKSIACGTNFTAAICLHKWVSG 426
LGH GD P V L D ++V +++CG TAA+ + + +G
Sbjct: 420 ALGHDGDKSTCQHPRRVRGLWDAGRRVSNVSCGVYHTAAVAIDRTTTG 467
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 299 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 355
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 356 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 415
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 416 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 472
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 473 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 520
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 521 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 580
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 581 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 639
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 640 RPRLVAALQGKKVNRVACGSAHTLA 664
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 407 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 456
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 457 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 516
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 517 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 573
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 574 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 621
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 622 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 668
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 669 --KPASAGKLPAQV 680
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 121/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E+ V +IACG A
Sbjct: 457 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEALQGHRVIDIACGSGDAQT 506
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 507 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 566
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 567 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 623
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 624 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 676
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 300 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 354
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 355 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 400
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 401 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 460
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 461 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 520
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 521 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 561
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 300 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 350
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 351 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 407
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 408 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 467
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 468 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 509
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 195/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 2169 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 2225
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ ++ VA G H A++ G++Y+WG+
Sbjct: 2226 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEA 2285
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V I+ G H+A +T AG L+++G G +G L
Sbjct: 2286 --EDGKLGHGNRSPCDRP-RVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRL 2342
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GHGD + P+ VE+L+G R + ACG + + C +++WGD
Sbjct: 2343 GHGDSEDQLKPKLVEALQGYRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 2390
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 2391 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 2450
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 2451 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 2509
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K++ +ACG+ T A
Sbjct: 2510 RPRLVAALQGKKINRVACGSAHTLA 2534
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 193/383 (50%), Gaps = 44/383 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V+ +SD L P+L+ L+
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYV----------QAYNSDTLGPQLVQGLA 196
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI VA +H A+ +G++++WG G + G LGHG+ V PK ++ G
Sbjct: 197 SRNIVKVAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 254
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + +
Sbjct: 255 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 314
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 315 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 362
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG ++ALT G VY+ G +LG+ + + P +EG K V+ +A
Sbjct: 363 DIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD-VAA 421
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACGTNFTA 416
GS H LT +EV++WG +N + H DT + PS + L K + IACG +
Sbjct: 422 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSF 479
Query: 417 AICLHKWVSGVDQSMCSGCRLPF 439
A W S + S+ G R+PF
Sbjct: 480 A-----WSSCSEWSI--GLRVPF 495
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 204/414 (49%), Gaps = 54/414 (13%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 1151 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 1200
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALSN ++ VA G H A+T+ G +++
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1260
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 1261 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 1317
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 1318 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 1367
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
GDGD G+LG G E VP + L C++ CG ++ALT SG V+T G +G+L
Sbjct: 1368 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427
Query: 332 ---------GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL---------------- 366
GN ++ N+ + F ++ ++
Sbjct: 1428 RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQG 1487
Query: 367 ---TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ EVY WG +G+ G+G T P+LV+ L+ +++ +ACG++ + A
Sbjct: 1488 ERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1541
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V +IA GG H+A +
Sbjct: 2277 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVVESLRGIEVVDIAAGGAHSACIT 2326
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G+++SWG+ GRLGHG D L PKL++AL + +ACG + T +T ++
Sbjct: 2327 VAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 2386
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 2387 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 2443
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 2444 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 2491
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 2492 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 2538
Query: 331 LGNPQADGKLPNRV 344
P GKLP +V
Sbjct: 2539 --KPANAGKLPTQV 2550
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +Y
Sbjct: 129 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYV---Q 180
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN LG P+ V G + V++ S G H + + G++F++G G G
Sbjct: 181 AYNSDTLG---------PQLVQGLASRNIVKVAAHSDGH-HYLALAATGEVFSWGCGDGG 230
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + +L G + V ACG ++AA+ + G+L+
Sbjct: 231 RLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 278
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P V L V+CG + T+A+T +G V++ G
Sbjct: 279 TWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD 338
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL + ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 339 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 397
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 398 TEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSW 438
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 158/321 (49%), Gaps = 42/321 (13%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 1134 IRKKASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 1191
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHV 185
AVT+ G +Y G+ T G LG G +S++V K+V
Sbjct: 1192 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPLPRQITALSNYVVKKV--------- 1240
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++ G H +T G++F++G+G G LGH R + PR +E+LK R ACG
Sbjct: 1241 -AVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSS 1299
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+AA+ SSG+L+TWG G+ GRLGHGD +L P V L+ +VA
Sbjct: 1300 HSAAIT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVA 1347
Query: 306 CG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYH 362
CG + T+ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+
Sbjct: 1348 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQF 1406
Query: 363 VAVLTSKTEVYTWGKGANGRL 383
LT V+TWG+G G L
Sbjct: 1407 SLALTKSGVVWTWGRGDFGEL 1427
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 168/373 (45%), Gaps = 66/373 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC--GGRHAAL 90
G V+ GE T +G LG G++ G+ LP+ + + V+ +A GGRHA
Sbjct: 1201 GKVYACGEAT-NGRLGLGISS-GTV-------PLPRQITALSNYVVKKVAVHSGGRHAMA 1251
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LY
Sbjct: 1252 LTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELY 1311
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFG 208
TWG G Y G LGHG+ + PK V L G V ++CG T +T G +F++G
Sbjct: 1312 TWGLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 1368
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
DG FG LG G + ++P+ +E L G + CG + A+ + SG +
Sbjct: 1369 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVV 1416
Query: 269 FTWGDGDKG----------------RLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
+TWG GD G R+ +K A L+P LV P G +
Sbjct: 1417 WTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPR----EMGWEIVG 1472
Query: 313 ALTTSG----------------HVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEE 355
SG VY G +GQ GN + P V+G L +
Sbjct: 1473 IERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITR 1531
Query: 356 IACGSYHVAVLTS 368
+ACGS H T+
Sbjct: 1532 VACGSSHSVAWTT 1544
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 23/299 (7%)
Query: 17 VSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL 76
V++ S G + A G+VF WG G G G LG G KM S+L V+
Sbjct: 203 VAAHSDGHHYLALAATGEVFSWGCGDG-GRLGHG--DTVPLEEPKMISALSGKQAGKHVV 259
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC- 135
+IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V+C
Sbjct: 260 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 316
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ T AVT +G +++WGDG Y G LG G PK + L+ + + + CG
Sbjct: 317 SGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 373
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ +T GQ++++G G LGHG + V P+ +E L+G + V A G H A+ E
Sbjct: 374 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE-- 431
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
++ +WG D+ + + K P+ + L + +ACG + + A
Sbjct: 432 ----------DSEVHSWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSFA 480
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 135/282 (47%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 1144 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 1198
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G+++ G+ T G LG G +V +PR++ +L + A H+ G
Sbjct: 1199 VEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAV---HSG-------GRH 1248
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+ + GK+F+WG+GD G+LGH + P + AL +ACG S + A+T+SG
Sbjct: 1249 AMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 1308
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+YT G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 1309 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 1368
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 1369 DGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 1410
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 2170 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 2224
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 2225 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAV--------------NSGGKHC 2270
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P V +L +A G + + +T +G
Sbjct: 2271 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGD 2330
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+Y+ G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 2331 LYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGD 2390
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 2391 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2431
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 2170 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 2220
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 2221 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 2277
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V +IA G H A +T ++Y+WGKG
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKG 2337
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 2338 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 2379
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 1150 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 1199
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G +ALT G
Sbjct: 1200 --EGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGK 1257
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A +TS E+YTWG G
Sbjct: 1258 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLG 1316
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 1317 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 1358
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 196/446 (43%), Gaps = 79/446 (17%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKAL---ESAVVLDVQNIACGGRHAAL 90
++F WG G G LG FG + D P+ L + ++ IACG H+
Sbjct: 309 ELFSWGSGQY-GALG---------FGTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMC 358
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ ++ ++ +WG+ GGRLGHG + DVL PK I LS ++ GE H+ A++ +LY
Sbjct: 359 LTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLY 418
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
TWG GTY G LGHG + S PK + L+ + +SCG +HT +T G ++ FG G
Sbjct: 419 TWGTGTY--GRLGHGMDTSEKKPKLIE-DLDQYEIIHVSCGAFHTLAITGQGTVYAFGQG 475
Query: 211 TFGVLGHGDRKS---VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+G LG ++ S P ++ K + A++ N S SGK
Sbjct: 476 KYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGK 535
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAAL---------------------VEPNF----C 302
+++WG KG LG + +P + + E F
Sbjct: 536 IYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVI 595
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG------------------------ 338
+VACG TV+LT G VY GS YGQL +
Sbjct: 596 QVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDNSQALDSSE 655
Query: 339 -----KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
K P +++ IACG H+ ++ E++ WG+ G+LG G D +
Sbjct: 656 QMSLIKFPGETTVRINY-----IACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTA 710
Query: 394 -PSLVEALKDKQVKSIACGTNFTAAI 418
P+L+ + K ++ IACG N++AA+
Sbjct: 711 EPTLIRQIAHKNIQMIACGDNYSAAV 736
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 158/350 (45%), Gaps = 58/350 (16%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK-LIDALSNMN--IELVA 134
+ +ACG H + + E+FSWG G LG G D+ P+ LI + IE +A
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIA 350
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
CG+YH+ +T + TWG G G LGHG+E VPK + L IS G H
Sbjct: 351 CGKYHSMCLTRKKKILTWGQG--QGGRLGHGDEDDVLVPKEIY-DLSKKKPIFISAGESH 407
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+A ++ L+T+G GT+G LGHG S P+ +E L + +CG +HT A+
Sbjct: 408 SAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAIT--- 464
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAAL---VEPNFCRV---- 304
G ++ +G G G+LG K+ + V P ++ VEP V
Sbjct: 465 ---------GQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKN 515
Query: 305 -----ACGHSLTVALTTSGHVYTMGSPVYGQLGN--------PQADGKLPNRVEGKL--- 348
A G++ ++ L SG +Y+ G G LG P G++P + GK+
Sbjct: 516 EAILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNI 575
Query: 349 -----------SKSF---VEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
++F V ++ACG + LT+ EVY +G A G+L
Sbjct: 576 DELIQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLA 625
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 154/343 (44%), Gaps = 34/343 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL-HPKLIDALSNMNIELVACG 136
+ IACGG H +++ E+F WG G+LG G SD P LI +++ NI+++ACG
Sbjct: 670 INYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIACG 729
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ ++ AV+ G+L+ G+ G LG G + + S++CGP H
Sbjct: 730 DNYSAAVSAFGELFVTGN--LENGKLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHML 787
Query: 197 VVTSA--------GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+ G +++G G LG G ++ ++P+++ + K R + ACG
Sbjct: 788 AIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKE-RFKKVACG---QD 843
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
+ + GN +++ WG+ K+ +P + AL + +AC +
Sbjct: 844 FSIGLTYGN---------QVYLWGNNKYFCDSKITKDVD-IPQLLQALEQAQIKDIACSY 893
Query: 309 SLTVALTTSGHVYTMGSPVYGQL-GNPQADGKLPN-----RVEGKLSKSFVEEIACGSYH 362
L G + GS + ++ N + D K N + + +E I+ G H
Sbjct: 894 KFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNH 953
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNS---PSLVEALKD 402
A ++ K +YTWG GRLG + + +N+ P LV+++ D
Sbjct: 954 SAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHD 996
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 17/216 (7%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P + P ++ ++CG H +T +LF++G G +G LG G R + PR +
Sbjct: 279 PTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIE 338
Query: 233 KGLRTVRA---ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
K T ACG +H+ + K+ TWG G GRLGHGD++ LV
Sbjct: 339 KKDYTYFIEGIACGKYHSMCLTR------------KKKILTWGQGQGGRLGHGDEDDVLV 386
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKL 348
P + L + ++ G S + A++ ++YT G+ YG+LG+ K P +E L
Sbjct: 387 PKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIED-L 445
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+ + ++CG++H +T + VY +G+G G+LG
Sbjct: 446 DQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLG 481
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 160/388 (41%), Gaps = 43/388 (11%)
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP----------- 119
E +V +ACG + + GEV+ +G + G+L D
Sbjct: 587 EETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNND 646
Query: 120 --KLIDALSNMN-----------IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
+ +D+ M+ I +ACG H A++ +L+ WG + G LG G
Sbjct: 647 NSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRN--DEGQLGLGF 704
Query: 167 EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
+ + ++ I+CG ++A V++ G+LF G+ G LG G
Sbjct: 705 VSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFL 764
Query: 227 REVESLKGLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
++ L +++ ACG H A+ + + G ++WG KG+LG G KE
Sbjct: 765 LSFTLIQNLAPIKSVACGPNHMLAIADY----NPDHPIKDGMCYSWGRNWKGQLGIGSKE 820
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE 345
VP + E F +VACG ++ LT VY G+ Y D +P ++
Sbjct: 821 DSNVPKKIHNAKE-RFKKVACGQDFSIGLTYGNQVYLWGNNKYFCDSKITKDVDIPQLLQ 879
Query: 346 GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---- 401
L ++ +++IAC +VL K E+ WG R+ D+ S + + K
Sbjct: 880 A-LEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMR 938
Query: 402 --DKQVKSIACGTNFTAAI----CLHKW 423
D +++I+ G N +AA+ L+ W
Sbjct: 939 KFDFLMETISAGQNHSAAVSVKRSLYTW 966
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/467 (22%), Positives = 190/467 (40%), Gaps = 97/467 (20%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+ WG+G G G LG G + D +PK + I+ G H+A ++++
Sbjct: 365 ILTWGQGQG-GRLG---------HGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEK 414
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+++WG + GRLGHG+D+ PKLI+ L I V+CG +HT A+T G +Y +G
Sbjct: 415 LNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQ 474
Query: 155 GTYNFGLLGHGNEVSHWV---PKRVNGPLEGIHVSSI-----------SCGPWHTAVVTS 200
G Y G LG + V P++++ G+ + + G H+ +
Sbjct: 475 GKY--GKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAK 532
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG-------------------------L 235
+G+++++G G+LG +P E+ + G
Sbjct: 533 SGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSY 592
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------------- 281
++ ACGV +T ++ + G+++ +G G+L
Sbjct: 593 EVIQVACGVLNTVSLT------------NGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQD 640
Query: 282 ------------GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
++ L+ V N+ +ACG A++ ++ G G
Sbjct: 641 QNNNNDNSQALDSSEQMSLIKFPGETTVRINY--IACGGEHIFAISRMNELFGWGRNDEG 698
Query: 330 QLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG +D + +++ ++ IACG + A +++ E++ G NG+LG G
Sbjct: 699 QLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQA 758
Query: 389 DDRN---SPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
+ S +L++ L +KS+ACG N AI + + MC
Sbjct: 759 LKKGFLLSFTLIQNLAP--IKSVACGPNHMLAIADYNPDHPIKDGMC 803
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 223 VSIPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
VS P ++ K + + + ACG H A+ E +LF+WG G G LG
Sbjct: 276 VSRPTAIKFPKHTKPITQVACGSAHILAITE------------DSELFSWGSGQYGALGF 323
Query: 282 GDKEAKLVPTCVAALVEPN----FCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
G ++ P + ++E F +ACG ++ LT + T G G+LG+
Sbjct: 324 GTRDDIFEPRHL--IIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDE 381
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSL 396
D L + LSK I+ G H A ++ K +YTWG G GRLGHG P L
Sbjct: 382 DDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKL 441
Query: 397 VEALKDKQVKSIACGTNFTAAI 418
+E L ++ ++CG T AI
Sbjct: 442 IEDLDQYEIIHVSCGAFHTLAI 463
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 154/378 (40%), Gaps = 62/378 (16%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
+ ++F WG +G LG G V ++ P + ++Q IACG ++A V
Sbjct: 686 MNELFGWGR-NDEGQLGLGF--------VSDFTAEPTLIRQIAHKNIQMIACGDNYSAAV 736
Query: 92 NKQGEVFSWGEESGGRLGHGVDSD---VLHPKLIDALSNMNIELVACGEYHTCAV----- 143
+ GE+F G G+LG G +L LI L+ I+ VACG H A+
Sbjct: 737 SAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLA--PIKSVACGPNHMLAIADYNP 794
Query: 144 ---TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
G Y+WG G LG G++ VPK+++ E ++CG + +T
Sbjct: 795 DHPIKDGMCYSWGRNWK--GQLGIGSKEDSNVPKKIHNAKE--RFKKVACGQDFSIGLTY 850
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
Q++ +G+ + K V IP+ +++L+ + AC + + +
Sbjct: 851 GNQVYLWGNNKY-FCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLND-------- 901
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP----NFCR--VACGHSLTVAL 314
G++ WG R+ K+ K +A P +F ++ G + + A+
Sbjct: 902 ----KGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAV 957
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
+ +YT G G+LG N E K +K +E I S H ++ +
Sbjct: 958 SVKRSLYTWGHAEGGRLG--------LNEKEYKNAK--IEPILVQSIH-DIMQKNRQNLK 1006
Query: 375 WGKGANGRLGHGDTDDRN 392
G+GA GD + +N
Sbjct: 1007 EGRGA------GDEEIKN 1018
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G F G G+ V G N+ + D +P+ L++ +++IAC + ++
Sbjct: 839 ACGQDFSIGLTYGNQVYLWGNNKYFCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSV 898
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSD------VLHPKLIDALSNMNIELVACGEYHTCAVT 144
+N +GE+ WG R+ D + K + +E ++ G+ H+ AV+
Sbjct: 899 LNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFLMETISAGQNHSAAVS 958
Query: 145 LSGDLYTWG 153
+ LYTWG
Sbjct: 959 VKRSLYTWG 967
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 194/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 3841 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKL 3897
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 3898 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 3957
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 3958 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 4014
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGD 273
GH D + P+ VE L+G R V ACG + + C +++WGD
Sbjct: 4015 GHSDSEDQLKPKLVEVLQGHRVVDIACG------------SGDAQTLCLTDDDTVWSWGD 4062
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 4063 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 4122
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 4123 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4181
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 4182 RPRLVAALQGKKVNRVACGSAHTLA 4206
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 158/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 3949 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 3998
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++ L + +ACG + T +T ++
Sbjct: 3999 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVW 4058
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4059 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4115
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 4116 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4163
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 4164 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 4210
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 4211 --KPASAGKLPAQV 4222
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 477 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 164/308 (53%), Gaps = 32/308 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 2962 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHGD + P+ V+ L G R ++ ACG + + G +F+W
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSW 3178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT-----MGSP 326
GDGD G+LG G E +P + L C++ CG ++ALT SG V+T + SP
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWYVSFLLSP 3238
Query: 327 VYGQLGNP 334
V+ LG P
Sbjct: 3239 VH-LLGVP 3245
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 154/304 (50%), Gaps = 24/304 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 2945 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 3002
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 3003 KSLFAVTVEGKVYACGEATN--GRLGLGLSSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 3059
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 3116
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 3117 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 3167
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 3226
Query: 372 VYTW 375
V+TW
Sbjct: 3227 VWTW 3230
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 125/241 (51%), Gaps = 24/241 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG GL S V + + AL S VV V + GGRHA +
Sbjct: 3012 GKVYACGEAT-NGRLGLGL----SSGTVPIPRQI-TALSSYVVKKVA-VHSGGRHATALT 3064
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3125 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3229
Query: 271 W 271
W
Sbjct: 3230 W 3230
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 143/308 (46%), Gaps = 49/308 (15%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD 77
+ H DG A G+V+ WG G G G LG G +LP LE V+
Sbjct: 500 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHG-------------DTLP--LEEPKVIS 543
Query: 78 ----------VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L
Sbjct: 544 AFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG 603
Query: 128 MNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+ + VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDV 660
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+ CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G
Sbjct: 661 IKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGST 720
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H A+ E ++ +WG D+ + + K PT + L + +A
Sbjct: 721 HCLALTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIA 768
Query: 306 CGHSLTVA 313
CG + + A
Sbjct: 769 CGPAQSFA 776
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 3009
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G+++ G+ T G LG G +V IPR++ +L + A H+ G
Sbjct: 3010 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAV---HSG-------GRH 3059
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+++ GK+F+WG+GD G+LGH + P + AL +ACG S + ALT+SG
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+YT G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 3179
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 3180 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/240 (35%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G G LG + D PK +E V +IACG A
Sbjct: 3999 AAGDLYTWGKGRY-GRLGHSDSE---------DQLKPKLVEVLQGHRVVDIACGSGDAQT 4048
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 4049 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 4108
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 4109 VYTWGKGDYHR--LGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 4165
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 4166 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 4218
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L I + G VT+ G+
Sbjct: 3842 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPIQLIG---GEQTLFAVTADGK 3896
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 3897 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 3942
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 3943 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4002
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 4003 LYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 4062
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 4063 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4103
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 108/222 (48%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR ++ G AV
Sbjct: 3842 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVT--------- 3892
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 3893 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3949
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4009
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVE L+ +V IACG+ +CL
Sbjct: 4010 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCL 4051
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 2961 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 3010
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 3011 --EGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 3068
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 3069 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 3127
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 3128 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/350 (33%), Positives = 178/350 (50%), Gaps = 35/350 (10%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GE 137
+I+ G + +V++ G+VF+ GE + GRLG GV +V P + L ++ VA G
Sbjct: 3064 HISGGSKSLFIVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 3123
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+TL G +++WG+G G LGHGN + P+ V L + ++CG H+A
Sbjct: 3124 KHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAA 3180
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMV 255
++S G+L+T+G G +G LGHGD + P++V +L G R ++ ACG T A+ E
Sbjct: 3181 ISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTE--- 3237
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +F+WGDGD G+LG G E P + L ++ CG ++ALT
Sbjct: 3238 ---------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALT 3288
Query: 316 TSGHVYTMGSPVYGQLGN--------PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+G V+T G Y +LG+ PQ G L R V +A G+ H +T
Sbjct: 3289 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVT 3340
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+VY WG +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3341 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3390
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4143 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4202
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4203 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 4260
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G+ V+ I+CG H+A +TS+G + T+G G +G LGH
Sbjct: 4261 EDGKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGH 4319
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4320 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4367
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4368 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4427
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 4428 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4486
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4487 RLVAALQGKHIVKVTCGSAHTLAL 4510
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 169/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF GEGT +G LG +G V + LP L VV V + GG+HA +
Sbjct: 3079 GKVFACGEGT-NGRLG-----LGVTHNVPLPHQLP-VLHQYVVKKV-AVHSGGKHALALT 3130
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG + + P+L++AL I VACG H+ A++ G+LYTW
Sbjct: 3131 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 3190
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK+V L G V ++CG T +T G +F++GDG
Sbjct: 3191 GLGEY--GRLGHGDNATQLKPKQVTA-LAGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3247
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + + P E+E L G+ ++ CG + A+ +G+++T
Sbjct: 3248 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTR------------AGEVWT 3295
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + P + L VA G +A+T +G VY G +GQ
Sbjct: 3296 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3355
Query: 331 LGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K P V G L FV +ACGS H
Sbjct: 3356 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3387
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 154/308 (50%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 4220 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLV 4279
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4280 EHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4336
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 4337 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 4396
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4397 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4444
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + +G VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4445 IISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4504
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4505 AHTLALST 4512
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E + V +IACG H+A +
Sbjct: 4252 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4301
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4302 SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4361
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4362 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4418
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS +G+++
Sbjct: 4419 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVY 4465
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4466 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4513
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + ++ G V+ G ++ G+GT
Sbjct: 3029 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHISGGSKSLFIVSQDGKVFACGEGT 3088
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3089 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3145 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGELYTWGL 3192
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 3193 GEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3252
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3253 GRGGSEGSATPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3311
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3312 VRKPQPIGGLRGRRVIHVAVGALHCLAV 3339
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 142/318 (44%), Gaps = 54/318 (16%)
Query: 119 PKLIDALSNMN----IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
P L+ +L +N ++ +AC E ++ G LY G P+
Sbjct: 558 PLLVGSLPLLNCRFQVKQIACSESLLLLLSQDGKLYNCRLGK----------------PE 601
Query: 175 RVNGPLEGIHVSSI-----SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
P+E + +I C H + S +++G G LGHGD + ++P ++
Sbjct: 602 LEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKI 661
Query: 230 ESLKGLRTVRAA-CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
+L R V+A CG ++AA+ SG L+TWG G GRLGHG+ + +
Sbjct: 662 SALD--RCVKAVFCGCSYSAAIT------------WSGNLYTWGRGTYGRLGHGNSDDQC 707
Query: 289 VPTCVAALVEPNFCRVACG----HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
VP V AL E VA G HSL LT+ G VY G YG+LGN + L +
Sbjct: 708 VPAIVMALAEYEIIDVALGSGDAHSL--CLTSEGLVYAWGDGDYGKLGNGNCNSSLQPIL 765
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR----NSPSLVEAL 400
L + V+ I G+ LT++ +Y+WGK + LGH + + P LV +L
Sbjct: 766 VETLPR--VQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPRLVSSL 821
Query: 401 KDKQVKSIACGTNFTAAI 418
+ K++ +A G A+
Sbjct: 822 QHKRLVDVAVGVAHCLAL 839
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4145 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4195
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4196 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4252
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +TS V TWGK
Sbjct: 4253 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITSSGHVLTWGK 4311
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4312 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4371
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4372 GRGGSDGCKLPYK 4384
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
V+ + CG ++A + G +++WG + GRLGHG D P ++ AL+ I VA
Sbjct: 668 VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGS 727
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ H+ +T G +Y WGDG Y G LG+GN S P V V I G +
Sbjct: 728 GDAHSLCLTSEGLVYAWGDGDY--GKLGNGNCNSSLQPILVE---TLPRVQRIFAGAQSS 782
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGD-RKSV---SIPREVESLKGLRTVRAACGVWHTAAVV 251
+T+ G L+++G + LGH +SV S+PR V SL+ R V A GV H A+
Sbjct: 783 MALTTEGHLYSWGKAS--CLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALT 840
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
S G++F WG D ++
Sbjct: 841 ------------SCGEVFGWGRNDSQQI 856
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK+F G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3138
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G GRL
Sbjct: 3139 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3198
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P V AL ++V +ACG+ + L
Sbjct: 3199 GHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLAL 3235
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFCRVA--CGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
RLG + +L P + L + +A C +A+ ++ + Y+ G+ +LG+
Sbjct: 596 RLG----KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651
Query: 336 ADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+ +P ++ V+ + CG + A +T +YTWG+G GRLGHG++DD+ P
Sbjct: 652 THARAVPTKISAL--DRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVP 709
Query: 395 SLVEALKDKQVKSIACGTNFTAAICL 420
++V AL + ++ +A G+ ++CL
Sbjct: 710 AIVMALAEYEIIDVALGSGDAHSLCL 735
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 182/362 (50%), Gaps = 25/362 (6%)
Query: 62 MDSSLPKALESA---VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
MD++L + A VVL ++ G H+ + + +WG G+LGHG D L
Sbjct: 1 MDAALSAVADEAPPAVVL----VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLV 56
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTL-SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P +I I V CG HT A + +Y+WG G +FG LGHGN + P+ V
Sbjct: 57 PTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWG--DFGRLGHGNSTDVFTPQPVK 114
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L+GI + ++CG H VT AG++ ++G G LG G + +P+ +++ +G+
Sbjct: 115 -ALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISV 173
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A G HTAAV E G ++ WG G G LG GD+ + VP V+++
Sbjct: 174 KMIAAGAEHTAAVTE------------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVE 221
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEI 356
VACG T+ +++SG +YT G YGQLG+ + L P++VE L S +I
Sbjct: 222 GDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSSTSQI 280
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
+ G H LTS ++Y WG G++G GD D SP+ V ++++V +ACG T
Sbjct: 281 SGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTL 340
Query: 417 AI 418
A
Sbjct: 341 AF 342
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 143/281 (50%), Gaps = 25/281 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G R+G G D P+ +++ + ++ +ACG H V
Sbjct: 88 VYSWGWGD--------FGRLG--HGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMA 137
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV SWG G+LG G D L P+ I A ++++++A G HT AVT GD+Y WG
Sbjct: 138 GEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGW 197
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LG G+ +VP++V+ +EG + ++CG HT V+S+G L+T+G +G
Sbjct: 198 GRY--GNLGLGDRNDRFVPEKVS-SVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQ 254
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LGHGD + +P +VE+LK T + + G HT A+ S GKL+ WG
Sbjct: 255 LGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALT------------SDGKLYGWGWN 302
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G++G GD P V E +VACG T+A T
Sbjct: 303 KFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT 343
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK 350
+ VA P V+ G S +VAL + T G GQLG+ A+ +L V
Sbjct: 6 SAVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDA 65
Query: 351 SFVEEIACGSYHVAVLTS-KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
+ + CG+ H + + +VY+WG G GRLGHG++ D +P V+AL+ ++K +A
Sbjct: 66 PGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA 125
Query: 410 CGTNFTAAICL 420
CG + A+ +
Sbjct: 126 CGDSHCLAVTM 136
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 212/441 (48%), Gaps = 37/441 (8%)
Query: 14 SSAVSSSSQGSGHDDGDALGDVFIW-GEGTGDGVLGG-------GLNRVGSCFGVKMDSS 65
+ AV ++S S D+ + W + D +GG G +R G + +S
Sbjct: 3294 TEAVQNASWTSKQDE-----QIMQWVSQRPQDWQIGGKCKAYMWGSDRHGQLAELGYSAS 3348
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+P +ES + + I CG ++ G V + GE S GRLG G D+ +I +L
Sbjct: 3349 VPVQVESFSI--ARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSL 3406
Query: 126 SNMNIELVACG---EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
I +A + H+ A+ SG++++WGDG +FG LGHGN P+++ L+
Sbjct: 3407 QGFVITDLATSVGSDGHSLALAESGEVFSWGDG--DFGKLGHGNPDRQRRPRQIEA-LQT 3463
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
V ++CG H+AVVTS G+LFTFG+G FG LG G + +P V +L+G R + AC
Sbjct: 3464 EQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVAC 3523
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G+ HTA V + ++T+G+GD G+LG G KL+P V +
Sbjct: 3524 GLNHTACV-----------STDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIK 3572
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+V CG LT+ LT G V+ G + ++ LS +E++A G+ H
Sbjct: 3573 KVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEH 3632
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC--- 419
V LT+ +V WG G+LG P ++ L DK ++ I+ G +AA
Sbjct: 3633 VLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSAAWSAPP 3692
Query: 420 LHKWVSGVDQSMCSGCRLPFN 440
L + V GV +S+ G LP N
Sbjct: 3693 LPQRVPGVTRSLTFG--LPAN 3711
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/388 (31%), Positives = 189/388 (48%), Gaps = 34/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV++WG + + G ++ +P ++S + VQ + G ++
Sbjct: 349 DVYVWGSNSSHQLAEGNQEKI----------LMP--VKSKMFTQVQQVEAGQYCTFAIHW 396
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPK--LIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
G V + G+ S GRLG G S+ PK L+D + + + HT A+ +G +Y+
Sbjct: 397 DGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVK-KLSSSKGSDGHTLALAETGVVYS 455
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WGDG Y G LGHGN +H P+R+ GP G + I G H+A VT G+L+T+G+G
Sbjct: 456 WGDGDY--GKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGD 513
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK-LFT 270
G LGHGD + +P +V L + +V ACG HT V GK +++
Sbjct: 514 HGRLGHGDSNARYVPTQVAGLAEVGSV--ACGSSHTLVV------------SKDGKTVWS 559
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G G+ G+LG G+ P V AL +V G ++ALTT+G VYT GS
Sbjct: 560 FGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILG 619
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT-D 389
G+ A LP VE L++ + +I+ G H LT + EV+ WG + G+ G G T
Sbjct: 620 KGSADAIVNLPMYVE-DLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCS 678
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L+ ++ I+ GT+ + A
Sbjct: 679 PITRPLKVIGLEGVSIRQISAGTSHSMA 706
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 139/289 (48%), Gaps = 32/289 (11%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
D+Y WG + + L GN+ +P + V + G + T + G +
Sbjct: 349 DVYVWGSNSSH--QLAEGNQEKILMPVKSKM---FTQVQQVEAGQYCTFAIHWDGSVSAC 403
Query: 208 GDGTFGVLGHGDRKSVSIPREVE---SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
G G++G LG G+ + S+P+ + +K L + + + G HT A+ E
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDG--HTLALAE------------ 449
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTM 323
+G +++WGDGD G+LGHG+ P + + + G+ + A+T G +YT
Sbjct: 450 TGVVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTW 509
Query: 324 GSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWGKGANG 381
G +G+LG+ ++ + +P +V G V +ACGS H V++ V+++G G +G
Sbjct: 510 GEGDHGRLGHGDSNARYVPTQVAGLAE---VGSVACGSSHTLVVSKDGKTVWSFGSGEHG 566
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+LG G+ P +VEAL+ ++ + GT F+ A+ ++ W SG
Sbjct: 567 KLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSG 615
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 131/308 (42%), Gaps = 31/308 (10%)
Query: 12 SLSSAVSSSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
SL V + S DG +L G+VF WG+G + G +R
Sbjct: 3405 SLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDR----------QRR 3454
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ V +ACG +H+A+V G++F++G G+LG G ++ P+ + AL
Sbjct: 3455 PRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALE 3514
Query: 127 NMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
I VACG HT V+ G ++T+G+G Y G LG G +P++V + + +
Sbjct: 3515 GYRIGQVACGLNHTACVSTDGMTVWTFGEGDY--GKLGLGYATMKLLPQKVET-VCNLGI 3571
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+ CG T +T G++F G ++V P+ + SL A G
Sbjct: 3572 KKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTE 3631
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H + + GK+ WG +G+LG P + L + +++
Sbjct: 3632 HVLFLT------------TCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQIS 3679
Query: 306 CGHSLTVA 313
G + + A
Sbjct: 3680 TGRTHSAA 3687
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 196/385 (50%), Gaps = 25/385 (6%)
Query: 39 GEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
G GT + G G N G G++ +P E+ L + G + V G++
Sbjct: 221 GSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKL 277
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDG 155
++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y+WG+
Sbjct: 278 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA 337
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G +G L
Sbjct: 338 --EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRL 394
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK--LFTWGD 273
GH D + P+ VE+L+G R + ACG + + C + +++WGD
Sbjct: 395 GHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWSWGD 442
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD G+LG G + VP + +L +V CG +VALT SG VYT G Y +LG+
Sbjct: 443 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH 502
Query: 334 PQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 503 GSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 561
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 562 RPRLVAALQGKKVNRVACGSAHTLA 586
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 159/314 (50%), Gaps = 42/314 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G NR C P+ +ES ++V ++A GG H+A V
Sbjct: 329 GEVYSWGEAE-DGKLGHG-NR-SPC-------DRPRVIESLRGIEVVDVAAGGAHSACVT 378
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 379 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVW 438
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 439 SWGDGDY--GKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 495
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 496 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 543
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 544 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS------------- 590
Query: 331 LGNPQADGKLPNRV 344
P + GKLP +V
Sbjct: 591 --KPASAGKLPAQV 602
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G R+G D PK +E+ V +IACG A
Sbjct: 379 AAGDLYTWGKGR--------YGRLG--HSDSEDQLKPKLVEALQGHRVIDIACGSGDAQT 428
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 429 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 488
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 489 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 545
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 546 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 598
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 146 SGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y WG + G LG G +V P L + + G VT+ G+
Sbjct: 222 SGTIYGWGHN--HRGQLGGIEGAKVKVPTPCEALATLRPVQLIG---GEQTLFAVTADGK 276
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+ G G G LG G +SVS P +ES++ + + A NS +C
Sbjct: 277 LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------NSGGKHC 322
Query: 264 ----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S G++++WG+ + G+LGHG++ P + +L VA G + + +T +G
Sbjct: 323 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 382
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGK 377
+YT G YG+LG+ ++ +L ++ L V +IACGS LT V++WG
Sbjct: 383 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGD 442
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 443 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 483
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 222 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 272
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 273 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 329
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 389
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 390 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 431
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 190/381 (49%), Gaps = 49/381 (12%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDA 124
P +E ++ + G + + GEV+SWG+ GG LGH + ++ P+ I+
Sbjct: 73 PTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEK 132
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-------------SH- 170
L I+ ++CG++H AVT G++YTWG+ FG LGH E+ SH
Sbjct: 133 LLGKKIKQISCGQFHMAAVTEDGEVYTWGNK--EFGKLGHEEELKQEQKIKIKRGNLSHD 190
Query: 171 -----WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDRKSVS 224
+P+++ L I ++CG T V++ G+++TFG +G LG+ D+ SV+
Sbjct: 191 YLQDSMLPQKIE-SLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVT 249
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
P+ ++ L + V+ + G AA+ + GKL+TWG+ G+LG+
Sbjct: 250 TPQLIKDLNDI--VKISAGYSFCAAITK------------QGKLYTWGNNRNGQLGNSQS 295
Query: 285 EAKLVPTCVAALVEPN-FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPN 342
+ P+ V N V+CG + ALT G +YT G GQLG+ ++D P
Sbjct: 296 LYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPR 355
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG-----DTDDRNSPSLV 397
VE K + +IACG H A +T ++Y +G+G+ G+LG G + R++P+LV
Sbjct: 356 HVE---FKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLV 412
Query: 398 EALKDKQVKSIACGTNFTAAI 418
+ K KQV + CG T AI
Sbjct: 413 QYFKGKQVVDVTCGGEHTIAI 433
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 186/345 (53%), Gaps = 42/345 (12%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG G+LG +++ P I+ L++ I+ V G+ + A+T +G++Y+WG
Sbjct: 51 VYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN- 109
Query: 157 YNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G+LGH + +S + P+R+ L G + ISCG +H A VT G+++T+G+ FG
Sbjct: 110 -KGGILGHEDRLSFNMTQPERIE-KLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGK 167
Query: 215 LGHGD-----------RKSVS--------IPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
LGH + R ++S +P+++ESL ++ + ACG+ T + E
Sbjct: 168 LGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE--- 224
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGH-GDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
GK++T+G G LG+ D+ + P + L + +++ G+S A+
Sbjct: 225 ---------DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDL--NDIVKISAGYSFCAAI 273
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T G +YT G+ GQLGN Q+ + P+ V G S++ + +++CG +A LT + ++Y
Sbjct: 274 TKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLY 333
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
TWG G +G+LGHG+ D +P VE K K +K IACG + A I
Sbjct: 334 TWGFGGDGQLGHGNKSDLYAPRHVE-FKQKIIK-IACGGSHAAFI 376
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 167/366 (45%), Gaps = 55/366 (15%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG+ G G+LG +R+ + + P+ +E + ++ I+CG H A V
Sbjct: 101 GEVYSWGKNKG-GILGHE-DRL------SFNMTQPERIEKLLGKKIKQISCGQFHMAAVT 152
Query: 93 KQGEVFSWGEESGGRLGHGVD-------------------SDVLHPKLIDALSNMNIELV 133
+ GEV++WG + G+LGH + D + P+ I++L N+ + V
Sbjct: 153 EDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQV 212
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
ACG T ++ G +YT+G YN +G LG+ ++ + ++ L I IS G
Sbjct: 213 ACGIQFTVVLSEDGKVYTFG---YNQYGSLGYVSDQNSVTTPQLIKDLNDI--VKISAGY 267
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT-VRAACGVWHTAAVV 251
A +T G+L+T+G+ G LG+ + P V + V +CG AA+
Sbjct: 268 SFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALT 327
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ G+L+TWG G G+LGHG+K P V + ++ACG S
Sbjct: 328 Q------------QGQLYTWGFGGDGQLGHGNKSDLYAPRHVE--FKQKIIKIACGGSHA 373
Query: 312 VALTTSGHVYTMGSPVYGQLG---NPQADGKL---PNRVEGKLSKSFVEEIACGSYHVAV 365
+T +Y G GQLG N ++ + PN V+ K V ++ CG H
Sbjct: 374 AFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVV-DVTCGGEHTIA 432
Query: 366 LTSKTE 371
+T + +
Sbjct: 433 ITQEFQ 438
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWV 424
+T VY+WG G G+LG + ++ +P+ +E L DK++K + G + + A+ ++ W
Sbjct: 48 ETIVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWG 107
Query: 425 SGVDQSMCSGCRLPFNNFKRKR 446
+ RL FN + +R
Sbjct: 108 KNKGGILGHEDRLSFNMTQPER 129
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 181/344 (52%), Gaps = 35/344 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDV++WG G+ V L+ +G+ G D LP +ES + +V ++ G H+A +
Sbjct: 643 GDVYMWGRGS---VKNPPLSTLGN--GSLEDQLLPTKVES--LSEVVLVSIGYYHSAALK 695
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH---PKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
GE+ +WG G+LGHG DVL+ PK++ +++ + V CGE HT +T +G +
Sbjct: 696 SNGELLTWGCGEDGQLGHG---DVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKV 752
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+TW GT +G LG G+ + P V LE ++ I+CG H AV+T+A ++ FG+
Sbjct: 753 FTW--GTSEYGQLGLGDTQKNCTPMLVTS-LEKYNIIQIACGSTHCAVLTNAREVLVFGN 809
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G +S+P V +LK L R +CG + TAA+ E C G ++
Sbjct: 810 GA----AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTE----------C--GDVY 853
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG G + LGHG +++L P V L + +++CG LT SG +YT G +G
Sbjct: 854 TWGSGQE--LGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYTCGKDPFG 911
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
QLG+ Q D P +++ L +F+ ++CG H A L T +
Sbjct: 912 QLGHAQGDQNKPKKIDSLLKTTFI-SVSCGENHNASLFDTTRSF 954
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 33/367 (8%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG-----GRLGHGVD 113
G + + P+ L + + ++ +I+CG ++A + + G+V+ WG S LG+G
Sbjct: 607 GREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSL 666
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
D L P +++LS + LV+ G YH+ A+ +G+L TWG G G LGHG+ ++ +P
Sbjct: 667 EDQLLPTKVESLSE--VVLVSIGYYHSAALKSNGELLTWGCG--EDGQLGHGDVLNQTIP 722
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK 233
K V + V+ + CG HT +T G++FT+G +G LG GD + P V SL+
Sbjct: 723 KVVQT-MTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLE 781
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
++ ACG H A + ++ ++ +G+G G VP V
Sbjct: 782 KYNIIQIACGSTHCAVLT------------NAREVLVFGNG----AAMGSANIISVPMMV 825
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ-LGNPQADGKL-PNRVEGKLSKS 351
AL N R++CGH T ALT G VYT GS GQ LG+ +L P V+G S+S
Sbjct: 826 PALKHLNIERLSCGHYSTAALTECGDVYTWGS---GQELGHGTNQSELHPKLVDGLRSQS 882
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+ +I+CG H+A LT ++YT GK G+LGH D+N P +++L S++CG
Sbjct: 883 -IRQISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQ-GDQNKPKKIDSLLKTTFISVSCG 940
Query: 412 TNFTAAI 418
N A++
Sbjct: 941 ENHNASL 947
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 162/332 (48%), Gaps = 27/332 (8%)
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-EL--VACGEYHTCA 142
R A ++ Q + +WG S +LG + + L N NI E+ ++CG Y++ A
Sbjct: 579 RSATQLDTQRGIMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAA 638
Query: 143 VTLSGDLYTWGDGTYN---FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+T +GD+Y WG G+ LG+G+ +P +V E V +S G +H+A +
Sbjct: 639 LTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSE---VVLVSIGYYHSAALK 695
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
S G+L T+G G G LGHGD + +IP+ V+++ + CG HT + +
Sbjct: 696 SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTK------- 748
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+GK+FTWG + G+LG GD + P V +L + N ++ACG + LT +
Sbjct: 749 -----NGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNARE 803
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
V G+ G +P V L +E ++CG Y A LT +VYTWG G
Sbjct: 804 VLVFGN---GAAMGSANIISVPMMVPA-LKHLNIERLSCGHYSTAALTECGDVYTWGSGQ 859
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
LGHG P LV+ L+ + ++ I+CG
Sbjct: 860 --ELGHGTNQSELHPKLVDGLRSQSIRQISCG 889
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 143/291 (49%), Gaps = 35/291 (12%)
Query: 149 LYTWGDGTY-NFGLLGHGNEVSHWVPKRV---NGPLEGIHVSSISCGPWHTAVVTSAGQL 204
+ TWG + G G E S P+R+ N P + SISCG +++A +T G +
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIP----EICSISCGSYYSAALTENGDV 645
Query: 205 FTFGDGT-----FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ +G G+ LG+G + +P +VESL V + G +H+AA+
Sbjct: 646 YMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLS--EVVLVSIGYYHSAALK-------- 695
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
S+G+L TWG G+ G+LGHGD + +P V + +V CG T+ LT +G
Sbjct: 696 ----SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGK 751
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
V+T G+ YGQLG + L K + +IACGS H AVLT+ EV +G GA
Sbjct: 752 VFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGA 811
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
G + + P +V ALK ++ ++CG TAA+ ++ W SG
Sbjct: 812 ----AMGSANIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSG 858
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 169/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GEGT +G LG +G V + LP L VV V + GG+HA +
Sbjct: 3097 GKVYACGEGT-NGRLG-----LGVTHNVPLPHQLP-VLHQYVVKKV-AVHSGGKHALALT 3148
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG S + P+L++AL I +ACG H+ A++ G+LYTW
Sbjct: 3149 LDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTW 3208
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3209 GLGEY--GRLGHGDNATQLKPKLVTA-LHGRRVIQVACGSRDAQTLALTEDGAVFSWGDG 3265
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + + P E+E L G+ ++ CG + A+ +G+++T
Sbjct: 3266 DFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTR------------AGEVWT 3313
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + P +A L VA G +A+T +G VY G +GQ
Sbjct: 3314 WGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3373
Query: 331 LGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K P V G L FV +ACGS H
Sbjct: 3374 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3405
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 21/343 (6%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GE 137
+IA G + +V++ G+V++ GE + GRLG GV +V P + L ++ VA G
Sbjct: 3082 HIAGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 3141
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+TL G +++WG+G G LGHGN + P+ V L + I+CG H+A
Sbjct: 3142 KHALALTLDGKVFSWGEG--EDGKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAA 3198
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMV 255
++S G+L+T+G G +G LGHGD + P+ V +L G R ++ ACG T A+ E
Sbjct: 3199 ISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTE--- 3255
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +F+WGDGD G+LG G E P + L ++ CG ++ALT
Sbjct: 3256 ---------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALT 3306
Query: 316 TSGHVYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
+G V+T G Y +LG+ + P + G L V +A G+ H +T +VY
Sbjct: 3307 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYA 3365
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
WG +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3366 WGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4196 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFA 4255
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4256 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEG-- 4313
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK + L G+ V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 4314 EDGKLGHGNRMSYDRPKLLEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4372
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4373 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4420
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4421 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4480
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 4481 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4539
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4540 RLVAALQGKHIVKVTCGSAHTLAL 4563
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK LE + V +IACG H+A +
Sbjct: 4305 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLLEHLNGMSVADIACGSAHSAAIT 4354
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4355 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4414
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4415 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4471
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS +G+++
Sbjct: 4472 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVY 4518
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4519 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4566
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + GEV++WGE G+LGHG PKL+
Sbjct: 4273 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLL 4332
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4333 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4389
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 4390 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 4449
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4450 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4497
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + +G VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4498 IISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4557
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4558 AHTLALST 4565
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G +Y G+GT
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3106
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3107 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3162
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3163 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI------------SSQGELYTWGL 3210
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 3211 GEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3270
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3271 GRGGSEGSATPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3329
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3330 VRKPQPIAGLRGRRVIHVAVGALHCLAV 3357
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 34/315 (10%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
++ +AC L+ ++G++++W + P+L+D N V+
Sbjct: 571 FQLKQVACSEDMVVLLCQEGKLYNWP----------IAKPETEPQLLDFAEIANETFVSI 620
Query: 135 ---CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
C H AV + + Y+WG G LGHG+ + +P ++ + V S+ CG
Sbjct: 621 AAHCEGRHFLAVDSNHNAYSWGVGDSRR--LGHGDCHARELPTKIESLVR--RVQSVYCG 676
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
++A +T G L+T+G GT+G LGHG+ +P V +LK + + A G
Sbjct: 677 CSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGS------- 729
Query: 252 EVMVGNSSSSNCSSGKL-FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
G++ + + G L + WGDGD G+LG+G + L P + L P RV G
Sbjct: 730 ----GDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL--PRVQRVFAGSQF 783
Query: 311 TVALTTSGHVYTMG--SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
++ALT G +Y+ G S + QL G R+ L + +A G H L+S
Sbjct: 784 SLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSS 843
Query: 369 KTEVYTWGKGANGRL 383
E++ WG+ N ++
Sbjct: 844 NGEIFGWGRNDNQQI 858
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 28/222 (12%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
LP +ES +V VQ++ CG ++A + +G +++WG + GRLGHG D P ++ A
Sbjct: 658 ELPTKIES-LVRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMA 716
Query: 125 LSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLE 181
L + + VA G+ HT +T G +Y WGDG Y G LG+G+ S P + P
Sbjct: 717 LKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY--GKLGNGSCNSSLQPLLIECLP-- 772
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRKSVSIPREVESLKGLRT 237
V + G + +T GQL+++G + LGH + + S+PR + SL+ R
Sbjct: 773 --RVQRVFAGSQFSLALTCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRI 828
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
V A GV H A+ S+G++F WG D ++
Sbjct: 829 VHVAVGVAHCLAL------------SSNGEIFGWGRNDNQQI 858
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR ++ A G AV
Sbjct: 4198 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVT--------- 4248
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4249 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4305
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY G G+LG+ ++ L+ V +IACGS H A +T+ V TWGKG
Sbjct: 4306 EVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4365
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------VD 428
GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4366 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4425
Query: 429 QSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4426 RGGSDGCKLPYK 4437
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 17/208 (8%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG GD RLGHGD A+ +PT + +LV V CG S + A+T G++YT G Y
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCSYSAAITLRGNLYTWGRGTY 697
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGHG 386
G+LG+ +D + + L V ++A GS H LT VY WG G G+LG+G
Sbjct: 698 GRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNG 757
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG------VDQSMCSGCR 436
+ P L+E L +V+ + G+ F+ A+ L+ W + + GC
Sbjct: 758 SCNSSLQPLLIECL--PRVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCS 815
Query: 437 LP--FNNFKRKRHNCYNCGLVFCHSCSS 462
+P + + KR G+ C + SS
Sbjct: 816 VPRLITSLQHKRIVHVAVGVAHCLALSS 843
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK++ G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 3097 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3156
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + +IACGS H A ++S+ E+YTWG G GRL
Sbjct: 3157 GEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL 3216
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL ++V +ACG+ + L
Sbjct: 3217 GHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLAL 3253
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CGHSLTVALTTSGHV 320
C GKL+ W + + E +L+ A + F +A C +A+ ++ +
Sbjct: 587 CQEGKLYNWP------IAKPETEPQLLD--FAEIANETFVSIAAHCEGRHFLAVDSNHNA 638
Query: 321 YTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
Y+ G +LG+ + LP ++E + + V+ + CG + A +T + +YTWG+G
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVRR--VQSVYCGCSYSAAITLRGNLYTWGRGT 696
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
GRLGHG++DD+ P++V ALKD QV +A G+ +CL +
Sbjct: 697 YGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTR 739
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 173/337 (51%), Gaps = 34/337 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKM--DSSLPKALESAVVLDVQNIACGGRHAAL 90
GDV++WG G+ N G+ D LP LES + D+ ++ G H+A
Sbjct: 653 GDVYMWGRGSVK-------NPPVPVLGIPQIEDQLLPIKLES--LTDIVVVSIGFYHSAA 703
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V GE+ +WG G+LGHG + + PK+I +L++ I V CGE HT +T +G +Y
Sbjct: 704 VRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVY 763
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
TWG Y G LG G+ + P V LE +V I+ G H AV+T++ ++ FG+G
Sbjct: 764 TWGSSEY--GQLGLGDTTRYCKPMPVTA-LEKYNVLQIASGSTHCAVLTNSKEVLVFGNG 820
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +SIP V SLK L + CG + TAA+ S C G ++T
Sbjct: 821 A----AMGAASIISIPTLVPSLKYLHIDKLCCGHYSTAAI----------SEC--GDVYT 864
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G + LGHG+ + + P V AL + +++CG T LT SG ++T G +GQ
Sbjct: 865 WGTGQE--LGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQ 922
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACG-SYHVAVL 366
LG+ D P ++E +F+ ++CG +Y++A+
Sbjct: 923 LGHQAGDQNKPKKIESLTKTTFI-SVSCGENYNIALF 958
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 176/357 (49%), Gaps = 29/357 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR-----LGHGVDSDVLHPKL 121
P+ L + V D+ +I+ G ++A + + G+V+ WG S LG D L P
Sbjct: 625 PERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIK 684
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L++ I +V+ G YH+ AV +G+L TWG G G LGHG+ + PK + L
Sbjct: 685 LESLTD--IVVVSIGFYHSAAVRANGELLTWGVGEE--GQLGHGDTQNQVEPKVIQS-LT 739
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
++ + CG HT +T G+++T+G +G LG GD P V +L+ ++ A
Sbjct: 740 SFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIA 799
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G H A + +S ++ +G+G G +PT V +L +
Sbjct: 800 SGSTHCAVL------------TNSKEVLVFGNG----AAMGAASIISIPTLVPSLKYLHI 843
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
++ CGH T A++ G VYT G+ GN Q + P VE ++S + +I+CG
Sbjct: 844 DKLCCGHYSTAAISECGDVYTWGTGQELGHGNNQTEST-PKLVEALRNQS-IRQISCGGR 901
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H A LT ++T GK + G+LGH D+N P +E+L S++CG N+ A+
Sbjct: 902 HTAFLTDSGRIFTSGKDSFGQLGH-QAGDQNKPKKIESLTKTTFISVSCGENYNIAL 957
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE---LVACGEYHTCAVTLSGDLYTWG 153
+ +WG S +LG V S + L N N+ ++ G Y++ A+T +GD+Y WG
Sbjct: 600 LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWG 659
Query: 154 DGTYN---FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G+ +LG +P ++ L I V +S G +H+A V + G+L T+G G
Sbjct: 660 RGSVKNPPVPVLGIPQIEDQLLPIKLES-LTDIVV--VSIGFYHSAAVRANGELLTWGVG 716
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHGD ++ P+ ++SL + CG HT + + +GK++T
Sbjct: 717 EEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTK------------NGKVYT 764
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG + G+LG GD P V AL + N ++A G + LT S V G+ G
Sbjct: 765 WGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGN---GA 821
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
+ +P V L ++++ CG Y A ++ +VYTWG G LGHG+
Sbjct: 822 AMGAASIISIPTLVPS-LKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQT 878
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAIC 419
++P LVEAL+++ ++ I+CG TA +
Sbjct: 879 ESTPKLVEALRNQSIRQISCGGRHTAFLT 907
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR-----LGHGDKEAKLVPTCVAA 295
+ G +++AA+ E +G ++ WG G LG E +L+P + +
Sbjct: 640 SSGSYYSAALTE------------NGDVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLES 687
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE 355
L + V+ G + A+ +G + T G GQLG+ ++ +V L+ ++ +
Sbjct: 688 LTD--IVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQ 745
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
+ CG H LT +VYTWG G+LG GDT P V AL+ V IA G+
Sbjct: 746 VQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHC 805
Query: 416 AAICLHKWV 424
A + K V
Sbjct: 806 AVLTNSKEV 814
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 194/382 (50%), Gaps = 18/382 (4%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4233 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4292
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4293 TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 4350
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G++V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 4351 EDGKLGHGNRMSYDRPKLVEH-LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4409
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
GD + P+ VE+L G R + ACG + + + N + +++WGDGD G
Sbjct: 4410 GDSEDQLRPQLVEALLGYRAIDIACG----SGDAQTLCINDDDN------VWSWGDGDYG 4459
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD 337
+LG G + +P + +L +V CG +VALT SG VYT G + +LG+ D
Sbjct: 4460 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4519
Query: 338 G-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSL 396
+ P +V K + IA GS H + EVYTWG G+LG G P L
Sbjct: 4520 HVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRL 4578
Query: 397 VEALKDKQVKSIACGTNFTAAI 418
V AL+ K + + CG+ T A+
Sbjct: 4579 VAALQGKHIVKVTCGSAHTLAL 4600
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 197/399 (49%), Gaps = 31/399 (7%)
Query: 24 SGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC 83
+G D D V +WG + + GGL G K+ +P ++ L +IA
Sbjct: 3086 AGALDQDLPCTVMVWGLNDKEQL--GGLK------GSKV--KVPTFSQTISRLRPIHIAG 3135
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTC 141
G + +V + G+V++ GE + GRLG GV +V P + L ++ VA G H
Sbjct: 3136 GSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3195
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+TL G +++WG+G G LGHGN + P+ V L + ++CG H+A ++S
Sbjct: 3196 ALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVET-LRSKKIRDVACGSSHSAAISSQ 3252
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSS 259
G+L+T+G G +G LGHGD + P+ V +L G R ++ ACG T A+ E
Sbjct: 3253 GELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTE------- 3305
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G +F+WGDGD G+LG G E P + L ++ CG ++ALT +G
Sbjct: 3306 -----DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGE 3360
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V+T G Y +LG+ + P + G L V +A G+ H +T +VY WG
Sbjct: 3361 VWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDN 3419
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3420 DHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 4310 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLV 4369
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ MN+ +ACG H+ A+T SG + TWG G Y G LGHG+ P+ V L G
Sbjct: 4370 EHLNGMNVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPQLVEA-LLG 4426
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T + ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 4427 YRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 4486
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4487 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4534
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + SG VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4535 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4594
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4595 AHTLALST 4602
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E ++V +IACG H+A +
Sbjct: 4342 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMNVADIACGSAHSAAIT 4391
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L P+L++AL +ACG + T + +++
Sbjct: 4392 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVW 4451
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4452 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4508
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS SG+++
Sbjct: 4509 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 4555
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4556 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4603
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 165/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V +G +Y G+GT
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 3156
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3157 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3213 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI------------SSQGELYTWGL 3260
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P VAAL +VACG + T+ALT G V++ G +G+L
Sbjct: 3261 GEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3320
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3321 GRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3379
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3380 VRKPQPIAGLRGRRVIHVAVGALHCLAV 3407
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 36/309 (11%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
VQ I C ++++ G++++W + P+L++ +++ I +A
Sbjct: 576 FQVQQIVCSESIVLILSEDGKLYNWR----------MFKPETEPQLLEEIAHETIVSIAS 625
Query: 135 -CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
C H A+ ++ + Y+WG+G + LGHG+ + VP ++ L V ++ CG
Sbjct: 626 HCEGRHFMAIDINRNAYSWGNGEDHR--LGHGDTHARAVPTKIT--LLDRCVKAVFCGCS 681
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
++A +T +G L+T+G GT+ LGHG+ +P V +L + A G
Sbjct: 682 YSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALG---------- 731
Query: 254 MVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ S C S G ++ WGD D G+LG+G+ + P V +L P RV G +
Sbjct: 732 --SGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL--PKVQRVFAGAQFS 787
Query: 312 VALTTSGHVYTMG--SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+ALTT G +Y+ G S + QL A +P + G K V+ +A G H L+S
Sbjct: 788 MALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVD-VAVGVAHCLALSS 846
Query: 369 KTEVYTWGK 377
EV+ WG+
Sbjct: 847 CGEVFGWGR 855
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4235 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4285
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4286 ---PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4342
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +T+ V TWGK
Sbjct: 4343 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITASGHVLTWGK 4401
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH------KWVSG----V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C++ W G +
Sbjct: 4402 GRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKL 4461
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4462 GRGGSDGCKLPYK 4474
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG+G+ RLGHGD A+ VPT + L++ V CG S + A+T SG++YT G Y
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKIT-LLDRCVKAVFCGCSYSAAITCSGNLYTWGRGTY 700
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGHG 386
+LG+ +D + V L++ + ++A GS H LTS+ VY WG G+LG+G
Sbjct: 701 ARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG 760
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI-------------CLHKWVSGVDQSMCS 433
+ + SP LVE+L +V+ + G F+ A+ CL + CS
Sbjct: 761 NLNGSMSPVLVESL--PKVQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVERSAQWCS 818
Query: 434 GCRLPFNNFKRKRHNCYNCGLVFCHSCSS 462
RL + + KR G+ C + SS
Sbjct: 819 VPRL-ISGLQHKRIVDVAVGVAHCLALSS 846
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVY 321
+GK++ G+G GRLG G +P + L + +VA G +ALT G V+
Sbjct: 3145 QNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 3204
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
+ G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G G
Sbjct: 3205 SWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYG 3264
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
RLGHGD + P LV AL ++V +ACG+ + L
Sbjct: 3265 RLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLAL 3303
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 37/214 (17%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
V+ + CG ++A + G +++WG + RLGHG D P ++ AL+ I VA
Sbjct: 673 VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGS 732
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS------ 189
G+ H+ +T G +Y WGD Y G LG+GN +NG + + V S+
Sbjct: 733 GDAHSLCLTSEGHVYAWGDADY--GKLGNGN---------LNGSMSPVLVESLPKVQRVF 781
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRKS--VSIPREVESLKGLRTVRAACGVW 245
G + +T+ GQL+++G + LGH +R + S+PR + L+ R V A GV
Sbjct: 782 AGAQFSMALTTDGQLYSWGKAS--CLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVA 839
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
H A+ S+C G++F WG D ++
Sbjct: 840 HCLAL----------SSC--GEVFGWGRNDSQQI 861
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
++ C S+ + L+ G +Y ++ P+ + +L + + S C H
Sbjct: 580 QIVCSESIVLILSEDGKLYNW------RMFKPETEPQLLEEIAHETIVSIASH--CEGRH 631
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC--- 419
+ Y+WG G + RLGHGDT R P+ + L D+ VK++ CG +++AAI
Sbjct: 632 FMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKI-TLLDRCVKAVFCGCSYSAAITCSG 690
Query: 420 -LHKWVSG 426
L+ W G
Sbjct: 691 NLYTWGRG 698
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/399 (32%), Positives = 198/399 (49%), Gaps = 31/399 (7%)
Query: 24 SGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC 83
+GH D + V +WG + + GGL G K+ +P + L +IA
Sbjct: 3052 TGHTDQELPCTVMVWGLNDKEQL--GGLK------GSKV--KVPTFSPTISRLRPIHIAG 3101
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTC 141
G + +V++ G+V++ GE + GRLG GV +V P + L ++ VA G H
Sbjct: 3102 GSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 3161
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+TL G +++WG+G G LGHGN + P+ V L + I+CG H+A ++S
Sbjct: 3162 ALTLDGKVFSWGEG--EDGKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQ 3218
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSS 259
G+L+T+G G +G LGHGD + P+ V +L G R ++ ACG T A+ E
Sbjct: 3219 GELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTE------- 3271
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G +F+WGDGD G+LG G E P + L ++ CG ++ALT +G
Sbjct: 3272 -----DGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGE 3326
Query: 320 VYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V+T G Y +LG+ + P + G L V +A G+ H +T +VY WG
Sbjct: 3327 VWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGHRVIHVAVGALHCLAVTDAGQVYAWGDN 3385
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3386 DHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4211 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4270
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4271 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEG-- 4328
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G+ V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 4329 EDGKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4387
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4388 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4435
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4436 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4495
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+ + P +V K + IA GS H + EV+TWG G+LG G P
Sbjct: 4496 VEHVRRPKKVAALQGKKII-SIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRP 4554
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4555 RLVAALQGKHIVKVTCGSAHTLAL 4578
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 153/288 (53%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E + V +IACG H+A +
Sbjct: 4320 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4369
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4370 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4429
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4430 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4486
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG + V P++V +L+G + + A G H A CS +G++F
Sbjct: 4487 DFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVF 4533
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4534 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4581
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + GEV++WGE G+LGHG PKL+
Sbjct: 4288 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLV 4347
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4348 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4404
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 4405 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 4464
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG E P VAAL
Sbjct: 4465 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKK 4512
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + +G V+T G GQLG+ R+ L + ++ CGS
Sbjct: 4513 IISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4572
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4573 AHTLALST 4580
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G +Y G+GT
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3122
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3123 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3178
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3179 KLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAI------------SSQGELYTWGL 3226
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P VAAL +VACG + T+ALT G V++ G +G+L
Sbjct: 3227 GEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3286
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3287 GRGGSEGSSTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3345
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ +V +A G A+
Sbjct: 3346 VRKPQPIAGLRGHRVIHVAVGALHCLAV 3373
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 147/317 (46%), Gaps = 38/317 (11%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
+Q +AC L++K+G++++W H + P+ +D N ++
Sbjct: 600 FQLQQVACSEDVVLLLSKEGKLYNW---------HIAKPEA-EPQQLDFAEIANETFISI 649
Query: 135 ---CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
C H AV + + Y+WG G LGHG+ + +P ++ + V S+ CG
Sbjct: 650 AAHCEGRHFLAVDSNFNAYSWGVGDSRR--LGHGDCHARELPTKIESLVR--LVKSVYCG 705
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAA 249
++A +T G L+T+G GT+G LGHG +P V +LK + V A G HT
Sbjct: 706 CSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLC 765
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ S G +F WGDGD G+LG+G + L+P + L P RV G
Sbjct: 766 LT------------SEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL--PRVQRVFAGAQ 811
Query: 310 LTVALTTSGHVYTMG--SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVL 366
++AL+ G +Y+ G S + QL G +P + G K V ++A G H L
Sbjct: 812 FSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIV-DVAVGVAHCLAL 870
Query: 367 TSKTEVYTWGKGANGRL 383
+S E++ WG+ N ++
Sbjct: 871 SSSGEIFGWGRNDNQQI 887
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4213 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4263
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4264 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4320
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +T+ V TWGK
Sbjct: 4321 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGK 4379
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4380 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4439
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4440 GRGGSDGCKLPYK 4452
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
LP +ES V L V+++ CG ++A + G +++WG + GRLGHG D P ++ AL
Sbjct: 688 LPTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMAL 746
Query: 126 SNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEG 182
+ + VA G+ HT +T G ++ WGDG Y G LG+G+ S +P+ ++ P
Sbjct: 747 KDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY--GKLGNGSCNSSLLPQLIDCLP--- 801
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRKSVSIPREVESLKGLRTV 238
V + G + ++ GQL+++G + LGH + + S+PR + L+ R V
Sbjct: 802 -RVQRVFAGAQFSLALSCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITGLQHKRIV 858
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
A GV H A+ SSG++F WG D ++
Sbjct: 859 DVAVGVAHCLAL------------SSSGEIFGWGRNDNQQI 887
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK++ G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 3113 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3172
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + +IACGS H A ++S+ E+YTWG G GRL
Sbjct: 3173 GEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL 3232
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL ++V +ACG+ + L
Sbjct: 3233 GHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLAL 3269
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG GD RLGHGD A+ +PT + +LV V CG S + A+T G++YT G Y
Sbjct: 668 YSWGVGDSRRLGHGDCHARELPTKIESLVR-LVKSVYCGCSYSAAITLGGNLYTWGRGTY 726
Query: 329 GQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGH 385
G+LG+ +D + LP V L V ++A GS H LTS+ V+ WG G G+LG+
Sbjct: 727 GRLGHGTSDDQCLPAMVMA-LKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGN 785
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG------VDQSMCSGC 435
G + P L++ L +V+ + G F+ A+ L+ W + + GC
Sbjct: 786 GSCNSSLLPQLIDCL--PRVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGC 843
Query: 436 RLP--FNNFKRKRHNCYNCGLVFCHSCSS 462
+P + KR G+ C + SS
Sbjct: 844 SVPRLITGLQHKRIVDVAVGVAHCLALSS 872
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 198/390 (50%), Gaps = 25/390 (6%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVK-MDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ G GT + G G N G G++ +P E+ L + G + V
Sbjct: 13 NLYFQGSGT---IYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 69
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLY 150
G++++ G +GGRLG G V P L++++ ++ I+ VA G H A++ G++Y
Sbjct: 70 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 129
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+ G LGHGN P RV L GI V ++ G H+A VT+AG L+T+G G
Sbjct: 130 SWGEA--EDGKLGHGNRSPCDRP-RVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKL 268
+G LGH D + P+ VE+L+G R V ACG + + C +
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG------------SGDAQTLCLTDDDTV 234
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WGDGD G+LG G + VP + +L +V CG +VALT SG VYT G Y
Sbjct: 235 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 294
Query: 329 GQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+LG+ D + P +V+G K + IA GS H T EVYTWG G+LG G
Sbjct: 295 HRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 353
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T+ P LV AL+ K+V +ACG+ T A
Sbjct: 354 TNAIQRPRLVAALQGKKVNRVACGSAHTLA 383
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 149/287 (51%), Gaps = 27/287 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE DG LG G + P+ +ES ++V ++A GG H+A V
Sbjct: 126 GEVYSWGEAE-DGKLG---------HGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 175
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G++++WG+ GRLGH D L PKL++AL + +ACG + T +T ++
Sbjct: 176 AAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVW 235
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G VP +++ L G+ V + CG + +T +G ++T+G G
Sbjct: 236 SWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V+ L+G + + A G H E G+++T
Sbjct: 293 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 340
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
WGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 341 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 387
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 114/227 (50%), Gaps = 20/227 (8%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
VT+ G+L+ G G G LG G +SVS P +ES++ + + A N
Sbjct: 68 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--------------N 113
Query: 258 SSSSNC----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
S +C S G++++WG+ + G+LGHG++ P + +L VA G + +
Sbjct: 114 SGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSAC 173
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTE 371
+T +G +YT G YG+LG+ ++ +L ++ L V +IACGS LT
Sbjct: 174 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT 233
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V++WG G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 234 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 280
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 109/222 (49%), Gaps = 14/222 (6%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG + V +P E+L LR V+ G AV
Sbjct: 19 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 69
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
+ GKL+ G G GRLG G E+ PT + ++ +VA G +AL++ G
Sbjct: 70 ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 126
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ G G+LG+ RV L V ++A G H A +T+ ++YTWGKG
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 228
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4046 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4105
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4106 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 4163
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G+ V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 4164 EDGKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4222
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4223 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4270
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4271 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4330
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 4331 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4389
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4390 RLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 203/415 (48%), Gaps = 46/415 (11%)
Query: 16 AVSSS-SQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAV 74
AVS+S + + + D V +WG + + GGL G K+ +P ++
Sbjct: 2968 AVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQL--GGLK------GSKV--KVPTFSQTIS 3017
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
L +IA G + +V++ G+V++ GE + GRLG GV +V P + L ++ VA
Sbjct: 3018 RLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVA 3077
Query: 135 C--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G H A+TL G +++WG+G G LGHGN + P+ V L + ++CG
Sbjct: 3078 VHSGGKHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGS 3134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAV 250
H+A ++S G+L+T+G G +G LGHGD + P+ V +L G R V+ ACG T A+
Sbjct: 3135 SHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G +F+WGDGD G+LG G E P + L ++ CG
Sbjct: 3195 TE------------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQF 3242
Query: 311 TVALTTSGHVYTMGSPVYGQLGN--------PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
++ALT +G V+T G Y +LG+ PQ G L R V +A G+ H
Sbjct: 3243 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALH 3294
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+T +VY WG +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3295 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 154/308 (50%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 4123 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLV 4182
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4183 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4239
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL V+
Sbjct: 4240 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKV 4299
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4300 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4347
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + SG VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4348 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4407
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4408 AHTLALST 4415
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E + V +IACG H+A +
Sbjct: 4155 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4204
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4264
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4265 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS SG+++
Sbjct: 4322 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 4368
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4369 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G +Y G+GT
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3047
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3048 N--GRLGLG--VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3103
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3104 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGELYTWGL 3151
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 3152 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3211
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3212 GRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3270
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3271 VRKPQPIGGLRGRRVIHVAVGALHCLAV 3298
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 29/306 (9%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
++ +AC +++++G++++W RL + + + ++ I +
Sbjct: 572 FQIKQVACCETQMLILSQEGKLYTW------RLAKPEAEPL---PMEEVAHDVFISIAGH 622
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
C H A+ + + Y+WG G + LGHG+ + VP ++ LE V S+ CG +
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 679
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+A +T G L T+G GT+ LGHG+ S+P V +L V A G
Sbjct: 680 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS---------- 729
Query: 255 VGNSSS-SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G++ S + S G +F WGDGD G+LG+G+ L P V +L P RV G +VA
Sbjct: 730 -GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVA 786
Query: 314 LTTSGHVYTMGSP--VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
L++ G +YT G + QL G R+ L + ++A H L+S E
Sbjct: 787 LSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGE 846
Query: 372 VYTWGK 377
V+ WG+
Sbjct: 847 VFGWGR 852
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4098
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4099 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +T+ V TWGK
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGK 4214
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4215 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4274
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4275 GRGGSDGCKLPYK 4287
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 20/210 (9%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG G+ RLGHGD A+ VPT +AAL + V CG S + A+T G++ T G Y
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 697
Query: 329 GQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGH 385
+LG+ +D + LP V LS V ++A GS H LTS+ V+ WG G G+LG+
Sbjct: 698 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 756
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG-------VDQSMCSG 434
G+ + P LVE+L +V+ + G+ F+ A+ L+ W V++S+ G
Sbjct: 757 GNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSV-QG 813
Query: 435 CRLP--FNNFKRKRHNCYNCGLVFCHSCSS 462
C +P ++ + KR + C + SS
Sbjct: 814 CSVPRLVSSLQHKRIVDVAVSVAHCLALSS 843
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 40/272 (14%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
VQ++ CG ++A + G + +WG + RLGHG D P L+ ALS+ + VA
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS------ 189
G+ H+ A+T G ++ WGDG Y G LG+GN NG L+ I V S+
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRVF 778
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSV---SIPREVESLKGLRTVRAACGVW 245
G + ++S GQL+T+G T LGH +SV S+PR V SL+ R V A V
Sbjct: 779 AGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 836
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-- 303
H A+ SSG++F WG D ++ ++ + + P F
Sbjct: 837 HCLAL------------SSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASG 884
Query: 304 VACGHSLTVALTTSGHV-YTMGSPVYGQLGNP 334
+AC + ++ T S H +P LG P
Sbjct: 885 IACTSAQSLVWTQSSHQGVPRRAPFVVDLGEP 916
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK++ G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 3038 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G GRL
Sbjct: 3098 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3157
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL ++V +ACG+ + L
Sbjct: 3158 GHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CGHSLTVALTTSGHVYTM 323
GKL+TW RL + E P + + F +A C +A+ ++ + Y+
Sbjct: 591 GKLYTW------RLAKPEAE----PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSW 640
Query: 324 GSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G+ +LG+ + +P ++ L + V+ + CG + A +T + TWG+G R
Sbjct: 641 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 699
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
LGHG++DDR+ P+LV AL D V +A G+ ++ L
Sbjct: 700 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2131
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 207/432 (47%), Gaps = 79/432 (18%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG G + G N + + ++ P ++ Q + CG ++
Sbjct: 1123 DVFLWGAGRHGQLAEAGRN-------ILVPTTAPSFSQA------QQVVCGQNCTFVIQP 1169
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELV-ACG-EYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ +I AL + +LV +CG + H+ A+T SG+++
Sbjct: 1170 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1229
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI---------------------- 188
+WGDG Y G LGHGN P+++ L+G V +
Sbjct: 1230 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQ 1286
Query: 189 -SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR---TVRAACGV 244
SCG H+AVVT+ G+LFTFG+G +G LG G+ + +P V +L+G + ACG+
Sbjct: 1287 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGL 1346
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTW--GDGDKGRLGHGDKEAKLVPTCVAALVE-PNF 301
HT V S+ + W GDGD G+LG G+ AK P A +++ P
Sbjct: 1347 NHTLVV-------------SADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393
Query: 302 C--------------RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG- 346
C +VACG +VALT G V+T G +G P++ + NR +
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNHNRPQQL 1451
Query: 347 -KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQV 405
LS V+++A G+ H L+S +VY WG + G+LG G T+ P++V L+ K +
Sbjct: 1452 PALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHI 1511
Query: 406 KSIACGTNFTAA 417
++ G +AA
Sbjct: 1512 HQVSAGRCHSAA 1523
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 166/368 (45%), Gaps = 63/368 (17%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+VF WG G+L ++L P + S + V CG+ T + +G + G+G
Sbjct: 1123 DVFLWGAGRHGQLAEA-GRNILVPTTAPSFSQA--QQVVCGQNCTFVIQPNGTVLACGEG 1179
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGP-WHTAVVTSAGQLFTFGDGTF 212
+Y G LG GN V ++ L+G V+ + SCG H+ +T +G++F++GDG +
Sbjct: 1180 SY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1236
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTV-----RAA------------------CGVWHTAA 249
G LGHG+ PR++E+L+G V RAA CG H+A
Sbjct: 1237 GKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAV 1296
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF---CRVAC 306
V + GKLFT+G+GD GRLG G+ K +P VAAL VAC
Sbjct: 1297 VT------------ADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVAC 1344
Query: 307 GHSLTVALTTSGH-VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS-------------- 351
G + T+ ++ G V+ G YG+LG + K +V + +S
Sbjct: 1345 GLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCG 1404
Query: 352 -FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
++++ACG+ LT V+T+G+ L + N P + AL V+ +A
Sbjct: 1405 ISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDVAV 1464
Query: 411 GTNFTAAI 418
G T A+
Sbjct: 1465 GAEHTLAL 1472
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 59/345 (17%)
Query: 69 ALESAVVLDVQNIACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL-- 125
AL+ VV + +CG H+ + + GEVFSWG+ G+LGHG P+ I+AL
Sbjct: 1200 ALQGFVVTQLVT-SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQG 1258
Query: 126 --------------------SNMNIEL-VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 164
S++++ L ++CG H+ VT G L+T+G+G Y G LG
Sbjct: 1259 EEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNGDY--GRLGL 1316
Query: 165 GNEVSHWVPKRVNGPLEGIH---VSSISCGPWHTAVVTSAGQL-FTFGDGTFGVLGHGDR 220
GN + +P+RV LEG V++++CG HT VV++ G + + FGDG +G LG G+
Sbjct: 1317 GNTSNKKLPERVAA-LEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 1375
Query: 221 KSVSIPR---------------EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+ S P+ +V+ L G+ + ACG + A+ +
Sbjct: 1376 TAKSSPQVWAVILQSPTLCQELKVDVLCGISIKKVACGTQFSVALTK------------D 1423
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G++FT+G L P + AL + VA G T+AL+++G VY GS
Sbjct: 1424 GRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGS 1483
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
GQLG + V L + +++ G H A T+ +
Sbjct: 1484 NSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCHSAAWTAPS 1528
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+F WG G G+L + LVPT + + +V CG + T + +G V G
Sbjct: 1124 VFLWGAGRHGQLAEAGRNI-LVPTTAPSFSQAQ--QVVCGQNCTFVIQPNGTVLACGEGS 1180
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEI--ACGSY-HVAVLTSKTEVYTWGKGANGRLG 384
YG+LG +D V L V ++ +CGS H LT EV++WG G G+LG
Sbjct: 1181 YGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLG 1240
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
HG++D + P +EAL+ ++V + G A +C
Sbjct: 1241 HGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLC 1275
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ L + + VQ++A G H ++ G+V++WG S G+LG G + V P ++ L
Sbjct: 1448 PQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQ 1507
Query: 127 NMNIELVACGEYHTCAVT 144
+I V+ G H+ A T
Sbjct: 1508 GKHIHQVSAGRCHSAAWT 1525
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 175 bits (443), Expect = 8e-41, Method: Composition-based stats.
Identities = 121/433 (27%), Positives = 208/433 (48%), Gaps = 100/433 (23%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE-----SAVVLDVQNIACGGRH 87
G++F WG+ G LG GL+ +G + PK LE S +++ + CGG H
Sbjct: 1237 GELFTWGKNQ-SGQLGHGLD-IGKI------QTTPKRLEFFRGKSPIIM----VECGGEH 1284
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
+ V+ V+SWG++ G+LGHG S PK+I+ +S I+ +A G HT + S
Sbjct: 1285 SICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKS 1344
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIH-----VSSISCGPWHTAVVTS 200
G+LY++G G + G LGHG+ VS +P R+ + GI ++ I+CG H+ + +
Sbjct: 1345 GELYSFGYG--DQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSD 1402
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+++++G G G LGHG+ +S++ PR +E+LKG+ + +CG ++T A ++
Sbjct: 1403 NGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATTDLK------ 1454
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+++WG G+ +LGHG + + P V ++ N ++ CG + T+ LT G +
Sbjct: 1455 ------NVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDL 1508
Query: 321 -----------------------------------------------------YTMGSPV 327
Y G+
Sbjct: 1509 NNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGE 1568
Query: 328 YGQLG------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
+G+LG +P D +P ++G + + + +I+CG+ A++TS +Y WG G G
Sbjct: 1569 HGKLGLGGDLKSPFFDKPIPTAIKGVNALNLI-DISCGTDFTAMITSNGALYVWGYGNFG 1627
Query: 382 RLGHGDTDDRNSP 394
++G+G TDD P
Sbjct: 1628 QIGNGKTDDAWVP 1640
Score = 152 bits (385), Expect = 5e-34, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 18/293 (6%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMN-IELVACGE 137
++CG H AL+++ GE+F+WG+ G+LGHG+D + PK ++ + I +V CG
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGG 1282
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ V +Y+WG FG LGHG + VS PK + + G + +I+ G HT
Sbjct: 1283 EHSICVDSDYVVYSWGQD--KFGQLGHGTKSVSQNRPKIIED-ISGQKIQAIAAGFAHTI 1339
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA-VVEVMV 255
V+ +G+L++FG G G LGHG S SIP +E L T+ G+ H + ++
Sbjct: 1340 VLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIE----LNTI---VGIQHGGGKITQIAC 1392
Query: 256 GNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G S CS +G++++WG G +G+LGHG+ E+ P + AL +++CGH T+A
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEAL--KGVTKISCGHFYTMAT 1450
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
T +VY+ G + +LG+ + RV + V +I CG H LT
Sbjct: 1451 TDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503
Score = 135 bits (341), Expect = 6e-29, Method: Composition-based stats.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 36/301 (11%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS--HWVPKRVNGPLEGIHVSSISC 190
V+CG H ++ SG+L+TWG G LGHG ++ PKR+ + + C
Sbjct: 1223 VSCGWDHVALISESGELFTWGKNQS--GQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVEC 1280
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI--PREVESLKGLRTVRAACGVWHTA 248
G H+ V S ++++G FG LGHG KSVS P+ +E + G + A G HT
Sbjct: 1281 GGEHSICVDSDYVVYSWGQDKFGQLGHGT-KSVSQNRPKIIEDISGQKIQAIAAGFAHTI 1339
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-------- 300
+ + SG+L+++G GD+G+LGHG +K +PT +E N
Sbjct: 1340 VLKK------------SGELYSFGYGDQGQLGHGSFVSKSIPT----RIELNTIVGIQHG 1383
Query: 301 ---FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
++ACG +V + +G VY+ G GQLG+ + R+ L V +I+
Sbjct: 1384 GGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKIS 1441
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
CG ++ T VY+WG G + +LGHG + +P +V+ K V I CG N T
Sbjct: 1442 CGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTIT 1501
Query: 418 I 418
+
Sbjct: 1502 L 1502
Score = 68.9 bits (167), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---PNRVEGKLSKSFVE 354
E +V+CG ++ SG ++T G GQLG+ GK+ P R+E KS +
Sbjct: 1217 EKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPII 1276
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD-DRNSPSLVEALKDKQVKSIACGTN 413
+ CG H + S VY+WG+ G+LGHG +N P ++E + +++++IA G
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAG-- 1334
Query: 414 FTAAICLHK 422
F I L K
Sbjct: 1335 FAHTIVLKK 1343
Score = 50.4 bits (119), Expect = 0.003, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 97 VFSWGEESGGRLGHGVD-----SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+++ G G+LG G D D P I ++ +N+ ++CG T +T +G LY
Sbjct: 1561 IYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYV 1620
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRV 176
WG G NFG +G+G WVP R+
Sbjct: 1621 WGYG--NFGQIGNGKTDDAWVPIRI 1643
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/280 (41%), Positives = 152/280 (54%), Gaps = 19/280 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELVACGEYHTCAVTLSGDLYTWGDG 155
VFSWG G+LG G SD P +DAL + I V CG YHT AV +GDLYTWG G
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
Y G LGHGNE H P+RV L G+ + I+CG HTAVVTS G L+T+GD GV
Sbjct: 61 MY--GKLGHGNESGHSTPRRVE-ALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117
Query: 216 GHGDRKSVSI-PREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
GHGD + P+ +E L G + V+ +ACG +HTA + + + F WG+
Sbjct: 118 GHGDTEGHQYTPKLLERLNGKKVVQLSACG-FHTACLTD------------DHETFAWGE 164
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G GRLG+G + P + +L+ C+VACG + +T G +YT G +GQLG+
Sbjct: 165 GKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH 224
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
KL + L V++I CG H LTS+ E +
Sbjct: 225 ADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 150/290 (51%), Gaps = 25/290 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAV-VLDVQNIACGGRHAALVNK 93
VF WG G DG LG G D P +++ V + ++ CG H A V
Sbjct: 1 VFSWGRGE-DGQLG---------IGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVAS 50
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++++WG G+LGHG +S P+ ++AL ++I +ACG HT VT G LYTWG
Sbjct: 51 NGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWG 110
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
D G+ GHG+ H ++ L G V +S +HTA +T + F +G+G FG
Sbjct: 111 D--KENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFG 168
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG+G ++ PR +ESL G + ACG +H+A + GK++T+G
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITR------------DGKMYTFGG 216
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G+ G+LGH DK KL PT V AL ++ CG S +VALT+ G + +
Sbjct: 217 GEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYHLV 266
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 146/274 (53%), Gaps = 21/274 (7%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV-SSISCGPWHTAVVTSAGQLFTF 207
+++WG G G LG G+ P V+ L G+ + + ++CG +HTA V S G L+T+
Sbjct: 1 VFSWGRG--EDGQLGIGDTSDQDEPTYVD-ALRGVGIITHVTCGSYHTAAVASNGDLYTW 57
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G G +G LGHG+ S PR VE+L GL V ACG HTA V S G
Sbjct: 58 GGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVT------------SKGC 105
Query: 268 LFTWGDGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRV-ACGHSLTVALTTSGHVYTMGS 325
L+TWGD + G GHGD E + P + L ++ ACG T LT + G
Sbjct: 106 LYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFH-TACLTDDHETFAWGE 164
Query: 326 PVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+G+LGN + + P +E + K + ++ACG +H AV+T ++YT+G G +G+LG
Sbjct: 165 GKFGRLGNGTERNCHSPRLIESLIGK-YPCQVACGGFHSAVITRDGKMYTFGGGEHGQLG 223
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H D ++ P+LVEAL VK I CG + + A+
Sbjct: 224 HADKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 320 VYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G GQLG +D P V+ + + CGSYH A + S ++YTWG G
Sbjct: 1 VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKW 423
G+LGHG+ ++P VEAL + IACG+ TA + CL+ W
Sbjct: 61 MYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 169/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF GEGT +G LG +G V + LP L VV V + GG+HA +
Sbjct: 2964 GKVFACGEGT-NGRLG-----LGVTHNVPLPHQLP-VLHQYVVKKVA-VHSGGKHALALT 3015
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG + + P+L++AL I +ACG H+ A++ G+LYTW
Sbjct: 3016 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTW 3075
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 3076 GLGEY--GRLGHGDNATQLKPKLVTA-LCGSRVIQVACGSRDAQTLALTEDGAVFSWGDG 3132
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + + P E+E L G+ V+ CG + A+ +G+++T
Sbjct: 3133 DFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 3180
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + P +A L VA G +A+T +G VY G +GQ
Sbjct: 3181 WGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3240
Query: 331 LGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K P V G L FV +ACGS H
Sbjct: 3241 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3272
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 177/343 (51%), Gaps = 21/343 (6%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GE 137
+IA G + +V++ G+VF+ GE + GRLG GV +V P + L ++ VA G
Sbjct: 2949 HIAGGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 3008
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+TL G +++WG+G G LGHGN + P+ V L + I+CG H+A
Sbjct: 3009 KHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDIACGSSHSAA 3065
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMV 255
++S G+L+T+G G +G LGHGD + P+ V +L G R ++ ACG T A+ E
Sbjct: 3066 ISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTE--- 3122
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +F+WGDGD G+LG G E P + L ++ CG ++ALT
Sbjct: 3123 ---------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALT 3173
Query: 316 TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
+G V+T G Y +LG+ + P + G L V +A G+ H +T +VY
Sbjct: 3174 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYA 3232
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
WG +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3233 WGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4067 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4126
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4127 TGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEG-- 4184
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK + L G+ V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 4185 EDGKLGHGNRLSYDRPKLLEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4243
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4244 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4291
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4292 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4351
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 4352 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRP 4410
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4411 RLVAALQGKHIVKVTCGSAHTLAL 4434
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
S+P L S + V+ +A GG+H + GEV++WGE G+LGHG PKL+
Sbjct: 4144 SIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLL 4203
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4204 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4260
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 4261 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 4320
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4321 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4368
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + +G VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4369 IISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4428
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4429 AHTLALST 4436
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR + PK LE + V +IACG H+A +
Sbjct: 4176 GEVYAWGEGE-DGKLGHG-NR--------LSYDRPKLLEHLNGMSVADIACGSAHSAAIT 4225
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4226 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4285
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4286 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4342
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS +G+++
Sbjct: 4343 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDAGEVY 4389
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4390 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4437
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G ++ G+GT
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVFACGEGT 2973
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 2974 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3030 KLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAI------------SSQGELYTWGL 3077
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 3078 GEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3137
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3138 GRGGSEGSATPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3196
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3197 VRKPQPIAGLRGRRVIHVAVGALHCLAV 3224
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 30/311 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACG 136
V+ +AC L++K+G++++W +D D+ I S+ C
Sbjct: 597 VKQVACSKDIVLLLSKEGKLYNWHISKPDTEPQPLDFGDIGSETFISIASH-------CE 649
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H AV + + Y+WG G LGHG+ S +P ++ + V S+ CG ++A
Sbjct: 650 GRHFLAVDNNFNAYSWGTGDNRR--LGHGDCHSRELPTKIESLVR--RVKSVYCGCSYSA 705
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVM 254
+T G L+T+G G +G LGHG +P V +LK + V A G HT +
Sbjct: 706 AITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT--- 762
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ G ++ WGDGD G+LG+ + L P + L P RV G ++AL
Sbjct: 763 ---------NEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL--PRVQRVFAGSQFSLAL 811
Query: 315 TTSGHVYTMG--SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
T G +Y+ G S + QL G R+ L + ++A G H L+S E+
Sbjct: 812 TGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEI 871
Query: 373 YTWGKGANGRL 383
+ WG+ N ++
Sbjct: 872 FGWGRNDNQQI 882
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 118/252 (46%), Gaps = 24/252 (9%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4069 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4119
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4120 ---PDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4176
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY G G+LG+ ++ L+ V +IACGS H A +T+ V TWGKG
Sbjct: 4177 EVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4236
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------VD 428
GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4237 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4296
Query: 429 QSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4297 RGGSDGCKLPYK 4308
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 26/220 (11%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
LP +ES +V V+++ CG ++A + +G +++WG + GRLGHG+ D P ++ AL
Sbjct: 683 LPTKIES-LVRRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMAL 741
Query: 126 SNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+ + VA G+ HT +T G +Y WGDG Y G LG+ + S P +
Sbjct: 742 KDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY--GKLGNASCNSSLQPLLIECL---P 796
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG----DRKSVSIPREVESLKGLRTVR 239
V + G + +T GQL+++G + LGH + + S+PR + SL+ R V
Sbjct: 797 RVQRVFAGSQFSLALTGEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIVD 854
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
A GV H A+ S+G++F WG D ++
Sbjct: 855 VAVGVTHCLAL------------SSAGEIFGWGRNDNQQI 882
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 19/209 (9%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG GD RLGHGD ++ +PT + +LV V CG S + A+T G++YT G Y
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNY 721
Query: 329 GQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGH 385
G+LG+ +D + LP V L V ++A GS H LT++ VY WG G G+LG+
Sbjct: 722 GRLGHGISDDQCLPTMVMA-LKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG------VDQSMCSGC 435
+ P L+E L +V+ + G+ F+ A+ L+ W + + GC
Sbjct: 781 ASCNSSLQPLLIECL--PRVQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGC 838
Query: 436 RLP--FNNFKRKRHNCYNCGLVFCHSCSS 462
+P + + KR G+ C + SS
Sbjct: 839 SVPRLITSLQHKRIVDVAVGVTHCLALSS 867
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 80/157 (50%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK+F G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 2964 GKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3023
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + +IACGS H A ++S+ E+YTWG G GRL
Sbjct: 3024 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRL 3083
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL +V +ACG+ + L
Sbjct: 3084 GHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLAL 3120
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 1794 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 1853
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 1854 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 1911
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G+ V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 1912 EDGKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 1970
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 1971 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 2018
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 2019 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 2078
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 2079 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 2137
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 2138 RLVAALQGKHIVKVTCGSAHTLAL 2161
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 175/342 (51%), Gaps = 19/342 (5%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GE 137
+IA G + +V++ G+V++ GE + GRLG GV +V P + L ++ VA G
Sbjct: 769 HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 828
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+TL G +++WG+G G LGHGN + P+ V L + ++CG H+A
Sbjct: 829 KHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAA 885
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMV 255
++S G+L+T+G G +G LGHGD + P+ V +L G R V+ ACG T A+ E
Sbjct: 886 ISSQGELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTE--- 942
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +F+WGDGD G+LG G E P + L ++ CG ++ALT
Sbjct: 943 ---------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 993
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
+G V+T G Y +LG+ + G L V +A G+ H +T +VY W
Sbjct: 994 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAW 1053
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 1054 GDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 167/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GEGT +G LG +G V + LP L VV V + GG+HA +
Sbjct: 784 GKVYACGEGT-NGRLG-----LGVTHNVPLPHQLP-VLHQYVVKKVA-VHSGGKHALALT 835
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG + + P+L++AL I VACG H+ A++ G+LYTW
Sbjct: 836 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 895
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 896 GLGEY--GRLGHGDNATQLKPKLVTA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 952
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + P E+E L G+ V+ CG + A+ +G+++T
Sbjct: 953 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 1000
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + P + L VA G +A+T +G VY G +GQ
Sbjct: 1001 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 1060
Query: 331 LGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K P V G L FV +ACGS H
Sbjct: 1061 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 1092
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 154/308 (50%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 1871 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLV 1930
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 1931 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 1987
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL V+
Sbjct: 1988 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKV 2047
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 2048 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 2095
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + SG VYT G GQLG+ R+ L + ++ CGS
Sbjct: 2096 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 2155
Query: 361 YHVAVLTS 368
H L++
Sbjct: 2156 AHTLALST 2163
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E + V +IACG H+A +
Sbjct: 1903 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMSVADIACGSAHSAAIT 1952
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 1953 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 2012
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 2013 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 2069
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS SG+++
Sbjct: 2070 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 2116
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 2117 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 2164
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G +Y G+GT
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 793
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 794 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 850 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGELYTWGL 897
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 898 GEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 957
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 958 GRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 1016
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 1017 VRKPQPIGGLRGRRVIHVAVGALHCLAV 1044
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 1796 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 1846
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 1847 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 1903
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +T+ V TWGK
Sbjct: 1904 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGK 1962
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 1963 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 2022
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 2023 GRGGSDGCKLPYK 2035
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK++ G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 784 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 843
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G GRL
Sbjct: 844 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 903
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL ++V +ACG+ + L
Sbjct: 904 GHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLAL 940
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 4042 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 4101
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 4102 TGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 4159
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G+ V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 4160 EDGKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 4218
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 4219 GDSEDQLRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 4266
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT G + +LG+
Sbjct: 4267 YGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGS 4326
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 4327 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 4385
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 4386 RLVAALQGKHIVKVTCGSAHTLAL 4409
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 168/333 (50%), Gaps = 27/333 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GEGT +G LG +G V + LP L VV V + GG+HA +
Sbjct: 3035 GKVYACGEGT-NGRLG-----LGVTHNVPLPHQLP-VLHQYVVKKV-AVHSGGKHALALT 3086
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGHG + + P+L++AL I VACG H+ A++ G+LYTW
Sbjct: 3087 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTW 3146
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ V+ PK V L G V ++CG T +T G +F++GDG
Sbjct: 3147 GLGEY--GRLGHGDNVTQLKPKLVVA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWGDG 3203
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + P E+E L G+ V+ CG + A+ +G+++T
Sbjct: 3204 DFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR------------AGEVWT 3251
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD RLGHG + P + L VA G +A+T +G VY G +GQ
Sbjct: 3252 WGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQ 3311
Query: 331 LGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYH 362
G+ K P V G L FV +ACGS H
Sbjct: 3312 QGSGNTFVNKKPALVIG-LDAVFVNRVACGSSH 3343
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 177/350 (50%), Gaps = 35/350 (10%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GE 137
+IA G + +V++ G+V++ GE + GRLG GV +V P + L ++ VA G
Sbjct: 3020 HIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGG 3079
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+TL G +++WG+G G LGHGN + P+ V L + ++CG H+A
Sbjct: 3080 KHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAA 3136
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMV 255
++S G+L+T+G G +G LGHGD + P+ V +L G R V+ ACG T A+ E
Sbjct: 3137 ISSQGELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTE--- 3193
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +F+WGDGD G+LG G E P + L ++ CG ++ALT
Sbjct: 3194 ---------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALT 3244
Query: 316 TSGHVYTMGSPVYGQLGN--------PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+G V+T G Y +LG+ PQ G L R V +A G+ H +T
Sbjct: 3245 RAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALHCLAVT 3296
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+VY WG +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 3297 DAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 154/308 (50%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 4119 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLV 4178
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 4179 EHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLG 4235
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL V+
Sbjct: 4236 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKV 4295
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TWG GD RLGHG + P VAAL
Sbjct: 4296 ECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 4343
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + SG VYT G GQLG+ R+ L + ++ CGS
Sbjct: 4344 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 4403
Query: 361 YHVAVLTS 368
H L++
Sbjct: 4404 AHTLALST 4411
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E + V +IACG H+A +
Sbjct: 4151 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMSVADIACGSAHSAAIT 4200
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L PKL++AL +ACG + T +T +++
Sbjct: 4201 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4260
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+G G
Sbjct: 4261 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4317
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS SG+++
Sbjct: 4318 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 4364
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 4365 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4412
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G +Y G+GT
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 3044
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 3045 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 3101 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGELYTWGL 3148
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 3149 GEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 3208
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 3209 GRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 3267
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 3268 VRKPQPIGGLRGRRVIHVAVGALHCLAV 3295
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 31/307 (10%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
++ +AC +++++G++++W RL P ++ +++ +A
Sbjct: 569 FQIKQVACCETQMLILSQEGKLYTW------RLA----KPEAEPLPMEEVAHEVFISIAG 618
Query: 135 -CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
C H A+ + + Y+WG G + LGHG+ + VP ++ LE V S+ CG
Sbjct: 619 HCEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCS 675
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
++A +T G L T+G GT+ LGHG+ S+P V +L V A G
Sbjct: 676 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS--------- 726
Query: 254 MVGNSSS-SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G++ S + S G +F WGDGD G+LG+G+ L P V +L P RV G ++
Sbjct: 727 --GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSL 782
Query: 313 ALTTSGHVYTMGSP--VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
AL++ G +Y+ G + QL G R+ L + ++A H L+S
Sbjct: 783 ALSSEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSG 842
Query: 371 EVYTWGK 377
EV+ WG+
Sbjct: 843 EVFGWGR 849
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 4044 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4094
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 4095 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4151
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +T+ V TWGK
Sbjct: 4152 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGK 4210
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 4211 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4270
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 4271 GRGGSDGCKLPYK 4283
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 20/210 (9%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG G+ RLGHGD A+ VPT +AAL + V CG S + A+T G++ T G Y
Sbjct: 635 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 694
Query: 329 GQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGH 385
+LG+ +D + LP V LS V ++A GS H LTS+ V+ WG G G+LG+
Sbjct: 695 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 753
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG-------VDQSMCSG 434
G+ + P LVE+L +V+ + G+ F+ A+ L+ W V++S+ G
Sbjct: 754 GNCNGSLQPILVESL--PRVQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVERSV-QG 810
Query: 435 CRLP--FNNFKRKRHNCYNCGLVFCHSCSS 462
C +P ++ + KR + C + SS
Sbjct: 811 CSVPRLVSSLQHKRIVDVAVSVAHCLALSS 840
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 40/272 (14%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
VQ++ CG ++A + G + +WG + RLGHG D P L+ ALS+ + VA
Sbjct: 667 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 726
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS------ 189
G+ H+ A+T G ++ WGDG Y G LG+GN NG L+ I V S+
Sbjct: 727 GDAHSLALTSEGLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRVF 775
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSV---SIPREVESLKGLRTVRAACGVW 245
G + ++S GQL+++G T LGH +SV S+PR V SL+ R V A V
Sbjct: 776 AGSQFSLALSSEGQLYSWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 833
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-- 303
H A+ SSG++F WG D ++ ++ + + P F
Sbjct: 834 HCLAL------------SSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASG 881
Query: 304 VACGHSLTVALTTSGHV-YTMGSPVYGQLGNP 334
+AC + ++ T S H +P LG P
Sbjct: 882 IACTSAQSLVWTQSSHQGVPRRAPFVVDLGEP 913
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK++ G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 3035 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 3094
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G GRL
Sbjct: 3095 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 3154
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL ++V +ACG+ + L
Sbjct: 3155 GHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLAL 3191
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CGHSLTVALTTSGHVYTM 323
GKL+TW RL + E P + + F +A C +A+ ++ + Y+
Sbjct: 588 GKLYTW------RLAKPEAE----PLPMEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSW 637
Query: 324 GSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G+ +LG+ + +P ++ L + V+ + CG + A +T + TWG+G R
Sbjct: 638 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 696
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
LGHG++DDR+ P+LV AL D V +A G+ ++ L
Sbjct: 697 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 734
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 162/301 (53%), Gaps = 15/301 (4%)
Query: 119 PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P L++++ +++I+ VA G H A++ G++++WG+ G LGHGN S P RV
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEA--EDGKLGHGNRNSCDRP-RV 434
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L G V I+ G H+A +TS G+LFT+G G +G LGHGD + P+ VE+LKG+R
Sbjct: 435 IESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVR 494
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ ACG + + + + S +++WGDGD G+LG G + +P V AL
Sbjct: 495 VIDVACG---SGDAQTLCITDDDS-------VWSWGDGDYGKLGRGGSDGCKIPQKVEAL 544
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEI 356
+ +V CG +VALT SG VYT G Y +LG+ D R L V I
Sbjct: 545 IGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVISI 604
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A GS H T + EV+TWG G+LG G T P LV AL+ K++ +ACG+ +
Sbjct: 605 ATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSL 664
Query: 417 A 417
A
Sbjct: 665 A 665
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 158/308 (51%), Gaps = 32/308 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WGE DG LG G NR SC P+ +ES +V +IA GG H+A +
Sbjct: 408 GEVFSWGEAE-DGKLGHG-NR-NSC-------DRPRVIESLRGKEVVDIAAGGAHSACIT 457
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
GE+F+WG+ GRLGHG D + PKL++AL + + VACG + T +T ++
Sbjct: 458 STGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVW 517
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P++V L G V + CG + +T +G ++T+G G
Sbjct: 518 SWGDGDY--GKLGRGGSDGCKIPQKVEA-LIGQGVVKVECGSQFSVALTKSGCVYTWGKG 574
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG V PR+V +L+G + A G H A + G++FT
Sbjct: 575 DYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTD------------QGEVFT 622
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV--- 327
WGD D+G+LG G A P VAAL RVACG + ++A +TS V PV
Sbjct: 623 WGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSLAWSTSKPVNAGKLPVQVP 682
Query: 328 --YGQLGN 333
Y L N
Sbjct: 683 MEYNHLQN 690
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 123/268 (45%), Gaps = 42/268 (15%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV---------- 250
+GQ++ +G G LG + V +P ++L LR V+ G AV
Sbjct: 307 SGQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAGGR 366
Query: 251 ----------------------VEVMVGNSSSSNC----SSGKLFTWGDGDKGRLGHGDK 284
++ + NS +C S G++F+WG+ + G+LGHG++
Sbjct: 367 LGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNR 426
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
+ P + +L +A G + + +T++G ++T G YG+LG+ ++ ++ ++
Sbjct: 427 NSCDRPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKL 486
Query: 345 EGKLSKSFVEEIACGSYHVAVL--TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
L V ++ACGS L T V++WG G G+LG G +D P VEAL
Sbjct: 487 VEALKGVRVIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIG 546
Query: 403 KQVKSIACGTNFTAAI----CLHKWVSG 426
+ V + CG+ F+ A+ C++ W G
Sbjct: 547 QGVVKVECGSQFSVALTKSGCVYTWGKG 574
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/355 (32%), Positives = 182/355 (51%), Gaps = 37/355 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E L V IAC + ++++ G V++ +SD L P+L+ L+
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 688
Query: 127 NMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLE 181
+ NI +A +H A+ +G++Y+WG G + G LGHG+ V PK ++ G
Sbjct: 689 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 746
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G HV I+CG ++A +T+ G+L+T+G G +G LGHG + +IP V LKGL+ + A
Sbjct: 747 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 806
Query: 242 CGV--WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CG T AV E +G++++WGDGD G+LG G + P + L +
Sbjct: 807 CGSGDAQTLAVTE------------NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 854
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIAC 358
+ +V CG ++ALT G VY+ G +LG+ + + P +EG K ++ +A
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 913
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQVKSIACG 411
GS H LT +EV++WG +N + H DT + PS + L K + IACG
Sbjct: 914 GSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 621 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 672
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G I +++ S G H + + G+++++G G G
Sbjct: 673 AYNSDTL---------APQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 722
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 723 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 770
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 771 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 830
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 831 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 889
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 890 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 930
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 139/296 (46%), Gaps = 37/296 (12%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES----A 73
+ H DG A G+V+ WG G G R+G V ++ PK + +
Sbjct: 696 AAHSDGHHYLALAATGEVYSWGCGDG--------GRLGHGDTVPLEE--PKVISAFSGKQ 745
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + + V
Sbjct: 746 AGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDV 805
Query: 134 AC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
AC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V + CG
Sbjct: 806 ACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCG 862
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ +T GQ++++G G LGHG + V P+ +E L+G + + A G H A+
Sbjct: 863 SQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 922
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
E ++ +WG D+ + + K P+ + L + +ACG
Sbjct: 923 E------------DSEVHSWGSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G L R GS G K PK +E LDV + CG + + +
Sbjct: 821 GQVWSWGDGDY-----GKLGRGGS-DGCKT----PKLIEKLQDLDVVKVRCGSQFSIALT 870
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+V+SWG+ RLGHG + V +PKL++ L + VA G H A+T ++++W
Sbjct: 871 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 930
Query: 153 G--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G D +F L V+ P + G L+ H+ I+CGP
Sbjct: 931 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGP 967
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 203/415 (48%), Gaps = 46/415 (11%)
Query: 16 AVSSS-SQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAV 74
AVS+S + + + D V +WG + + GGL G K+ +P ++
Sbjct: 2623 AVSTSHEEAAAAPEQDLPCTVMVWGLNDKEQL--GGLK------GSKV--KVPTFSQTIS 2672
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
L +IA G + +V++ G+V++ GE + GRLG GV +V P + L ++ VA
Sbjct: 2673 RLRPIHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVA 2732
Query: 135 C--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G H A+TL G +++WG+G G LGHGN + P+ V L + ++CG
Sbjct: 2733 VHSGGKHALALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGS 2789
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAV 250
H+A ++S G+L+T+G G +G LGHGD + P+ V +L G R V+ ACG T A+
Sbjct: 2790 SHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 2849
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G +F+WGDGD G+LG G E P + L ++ CG
Sbjct: 2850 TE------------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQF 2897
Query: 311 TVALTTSGHVYTMGSPVYGQLGN--------PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
++ALT +G V+T G Y +LG+ PQ G L R V +A G+ H
Sbjct: 2898 SLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR--------RVIHVAVGALH 2949
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+T +VY WG +G+ G G+T P+LV L V +ACG++ + A
Sbjct: 2950 CLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3004
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 164/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V+ G +Y G+GT
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVSQDGKVYACGEGT 2702
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 2703 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 2758
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 2759 KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI------------SSQGELYTWGL 2806
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P V AL +VACG + T+ALT G V++ G +G+L
Sbjct: 2807 GEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKL 2866
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 2867 GRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 2925
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 2926 VRKPQPIGGLRGRRVIHVAVGALHCLAV 2953
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 29/306 (9%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA- 134
++ +AC +++++G++++W RL + + + ++ I +
Sbjct: 226 FQIKQVACCETQMLILSQEGKLYTW------RLAKPEAEPL---PMEEVAHDVFISIAGH 276
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
C H A+ + + Y+WG G + LGHG+ + VP ++ LE V S+ CG +
Sbjct: 277 CEGRHFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSY 333
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+A +T G L T+G GT+ LGHG+ S+P V +L V A G
Sbjct: 334 SAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS---------- 383
Query: 255 VGNSSS-SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G++ S + S G +F WGDGD G+LG+G+ L P V +L P RV G +VA
Sbjct: 384 -GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVA 440
Query: 314 LTTSGHVYTMGSP--VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
L++ G +YT G + QL G R+ L + ++A H L+S E
Sbjct: 441 LSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGE 500
Query: 372 VYTWGK 377
V+ WG+
Sbjct: 501 VFGWGR 506
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 20/210 (9%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
++WG G+ RLGHGD A+ VPT +AAL + V CG S + A+T G++ T G Y
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTY 351
Query: 329 GQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGH 385
+LG+ +D + LP V LS V ++A GS H LTS+ V+ WG G G+LG+
Sbjct: 352 ARLGHGNSDDRSLPTLVVA-LSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGN 410
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG-------VDQSMCSG 434
G+ + P LVE+L +V+ + G+ F+ A+ L+ W V++S+ G
Sbjct: 411 GNCNGSLQPILVESL--PRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVERSV-QG 467
Query: 435 CRLP--FNNFKRKRHNCYNCGLVFCHSCSS 462
C +P ++ + KR + C + SS
Sbjct: 468 CSVPRLVSSLQHKRIVDVAVSVAHCLALSS 497
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 126/274 (45%), Gaps = 48/274 (17%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
VQ++ CG ++A + G + +WG + RLGHG D P L+ ALS+ + VA
Sbjct: 324 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 383
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS------ 189
G+ H+ A+T G ++ WGDG Y G LG+GN NG L+ I V S+
Sbjct: 384 GDAHSLALTSEGLVFAWGDGDY--GKLGNGN---------CNGSLQPILVESLPRVQRVF 432
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSV---SIPREVESLKGLRTVRAACGVW 245
G + ++S GQL+T+G T LGH +SV S+PR V SL+ R V A V
Sbjct: 433 AGSQFSVALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVA 490
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-- 303
H A+ SSG++F WG D ++ ++ + + P F
Sbjct: 491 HCLAL------------SSSGEVFGWGRNDSQQICPASVSSEPLLRTPILVSLPTFPASG 538
Query: 304 VACGHSLTVALTTSGH---------VYTMGSPVY 328
+AC + ++ T S H V +G P +
Sbjct: 539 IACTSAQSLVWTQSSHQGVPRRAPFVVDLGEPTF 572
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTM 323
GK++ G+G GRLG G +P + L + +VA G +ALT G V++
Sbjct: 2693 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSW 2752
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G GRL
Sbjct: 2753 GEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRL 2812
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHGD + P LV AL ++V +ACG+ + L
Sbjct: 2813 GHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 2849
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CGHSLTVALTTSGHVYTM 323
GKL+TW RL + E P + + F +A C +A+ ++ + Y+
Sbjct: 245 GKLYTW------RLAKPEAE----PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSW 294
Query: 324 GSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G+ +LG+ + +P ++ L + V+ + CG + A +T + TWG+G R
Sbjct: 295 GTGEDHRLGHGDTHARAVPTKI-AALEQHCVQSVYCGCSYSAAITCGGNLLTWGRGTYAR 353
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
LGHG++DDR+ P+LV AL D V +A G+ ++ L
Sbjct: 354 LGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 391
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 174 bits (440), Expect = 2e-40, Method: Composition-based stats.
Identities = 121/393 (30%), Positives = 184/393 (46%), Gaps = 48/393 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG T G LG GL S P +ES + ++ GG H +++
Sbjct: 1213 GELFTWGNNT-SGQLGHGL-------AAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVID 1264
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ ++SWG G+LGHGV + PK I+ + I +A G +HT + GDL+ +
Sbjct: 1265 RSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAF 1324
Query: 153 GDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGIH-------VSSISCGPWHTAVVTSAGQ 203
G + G LG N++ H +P RVN IH V+ I CG H+ + TS G
Sbjct: 1325 GSNEH--GQLGL-NDLKHHLPIPTRVN--TADIHHAGQPTRVTGIFCGHSHSVLRTSHGD 1379
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+++FG G LGHG +S P+ ++ LKG R CG +HT ++
Sbjct: 1380 VYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDL---------- 1429
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-------T 316
++ WG G+ LG G + +LVP V V RV CG T LT T
Sbjct: 1430 --DSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNT 1487
Query: 317 SGHVYTMGSPVYGQLG------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
G+VY GS +G+LG +P D P + ++ + V ++A G+ A++TS
Sbjct: 1488 GGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIP-SINSANVVDLASGAEFNALITSNG 1546
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
+Y WG G +G++G+G D P+ V +K
Sbjct: 1547 ALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEK 1579
Score = 172 bits (436), Expect = 5e-40, Method: Composition-based stats.
Identities = 121/382 (31%), Positives = 182/382 (47%), Gaps = 42/382 (10%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACG 136
++++CG HAA++ GE+F+WG + G+LGHG+ + P +++L I +++ G
Sbjct: 1197 KSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLG 1256
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT + S +Y+WG+G Y G LGHG H +PKR+ G +SSI+ G WHT
Sbjct: 1257 GEHTVVIDRSFHIYSWGNGKY--GQLGHGVSTPHNLPKRIE-EFAGQKISSIATGYWHTL 1313
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESL------KGLRTVRAACGVWHTAA 249
V+ S G LF FG G LG D K + IP V + + R CG H+ +
Sbjct: 1314 VLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCG--HSHS 1371
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
V+ S G ++++G KG+LGHG E+ P + L N R+ CG
Sbjct: 1372 VLRT----------SHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPY 1421
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLT- 367
TV T VY G + LG +L P VE ++K VE + CG YH A LT
Sbjct: 1422 HTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKR-VERVVCGLYHTATLTQ 1480
Query: 368 ------SKTEVYTWGKGANGRLGHGD-----TDDRNSPSLVEALKDKQVKSIACGTNFTA 416
+ VY G +G+LG G + D+ P+++ ++ V +A G F A
Sbjct: 1481 PMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNA 1540
Query: 417 AI----CLHKWVSGVDQSMCSG 434
I L+ W +G + +G
Sbjct: 1541 LITSNGALYMWGAGTHGQIGNG 1562
Score = 151 bits (382), Expect = 1e-33, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 26/313 (8%)
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS--HWVP 173
++HP + + + V+CG H +T+ G+L+TWG+ T G LGHG P
Sbjct: 1182 LVHPMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTS--GQLGHGLAAGKHQSTP 1239
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK 233
RV L+ + +S G HT V+ + ++++G+G +G LGHG ++P+ +E
Sbjct: 1240 MRVES-LKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFA 1298
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTC 292
G + A G WHT + S G LF +G + G+LG D + L +PT
Sbjct: 1299 GQKISSIATGYWHTLVLR------------SGGDLFAFGSNEHGQLGLNDLKHHLPIPTR 1346
Query: 293 VA------ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVE 345
V A + CGHS +V T+ G VY+ G+ GQLG+ + + P ++
Sbjct: 1347 VNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQ 1406
Query: 346 GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQV 405
G K+ ++ I CG YH V T VY WG+G + LG G + P LVE +K+V
Sbjct: 1407 GLKGKN-IKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRV 1465
Query: 406 KSIACGTNFTAAI 418
+ + CG TA +
Sbjct: 1466 ERVVCGLYHTATL 1478
Score = 111 bits (278), Expect = 1e-21, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 118/267 (44%), Gaps = 27/267 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V I CG H+ L G+V+S+G + G+LGHG +PKLI L NI+ + CG
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YHT T +Y WG G + LG G+ + VPK V V + CG +HTA
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHM--CLGTGSNKNELVPKLVE-LFVNKRVERVVCGLYHTAT 1477
Query: 198 VT-------SAGQLFTFGDGTFGVLG-HGDRKSVSI----PREVESLKGLRTVRAACGVW 245
+T + G ++ G G LG GD +S S+ P + S+ V A G
Sbjct: 1478 LTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAE 1537
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
A + S+G L+ WG G G++G+G + +PT V+ E N +
Sbjct: 1538 FNALIT------------SNGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKNQNQFI 1585
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLG 332
S + +S + T + Y Q G
Sbjct: 1586 VDESGSTITLSSSMLLTEKNNRYTQEG 1612
Score = 42.0 bits (97), Expect = 1.1, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 28 DGDALGDVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
D + G+V+I G + G LG GG R S +D + P + S +V ++A G
Sbjct: 1484 DSNTGGNVYICGS-SEHGKLGIGGDPRSPS-----LDKAYPAIIPSINSANVVDLASGAE 1537
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN 129
AL+ G ++ WG + G++G+G + D P + S N
Sbjct: 1538 FNALITSNGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKN 1580
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 185/389 (47%), Gaps = 33/389 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
D ++WG G + G S+ L ++ Q I CG ++
Sbjct: 992 DAYLWGGGRHGQLCEAG-------------RSVLTPLHTSSFSSAQQIICGQNCTFVIQA 1038
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELVAC--GEYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ ++ AL + +LV + H+ A+T SG+++
Sbjct: 1039 NGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVF 1098
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN P+++ L+G V I+CG H+AVVT G+L TFG+G
Sbjct: 1099 SWGDGDY--GKLGHGNSDRQRRPRQIEA-LQGEEVIQIACGFKHSAVVTVDGKLLTFGNG 1155
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG G + P V++L+ ACG+ HT V + +
Sbjct: 1156 DYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCV-----------SADGSTTWA 1204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP-VYG 329
+GDGD G+LG G+ AK P + AL +VACG +VALT G V T G + G
Sbjct: 1205 FGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIG 1264
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
Q P +V L+ F+EE+ GS H LTS V+ WG A+G+LG G T
Sbjct: 1265 QTEAQMRGHCTPQKVT-TLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTG 1323
Query: 390 DRNSPSLVEALKDKQ-VKSIACGTNFTAA 417
P L+ L + +K I+ G +AA
Sbjct: 1324 TVREPQLLGGLGSSEPIKQISAGRTHSAA 1352
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS------CGPWHTAVVT 199
S D Y WG G + L G V L +H SS S CG T V+
Sbjct: 990 SCDAYLWGGGRHG-QLCEAGRSV-----------LTPLHTSSFSSAQQIICGQNCTFVIQ 1037
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G + G+G++G LG G+ + L L V A G T V V S
Sbjct: 1038 ANGTVLACGEGSYGRLGQGNS---------DDLHSLTIVSALQGFVVTQLVTSVGSDGHS 1088
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+ SG++F+WGDGD G+LGHG+ + + P + AL ++ACG + +T G
Sbjct: 1089 LALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGK 1148
Query: 320 VYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGK 377
+ T G+ YG+LG + K P RV+ L + +ACG H V V + + +G
Sbjct: 1149 LLTFGNGDYGRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTWAFGD 1207
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G+T +++P +EAL +VK +ACGT F+ A+
Sbjct: 1208 GDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVAL 1248
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 208/419 (49%), Gaps = 38/419 (9%)
Query: 45 GVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLD-VQNIACGGRHAALVNKQGEVFSWGE 102
GV+ G + G + +S++ PK +ES + ++ + CGG H+A++ GE+ WG
Sbjct: 9 GVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGY 68
Query: 103 ESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG---DGTYNF 159
G+LG G D++ P+++ ++ N+ V+C + H+ A+ G LYTWG G
Sbjct: 69 GGCGQLGLGDLKDIVIPRVMTSIK--NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGI 126
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G L + ++ L V +SCG +HTA +T + +T+G G G LGHGD
Sbjct: 127 GSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGD 186
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
V P+ +ESL GL CG HTA ++ ++GK++ G G G+L
Sbjct: 187 TNDVYTPKLIESLAGLSVKNIVCGGHHTAILL------------NNGKVYFCGGGAFGKL 234
Query: 280 GHGDKEAKLVPTCV-AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----P 334
G G KE +P + +L + V+ G+ + +TT G VYT G G+LG+ P
Sbjct: 235 GFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGP 292
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR-NS 393
+ D P VE KL+ I+CG H V+++ +VY WG N LGHG D + N
Sbjct: 293 EPDILSPKLVE-KLNSIIAVNISCGHSHTVVISNIGDVYAWGVTRN--LGHGVIDSKPND 349
Query: 394 PSLVEALKDKQVKSIACGTNFTAAIC-LHKWVSGVDQSMCSGCRLPFNNFKRKRHNCYN 451
P+L L++K + ++CG T A+ + + V+ S+ S N+ K+++ N
Sbjct: 350 PTLHPILQNKNIVQVSCGKTHTIALSDIELLIDKVNSSLTS-------NYNEKKNSNLN 401
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 203/406 (50%), Gaps = 70/406 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE-----SAVVLDVQNIACGGRH 87
G+++ WG G LG GL V SLPK ++ S + + + CGG H
Sbjct: 1141 GELYTWGSNQS-GQLGHGLE-------VNKTLSLPKRVDFFRGKSPIFM----VECGGEH 1188
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
V+ V+SWG + G+LGHG + + PK+I+ L+ I+ +A G H + S
Sbjct: 1189 TIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKS 1248
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRV--NGPLEGIH------VSSISCGPWHTAVV 198
G+L+++G G +FG LG G+ S +P R+ N + G+ ++ I+CG H+ +
Sbjct: 1249 GELFSFGYG--DFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVIC 1306
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
+ G+++++G G G LGH +++S PR +E+L+G+ + +CG +HT A ++
Sbjct: 1307 SENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGV--TKISCGHFHTVATTDL----- 1359
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT--- 315
+++WG G+ +LGH + + VP V ++ N +V CG + T+ +T
Sbjct: 1360 -------KNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPD 1412
Query: 316 ------------------TSGHVYTMGSPVYGQLG------NPQADGKLPNRVEGKLSKS 351
+S +Y GS +G+LG +P D +P ++G S +
Sbjct: 1413 DLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLN 1472
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
++ I+CGS A++TS +Y WG G G++G+G DD P+ +
Sbjct: 1473 LID-ISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 182/378 (48%), Gaps = 56/378 (14%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMN-IELVACGE 137
++CG H A++ GE+++WG G+LGHG V+ + PK +D + I +V CG
Sbjct: 1127 VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGG 1186
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT AV + +Y+WG FG LGHG + + +V L G + +I+ G H V
Sbjct: 1187 EHTIAVDSNYFVYSWGSD--KFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIV 1244
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE---SLKGL------RTVRAACGVWHTA 248
+ +G+LF+FG G FG LG G S +IP +E + GL + + ACG H+
Sbjct: 1245 LKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSV 1304
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
E +G++++WG G +G+LGH E P + L +++CGH
Sbjct: 1305 ICSE------------NGEVYSWGLGKQGQLGHKVFENISKPRLIETL--RGVTKISCGH 1350
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
TVA T +VY+ GS + +LG+ D +P V+ + K+ V ++ CG H +T
Sbjct: 1351 FHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKN-VSKVVCGQNHTMTIT 1409
Query: 368 ---------------------SKTEVYTWGKGANGRLGH-GDTD----DRNSPSLVEALK 401
S + +Y WG +G+LG GD D+ P+ ++ +
Sbjct: 1410 FPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVN 1469
Query: 402 DKQVKSIACGTNFTAAIC 419
+ I+CG++F+A I
Sbjct: 1470 SLNLIDISCGSDFSAMIT 1487
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 45/252 (17%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ IACG H+ + ++ GEV+SWG G+LGH V ++ P+LI+ L + ++CG
Sbjct: 1293 ITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLR--GVTKISCGH 1350
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+HT A T ++Y+WG G + LGH ++ VPK V+ ++ +VS + CG HT
Sbjct: 1351 FHTVATTDLKNVYSWGSGEH--MKLGHSSDKDESVPKVVDFFIQK-NVSKVVCGQNHTMT 1407
Query: 198 VT---------------------SAGQLFTFGDGTFGVLGH-GDRKS----VSIPREVES 231
+T S+ ++ +G G LG GD KS IP ++
Sbjct: 1408 ITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKG 1467
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ L + +CG +A + S+ ++ WG G G++G+G + VPT
Sbjct: 1468 VNSLNLIDISCGSDFSAMI------------TSNNAIYVWGCGRFGQIGNGKNDDVWVPT 1515
Query: 292 CVAA--LVEPNF 301
++ +PNF
Sbjct: 1516 RISLNDSTKPNF 1527
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 275 DKGRLGHG---DKEAKLVPTCVAALV-EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
D+ ++ H D E K P +A L E +V+CG +T G +YT GS GQ
Sbjct: 1096 DETKINHKIRIDPELKRFP--MAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQ 1153
Query: 331 LGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
LG+ K LP RV+ KS + + CG H + S VY+WG G+LGHG
Sbjct: 1154 LGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGT 1213
Query: 388 TD-DRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
+++ P ++E L +++++IA G F I L K
Sbjct: 1214 KAVNQSRPKVIEELTGQKIQAIAAG--FAHNIVLKK 1247
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/398 (31%), Positives = 195/398 (48%), Gaps = 29/398 (7%)
Query: 24 SGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC 83
+G D D V +WG + + GGL G K+ +P ++ L +IA
Sbjct: 1823 AGALDQDLPCTVMVWGLNDKEQL--GGLK------GSKV--KVPTFSQTISRLRPIHIAG 1872
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTC 141
G + +V + G+V++ GE + GRLG GV +V P + L ++ VA G H
Sbjct: 1873 GSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHAL 1932
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+TL G +++WG+G G LGHGN + P+ V L + ++CG H+A ++S
Sbjct: 1933 ALTLDGKVFSWGEG--EDGKLGHGNRTTLDKPRLVET-LRSKKIRDVACGSSHSAAISSQ 1989
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSS 259
G+L+T+G G +G LGHGD + P+ V +L G R ++ ACG T A+ E
Sbjct: 1990 GELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTE------- 2042
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G +F+WGDGD G+LG G E P + L ++ CG ++ALT +G
Sbjct: 2043 -----DGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGE 2097
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
V+T G Y +LG+ + G L V +A G+ H +T +VY WG
Sbjct: 2098 VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDND 2157
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+G+ G G+T P+LV L V +ACG++ + A
Sbjct: 2158 HGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 192/384 (50%), Gaps = 22/384 (5%)
Query: 41 GTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
G + G G N G G++ P E+ +L +A G + V G++F+
Sbjct: 2974 GGASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFA 3033
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTY 157
G SGGRLG G P L+ +L ++ ++ VA G H A+T G++Y WG+G
Sbjct: 3034 TGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEG-- 3091
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LGHGN +S+ PK V L G++V+ I+CG H+A +T++G + T+G G +G LGH
Sbjct: 3092 EDGKLGHGNRMSYDRPKLVEH-LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGH 3150
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG--KLFTWGDGD 275
GD + P+ VE+L G R + ACG + + C + +++WGDGD
Sbjct: 3151 GDSEDQLRPQLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGD 3198
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG G + +P + +L +V CG +VALT SG VYT + +LG+
Sbjct: 3199 YGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGS 3258
Query: 336 ADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
D + P +V K + IA GS H + EVYTWG G+LG G P
Sbjct: 3259 VDHVRRPKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRP 3317
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LV AL+ K + + CG+ T A+
Sbjct: 3318 RLVAALQGKHIVKVTCGSAHTLAL 3341
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 153/308 (49%), Gaps = 19/308 (6%)
Query: 65 SLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
++P L S + V+ +A GG+H + +GEV++WGE G+LGHG PKL+
Sbjct: 3051 AIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLV 3110
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+ L+ MN+ +ACG H+ A+T SG + TWG G Y G LGHG+ P+ V L G
Sbjct: 3111 EHLNGMNVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPQLVEA-LLG 3167
Query: 183 IHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
I+CG T +T ++++GDG +G LG G +P ++ESL GL ++
Sbjct: 3168 YRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKV 3227
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG + A+ + SG ++TW GD RLGHG + P VAAL
Sbjct: 3228 ECGSQFSVALTK------------SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKK 3275
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+A G VA + SG VYT G GQLG+ R+ L + ++ CGS
Sbjct: 3276 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGS 3335
Query: 361 YHVAVLTS 368
H L++
Sbjct: 3336 AHTLALST 3343
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 152/288 (52%), Gaps = 29/288 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGEG DG LG G NR M PK +E ++V +IACG H+A +
Sbjct: 3083 GEVYAWGEGE-DGKLGHG-NR--------MSYDRPKLVEHLNGMNVADIACGSAHSAAIT 3132
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G V +WG+ GRLGHG D L P+L++AL +ACG + T +T +++
Sbjct: 3133 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 3192
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LG G +P ++ L G+ V + CG + +T +G ++T+ G
Sbjct: 3193 SWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWSKG 3249
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLF 269
F LGHG V P++V +L+G + + A G H A CS SG+++
Sbjct: 3250 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA-------------CSDSGEVY 3296
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
TWGD D+G+LG G A P VAAL + +V CG + T+AL+TS
Sbjct: 3297 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 3344
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 165/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V WG +LG S V P +S + +A G V +G +Y G+GT
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIAGGSKSLFIVGQNGKVYACGEGT 1893
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G V+H VP P+ +V ++ G H +T G++F++G+G G
Sbjct: 1894 N--GRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+R ++ PR VE+L+ + ACG H+AA+ S G+L+TWG
Sbjct: 1950 KLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAI------------SSQGELYTWGL 1997
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQL 331
G+ GRLGHGD +L P VAAL +VACG + T+ALT G V++ G +G+L
Sbjct: 1998 GEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKL 2057
Query: 332 GNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G ++G P+ +E +LS V +I CG+ LT EV+TWGKG RLGHG
Sbjct: 2058 GRGGSEGSDTPHEIE-RLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQH 2116
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L+ ++V +A G A+
Sbjct: 2117 VRKPQPIGGLRGRRVIHVAVGALHCLAV 2144
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
A ++ +G G LG + + P E+L LR V+ A G AV
Sbjct: 2976 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 3026
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSG 318
GKLF G G GRLG G ++ +PT + +L +VA G +ALTT G
Sbjct: 3027 ---PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 3083
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G G+LG+ + P VE L+ V +IACGS H A +T+ V TWGK
Sbjct: 3084 EVYAWGEGEDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITASGHVLTWGK 3142
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL----HKWVSG------V 427
G GRLGHGD++D+ P LVEAL + IACG+ +C+ + W G +
Sbjct: 3143 GRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 3202
Query: 428 DQSMCSGCRLPFN 440
+ GC+LP+
Sbjct: 3203 GRGGSDGCKLPYK 3215
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVY 321
+GK++ G+G GRLG G +P + L + +VA G +ALT G V+
Sbjct: 1882 QNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVF 1941
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
+ G G+LG+ R+ L + ++ACGS H A ++S+ E+YTWG G G
Sbjct: 1942 SWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYG 2001
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
RLGHGD + P LV AL ++V +ACG+ + L
Sbjct: 2002 RLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLAL 2040
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 190/379 (50%), Gaps = 47/379 (12%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDA 124
P+ +E ++ + + +++ G+V++WG+ GG LGH +++ P+L++
Sbjct: 67 PQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKGGILGHYDITSFNMIQPELVEK 126
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH-------------GNEVSHW 171
L N+ I+ ++CG +H A++ G+LYTWG+ + G LGH GN+ +
Sbjct: 127 LENIQIKQISCGPFHMAAISQDGELYTWGNKDH--GKLGHEIQQKSNKVEIKRGNQNYDY 184
Query: 172 -----VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI- 225
+P +V L GI +SCG T V+T G++++FG+ G LG+ ++ +
Sbjct: 185 AEGSMLPTKVQ-SLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQ 243
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P+++ L+ + + CG +AAV SSGK++TWG+ D G+LG+
Sbjct: 244 PKKIPDLQNI--INIDCGQQFSAAV------------SSSGKVYTWGNNDHGQLGNNQSI 289
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNRV 344
+ P V ++CG + AL+ G ++T G GQLG+ + D P ++
Sbjct: 290 YQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQI 349
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD-----RNSPSLVEA 399
E K + ++ CG H A LT ++Y +G+G G+LG G+ + R +P +VE
Sbjct: 350 E---FKEKIIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEF 406
Query: 400 LKDKQVKSIACGTNFTAAI 418
K +V + CG +T AI
Sbjct: 407 FKKMKVVDVTCGGEYTLAI 425
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 184/346 (53%), Gaps = 40/346 (11%)
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
Q V++WG + G+LG +++ P+ ++ LS+ NI V + + A++ G +YTWG
Sbjct: 42 QKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG 101
Query: 154 DGTYNFGLLGHGNEVS-HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+LGH + S + + + LE I + ISCGP+H A ++ G+L+T+G+
Sbjct: 102 KNK--GGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDH 159
Query: 213 GVLGHGDRKSVS------------------IPREVESLKGLRTVRAACGVWHTAAVVEVM 254
G LGH ++ + +P +V+SL G++ + +CG T + E
Sbjct: 160 GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTE-- 217
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRVACGHSLTVA 313
+G+++++G+ KG+LG+ +E P + L N + CG + A
Sbjct: 218 ----------NGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL--QNIINIDCGQQFSAA 265
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
+++SG VYT G+ +GQLGN Q+ + PN+V G + + I+CG +A L+++ ++
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTG-FGGNKIINISCGDNFIAALSNEGKL 324
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+TWG G +G+LGH + +D +P +E K+K +K + CG TA +
Sbjct: 325 FTWGYGNDGQLGHSNRNDLYAPKQIE-FKEKIIK-VDCGGTHTAFL 368
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 27/259 (10%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLI 122
S LP ++S + + ++CGG+ ++ + GEV+S+G G+LG+ ++ PK I
Sbjct: 188 SMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKI 247
Query: 123 DALSN-MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
L N +NI+ CG+ + AV+ SG +YTWG+ + G LG+ + P +V G
Sbjct: 248 PDLQNIINID---CGQQFSAAVSSSGKVYTWGNNDH--GQLGNNQSIYQARPNQVTG-FG 301
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + +ISCG A +++ G+LFT+G G G LGH +R + P+++E + + ++
Sbjct: 302 GNKIINISCGDNFIAALSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE--KIIKVD 359
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKL--VPTCVAAL 296
CG HTA + + + +L+ +G G++G+LG G+ EA + P V
Sbjct: 360 CGGTHTAFLTQ------------NNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFF 407
Query: 297 VEPNFCRVACGHSLTVALT 315
+ V CG T+A+T
Sbjct: 408 KKMKVVDVTCGGEYTLAIT 426
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 10/181 (5%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ NI CG + +A V+ G+V++WG G+LG+ P + I ++CG
Sbjct: 252 NIINIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCG 311
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ A++ G L+TWG G N G LGH N + PK++ + I V CG HTA
Sbjct: 312 DNFIAALSNEGKLFTWGYG--NDGQLGHSNRNDLYAPKQIEFKEKIIKV---DCGGTHTA 366
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSV-----SIPREVESLKGLRTVRAACGVWHTAAVV 251
+T QL+ FG G G LG G+ + P+ VE K ++ V CG +T A+
Sbjct: 367 FLTQNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426
Query: 252 E 252
E
Sbjct: 427 E 427
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++ WG G+ G+LG ++ + P V L + N +V S+++AL+ G VYT G
Sbjct: 45 VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNK 104
Query: 328 YGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G LG+ + P VE KL +++I+CG +H+A ++ E+YTWG +G+LG
Sbjct: 105 GGILGHYDITSFNMIQPELVE-KLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKLG 163
Query: 385 HGDTDDRNS------------------PSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
H N P+ V++L + K ++CG FT + + V
Sbjct: 164 HEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYS 223
Query: 427 VDQSM 431
SM
Sbjct: 224 FGNSM 228
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 171/321 (53%), Gaps = 24/321 (7%)
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF---GLLGHG 165
GHG D L PK ++AL+ + V+ G YH+ T G L ++G G+ N G LGHG
Sbjct: 90 GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHG 149
Query: 166 NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
++ + +P+ V L G+ + ++ G H+ V++ G +F+FG G G LGHGD+ +
Sbjct: 150 DQRTQMIPRPVL-SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV 208
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P+ + SL+ + V A G H+ V E SG ++++G G +G LGHGD +
Sbjct: 209 PKLISSLQREKVVDIAAGSAHSLVVAE------------SGDVYSFGLGSEGALGHGDTD 256
Query: 286 AKLVPTCVAALVEPNFCRVACG--HSLTVA----LTTSGHVYTMGSPVYGQLGNPQADGK 339
LVP + V+ +VA G HSL ++ L G V + G YGQLG
Sbjct: 257 MSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRM 316
Query: 340 LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSPSLVE 398
+ + + ++ + V EI G++H VLT+ VY++G +G+LGHG D D P+L++
Sbjct: 317 IASPAQVQVEAAAV-EIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQ 375
Query: 399 ALKDKQVKSIACGTNFTAAIC 419
+L+ +++ +A G NF+ +
Sbjct: 376 SLERERIVDVAAGNNFSLVLS 396
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 188/371 (50%), Gaps = 19/371 (5%)
Query: 56 SCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG-----GRLGH 110
S G +D PK +E+ V++++ G H+ + K G + S+G S GRLGH
Sbjct: 89 SGHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGH 148
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G + P+ + +LS + I VA G +H+ ++ G+++++G G G LGHG++
Sbjct: 149 GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGID--GSLGHGDQARQ 206
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
VPK ++ L+ V I+ G H+ VV +G +++FG G+ G LGHGD +P+++E
Sbjct: 207 LVPKLIS-SLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIE 265
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
V+ A G H+ + ++ V G++ ++G G+LG G ++++
Sbjct: 266 HFVQRPAVKVAAGGSHSLVLSKLYVLEQE------GRVLSFGQNSYGQLGLG-HFSRMIA 318
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG--NPQADGKLPNRVEGKL 348
+ VE + G ++ LT G VY+ G +GQLG N D P ++ L
Sbjct: 319 SPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQ-SL 377
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+ + ++A G+ VL+++ V+++G G NGRLG GD + P++V A V +I
Sbjct: 378 ERERIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFA-AGHTVSAI 436
Query: 409 ACGTNFTAAIC 419
+ G + + +
Sbjct: 437 SAGYSHSLVVV 447
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 149/308 (48%), Gaps = 30/308 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G + +G G+ + V+ G L G + +P+ + S + + +A G H+ +++
Sbjct: 128 GGLLSFGYGSANVVVDGRLGH-----GDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLS 182
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
QG VFS+G G LGHG + L PKLI +L + +A G H+ V SGD+Y++
Sbjct: 183 DQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSF 242
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT------SAGQLFT 206
G G+ G LGHG+ VPK++ ++ V ++ G H+ V++ G++ +
Sbjct: 243 GLGSE--GALGHGDTDMSLVPKKIEHFVQRPAV-KVAAGGSHSLVLSKLYVLEQEGRVLS 299
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS- 265
FG ++G LG G R + + V AA VE+ G S ++
Sbjct: 300 FGQNSYGQLGLGHFS--------------RMIASPAQVQVEAAAVEIEAGAHHSLVLTND 345
Query: 266 GKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G+++++G G+LGHG D PT + +L VA G++ ++ L+ G V++ G
Sbjct: 346 GRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFG 405
Query: 325 SPVYGQLG 332
G+LG
Sbjct: 406 CGKNGRLG 413
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+G + ++G D GHGD KL P CV AL V+ G ++ T G + + G
Sbjct: 77 AGNVVSFGLADPS--GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFG 134
Query: 325 S-----PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
V G+LG+ ++ R LS + ++A G++H VL+ + V+++G G
Sbjct: 135 YGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGI 194
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+G LGHGD + P L+ +L+ ++V IA G+ + +
Sbjct: 195 DGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVA 234
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 165/344 (47%), Gaps = 19/344 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-- 135
V+ I CG L+ G VF+ GE + GRLG G D I L I +A
Sbjct: 321 VREIVCGQNCTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSL 380
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ HT AV SG++++WGDG Y G LGHGN PK++ L+ HV SCG H
Sbjct: 381 GGDGHTLAVADSGEVFSWGDGDY--GKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKH 437
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+AV+T G++FTFG G +G+LG G P+ + SLK + ACG HT A+
Sbjct: 438 SAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALAN-- 495
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ KL+ WGDG+ G+LG G + +P V + ++ACG ++ L
Sbjct: 496 ---------NGKKLYAWGDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVL 546
Query: 315 TTSGHVYTMGSPVY-GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T+G++YT G + G D +P V + ++ IA G ++ L + ++
Sbjct: 547 ATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIID-IAVGCNYILALDNSGNIW 605
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
WG G+LG G T+ P LV + ++ GT AA
Sbjct: 606 GWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAA 649
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+ WG G L L P L+ + + CG+ T + +G ++ G+GT
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTFKQ--VREIVCGQNCTFLLQTNGSVFACGEGT 347
Query: 157 YNFGLLGHG--NEVSHWVPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
Y G LG G ++ VP L+G I +++ G HT V +G++F++GDG
Sbjct: 348 Y--GRLGQGTSDDEHSLVPIT---ELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGD 402
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGHG+ + P+++ +L+ V+A+CG H+A + + GK+FT+
Sbjct: 403 YGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTK------------DGKVFTF 450
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQ 330
G G G LG G + P + +L + ++ACG T+AL +G +Y G +G+
Sbjct: 451 GQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGK 510
Query: 331 LGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + +PN V+ + +++IACGS VL + +YT+G + D
Sbjct: 511 LGLGSTSVRSIPNLVDSYRNVC-LKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLL 569
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
D P +V +L + IA G N+ A+
Sbjct: 570 DNTIPQIVSSLMPHPIIDIAVGCNYILAL 598
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 155/334 (46%), Gaps = 25/334 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP-KALESAVVLDVQNIACGGRHAALV 91
G VF GEGT G LG G + S +P L+ ++ + G H V
Sbjct: 338 GSVFACGEGTY-GRLGQGTSD-------DEHSLVPITELQGYCIIQLATSLGGDGHTLAV 389
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEVFSWG+ G+LGHG PK I AL ++ +CG H+ +T G ++T
Sbjct: 390 ADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFT 449
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG-QLFTFGDG 210
+G G Y G+LG G P+ + L+ H+S I+CG HT + + G +L+ +GDG
Sbjct: 450 FGQGQY--GILGDGGNSPQKTPQLILS-LKNEHISQIACGKDHTLALANNGKKLYAWGDG 506
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G SIP V+S + + + ACG + + ++G L+T
Sbjct: 507 EFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLA------------TNGYLYT 554
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G D + D +P V++L+ +A G + +AL SG+++ G+ GQ
Sbjct: 555 FGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQ 614
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
LG + ++ S + + ++ G+ H A
Sbjct: 615 LGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCA 648
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 151/322 (46%), Gaps = 30/322 (9%)
Query: 17 VSSSSQGSGHDDGDA-LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
+++S G GH A G+VF WG+G G LG G + PK + +
Sbjct: 376 LATSLGGDGHTLAVADSGEVFSWGDGDY-GKLGHGNSE---------RQRKPKQIIALQA 425
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
V +CG +H+A++ K G+VF++G+ G LG G +S P+LI +L N +I +AC
Sbjct: 426 EHVVQASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIAC 485
Query: 136 GEYHTCAVTLSGD-LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ HT A+ +G LY WGDG FG LG G+ +P V+ + + I+CG
Sbjct: 486 GKDHTLALANNGKKLYAWGDG--EFGKLGLGSTSVRSIPNLVDS-YRNVCLKKIACGSKF 542
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ V+ + G L+TFG F + D +IP+ V SL + A G + A+
Sbjct: 543 SIVLATNGYLYTFGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALD--- 599
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+SG ++ WG ++G+LG G +P V N R++ G + A
Sbjct: 600 ---------NSGNIWGWGTNEEGQLGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAAW 650
Query: 315 TTSGHVYTMGSPVYGQLGNPQA 336
+ S + S Q+G P A
Sbjct: 651 SNSQ---SPSSNTQLQIGTPNA 669
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 113/241 (46%), Gaps = 30/241 (12%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+++ ++ +G G L K+ P V + K +R + CG N
Sbjct: 284 ISAPITVYVWGSNIHGELPGLQGKTCLQPNLVSTFKQVREI--VCG------------QN 329
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSL----- 310
+ ++G +F G+G GRLG G D E LVP + L +C + SL
Sbjct: 330 CTFLLQTNGSVFACGEGTYGRLGQGTSDDEHSLVP--ITEL--QGYCIIQLATSLGGDGH 385
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
T+A+ SG V++ G YG+LG+ ++ + + L V + +CG H AVLT
Sbjct: 386 TLAVADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDG 445
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-----LHKWVS 425
+V+T+G+G G LG G + +P L+ +LK++ + IACG + T A+ L+ W
Sbjct: 446 KVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGD 505
Query: 426 G 426
G
Sbjct: 506 G 506
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 200/409 (48%), Gaps = 23/409 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG G LGG G K+ +P S L + G + V
Sbjct: 1407 GSIFGWGHNH-RGQLGGPE-------GAKV--KIPIPCPSLAALKPIQLVGGEQTLFTVT 1456
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--CGEYHTCAVTLSGDLY 150
+G+VF+ G +GGRLG G + V P LI+++ +++I V+ G H A++ G++Y
Sbjct: 1457 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVY 1516
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G G LGHGN S P R+ L G + ++ G H+A + + G L+T+G G
Sbjct: 1517 SWGEGVD--GKLGHGNRSSLDHP-RIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1573
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGH D + P+ V +LK V ACG A + + G SS +++
Sbjct: 1574 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGN-GDAQTLCITEGTGGSS-----VVWS 1627
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + VP + L+ + VACG ++AL+ +G VYT G Y +
Sbjct: 1628 WGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1687
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + + P +E L V E++ GS H +VYTWG G++G G T
Sbjct: 1688 LGHGSDEHVRRPKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQ 1746
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLP 438
P LV AL+ + ++CG+ T A L + + +G +LP
Sbjct: 1747 ATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHKRRRTGAKLP 1795
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 194/399 (48%), Gaps = 42/399 (10%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D VF+WG D + GGL G K + P A + L V + G +
Sbjct: 427 DCAAKVFVWGLNDKDQL--GGLK------GSKHKT--PVASKDLQRLKVTQVIGGSKSLF 476
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDS-------DVLHPKLIDALSNMNIELVACGEYHTCA 142
V G+V++ GE + GRLG G + VL P+ I L+ V G H A
Sbjct: 477 AVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMA 530
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+T G +Y+WGDG G LGHG+ P+++ E + ISCG H+A + S+G
Sbjct: 531 LTYDGHVYSWGDGEE--GKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGSSG 587
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
L+T+G G +G LGHG+ ++ P+ V++L G + V+ ACG + +
Sbjct: 588 TLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACG------------SRDAQTL 635
Query: 263 C--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
C G +++WGDGD G+LG G + VP V L + ++ CG ++AL+ G V
Sbjct: 636 CLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLV 695
Query: 321 YTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+T G Y +LG+ + P VEG L + V ++A G+ H +T +V+ WG
Sbjct: 696 WTWGKGDYFRLGHGSDQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFAWGDND 754
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+ G+G T P V+ L+ ++ +ACG++ + A
Sbjct: 755 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 143/289 (49%), Gaps = 27/289 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G +G LG G + D+ P+ +E+ +++I+CG H+A +
Sbjct: 535 GHVYSWGDGE-EGKLG---------HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG 584
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG GRLGHG + +L PK + ALS + VACG + T +T G +Y
Sbjct: 585 SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY 644
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G VPK V L G V I CG + ++ G ++T+G G
Sbjct: 645 SWGDG--DFGKLGRGGSDGCCVPKPVER-LSGQDVVKIECGAQFSLALSRCGLVWTWGKG 701
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P+ VE L+ + V A G H AV E G++F
Sbjct: 702 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE------------GGQVFA 749
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
WGD D G+ G+G P V L ++ACG S ++A + H
Sbjct: 750 WGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSH 798
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 125/293 (42%), Gaps = 31/293 (10%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
IELV C + + D TY + ++ W+ KR +
Sbjct: 1352 IELVRLKIEEVCGEDEDTSMNQYEDNTYFTHQID--EQLVTWINKRPDD----------- 1398
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
W + V S G +F +G G LG + V IP SL L+ ++ G
Sbjct: 1399 ---WTLSWVGS-GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT 1454
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CG 307
V GK+F G G GRLG G E+ +PT + ++ + +V+ G
Sbjct: 1455 VT------------GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAG 1502
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+AL+ G VY+ G V G+LG+ R+ L + ++A G H A +
Sbjct: 1503 GKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAIN 1562
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ +YTWGKG GRLGH D++D+ P LV ALKD V +ACG +C+
Sbjct: 1563 ATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1615
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCRVACGHSLTVALTTSGHVYTMG 324
GK++ G+ GRLG G + +P V G +ALT GHVY+ G
Sbjct: 482 GKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWG 541
Query: 325 SPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG+ +AD P ++E + + +I+CGS H A + S +YTWG G GRL
Sbjct: 542 DGEEGKLGHGSRADALTPRKIE-TFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRL 600
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHG+ P V+AL +QV +ACG+ +CL
Sbjct: 601 GHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCL 637
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+ K+F WG DK +LG P L +V G A+T G VY G
Sbjct: 429 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 488
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG G + +R+ L ++++A G H LT VY+WG G G+
Sbjct: 489 ESTSGRLGLGPVTGSV-SRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 547
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSGV 427
LGHG D +P +E +K ++ I+CG++ +AAI L+ W G+
Sbjct: 548 LGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 596
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 200/409 (48%), Gaps = 23/409 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG G LGG G K+ +P S L + G + V
Sbjct: 1406 GSIFGWGHNH-RGQLGGPE-------GAKV--KIPIPCPSLAALKPIQLVGGEQTLFTVT 1455
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--CGEYHTCAVTLSGDLY 150
+G+VF+ G +GGRLG G + V P LI+++ +++I V+ G H A++ G++Y
Sbjct: 1456 GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVY 1515
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG+G G LGHGN S P R+ L G + ++ G H+A + + G L+T+G G
Sbjct: 1516 SWGEGVD--GKLGHGNRSSLDHP-RIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKG 1572
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGH D + P+ V +LK V ACG A + + G SS +++
Sbjct: 1573 RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGN-GDAQTLCITEGTGGSS-----VVWS 1626
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + VP + L+ + VACG ++AL+ +G VYT G Y +
Sbjct: 1627 WGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1686
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + + P +E L V E++ GS H +VYTWG G++G G T
Sbjct: 1687 LGHGSDEHVRRPKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQ 1745
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLP 438
P LV AL+ + ++CG+ T A L + + +G +LP
Sbjct: 1746 ATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHKRRRTGAKLP 1794
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 194/399 (48%), Gaps = 42/399 (10%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D VF+WG D + GGL G K + P A + L V + G +
Sbjct: 426 DCAAKVFVWGLNDKDQL--GGLK------GSKHKT--PVASKDLQRLKVTQVIGGSKSLF 475
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDS-------DVLHPKLIDALSNMNIELVACGEYHTCA 142
V G+V++ GE + GRLG G + VL P+ I L+ V G H A
Sbjct: 476 AVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLA------VHSGGRHAMA 529
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+T G +Y+WGDG G LGHG+ P+++ E + ISCG H+A + S+G
Sbjct: 530 LTYDGHVYSWGDGEE--GKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGSSG 586
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
L+T+G G +G LGHG+ ++ P+ V++L G + V+ ACG + +
Sbjct: 587 TLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACG------------SRDAQTL 634
Query: 263 C--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
C G +++WGDGD G+LG G + VP V L + ++ CG ++AL+ G V
Sbjct: 635 CLTQDGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLV 694
Query: 321 YTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+T G Y +LG+ + P VEG L + V ++A G+ H +T +V+ WG
Sbjct: 695 WTWGKGDYFRLGHGSDQHVRRPQVVEG-LREHKVVDVAVGALHCLAVTEGGQVFAWGDND 753
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+ G+G T P V+ L+ ++ +ACG++ + A
Sbjct: 754 HGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 143/289 (49%), Gaps = 27/289 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G +G LG G + D+ P+ +E+ +++I+CG H+A +
Sbjct: 534 GHVYSWGDGE-EGKLG---------HGSRADALTPRKIETFPEKCIRDISCGSSHSAAIG 583
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLY 150
G +++WG GRLGHG + +L PK + ALS + VACG + T +T G +Y
Sbjct: 584 SSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVY 643
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LG G VPK V L G V I CG + ++ G ++T+G G
Sbjct: 644 SWGDG--DFGKLGRGGSDGCCVPKPVER-LSGQDVVKIECGAQFSLALSRCGLVWTWGKG 700
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ LGHG + V P+ VE L+ + V A G H AV E G++F
Sbjct: 701 DYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE------------GGQVFA 748
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
WGD D G+ G+G P V L ++ACG S ++A + H
Sbjct: 749 WGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADTSH 797
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 125/293 (42%), Gaps = 31/293 (10%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
IELV C + + D TY + ++ W+ KR +
Sbjct: 1351 IELVRLKIEEVCGEDEDTSMNQYEDNTYFTHQID--EQLVTWINKRPDD----------- 1397
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
W + V S G +F +G G LG + V IP SL L+ ++ G
Sbjct: 1398 ---WTLSWVGS-GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFT 1453
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA--CG 307
V GK+F G G GRLG G E+ +PT + ++ + +V+ G
Sbjct: 1454 VT------------GEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAG 1501
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+AL+ G VY+ G V G+LG+ R+ L + ++A G H A +
Sbjct: 1502 GKHILALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAIN 1561
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ +YTWGKG GRLGH D++D+ P LV ALKD V +ACG +C+
Sbjct: 1562 ATGGLYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCI 1614
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 3/157 (1%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCRVACGHSLTVALTTSGHVYTMG 324
GK++ G+ GRLG G + +P V G +ALT GHVY+ G
Sbjct: 481 GKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWG 540
Query: 325 SPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG+ +AD P ++E + + +I+CGS H A + S +YTWG G GRL
Sbjct: 541 DGEEGKLGHGSRADALTPRKIE-TFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRL 599
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GHG+ P V+AL +QV +ACG+ +CL
Sbjct: 600 GHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCL 636
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 7/169 (4%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+ K+F WG DK +LG P L +V G A+T G VY G
Sbjct: 428 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACG 487
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGR 382
G+LG G + +R+ L ++++A G H LT VY+WG G G+
Sbjct: 488 ESTSGRLGLGPVTGSV-SRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWGDGEEGK 546
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSGV 427
LGHG D +P +E +K ++ I+CG++ +AAI L+ W G+
Sbjct: 547 LGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 595
>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
Length = 2239
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 188/385 (48%), Gaps = 34/385 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
++WG G G LG +N C +LP+ LE+ ++Q I G L + G
Sbjct: 1386 YVWG-GVRHGQLGLNMNVGRHC-------ALPRRLEA--FDNMQTIELGLNCTFLCSASG 1435
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLYTW 152
V S GE S GRLGHG D+ P L+ AL + ++ + HT A+T SG+L+TW
Sbjct: 1436 AVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTW 1495
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG Y G LGHGN P+ V L G V CG HTAVVT+ G L+TFG G +
Sbjct: 1496 GDGDY--GKLGHGNSERQRRPRLVET-LVGETVVDGCCGYKHTAVVTATGYLYTFGYGDY 1552
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ S P V + + +V +CG+ HT A+ ++ +G
Sbjct: 1553 GRLGHGNTTSKKTPTLVHDCQNIASV--SCGLNHTLALSR-----------DGMTVWAFG 1599
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G+ A P +AAL V CGH +V L +G VY G + +G
Sbjct: 1600 DGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFNGIG 1659
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
P +P ++E + F +I+CG+ + L V++WG ++G++G G + +
Sbjct: 1660 GP-GQTVIPTKLETINKRVF--QISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVH 1716
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P L L ++K + G + A
Sbjct: 1717 EPLL--TLTGHRIKQVRAGKTHSIA 1739
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 140/280 (50%), Gaps = 29/280 (10%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLFT 206
Y WG + G LG V +P+R LE ++ +I G T + +++G + +
Sbjct: 1386 YVWGGVRH--GQLGLNMNVGRHCALPRR----LEAFDNMQTIELGLNCTFLCSASGAVTS 1439
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW---HTAAVVEVMVGNSSSSNC 263
G+G++G LGHG+ +S+P V +L+G + V HT A+ E
Sbjct: 1440 TGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE----------- 1488
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
SG+LFTWGDGD G+LGHG+ E + P V LV CG+ T +T +G++YT
Sbjct: 1489 -SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTF 1547
Query: 324 GSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWGKGANG 381
G YG+LG+ K P V + + ++CG H L+ V+ +G G G
Sbjct: 1548 GYGDYGRLGHGNTTSKKTPTLVHDCQN---IASVSCGLNHTLALSRDGMTVWAFGDGDFG 1604
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
+LG G+T SP+ + AL++ +KS+ CG ++ + ++
Sbjct: 1605 KLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAIN 1644
>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
Length = 1586
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 187/385 (48%), Gaps = 34/385 (8%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
++WG G G LG +N C +LP+ LE+ ++Q I G L + G
Sbjct: 733 YVWG-GVRHGQLGLNMNVGRHC-------ALPRRLEA--FDNMQTIELGLNCTFLCSASG 782
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLYTW 152
V S GE S GRLGHG D+ P L+ AL + ++ + HT A+T SG+L+TW
Sbjct: 783 AVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTW 842
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG Y G LGHGN P+ V L G V CG HTAVVT+ G L+TFG G +
Sbjct: 843 GDGDY--GKLGHGNSERQRRPRLVET-LVGETVVDGCCGYKHTAVVTATGYLYTFGYGDY 899
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG+ S P V + + V +CG+ HT A+ ++ +G
Sbjct: 900 GRLGHGNTTSKKTPTLVHDCQNI--VSVSCGLNHTLALSR-----------DGMTVWAFG 946
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DGD G+LG G+ A P +AAL V CGH +V L +G VY G + +G
Sbjct: 947 DGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFNGIG 1006
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
P +P ++E + F +I+CG+ + L V++WG ++G++G G + +
Sbjct: 1007 GP-GQTVIPTKLETIKKRVF--QISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVH 1063
Query: 393 SPSLVEALKDKQVKSIACGTNFTAA 417
P L L ++K + G + A
Sbjct: 1064 EPLL--TLTGHRIKQVRAGKTHSIA 1086
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 145/289 (50%), Gaps = 31/289 (10%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLFT 206
Y WG + G LG V +P+R LE ++ +I G T + +++G + +
Sbjct: 733 YVWGGVRH--GQLGLNMNVGRHCALPRR----LEAFDNMQTIELGLNCTFLCSASGAVTS 786
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW---HTAAVVEVMVGNSSSSNC 263
G+G++G LGHG+ +S+P V +L+G + V HT A+ E
Sbjct: 787 TGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE----------- 835
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
SG+LFTWGDGD G+LGHG+ E + P V LV CG+ T +T +G++YT
Sbjct: 836 -SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTF 894
Query: 324 GSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWGKGANG 381
G YG+LG+ K P V + + ++CG H L+ V+ +G G G
Sbjct: 895 GYGDYGRLGHGNTTSKKTPTLVHDCQN---IVSVSCGLNHTLALSRDGMTVWAFGDGDFG 951
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH--KWVSGVD 428
+LG G+T SP+ + AL++ +KS+ CG ++ + ++ +VSG D
Sbjct: 952 KLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQD 1000
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G + VP+ + L I + I+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIK--VPRNIKS-LTDIQIVQIACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G G LG G + KS S P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + +N C+ K SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGKCSSNSNDEEYFCVKKIFSGGDQSF 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 168/328 (51%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G T G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + +++ P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG ++ G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+++ I +ACG YH+ A++ ++++WG + G LG G E+ ++ L GI
Sbjct: 133 SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH--GQLGLGFELKSQSAPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG G + +P+ ++S + + IACG H+ ++
Sbjct: 103 GQVYAWGLDT-DGQLGLP--------GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRFVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G + VP+ + L I + I+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIK--VPRNIKS-LTDIQIVQIACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G G LG G + KS S P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + +N C+ K SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGKCSSNSNDEEYFCVKKIFSGGDQSF 375
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 168/328 (51%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G T G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + +++ P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 147/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG ++ G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+++ I +ACG YH+ A++ ++++WG + G LG G E+ ++ L GI
Sbjct: 133 SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH--GQLGLGFELKSQSAPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG G + +P+ ++S + + IACG H+ ++
Sbjct: 103 GQVYAWGLDT-DGQLGLP--------GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRFVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 192/392 (48%), Gaps = 36/392 (9%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
L +VF+WG + + G + +P+ + S + DVQ + G ++
Sbjct: 341 LSEVFMWGSNSSNQHAEGATEV----------TDIPRLVRS--LSDVQQVEAGQYCTFII 388
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGD 148
+ +G V + G+ S GRLG G S+ PK I+ N I+ V+ + H+ A++ +G+
Sbjct: 389 DTKGCVSACGKNSYGRLGLGNSSNQPVPKRINI--NCKIKQVSSSKGCDGHSLALSDTGE 446
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+Y+WGDG Y G LGHG+ +H PK + GP G + +S G H+A VTS GQL+T+G
Sbjct: 447 VYSWGDGDY--GKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWG 504
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS--G 266
+G G LGHGD IP V+SL + ACG HT A CS
Sbjct: 505 EGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLA-------------CSRDGN 551
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++++G GD G+LGHG+ P + L +VA G +VALT +G V+T G
Sbjct: 552 TVWSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQG 611
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
G+ + P VE L + + +I+ G H LT VY WG G+ G G
Sbjct: 612 SNLGCGSSEITLFSPAVVED-LMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQG 670
Query: 387 -DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
T + PS V L+ KQ+ I+ GT+ + A
Sbjct: 671 HSTSPVSRPSKVINLEGKQINQISAGTSHSVA 702
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 180/387 (46%), Gaps = 28/387 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
D ++WG G +G LG VG C + P +++ + Q I CG ++
Sbjct: 3393 DAYLWGNGR-NGQLGD--TAVGQCINIWS----PIKIQNFKI--AQRIVCGQNCTFVLTS 3443
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
QG V S GE + GRLGHG + + +I AL I V+ + H+ A+T +G+++
Sbjct: 3444 QGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVF 3503
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG +FG LGHGN PK + L + V ++CG H+AV++ G+++ FG
Sbjct: 3504 SWGDG--DFGKLGHGNNERQRKPKLIES-LYDVVVIQVACGHKHSAVLSQDGEVYVFGSA 3560
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG G + P ++ L ACG HT + E +V +
Sbjct: 3561 EHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGENVV-------------WA 3607
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G+G+ G+LG G K+ VP + L N + CG+ T+ L+ G +Y+ GS
Sbjct: 3608 FGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNLQD 3667
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
+ KL + V ++A G HV VLT++ V+ WG G LG G
Sbjct: 3668 ATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLP 3727
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
P +++ L DK +K IA AA
Sbjct: 3728 VQKPMIIQILSDKNIKQIATSRTHCAA 3754
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 20/307 (6%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
++ AL+ V+ V H+ + + GEVFSWG+ G+LGHG + PKLI++
Sbjct: 3470 TMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIES 3529
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV--NGPLEG 182
L ++ + VACG H+ ++ G++Y +G + G LG G ++ P ++ G L
Sbjct: 3530 LYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEH--GKLGLGGHINKKRPTKIVHKGFL-- 3585
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
++ I+CG HT + ++ FG+G G LG G +K + +P+E+ +L G +A C
Sbjct: 3586 -NIKYIACGQNHT-ICIGENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYC 3643
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G T + E G+L++ G + KL+P +
Sbjct: 3644 GNGFTMFLSE------------DGELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVT 3691
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
VA G + LT GHV+ G+ G LG + LS +++IA H
Sbjct: 3692 DVATGPDHVLVLTARGHVWAWGNNCEGILGFGHDLPVQKPMIIQILSDKNIKQIATSRTH 3751
Query: 363 VAVLTSK 369
A T++
Sbjct: 3752 CAAWTAE 3758
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 142/278 (51%), Gaps = 28/278 (10%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+++ WG + N G EV+ +P+ V + V + G + T ++ + G +
Sbjct: 343 EVFMWGSNSSNQHAEG-ATEVTD-IPRLVRSLSD---VQQVEAGQYCTFIIDTKGCVSAC 397
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV-WHTAAVVEVMVGNSSSSNCSSG 266
G ++G LG G+ + +P+ + ++ V ++ G H+ A+ + +G
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSD------------TG 445
Query: 267 KLFTWGDGDKGRLGHGD----KEAKLVP-TCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
++++WGDGD G+LGHGD KE KL+ + ++E V+ G+ + A+T+ G +Y
Sbjct: 446 EVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIE----LVSAGYRHSAAVTSDGQLY 501
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGAN 380
T G +G+LG+ + + + LS V +ACGS H +A V+++G G N
Sbjct: 502 TWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGDN 561
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LGHG+T P +E L+ ++K +A G +F+ A+
Sbjct: 562 GKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVAL 599
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 128/302 (42%), Gaps = 27/302 (8%)
Query: 15 SAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
+ VS+S GH G+VF WG+G G LG G N PK +ES
Sbjct: 3481 TQVSTSIGSDGHSLALTETGEVFSWGDGDF-GKLGHGNNE---------RQRKPKLIESL 3530
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
+ V +ACG +H+A++++ GEV+ +G G+LG G + P I +NI+ +
Sbjct: 3531 YDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLGGHINKKRPTKIVHKGFLNIKYI 3590
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
ACG+ HT + G+ W G G LG G++ +VP+ + L G ++ CG
Sbjct: 3591 ACGQNHTICI---GENVVWAFGEGEGGKLGIGSKKDIYVPQEI-ITLNGKNIKKAYCGNG 3646
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
T ++ G+L++ G IP ++ +G A G H +
Sbjct: 3647 FTMFLSEDGELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLT-- 3704
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+ G ++ WG+ +G LG G P + L + N ++A + A
Sbjct: 3705 ----------ARGHVWAWGNNCEGILGFGHDLPVQKPMIIQILSDKNIKQIATSRTHCAA 3754
Query: 314 LT 315
T
Sbjct: 3755 WT 3756
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 63/284 (22%)
Query: 190 CGPWHTA--VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
C P+ V+ + TF G+ + R + + ++V L ++ T
Sbjct: 269 CLPFEKLYRVLEEMSSILTFAFGSEEFENYKSRNRIPL-QDV----ALLLMKKLVSFGET 323
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL----------- 296
+ V + NS+ ++F WG + G E +P V +L
Sbjct: 324 SVVRTPLNQNSAELPQPLSEVFMWGSNSSNQHAEGATEVTDIPRLVRSLSDVQQVEAGQY 383
Query: 297 ----VEPNFCRVAC--------------------------------------GHSLTVAL 314
++ C AC GHSL AL
Sbjct: 384 CTFIIDTKGCVSACGKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSL--AL 441
Query: 315 TTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+ +G VY+ G YG+LG+ A K P ++G +E ++ G H A +TS ++Y
Sbjct: 442 SDTGEVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLY 501
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
TWG+G +GRLGHGD + R P+LV++L D V +ACG+ T A
Sbjct: 502 TWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLA 545
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 205 FTFGDGTFGVLGH---GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
+ +G+G G LG G ++ P ++++ K + R CG N +
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIKIQNFKIAQ--RIVCG------------QNCTFV 3440
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC-----GHSLTVALTT 316
S G + + G+G+ GRLGHG ++ T ++AL +V+ GHSL ALT
Sbjct: 3441 LTSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSL--ALTE 3498
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
+G V++ G +G+LG+ + + ++ L V ++ACG H AVL+ EVY +G
Sbjct: 3499 TGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFG 3558
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+LG G ++ P+ + +K IACG N T I
Sbjct: 3559 SAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICI 3600
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA----LKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
+G G NG+LG G T +R SP V+ +++ I F C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDSEEYF----CVKRIFSGGDQS 374
Query: 431 M 431
Sbjct: 375 F 375
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 168/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 26/303 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLG 332
QLG
Sbjct: 326 QLG 328
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA----LKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
+G G NG+LG G T +R SP V+ +++ I F C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDSEEYF----CVKRIFSGGDQS 374
Query: 431 M 431
Sbjct: 375 F 375
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 168/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 26/303 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLG 332
QLG
Sbjct: 326 QLG 328
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA----LKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
+G G NG+LG G T +R SP V+ +++ I F C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQRLPDIDSEEYF----CVKRIFSGGDQS 374
Query: 431 M 431
Sbjct: 375 F 375
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 168/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 139/270 (51%), Gaps = 19/270 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG +S G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+LS++ I VACG YH+ A++ + +++ WG Y G LG G + ++ L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLG 332
+ACG T A +SG +Y+ G GQLG
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLG 328
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 184/389 (47%), Gaps = 65/389 (16%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV--LHPKLIDALSNMNIELVA 134
V N++CG H A + + G V++WG G LGHG S V LHPK + + ++ V
Sbjct: 876 QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVV 935
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
CG HT A T SG +Y WG+G G LG G+ HW+P + L +HV+ ++ G H
Sbjct: 936 CGGEHTLARTESGSVYGWGNG--RIGQLGLGDRTLHWLPVPIK-TLRKMHVTQLAAGYAH 992
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
T VV +G++ FG G G LG G RK + +P +++++ + V+AACG HTA + E
Sbjct: 993 TIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSI--VQAACGYCHTALLTE-- 1048
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTCVAALVEPNFCRVACGHSLTV 312
+G+++T G G+LGH D + +L P V L +ACG T+
Sbjct: 1049 ----------AGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTI 1098
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKL-------------PNRVEGKLSKSFVEEIACG 359
A+T +VYT +G + +DG + P+ V+G + K + ++CG
Sbjct: 1099 AITDLDNVYT-----WGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR-ISLVSCG 1152
Query: 360 SYHVAVLTSKTEVYTWG-----------KGANGRLGHGDTDDRNSPSLVEALKDKQ---- 404
H T EVY W +G+ G T+ +P LV A+ D Q
Sbjct: 1153 HAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTE---APLLVSAIPDGQDAKS 1209
Query: 405 ---VKSIACGTNFTAAI----CLHKWVSG 426
VK A G FT + L+ W SG
Sbjct: 1210 KPVVKHAAAGEEFTLVVTENGLLYSWGSG 1238
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 136/269 (50%), Gaps = 30/269 (11%)
Query: 175 RVNGPLEGI----HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI--PRE 228
++N P G+ V ++SCG H A +T G ++T+G G LGHGD+ V P++
Sbjct: 863 KLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQ 922
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
V K CG HT A E SG ++ WG+G G+LG GD+
Sbjct: 923 VIFFKSKCVKEVVCGGEHTLARTE------------SGSVYGWGNGRIGQLGLGDRTLHW 970
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGK 347
+P + L + + ++A G++ T+ + SG V G GQLG + D +P +++
Sbjct: 971 LPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAM 1030
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT--DDRNSPSLVEALKDKQV 405
S + + ACG H A+LT EVYT G +G+LGH D +DR +P +VE L K++
Sbjct: 1031 PS---IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRI 1087
Query: 406 KSIACGTNFTAAIC----LHKW--VSGVD 428
+ IACG+ T AI ++ W V G D
Sbjct: 1088 RFIACGSFHTIAITDLDNVYTWGGVQGTD 1116
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 33/267 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V ++G GG + ++G+ G++ D +P L++ + + ACG H AL+
Sbjct: 1000 GEVMVFG--------GGEVGQLGT--GMRKDLLVPTKLQA--MPSIVQAACGYCHTALLT 1047
Query: 93 KQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ GEV++ G G+LGH + +D L PK+++ L+ I +ACG +HT A+T ++Y
Sbjct: 1048 EAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVY 1107
Query: 151 TWG--DGTYNFGLLGHGNE---VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
TWG GT + G + + + P V G L G +S +SCG H+ T G+++
Sbjct: 1108 TWGGVQGTDSDGAMRQERKAAILKRVTPSIVKG-LMGKRISLVSCGHAHSVATTMDGEVY 1166
Query: 206 TF---GDGTFGVLGHGDRKSVS-----IPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G +L G S + P V ++ + ++ V H AA E +
Sbjct: 1167 VWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVV 1226
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDK 284
+ +G L++WG G G+LG GD+
Sbjct: 1227 T-----ENGLLYSWGSGAFGQLGLGDQ 1248
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD--DRNSPS 395
GKL G +S V ++CG H A LT VYTWG+ +G LGHGD + P
Sbjct: 862 GKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPK 921
Query: 396 LVEALKDKQVKSIACGTNFTAA 417
V K K VK + CG T A
Sbjct: 922 QVIFFKSKCVKEVVCGGEHTLA 943
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 182/386 (47%), Gaps = 50/386 (12%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-------------- 112
PK + A + +ACGG H + G+V+S+G+ ++
Sbjct: 468 PKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNEST 527
Query: 113 ----DSDVLHPKLID------ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 162
S L P L++ AL I +VACG H+ A+T +G+LYTWG G G L
Sbjct: 528 RVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSG--EDGRL 585
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
GHG+ VP++V L V S SCG HTAV+T+ G +FTFG G G LG GD K
Sbjct: 586 GHGDMRDRAVPRKVMSLLRE-SVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKW 644
Query: 223 VSIPREVESL-KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR--L 279
P + +G CG W+ A ++ G +FTWG +G+ L
Sbjct: 645 RDTPHPIVGFPQGTSISLVVCG-WNFTAALD-----------RQGSVFTWGKTGEGQCGL 692
Query: 280 GHGDKEAKLVPTCVAALVE---PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
G+ D++ ++VP CV L + + VACG++ TV LT SG +Y+ G YGQLG
Sbjct: 693 GYVDRD-QVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDV 751
Query: 337 DGKLPNRVE----GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
LP RV+ + + + CG++H T + ++ WG + G G G T +++
Sbjct: 752 YQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKD 811
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
P ++ + +ACG +T A+
Sbjct: 812 KPERIDCFSSQTELVVACGHKYTIAL 837
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 176/384 (45%), Gaps = 46/384 (11%)
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD-----------GTYNFGLLGH 164
VL PK + + I VACG H +T +GD+Y++GD T+ L +
Sbjct: 465 VLRPKHVSLANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDN 524
Query: 165 GNE---------VSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ H V + + L ++ ++CG H+ +T AG+L+T+G G G
Sbjct: 525 ESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGR 584
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LGHGD + ++PR+V SL V A+CG HTA + + G +FT+G G
Sbjct: 585 LGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLT------------AKGSVFTFGRG 632
Query: 275 DKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ--L 331
GRLG GD + + P + + + V CG + T AL G V+T G GQ L
Sbjct: 633 RNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGL 692
Query: 332 GNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
G D +P V+ ++ S V ++ACG H VLT+ E+Y+WG G G+LG GD
Sbjct: 693 GYVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDV- 751
Query: 390 DRNSPSLVEALKD-----KQVKSIACGTNFTAAICLHK--WVSGVDQSMCSGCRLPFNNF 442
+ P+ V+ D Q+ + CG + A + + G++ G N
Sbjct: 752 YQPLPARVQLPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKD 811
Query: 443 KRKRHNCYNCGLVFCHSCSSKKSL 466
K +R +C++ +C K ++
Sbjct: 812 KPERIDCFSSQTELVVACGHKYTI 835
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 153/321 (47%), Gaps = 31/321 (9%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
+L KAL + +ACG +H+ + GE+++WG GRLGHG D P+ + +
Sbjct: 545 ALEKALHRTTI---AMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMS 601
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L ++ +CG HT +T G ++T+G G G LG G+ P + G +G
Sbjct: 602 LLRESVVSASCGGAHTAVLTAKGSVFTFGRG--RNGRLGLGDNKWRDTPHPIVGFPQGTS 659
Query: 185 VSSISCGPWHTAVVTSAGQLFTF---GDGTFGVLGHGDRKSVSIPREVESLK---GLRTV 238
+S + CG TA + G +FT+ G+G G LG+ DR V +PR V+ L+ G V
Sbjct: 660 ISLVVCGWNFTAALDRQGSVFTWGKTGEGQCG-LGYVDRDQV-VPRCVDKLRDVAGSSVV 717
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL---VPTCVAA 295
ACG HT + +SG+L++WG G+ G+LG GD L V A
Sbjct: 718 DVACGYTHTVVLT------------ASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADA 765
Query: 296 LVEPN-FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFV 353
L P+ RV CG ++A T ++ G YG G A+ P R++ S++ +
Sbjct: 766 LCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTEL 825
Query: 354 EEIACGSYHVAVLTSKTEVYT 374
+ACG + L +YT
Sbjct: 826 -VVACGHKYTIALEVNASLYT 845
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 137/300 (45%), Gaps = 36/300 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG G DG LG G R D ++P+ + S + V + +CGG H A++
Sbjct: 572 GELYTWGSGE-DGRLGHGDMR---------DRAVPRKVMSLLRESVVSASCGGAHTAVLT 621
Query: 93 KQGEVFSWGEESGGRLGHGVDS--DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+G VF++G GRLG G + D HP ++ +I LV CG T A+ G ++
Sbjct: 622 AKGSVFTFGRGRNGRLGLGDNKWRDTPHP-IVGFPQGTSISLVVCGWNFTAALDRQGSVF 680
Query: 151 TW---GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
TW G+G G + V V K + + G V ++CG HT V+T++G+L+++
Sbjct: 681 TWGKTGEGQCGLGYVDRDQVVPRCVDKLRD--VAGSSVVDVACGYTHTVVLTASGELYSW 738
Query: 208 GDGTFGVLGHGDRKS-----VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
G G +G LG GD V +P + + R CG +H+ A E V
Sbjct: 739 GLGEYGQLGTGDVYQPLPARVQLPADALCAPD-QLARVYCGAFHSIATTEQRV------- 790
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+F WG G G G K P + VACGH T+AL + +YT
Sbjct: 791 -----MFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEVNASLYT 845
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/358 (32%), Positives = 180/358 (50%), Gaps = 31/358 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG-----GRLGHGVDSDVLHPKL 121
P+ L + + D+ +I+CG ++A + + G+V+ WG S LG+G D L P+
Sbjct: 568 PERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQK 627
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L I +++ G YH+ AV +G+L TWG G G LGHG+ + +PK V +
Sbjct: 628 VESLQE--IVVISIGFYHSAAVKSNGELLTWGCG--EDGQLGHGDVFNQPIPKVVQS-IT 682
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V+ + CG HT +T G++FT+G +G LG GD + P V SL ++ A
Sbjct: 683 SHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIA 742
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG H A V+ N ++ +G+G G +P V +L N
Sbjct: 743 CGATHNA----VLTNNR--------EVLVFGNGA----AMGSANIISIPIMVPSLKIMNI 786
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQ-LGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
R++CGH T ALT G VYT GS GQ LG+ + ++ L + +I+CG
Sbjct: 787 ERLSCGHYSTAALTECGDVYTWGS---GQELGHGHGTSEAHPKLVETLRNQSIRQISCGG 843
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H+A LT ++YT GK G+LGH D+N P +++L SI+CG N AA+
Sbjct: 844 RHMAFLTDSGKIYTSGKDPFGQLGHA-AGDQNRPKKIDSLLKTTFMSISCGENHNAAL 900
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/341 (33%), Positives = 174/341 (51%), Gaps = 29/341 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDV++WG G+ V + +G+ G D LP+ +ES + ++ I+ G H+A V
Sbjct: 596 GDVYMWGRGS---VKNPPIATLGN--GTFDDQLLPQKVES--LQEIVVISIGFYHSAAVK 648
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
GE+ +WG G+LGHG + PK++ ++++ + V CGE HT +T +G ++TW
Sbjct: 649 SNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTW 708
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GT +G LG G+ + P V L+ H+ I+CG H AV+T+ ++ FG+G
Sbjct: 709 --GTSEYGQLGLGDTQKNCTPMLVTS-LDKYHIIQIACGATHNAVLTNNREVLVFGNGA- 764
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G +SIP V SLK + R +CG + TAA+ E C G ++TWG
Sbjct: 765 ---AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTE----------C--GDVYTWG 809
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G + GHG EA P V L + +++CG LT SG +YT G +GQLG
Sbjct: 810 SGQELGHGHGTSEAH--PKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLG 867
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+ D P +++ L +F+ I+CG H A L T +
Sbjct: 868 HAAGDQNRPKKIDSLLKTTFM-SISCGENHNAALFDTTRSF 907
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 146/290 (50%), Gaps = 34/290 (11%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLF 205
L TWG G+Y + S P+R L ++S SISCG +++A +T G ++
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPER----LPNFNISDICSISCGSYYSAALTENGDVY 599
Query: 206 TFGDGT-----FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G G+ LG+G +P++VESL+ + V + G +H+AAV
Sbjct: 600 MWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEI--VVISIGFYHSAAV---------- 647
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
S+G+L TWG G+ G+LGHGD + +P V ++ +V CG T+ LT +G V
Sbjct: 648 --KSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKV 705
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+T G+ YGQLG + L K + +IACG+ H AVLT+ EV +G GA
Sbjct: 706 FTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGA- 764
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
G + + P +V +LK ++ ++CG TAA+ ++ W SG
Sbjct: 765 ---AMGSANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSG 811
>gi|225434018|ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254306 [Vitis vinifera]
Length = 647
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/114 (68%), Positives = 92/114 (80%)
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ LRT +ACGVWHT AVV +MVGN SSSNCSSGK FTWGD DKGR GHGDKEAKLVPT
Sbjct: 19 ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPT 78
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE 345
CVAA ++PNFCR+ACGHSLTVALTTSG+VYT+G P++ + + +PN +E
Sbjct: 79 CVAAPIDPNFCRIACGHSLTVALTTSGYVYTIGRPMHHKGESSNTVQPIPNTIE 132
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 357 ACGSYH-VAVL-----------TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
ACG +H VAV+ S + +TWG GR GHGD + + P+ V A D
Sbjct: 28 ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 87
Query: 405 VKSIACGTNFTAAICLHKWVSGVDQSM-----CSGCRLPFNN----FKRKRHNCYNCGLV 455
IACG + T A+ +V + + M S P N F+ H+ + GL
Sbjct: 88 FCRIACGHSLTVALTTSGYVYTIGRPMHHKGESSNTVQPIPNTIEQFEEALHHLLSSGL- 146
Query: 456 FCHSCSSKKSLKASMAPNPNKPYRVCDNC--------FNKLRKTFDTDGSSHSS 501
S ++ L+ N ++P R D+ FNK R +D + S
Sbjct: 147 -----SGRQLLQTE---NVSEPIRHSDDTVRVDPLDHFNKYRGGYDITNKHYWS 192
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 125 LSNMNIELVACGEYHTCAVT------------LSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
+SN+ + ACG +HT AV SG +TWGD + G GHG++ + V
Sbjct: 19 ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDS--DKGRFGHGDKEAKLV 76
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
P V P++ + I+CG T +T++G ++T G
Sbjct: 77 PTCVAAPIDP-NFCRIACGHSLTVALTTSGYVYTIG 111
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+ F+WG+ GR GHG L P + A + N +ACG T A+T SG +YT G
Sbjct: 53 GKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPNFCRIACGHSLTVALTTSGYVYTIGR 112
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
++ G + +P + E +H
Sbjct: 113 PMHH---KGESSNTVQPIPNTIEQFEEALH 139
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 189 SCGPWHTAVVT------------SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
+CG WHT V S+G+ FT+GD G GHGD+++ +P V +
Sbjct: 28 ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 87
Query: 237 TVRAACG 243
R ACG
Sbjct: 88 FCRIACG 94
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + +SCG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVSCGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F++G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPPDIDSQEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 168/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ +CG +H+ A+ + ++F+W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVSCGYYHSLAL------------SKASEVFSW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 160/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I V+CG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 SWGQNKY--GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + ++CG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 388
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 201/401 (50%), Gaps = 48/401 (11%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT +G LG + D P+ L + + ++ACGG H +
Sbjct: 20 VWSWGAGT-EGQLG---------TKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSA 69
Query: 95 GEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V SWG + G+LGHG V S+ L+PK + +L I V+ G H+ V+ +G ++T G
Sbjct: 70 GKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCG 129
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
DG+ FG LGHG+ SH P +V+ ++ HV ++CG H+ V+ Q++ FG G G
Sbjct: 130 DGS--FGQLGHGDHASHCSPVKVSCFVD-QHVEQVACGMRHSLVLLKGNQVYGFGSGKRG 186
Query: 214 VLG-HGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG DR KSV++P+ V +G+ A H+AAV G ++TW
Sbjct: 187 QLGVSNDRVKSVNVPKVVSGFEGVEIAGIAANGDHSAAV------------SVDGHVYTW 234
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G KG E VP C+ + + NF +VA G + +A++ G V +G G L
Sbjct: 235 GRGFKGF------EDARVPQCLNSSL--NFTKVALGWNHALAMSGEGEVCMLGGNHLGVL 286
Query: 332 GNPQ---ADGKLPNRVEGKLSK------SFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+ Q LP+ E L K + + +IA G+ H ++T E+ TWG G +G+
Sbjct: 287 SDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQ 346
Query: 383 LGHGDTDDRNSP---SLVEALKDKQVKSIACGTNFTAAICL 420
LG GDT DR SP SL L + + CG+ FT A+ +
Sbjct: 347 LGLGDTRDRISPVTVSLGYDLNEAASVIVFCGSGFTFAVTM 387
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 140/329 (42%), Gaps = 58/329 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V WG G G LG GL V +S PKA+ S + +++ G H+ V+
Sbjct: 70 GKVLSWGRGN-SGQLGHGL--------VVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVS 120
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF+ G+ S G+LGHG + P + + ++E VACG H+ + +Y +
Sbjct: 121 DNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGF 180
Query: 153 GDGTYNFGLLGHGNE--VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G G G LG N+ S VPK V+G EG+ ++ I+ H+A V+ G ++T+G G
Sbjct: 181 GSGKR--GQLGVSNDRVKSVNVPKVVSG-FEGVEIAGIAANGDHSAAVSVDGHVYTWGRG 237
Query: 211 TFG-------------------VLGHGDRKSVSIPREVESLKG--------LRTVRAACG 243
G LG ++S EV L G L+ + A
Sbjct: 238 FKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKH 297
Query: 244 VWHT-------------AAVVEVMVGNSSSSNCSS-GKLFTWGDGDKGRLGHGDKEAKLV 289
+ H + ++ G S + G++ TWG G+ G+LG GD ++
Sbjct: 298 LPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRIS 357
Query: 290 PTCVAA---LVEPNFCRVACGHSLTVALT 315
P V+ L E V CG T A+T
Sbjct: 358 PVTVSLGYDLNEAASVIVFCGSGFTFAVT 386
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
N + S ++++WG G +G+LG + + P + + +ACG + +ALT+
Sbjct: 9 NEDDKDESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTS 68
Query: 317 SGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
+G V + G GQLG+ L + L F+ ++ G H ++ V+T
Sbjct: 69 AGKVLSWGRGNSGQLGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTC 128
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+ G+LGHGD SP V D+ V+ +ACG + +
Sbjct: 129 GDGSFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVL 171
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 178/368 (48%), Gaps = 20/368 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GLLG +E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
A + S +Y++G G NG+LG G T +R SP V+ + C+ +
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDIDSEEYFCVKRI 367
Query: 424 VSGVDQSM 431
SG DQS
Sbjct: 368 FSGGDQSF 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 168/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ ++ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ ++ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ ++ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ ++ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LADIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ ++ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQCPPDIDYEDYFCVKRIFSGGDQSF 375
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLADIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +L+++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D PKL+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 191/397 (48%), Gaps = 39/397 (9%)
Query: 35 VFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
VF WG GT G LG G + G + P+ LE+ ++ + G H+A ++K
Sbjct: 7 VFTWGTGT-QGQLGHGSFEKTG--IRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDK 63
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+G++++WG +LGHG + + P+++DAL + I ++CGEYHT AV G L+T
Sbjct: 64 EGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFT 123
Query: 152 WGDGTYNF---GLLGHGNEVSHWVPKRVNGPL-EGIHVSSISCGPWHTAVVTSAGQLFTF 207
WG G G LGH +P+ V + +G+ V S+ CG HT +T G+++ +
Sbjct: 124 WGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAW 183
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+G +G LG+G + +P VE + G T A+ E G+
Sbjct: 184 GNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITE------------HGE 231
Query: 268 LFTWGDGDKGRLGHGD------KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+++WG +LG G + +P V AL N +V+ G+ A+T G ++
Sbjct: 232 VYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMF 291
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G+ ++ + P+ + L + + CG Y+ A L++ ++T+GKG +
Sbjct: 292 MWGAKLWLE----------PHEMT-ILKDETIISVQCGRYYTAALSASGNLFTFGKGHSN 340
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LGHG+ + P LVE+L V S+ CG + A+
Sbjct: 341 CLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGAL 377
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 35/292 (11%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV--LDVQNIACGGRH 87
D G +F WG G G L G D S+P+ + + V + V+++ CG H
Sbjct: 116 DEEGKLFTWGWGGSTMKGSGALGHAGG-----EDESIPRLVRTLVDQGVPVKSVECGELH 170
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+ K GE+++WG GRLG+G + P+ ++ ++ NI ++ G T A+T G
Sbjct: 171 TVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHG 230
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHW----VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
++Y+WG +++ LG G V ++ +P V L ++V+ +S G H A VT+ G+
Sbjct: 231 EVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVE-ALSNVNVAQVSAGYDHAAAVTNDGK 289
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+F +G K P E+ LK + CG ++TAA+
Sbjct: 290 MFMWG-----------AKLWLEPHEMTILKDETIISVQCGRYYTAAL------------S 326
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+SG LFT+G G LGHG+++ +L P V +L N + CG+S ALT
Sbjct: 327 ASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALT 378
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSI--------PREVESLKGLRTVRAACGVWHTAA 249
+++ +FT+G GT G LGHG + I PR +E+ +G + G H+AA
Sbjct: 1 MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACG 307
+ + GKL+TWG + +LGHG +++ + +P V AL ++CG
Sbjct: 61 IDK------------EGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCG 108
Query: 308 HSLTVALTTSGHVYTMG--------SPVYGQLGNPQADGKLPNRVEGKLSKSF-VEEIAC 358
T A+ G ++T G S G G D +P V + + V+ + C
Sbjct: 109 EYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGE--DESIPRLVRTLVDQGVPVKSVEC 166
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G H LT E++ WG G GRLG+G +D+ P VE D+ + SI+ G +FT AI
Sbjct: 167 GELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAI 226
Query: 419 CLH 421
H
Sbjct: 227 TEH 229
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG G R+G+ G + +P+ +E ++ +I+ G +
Sbjct: 178 GEIWAWGNGE--------YGRLGN--GASDNFEVPEPVEYFADENIASISAGRDFTFAIT 227
Query: 93 KQGEVFSWGEESGGRLGHG----VDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLS 146
+ GEV+SWG S +LG G VD + P +++ALSN+N+ V+ G H AVT
Sbjct: 228 EHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTND 287
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G ++ WG W+ L+ + S+ CG ++TA ++++G LFT
Sbjct: 288 GKMFMWG--------------AKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFT 333
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
FG G LGHG+RK+ P VESL V CG H A+ +
Sbjct: 334 FGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALTK 379
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ ++ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIIQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDTDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ ++ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 175/361 (48%), Gaps = 20/361 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG 434
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHY 378
Query: 435 C 435
C
Sbjct: 379 C 379
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LADIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ ++ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQCPPDIDYEDYFCVKRIFSGGDQSF 375
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLADIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +L+++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D PKL+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 170/334 (50%), Gaps = 32/334 (9%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHP----KLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
V+SWG+ G+LG G ++V P L D L+ N+ + G+ H+ + GD+YTW
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 153 GDGTYNFGLLGHG--NEVS---HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
G G G LGH E+ H VPK +E S+++CG HT VVT G ++T+
Sbjct: 61 GRGWE--GQLGHDVVTEIELEPHIVPK-----MENRGSSAVACGRNHTVVVTDNGLIYTW 113
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSG 266
G+ G LG GD KS + P ++S L +V + ACG +HT A+ C G
Sbjct: 114 GENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAI------------CIEG 161
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+++WG G+LGHG+ + PT V + + R ACG T+ LT + +Y GS
Sbjct: 162 TIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSN 221
Query: 327 VYGQLGNPQADGKL--PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YGQLG ++D + P+ V+ L +S + CG H L ++YTWG+ G+LG
Sbjct: 222 AYGQLGLNRSDKAVLQPDIVD-HLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLG 280
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G P LV AL+ +V+ IACG + A
Sbjct: 281 LGHYTHSPVPELVTALRSVRVQQIACGYDHCVAF 314
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 168/333 (50%), Gaps = 25/333 (7%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDALSNMNIELVAC 135
+V++I G H+A++ + G+V++WG G+LGH V +++ L P ++ + N VAC
Sbjct: 37 NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVAC 96
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G HT VT +G +YTWG+ G LG G+ S P ++ L V SI+CG +HT
Sbjct: 97 GRNHTVVVTDNGLIYTWGEN--KAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHT 154
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ G ++++G G LGHG+ K+ P +V + +RAACG HT + +
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD--- 211
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ K++ WG G+LG + +A L P V L C V CG+S ++AL
Sbjct: 212 ---------ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMAL 262
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTE-- 371
+ +YT G GQLG + L V++IACG H VA + + E
Sbjct: 263 MKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG 322
Query: 372 ------VYTWGKGANGRLGHGDTDDRNSPSLVE 398
VY+WG+G G+LGH + R +P +VE
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 45/328 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQN-----IACGGRH 87
GDV+ WG G +G LG D LE +V ++N +ACG H
Sbjct: 55 GDVYTWGRGW-EGQLG-------------HDVVTEIELEPHIVPKMENRGSSAVACGRNH 100
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM-NIELVACGEYHTCAVTLS 146
+V G +++WGE G+LG G P LID+ N+ ++ +ACGE+HT A+ +
Sbjct: 101 TVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIE 160
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G +++WG G LGHGN + + P +V G + I + + +CG HT V+T A +++
Sbjct: 161 GTIWSWGRN--QCGQLGHGNTKTCYFPTQVVGMAKKICIRA-ACGGQHTLVLTDANKIYA 217
Query: 207 FGDGTFGVLG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+G +G LG + K+V P V+ L+ CG H+ A+++ +
Sbjct: 218 WGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMK------------N 265
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS-------- 317
+++TWG D G+LG G VP V AL ++ACG+ VA
Sbjct: 266 EQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPP 325
Query: 318 -GHVYTMGSPVYGQLGNPQADGKLPNRV 344
HVY+ G GQLG+ + + R+
Sbjct: 326 LEHVYSWGRGEEGQLGHNELLSRCTPRI 353
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 20/264 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL-DVQNIACGGRHAALV 91
G ++ WGE G LG G + S+ P ++SA+ L V +IACG H +
Sbjct: 108 GLIYTWGENKA-GQLGTGDLK---------SSNSPVLIDSALNLPSVLSIACGEFHTVAI 157
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+G ++SWG G+LGHG P + ++ ACG HT +T + +Y
Sbjct: 158 CIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYA 217
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y G LG + + L + CG H+ + Q++T+G
Sbjct: 218 WGSNAY--GQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRND 275
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV--EVMVGNSSSSNCSSGKLF 269
G LG G +P V +L+ +R + ACG H A V EV G + ++
Sbjct: 276 CGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEH-----VY 330
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCV 293
+WG G++G+LGH + ++ P V
Sbjct: 331 SWGRGEEGQLGHNELLSRCTPRIV 354
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP----NFCRVACGHSLTVALTTSGHVYTM 323
+++WG G+LG G +PT + +L +P N + G S + + G VYT
Sbjct: 1 VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60
Query: 324 GSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G GQLG+ + +L + K+ +ACG H V+T +YTWG+ G+
Sbjct: 61 GRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQ 120
Query: 383 LGHGDTDDRNSPSLVE-ALKDKQVKSIACGTNFTAAICL 420
LG GD NSP L++ AL V SIACG T AIC+
Sbjct: 121 LGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICI 159
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 175/361 (48%), Gaps = 20/361 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG 434
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQCPPDIDSEEYFCVKRIFSGGDQSFSHY 378
Query: 435 C 435
C
Sbjct: 379 C 379
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y+WG D GLLG + VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIDSEDCFCVKRIFSGGDQSF 375
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 170/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D +N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++++G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + + ++F W
Sbjct: 116 LGLLG--SEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V+SWG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYSWGLDS-DGQLG--------LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 196/382 (51%), Gaps = 33/382 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES-AVVLDVQNIACGGRHAALVNK 93
+F WG+ + +G LG G + S P+ LE+ +V+ ++CG H A + K
Sbjct: 1 MFCWGKCS-EGQLGVGETE-------QEFISTPRLLENLEFSSNVREVSCGWNHTAFLCK 52
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G V++ G G+LG + +P+ + A+ I V CG+ HT AV+ G ++ WG
Sbjct: 53 DGTVYTCGSNEFGQLGQ--EKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWG 110
Query: 154 DGTYNFGLLGHGNEVS---HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
D +Y G +G G++V +PK + G L + V I+CG H+ +T +G LF +GD
Sbjct: 111 DNSY--GQIGLGSKVKEKVQTIPKMLKG-LAKMSVVQIACGCNHSMALTISGHLFCWGDN 167
Query: 211 TFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+ G LG G S+S P V SL G+ + + G H+ A+ SSG LF
Sbjct: 168 SSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFAL------------SSSGALF 215
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D + +PT + +L C V+CG T LT+ G V+T G G
Sbjct: 216 GWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSG 275
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + R +L S V +IACG H +A++ S VYT+G+G +G+LG G T
Sbjct: 276 QLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVT 335
Query: 389 DDRNSPSLVEA--LKDKQVKSI 408
++ NSP + L+ +KS+
Sbjct: 336 NNCNSPMTAKGPWLRSNNIKSM 357
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 168/330 (50%), Gaps = 26/330 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALS-NMNIELVACGEYHTCAVTLSGDLYTWG 153
+F WG+ S G+LG G + P+L++ L + N+ V+CG HT + G +YT G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
FG LG E SH P+ V+ +E ++ ++CG HT V+ G +F +GD ++G
Sbjct: 61 SN--EFGQLGQ--EKSHTNPESVHA-IETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYG 115
Query: 214 VLGHGDR---KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G G + K +IP+ ++ L + V+ ACG H+ A+ SG LF
Sbjct: 116 QIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALT------------ISGHLFC 163
Query: 271 WGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WGD G+LG G + + P V +L F ++ G + + AL++SG ++ G YG
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223
Query: 330 QLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG + D LP ++ S+ V ++CG H AVLTS V+T+G G +G+LGH
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQG-VCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSN 282
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T A+
Sbjct: 283 HHEYTPRKVFELMGSVVTQIACGRAHTLAL 312
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLV--PTCVAAL-VEPNFCRVACGHSLTVALTTSGHVYTMG 324
+F WG +G+LG G+ E + + P + L N V+CG + T L G VYT G
Sbjct: 1 MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S +GQLG ++ P V + + ++ CG H ++ + V+ WG + G++G
Sbjct: 61 SNEFGQLGQEKSHTN-PESVHA-IETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIG 118
Query: 385 HG---DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G + P +++ L V IACG N + A+ +
Sbjct: 119 LGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTI 157
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 176/369 (47%), Gaps = 25/369 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + P + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC-- 432
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFAHY 378
Query: 433 ---SGCRLP 438
CR P
Sbjct: 379 SNPQNCRPP 387
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
G + G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 59 GCNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+L G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLL--GSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIV-YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E + P + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYFPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ ++ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSF 375
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y+WG D GLLG + VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D +N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++++G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEEYIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V+SWG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYSWGLDS-DGQLG--------LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y+WG D GLLG + VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D +N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++++G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEEYIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V+SWG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYSWGLDS-DGQLG--------LLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYTGQCPPDIDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 176/369 (47%), Gaps = 25/369 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + P + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC-- 432
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPTDIDSEEYFCVKRIFSGGDQSFAHY 378
Query: 433 ---SGCRLP 438
CR P
Sbjct: 379 SNPQNCRPP 387
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
G + G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 59 GCNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+L G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLL--GSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIV-YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E + P + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYFPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 179/359 (49%), Gaps = 24/359 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA--ICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + + C +F + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F ++A G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG +S G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+LS++ I VACG YH+ A++ + +++ WG Y G LG G + ++ L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY--GQLGLGIDCKKQASPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
I+ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + +A G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ ++ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSF 375
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 175/357 (49%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ ++ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDYEEYFCVKRIFSGGDQSF 375
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 197/388 (50%), Gaps = 34/388 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V+ +ACGG H+ + + GEV++ G + G+LGH +S+ P+LI AL+ +I VACG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPELIGALAGQHIVHVACG 92
Query: 137 EYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
E H+ A++ G +++WG G+ GL + V+ VP+ + L + ISCG WH
Sbjct: 93 ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT--VPRLIK-KLNQQTILQISCGNWHC 149
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + GQ FT+G ++G LG G S + P+ V+SL G+ + A G H+ A+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG G+LG D+ + P V L ++CG T L
Sbjct: 206 --------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
T SG V+T G+ GQLG+ + ++ R +L S V +IACG +H +A + S +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVE---ALKDKQV--KSIACGTNFTAAICLHKWVSGVD 428
+G G G+LG G T + PS V+ A + Q+ K AC + I SG D
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHI-----FSGGD 372
Query: 429 QS--MCSGCR--LPFNNFKRKRHNCYNC 452
Q+ +CS LP ++F+ Y C
Sbjct: 373 QTFVLCSKYENSLPADDFRTINETRYTC 400
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 169/327 (51%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVL--HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G G + V+ P++ + + N++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH +E S P+ + G L G H+ ++CG H+ ++ GQ+F++G G+ G
Sbjct: 61 NTK--GQLGHESEGSK--PELI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +V++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ S+ V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG + T A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + S P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHESEGSKPELIGALAGQHIVHVACGESHSVALSDQ 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+VFSWG S G+LG D V P+LI L+ I ++CG +H A+ G +TWG
Sbjct: 103 GQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+Y G LG G E S P+RV L+GI ++ ++ G H+ ++ +G +F +G +
Sbjct: 163 QNSY--GQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG G C + P+ ++S + + +A GG H+ ++
Sbjct: 156 GQFFTWGQNSY-GQLGLG----KEC----PSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ S G+LG + D P + L + + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G VS I+CG HT A V S+G ++ FG GT
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 24/370 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GLLG +E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA--ICLH 421
A + S +Y++G G NG+LG G T +R SP V+ + + C +F + C+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVK 365
Query: 422 KWVSGVDQSM 431
+ SG DQS
Sbjct: 366 RIFSGGDQSF 375
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F ++A G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + +A G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 168/335 (50%), Gaps = 20/335 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI VACGE HT A+ G +Y WG D GL G+E VP+ + L I +
Sbjct: 83 AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V ++ACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 167/327 (51%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF WG+ G LG G++ C + P+ ++S + + +A GG H+ ++
Sbjct: 157 EVFCWGQNK-YGQLGLGID----C----QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F WG G+LG ++D P L+ +L + I + CGE HT A+T G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTF 212
G Y G LGH N SH + R L G V+ ++CG HT A V S+G++++FG G
Sbjct: 268 AGGY--GQLGH-NSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 213 GVLGHGDRKSVSIPREVE 230
G LG G + P V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ G+ F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ G+ F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKEGEFFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ G+ +
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K+GE F WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 175/364 (48%), Gaps = 47/364 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALS------------------NMNIELVACGE 137
EV++WG + G++GHG + P LI L + V CG
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+H+ D++ WG G + G LG E + + P VN ++ + ++S G H
Sbjct: 96 FHSVLFA-EQDVFVWGKG--DGGRLGIDTEFNQYKP-YVNPRIKRVQMAS--AGGLHNIA 149
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T G ++T+G G FG LGHG + +PR +E R V + G HTAAV E
Sbjct: 150 LTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTE----- 204
Query: 258 SSSSNCSSGKLFTWG-DGDKGRLGHG-----DKEAKLVPTCVAALVEPNFCRVACGHSLT 311
SG+L+TWG D +GRLGHG D+ A PT V AL P V CG T
Sbjct: 205 -------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVP-IALVYCGGFFT 256
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+ALT SG +++ G +LG+ +V L + ++ACG +H A LT +
Sbjct: 257 MALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGK 316
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
V TWG G NG+LGHG ++ P++VEA+ DK IACG +TAAI L+ W
Sbjct: 317 VITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNR 376
Query: 428 DQSM 431
D +
Sbjct: 377 DYQL 380
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 183/365 (50%), Gaps = 34/365 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+ CG H+ L +Q +VF WG+ GGRLG + + P + + +++ + G H
Sbjct: 91 VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGGLHN 147
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+T G++YTWG G FG LGHG+ +P+ + GP + + +S G HTA VT
Sbjct: 148 IALTEVGNVYTWGYGA--FGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHTAAVTE 204
Query: 201 AGQLFTFG-DGTFGVLGHG-----DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+G+L+T+G D G LGHG D ++S P +V++L + CG + T A+ +
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTK-- 261
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG+L++WG LGHG + P VAAL + +VACG AL
Sbjct: 262 ----------SGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311
Query: 315 TTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T G V T G GQLG+ + GK P VE K+ IACG A +T ++Y
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKT-CTYIACGPAWTAAITENGDLY 370
Query: 374 TWGKGANGRLG-HGDTDDRNSPSLV---EALKDK---QVKSIACGTNFTAAICLHKWVSG 426
TWGK + +LG G D++ P LV +AL +K +V ++CG N I +
Sbjct: 371 TWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPKPAQ 430
Query: 427 VDQSM 431
V QS+
Sbjct: 431 VTQSL 435
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 167/348 (47%), Gaps = 39/348 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG+G G G+ + + K + + VQ + GG H + +
Sbjct: 105 DVFVWGKGDG------------GRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTE 152
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G V++WG + G LGHG L P+L++ I V+ G HT AVT SG+LYTWG
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTWG 212
Query: 154 DGTYNFGLLGHGN-----EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
G LGHGN E + P +V + ++ + CG + T +T +GQL+++G
Sbjct: 213 RDE-GEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIALVYCGGFFTMALTKSGQLWSWG 269
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
LGHG R + P+ V +L+ + V+ ACG +H AA+ + GK+
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ------------DGKV 317
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
TWG G G+LGHG E P V A+ + +ACG + T A+T +G +YT G
Sbjct: 318 ITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377
Query: 329 GQLGNP-----QADGKLPNRVEGKLSKSFVEE--IACGSYHVAVLTSK 369
QLG P Q D L + K+ VE ++CG+ H + S+
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 15/226 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG G+G LG G + + + + +AL+ + L + CGG +
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKV-QALDVPIAL----VYCGGFFTMALT 260
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G+++SWG + LGHG ++ PK++ AL ++ + VACG +H A+T G + TW
Sbjct: 261 KSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---D 209
G G G LGHG + P V + + I+CGP TA +T G L+T+G D
Sbjct: 321 GYG--GNGQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377
Query: 210 GTFGVLGHGDRK----SVSIPREVESLKGLRTVRAACGVWHTAAVV 251
G+ G D + V P+ + + + +CG H +V
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA------------- 305
SS + +++ WG G G++GHG ++ + +P ++ L F +A
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 306 -----CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
CG +V L V+ G G+LG + V ++ + V+ + G
Sbjct: 88 NVGVTCGLFHSV-LFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGG 144
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H LT VYTWG GA G LGHG + P L+E ++ ++ G + TAA+
Sbjct: 145 LHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTE 204
Query: 420 ---LHKW 423
L+ W
Sbjct: 205 SGELYTW 211
>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 390
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 166/329 (50%), Gaps = 26/329 (7%)
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALSNMNIEL--VACGEYHTCAVTLSGDLYTWGDGTYN 158
G S GRLGHG + P L+ +L I+ V CG +H+ ++ G +YT G G
Sbjct: 72 GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKG 131
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
F LGH N+ + V+ L + V+ + H+ VVTS GQ+++FG G LGHG
Sbjct: 132 F--LGHKNQNNIRSFLLVDA-LASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHG 188
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
D +P +E L+G + V+ C H A + + +G++F WG G G+
Sbjct: 189 DDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD------------AGQVFMWGSGTDGK 236
Query: 279 LGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG 338
LG GD E+ P V AL + CG+ A+ GH++T G + G+LG+ +
Sbjct: 237 LGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEEN 296
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
+ + L++ + IACG+ H+A ++ +YTWGK A G+LGHGD DR+ P++V
Sbjct: 297 RTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVA 356
Query: 399 AL---------KDKQVKSIACGTNFTAAI 418
L +V ++CG N TA++
Sbjct: 357 TLLLAPSEDAPPRGRVAKVSCGANHTASL 385
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 14/196 (7%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
LP +E V C G H A++ G+VF WG + G+LG G + P L+ AL
Sbjct: 195 LPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHFAPVLVRAL 254
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
I+ + CG A+ + G L+TWG G G +E + VP V E + +
Sbjct: 255 EGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHG--DEENRTVPSLVTALAE-VPI 311
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL----------KGL 235
+I+CG H A ++ L+T+G G LGHGDR P V +L +G
Sbjct: 312 RAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG- 370
Query: 236 RTVRAACGVWHTAAVV 251
R + +CG HTA++V
Sbjct: 371 RVAKVSCGANHTASLV 386
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 91/178 (51%), Gaps = 22/178 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF+WG GT DG LG G N S F L +ALE +++I CG AA +N
Sbjct: 224 GQVFMWGSGT-DGKLGQGDNE--SHFA----PVLVRALEGK---GIKSIQCGYDFAAAIN 273
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+G +F+WG GGRLGHG + + P L+ AL+ + I +ACG H A++ LYTW
Sbjct: 274 VEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTW 333
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRV---------NGPLEGIHVSSISCGPWHTAVVTSA 201
G G LGHG+ P V + P G V+ +SCG HTA + SA
Sbjct: 334 GKNAE--GQLGHGDRHDRHGPTVVATLLLAPSEDAPPRG-RVAKVSCGANHTASLVSA 388
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 174/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGHG + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G D S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGHG E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHGREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 168/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHGREGNKPEQIGALADQHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G + S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKDFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHRGQLSATADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKDFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 24/370 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GLLG +E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA--ICLH 421
A + S +Y++G G NG+LG G T +R SP V+ + + C +F + C+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVK 365
Query: 422 KWVSGVDQSM 431
+ SG DQS
Sbjct: 366 RIFSGGDQSF 375
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F ++A G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + +A G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +LV F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 146/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG +S G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+LS++ I VACG YH+ A++ + +++ WG Y G LG G + ++ L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY--GQLGLGLDCKKQTSPQLIKSLVGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE----ALKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
+G G NG+LG G T +R SP V+ A + + I F C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYAYNGQCLPDIDSEEYF----CVKRIFSGGDQS 374
Query: 431 M 431
Sbjct: 375 F 375
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N I V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 119/370 (32%), Positives = 183/370 (49%), Gaps = 24/370 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GLLG +E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA--ICLH 421
A + S +Y++G G NG+LG G T +R SP V+ + + C +F + C+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVK 365
Query: 422 KWVSGVDQSM 431
+ SG DQS
Sbjct: 366 RIFSGGDQSF 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F ++A G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + +A G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 179/359 (49%), Gaps = 24/359 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA--ICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + + C +F + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F ++A G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI I+ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + +A G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +LV F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 179/359 (49%), Gaps = 24/359 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA--ICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + + C +F + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKG--NWFPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F ++A G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 146/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG +S G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+LS++ I VACG YH+ A++ + +++ WG Y G LG G + ++ L GI
Sbjct: 133 SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY--GQLGLGIDCKKQASPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
I+ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + +A G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ NI VACGE
Sbjct: 83 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQNIVHVACGE 140
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 141 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 197
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 198 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 252
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 253 -------SLSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 365
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 366 FGCGARGQLGTGHTCNVKCPSPVK 389
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 168/328 (51%), Gaps = 28/328 (8%)
Query: 101 GEESGGRLGH---GVDSD----VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+E+G LG G+ ++ V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 47 GKENGNDLGASQPGISTNLRGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG 106
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
T G LGH E + P+++ G L ++ ++CG H+ ++ GQLF++G G+ G
Sbjct: 107 LNTK--GQLGHEREGNK--PEQI-GALADQNIVHVACGESHSLALSDRGQLFSWGAGSDG 161
Query: 214 VLG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 162 QLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWG 209
Query: 273 DGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQL
Sbjct: 210 KNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQL 269
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 270 GLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMND 328
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 329 EVNPRRVLELMGSEVTQIACGRQHTLAF 356
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + ++ ++ACG H+ ++ +
Sbjct: 94 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQNIVHVACGESHSLALSDR 149
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 150 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 209
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 210 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNA 266
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 267 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 314
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 315 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 374
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 375 GTGHTCNVKCPSPVKGYWAAHNGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 429
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 203 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 253
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF+WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 314 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 370
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 371 RGQLGTGHTCNVKCPSPVK 389
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 188/363 (51%), Gaps = 26/363 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 94
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A++ G L++WG G+ G LGH R+ L + +SCG WH
Sbjct: 95 SHSLALSDQGQLFSWGAGSD--GQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 198 VTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+ + GQ FT+G G LG G + S + P+ V+SL+G+ + A G H+ A+
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL------ 206
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG +F WG + G+LG D+ + P V L ++CG T LT
Sbjct: 207 ------SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK 260
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTW 375
SG V+T G+ +GQLG+ + ++ R +L S V +IACG H +A + S +Y +
Sbjct: 261 SGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320
Query: 376 GKGANGRLGHGDTDDRNSPSLVE---ALKDKQVKSIACGTNFTAAICLHKWVSGVDQS-- 430
G GA G+LG G T + PS V+ A + Q+ S A +F I H + SG DQ+
Sbjct: 321 GCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRA--DSFKYHIVKHIF-SGGDQTFV 377
Query: 431 MCS 433
+CS
Sbjct: 378 LCS 380
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 168/329 (51%), Gaps = 26/329 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD----VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ WG S G G G+ S+ V P+ +S+ +I+ VACG H+ + G++YT
Sbjct: 1 MLCWGYWSLGHPG-GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTC 59
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+
Sbjct: 60 GSNTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 114
Query: 213 GVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGH + SV+IPR ++ L ++ +CG WH A+ + G+ FTW
Sbjct: 115 GQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALA------------ADGQFFTW 162
Query: 272 GDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQ
Sbjct: 163 GQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQ 222
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +
Sbjct: 223 LGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMN 281
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
D +P V L +V IACG T A
Sbjct: 282 DEVNPRRVLELMGSEVTQIACGRQHTLAF 310
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 147/293 (50%), Gaps = 19/293 (6%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-V 116
G + + + P+ + + + ++ACG H+ ++ QG++FSWG S G+LGH D V
Sbjct: 67 LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSV 126
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKR 175
P+LI L+ I V+CG +H A+ G +TWG + G LG G E S P+R
Sbjct: 127 AIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRH--GQLGLGKEFPSQASPQR 184
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V LEGI ++ ++ G H+ ++ +G +F +G G LG D P V+ L+
Sbjct: 185 VKS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQ 243
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
+ V +CG HTA + + SG +FT+G G G+LGH ++ P V
Sbjct: 244 KVVYISCGEEHTAVLTK------------SGGVFTFGAGSFGQLGHDSMNDEVNPRRVLE 291
Query: 296 LVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEG 346
L+ ++ACG T+A +SG +Y G GQLG + K P+ V+G
Sbjct: 292 LMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ G LG +G F + K+LE + + +A GG H+ ++
Sbjct: 157 GQFFTWGQNR-HGQLG-----LGKEFPSQASPQRVKSLEG---IPLAQVAAGGAHSFALS 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG ++D P + L + ++CGE HT +T SG ++T+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ FG LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 268 GAGS--FGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
GH + S + G + PQA G + +R ++E+ACG H L EVYT G
Sbjct: 10 GHPGGISSNLQGIVTEPQAYGFISDRS--------IKEVACGGNHSIFLLEDGEVYTCGS 61
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
G+LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 62 NTKGQLGH--EREGNKPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSD 114
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 175/376 (46%), Gaps = 35/376 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++CG H+ + G V SWG G+LGHG P I AL++ ++ V CG
Sbjct: 12 VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71
Query: 138 YHTCAVTLS-GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+T AV S G +Y+WG G +FG LGHG +VP+ + G V+ ++CG HT
Sbjct: 72 EYTVAVASSRGQIYSWGWG--DFGRLGHGECGDVFVPRPI-AFFSGRPVARVACGDTHTL 128
Query: 197 VVTSA-GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
VVT G L+TFG G LG G P+ V +L+G R ACG H+ A E
Sbjct: 129 VVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE--- 185
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+G +F+WG G G LG GD + + PT V L V CG + +T
Sbjct: 186 ---------AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT 236
Query: 316 TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G V+T G YGQLG+ D P V G L V +A G H S+ +Y
Sbjct: 237 DEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAG-LQHCRVSTVAGGWRHTMAADSEGNLYA 295
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKD------------KQVKSIACGTNFTAAIC--- 419
WG G+LG GD++DR +P+ V ++V +ACG T A+
Sbjct: 296 WGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG 355
Query: 420 -LHKWVSGVDQSMCSG 434
++ W GV+ + G
Sbjct: 356 EVYSWGRGVNGQLGHG 371
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/372 (33%), Positives = 170/372 (45%), Gaps = 39/372 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH-AALV 91
G V WG G DG LG G + P + + V + CG + A+
Sbjct: 29 GVVASWGRGE-DGQLG---------HGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVA 78
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL-SGDLY 150
+ +G+++SWG GRLGHG DV P+ I S + VACG+ HT VT G LY
Sbjct: 79 SSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALY 138
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
T+G LGH N+ P+ V L+G VSS++CG H+ T AG +F++G G
Sbjct: 139 TFGRNQNGQLGLGHTNDCLS--PQLVT-ALQGERVSSVACGSEHSLAATEAGTVFSWGWG 195
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LG GD + P V L G+ CG H+A V + G++FT
Sbjct: 196 RYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTD------------EGRVFT 243
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G G+LGHGD P VA L VA G T+A + G++Y G +GQ
Sbjct: 244 FGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQ 303
Query: 331 LG-NPQADGKLPNRVEG-----------KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
LG D P V G + V +ACG H +T EVY+WG+G
Sbjct: 304 LGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRG 363
Query: 379 ANGRLGHGDTDD 390
NG+LGHG D
Sbjct: 364 VNGQLGHGAEQD 375
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 111/239 (46%), Gaps = 12/239 (5%)
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
E V +SCG H+ + G + ++G G G LGHG + P + +L
Sbjct: 8 EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG +T AV S G++++WG GD GRLGHG+ VP +A
Sbjct: 68 VCGAEYTVAVAS-----------SRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRP 116
Query: 301 FCRVACGHSLTVALTT-SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
RVACG + T+ +T G +YT G GQLG + L ++ L V +ACG
Sbjct: 117 VARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACG 176
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H T V++WG G G LG GD+ DR +P+ V L V S+ CG +A +
Sbjct: 177 SEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVV 235
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 17 VSSSSQGSGHD-DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
VSS + GS H G VF WG G G LG G ++ D P +
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGR-YGNLGDGDSQ---------DRYTPTRVVGLDG 219
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ V ++ CG RH+A+V +G VF++G G+LGHG D P L+ L + + VA
Sbjct: 220 VTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAG 279
Query: 136 GEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGI----------- 183
G HT A G+LY WG +N FG LG G+ P V G
Sbjct: 280 GWRHTMAADSEGNLYAWG---WNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPR 336
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
V+ ++CG HT VT AG+++++G G G LGHG + +
Sbjct: 337 RVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE----ALKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
+G G NG+LG G T +R SP V+ A + + I F C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYAYNGQCLPDIDSEEYF----CVKRIFSGGDQS 374
Query: 431 M 431
Sbjct: 375 F 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N I V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 117/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE----ALKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
+G G NG+LG G T +R SP V+ A + + I F C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYAYNGQCLPDIDSEEYF----CVKRIFSGGDQS 374
Query: 431 M 431
Sbjct: 375 F 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N I V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 152/303 (50%), Gaps = 26/303 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLG 332
QLG
Sbjct: 326 QLG 328
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F++G +G LG G D + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F+W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFSW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + P + +L F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ ++ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 161/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG Y G LG G + + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 SWGQNKY--GQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 131/262 (50%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G+D + P+LI +L+ + VA G H+ +TLSG ++
Sbjct: 154 KASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRTQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +LV F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 180/367 (49%), Gaps = 28/367 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
D+F WG T G LG G G++ ++ L P+ L+ ++Q IACG + ++
Sbjct: 27 DMFCWG-STIHGELGLG--------GIEDENILIPRELDFKKAAEIQQIACGENYTVVIT 77
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ GE++S G G+LGH L +LI L + ACG YHT A+ G L++W
Sbjct: 78 QIGEIYSCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G T G LG ++ R+ L V I+CG H +T+ G+L+++G +
Sbjct: 136 GSNTE--GQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSE 193
Query: 213 GVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G D K P+ + + G+ ACG +H+ A+ SG +F W
Sbjct: 194 GQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAI------------SKSGAVFGW 241
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D + + +P + L C ACG +V LT G V+T G+ +YGQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ T
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361
Query: 391 RNSPSLV 397
+P +V
Sbjct: 362 VTTPQVV 368
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 167/335 (49%), Gaps = 27/335 (8%)
Query: 91 VNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
++K+ ++F WG G LG G D ++L P+ +D I+ +ACGE +T +T G+
Sbjct: 22 LHKKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGE 81
Query: 149 LYTWGDGTYNFGLLGH--GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
+Y+ G+ Y G LGH G + +P L+ +CG +HT + GQLF+
Sbjct: 82 IYSCGNNDY--GQLGHEKGRKRLQLIPG-----LDAFVFKKAACGAYHTLAINEWGQLFS 134
Query: 207 FGDGTFGVLGHGDRKSV-SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+G T G LG + + S PR V++L V+ ACG+ H A+ ++
Sbjct: 135 WGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT------------NN 182
Query: 266 GKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G+L++WG +G+LG G D + ++ P ++A + +ACG ++A++ SG V+ G
Sbjct: 183 GELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWG 242
Query: 325 SPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+GQLG N D LP +++ L + + ACG LT V+T G G G+L
Sbjct: 243 KNTFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GHG + P V L V I+CG T A+
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLAL 336
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GLLG +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G+LG + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +LV F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG G + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 175/364 (48%), Gaps = 47/364 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALS------------------NMNIELVACGE 137
EV++WG + G++GHG + P LI L + V CG
Sbjct: 36 EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+H+ D++ WG G + G LG E + + P VN ++ + ++S G H
Sbjct: 96 FHSVLFA-EQDVFVWGKG--DGGRLGIDTEFNQYKP-YVNPRIKRVQMAS--AGGLHNIA 149
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T G ++T+G G FG LGHG + +PR +E R V + G H+AAV E
Sbjct: 150 LTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTE----- 204
Query: 258 SSSSNCSSGKLFTWG-DGDKGRLGHG-----DKEAKLVPTCVAALVEPNFCRVACGHSLT 311
SG+L+TWG D +GRLGHG D+ A PT V AL P V CG T
Sbjct: 205 -------SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVP-IASVYCGGFFT 256
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+ALT SG +++ G +LG+ +V L + ++ACG +H A LT +
Sbjct: 257 MALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGK 316
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
V TWG G NG+LGHG ++ P++VEA+ DK IACG +TAAI L+ W
Sbjct: 317 VITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNR 376
Query: 428 DQSM 431
D +
Sbjct: 377 DYQL 380
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 183/365 (50%), Gaps = 34/365 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+ CG H+ L +Q +VF WG+ GGRLG + + P + + +++ + G H
Sbjct: 91 VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGGLHN 147
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+T G++YTWG G FG LGHG+ +P+ + GP + + +S G H+A VT
Sbjct: 148 IALTEVGNVYTWGYGA--FGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHSAAVTE 204
Query: 201 AGQLFTFG-DGTFGVLGHG-----DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+G+L+T+G D G LGHG D ++S P +V++L + CG + T A+ +
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPIASVYCGGFFTMALTK-- 261
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG+L++WG LGHG + P VAAL + +VACG AL
Sbjct: 262 ----------SGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311
Query: 315 TTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T G V T G GQLG+ + GK P VE K+ IACG A +T ++Y
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKT-CTYIACGPAWTAAITENGDLY 370
Query: 374 TWGKGANGRLG-HGDTDDRNSPSLV---EALKDK---QVKSIACGTNFTAAICLHKWVSG 426
TWGK + +LG G D++ P LV +AL +K +V ++CG N I +
Sbjct: 371 TWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSRPKPAQ 430
Query: 427 VDQSM 431
V QS+
Sbjct: 431 VTQSL 435
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 168/348 (48%), Gaps = 39/348 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DVF+WG+G G G+ + + K + + VQ + GG H + +
Sbjct: 105 DVFVWGKGDG------------GRLGIDTEFNQYKPYVNPRIKRVQMASAGGLHNIALTE 152
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G V++WG + G LGHG L P+L++ I V+ G H+ AVT SG+LYTWG
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWG 212
Query: 154 DGTYNFGLLGHGN-----EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
G LGHGN E + P +V + ++S+ CG + T +T +GQL+++G
Sbjct: 213 RDE-GEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIASVYCGGFFTMALTKSGQLWSWG 269
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
LGHG R + P+ V +L+ + V+ ACG +H AA+ + GK+
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ------------DGKV 317
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
TWG G G+LGHG E P V A+ + +ACG + T A+T +G +YT G
Sbjct: 318 ITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377
Query: 329 GQLGNP-----QADGKLPNRVEGKLSKSFVEE--IACGSYHVAVLTSK 369
QLG P Q D L + K+ VE ++CG+ H + S+
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVSR 425
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS---SLPKALESAVVLDVQNIACGGRHAA 89
G+++ WG G+G LG G + MD S P ++ A+ + + ++ CGG
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDI-------MDEGALSRPTKVQ-ALDVPIASVYCGGFFTM 257
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ K G+++SWG + LGHG ++ PK++ AL ++ + VACG +H A+T G +
Sbjct: 258 ALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKV 317
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG- 208
TWG G G LGHG + P V + + I+CGP TA +T G L+T+G
Sbjct: 318 ITWGYG--GNGQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWGK 374
Query: 209 --DGTFGVLGHGDRK----SVSIPREVESLKGLRTVRAACGVWHTAAVV 251
D G+ G D + V P+ + + + +CG H +V
Sbjct: 375 NRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA------------- 305
SS + +++ WG G G++GHG ++ + +P ++ L F +A
Sbjct: 28 SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87
Query: 306 -----CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
CG +V L V+ G G+LG + V ++ + V+ + G
Sbjct: 88 NVGVTCGLFHSV-LFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASAGG 144
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC- 419
H LT VYTWG GA G LGHG + P L+E ++ ++ G + +AA+
Sbjct: 145 LHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTE 204
Query: 420 ---LHKW 423
L+ W
Sbjct: 205 SGELYTW 211
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 168/335 (50%), Gaps = 20/335 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI VACGE HT A+ G +Y WG D GL G+E VP+ + L I +
Sbjct: 83 AQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V ++ACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 20/335 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GL G+E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G + + + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 167/327 (51%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G E ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G++ P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF WG+ G LG G+ C + P+ ++S + + +A GG H+ ++
Sbjct: 157 EVFCWGQNK-YGQLGLGIE----C----QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F WG G+LG ++D P L+ +L + I + CGE HT A+T G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTF 212
G Y G LGH N SH + R L G V+ I+CG HT A V S+G++++FG G
Sbjct: 268 AGGY--GQLGH-NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 213 GVLGHGDRKSVSIPREVE 230
G LG G + P V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 174/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ S GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ YGQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ S G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------ASDGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 37/358 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + K P+ V+G + V++I G VL SK E Y+
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYS 385
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+Y G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGSY--GQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 180/367 (49%), Gaps = 28/367 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
D+F WG T G LG G G++ ++ L P+ L+ ++Q IACG + ++
Sbjct: 27 DMFCWG-STIHGELGLG--------GIEDENILIPRELDFKKAAEIQQIACGENYTVVIT 77
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ GE++S G G+LGH L +LI L + ACG YHT A+ G L++W
Sbjct: 78 QIGEIYSCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G T G LG ++ R+ L V I+CG H +T+ G+L+++G +
Sbjct: 136 GSNTE--GQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSE 193
Query: 213 GVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G D K P+ + + G+ ACG +H+ A+ SG +F W
Sbjct: 194 GQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAI------------SKSGAVFGW 241
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D + + +P + L C ACG +V LT G V+T G+ +YGQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ T
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361
Query: 391 RNSPSLV 397
+P +V
Sbjct: 362 VTTPQVV 368
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 167/335 (49%), Gaps = 27/335 (8%)
Query: 91 VNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
++K+ ++F WG G LG G D ++L P+ +D I+ +ACGE +T +T G+
Sbjct: 22 LHKKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGE 81
Query: 149 LYTWGDGTYNFGLLGH--GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
+Y+ G+ Y G LGH G + +P L+ +CG +HT + GQLF+
Sbjct: 82 IYSCGNNDY--GQLGHEKGRKRLQLIPG-----LDAFVFKKAACGAYHTLAINEWGQLFS 134
Query: 207 FGDGTFGVLGHGDRKSV-SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+G T G LG + + S PR V++L V+ ACG+ H A+ ++
Sbjct: 135 WGSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT------------NN 182
Query: 266 GKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G+L++WG +G+LG G D + ++ P ++A + +ACG ++A++ SG V+ G
Sbjct: 183 GELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWG 242
Query: 325 SPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+GQLG N D LP +++ L + + ACG LT V+T G G G+L
Sbjct: 243 KNTFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GHG + P V L V I+CG T A+
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLAL 336
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V EIACG H + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
G + G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 59 GCNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++ G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLV--GSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+
Sbjct: 281 HEINPRKVFELMGSIVTEIACGRQHTSTF 309
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 157/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +ACG T +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G ACG HT+ V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTEIACGRQHTSTFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 174/340 (51%), Gaps = 24/340 (7%)
Query: 62 MDSSL--PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
MDS + P + VVL ++ G H+ + + SWG G+LGHG D L P
Sbjct: 1 MDSVMAAPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVP 56
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
++ I V CG HT A + +Y+WG G +FG LGHGN + P+ V
Sbjct: 57 TVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWG--DFGRLGHGNSSDVFTPQPVKA 114
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
L+G+ + I+CG H VT AG++ ++G G LG G + +P+++++ + +
Sbjct: 115 -LQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVK 173
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
A G HTAAV E G L+ WG G G LG GD+ +L+P V+++
Sbjct: 174 MIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEG 221
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIA 357
VACG T+ ++ SG++YT G YGQLG+ + L P++VE L S + +I+
Sbjct: 222 EKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVE-ALKDSTISQIS 280
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
G H LTS+ ++Y WG G++G G+ DD +SP V
Sbjct: 281 GGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQV 320
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 143/291 (49%), Gaps = 18/291 (6%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+ LV+ G H+ A+ L +WG G G LGHG+ VP ++G + ++S+
Sbjct: 15 VVLVSAGASHSVALLTGNVLCSWGRG--EDGQLGHGDAEDRLVPTVLSG-FDAPAITSVI 71
Query: 190 CGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
CG HT A Q++++G G FG LGHG+ V P+ V++L+GL+ + ACG H
Sbjct: 72 CGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCL 131
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
AV +G++ +WG G+LG G E L+P + A +A G
Sbjct: 132 AVT------------MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGA 179
Query: 309 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
T A+T G +Y G YG LG + D LP +V + V +ACG H ++
Sbjct: 180 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVL-VACGWRHTITVS 238
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+YT+G G+LGHGD +D P VEALKD + I+ G T A+
Sbjct: 239 DSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL 289
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 133/261 (50%), Gaps = 27/261 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G R+G G D P+ +++ L ++ IACG H V
Sbjct: 87 VYSWGWGD--------FGRLG--HGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMA 136
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV SWG G+LG G D L P+ I A ++ ++++A G HT AVT GDLY WG
Sbjct: 137 GEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGW 196
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G Y G LG G+ +P++V+ +EG + ++CG HT V+ +G L+T+G +G
Sbjct: 197 GRY--GNLGLGDRNDRLLPEKVS-SVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQ 253
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVW-HTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD + +P +VE+LK T+ G W HT A+ S GKL+ WG
Sbjct: 254 LGHGDFEDHLVPHKVEALKD-STISQISGGWRHTMALT------------SEGKLYGWGW 300
Query: 274 GDKGRLGHGDKEAKLVPTCVA 294
G++G G+ + P V+
Sbjct: 301 NKFGQVGVGNNDDHSSPGQVS 321
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
GD++ WG G R G+ G + D LP+ + S + +ACG RH V
Sbjct: 189 GDLYGWGWG-----------RYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITV 237
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G ++++G G+LGHG D L P ++AL + I ++ G HT A+T G LY
Sbjct: 238 SDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYG 297
Query: 152 WGDGTYN-FGLLGHGNEVSHWVPKRVNGP 179
WG +N FG +G GN H P +V+ P
Sbjct: 298 WG---WNKFGQVGVGNNDDHSSPGQVSFP 323
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
V+ G S +VAL T + + G GQLG+ A+ +L V + + CG+ H
Sbjct: 18 VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77
Query: 364 AVLTS-KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ + +VY+WG G GRLGHG++ D +P V+AL+ ++K IACG + A+ +
Sbjct: 78 TAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTM 135
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 195/388 (50%), Gaps = 34/388 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V+ +ACGG H+ + + GEV++ G + G+LGH D + P+ I AL+ +I VACG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEGSKPEQIGALAGQHIVHVACG 92
Query: 137 EYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
E H+ A++ G L++WG G+ GL + V+ VP+ + L + +SCG WH
Sbjct: 93 ESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVT--VPRLIK-KLNQQTILQVSCGNWHC 149
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + GQ FT+G ++G LG G S + P+ V+SL G+ + A G H+ A+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG G+LG D+ + P V L ++CG T L
Sbjct: 206 --------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
T SG V+T G+ GQLG+ + ++ R +L S V +IACG +H +A + S +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVE---ALKDKQV--KSIACGTNFTAAICLHKWVSGVD 428
+G G G+LG G T + PS V+ A + Q+ K AC + I SG D
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHI-----FSGGD 372
Query: 429 QS--MCSGCR--LPFNNFKRKRHNCYNC 452
Q+ +CS LP ++F+ Y C
Sbjct: 373 QTFVLCSKYENSLPADDFRTINETRYTC 400
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVL--HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G G + V+ P++ + + N++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E S P+++ G L G H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHDCEGSK--PEQI-GALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +V++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ S+ V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG + T A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 158/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + S P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQ 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+Y G LG G E S P+RV L+GI ++ ++ G H+ ++ +G +F +G +
Sbjct: 163 QNSY--GQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG G C + P+ ++S + + +A GG H+ ++
Sbjct: 156 GQFFTWGQNSY-GQLGLG----KEC----PSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ S G+LG + D P + L + + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G VS I+CG HT A V S+G ++ FG GT
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 324 GSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G YGQ G N Q P +V G + V+E+ACG H L EVYT G
Sbjct: 5 GYSSYGQPGIGSNLQVIIPEP-QVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
G+LGH + + P + AL + + +ACG + + A+ L W +G D
Sbjct: 64 GQLGHD--CEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSD 113
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI VACGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G+E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI VACGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G+E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/324 (34%), Positives = 174/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ S GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ YGQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHVREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ S G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------ASDGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 37/358 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G V+ + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQLGHVR-EGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + K P+ V+G + V++I G VL SK E Y+
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYS 385
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+Y G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGSY--GQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 188/363 (51%), Gaps = 26/363 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 37 IKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 94
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A++ G L++WG G+ G LGH R+ L + +SCG WH
Sbjct: 95 SHSLALSDQGQLFSWGAGSD--GQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMA 152
Query: 198 VTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+ + GQ FT+G G LG G + S + P+ V+SL+G+ + A G H+ A+
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL------ 206
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG +F WG + G+LG D+ + P V L ++CG T LT
Sbjct: 207 ------SLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK 260
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTW 375
SG V+T G+ +GQLG+ + ++ R +L S V +IACG H +A + S +Y +
Sbjct: 261 SGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320
Query: 376 GKGANGRLGHGDTDDRNSPSLVE---ALKDKQVKSIACGTNFTAAICLHKWVSGVDQS-- 430
G GA G+LG G T + PS V+ A + Q+ S A +F I H + SG DQ+
Sbjct: 321 GCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRA--DSFKYHIVKHIF-SGGDQTFV 377
Query: 431 MCS 433
+CS
Sbjct: 378 LCS 380
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 168/329 (51%), Gaps = 26/329 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD----VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ WG S G G G+ S+ V P+ +S+ +I+ VACG H+ + G++YT
Sbjct: 1 MLCWGYWSLGHPG-GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTC 59
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+
Sbjct: 60 GLNTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 114
Query: 213 GVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGH + SV+IPR ++ L ++ +CG WH A+ + G+ FTW
Sbjct: 115 GQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMAL------------AADGQFFTW 162
Query: 272 GDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQ
Sbjct: 163 GQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQ 222
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +
Sbjct: 223 LGLSDETDRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMN 281
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
D +P V L +V IACG T A
Sbjct: 282 DEVNPRRVLELMGSEVTQIACGRQHTLAF 310
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+F+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ Q
Sbjct: 48 IFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQ 103
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LGH D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 104 GQLFSWGAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWG 163
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 164 QNRH--GQLGLGKEFPSQASPQRVKS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNA 220
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 221 GQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 268
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 269 AGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 328
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 329 GTGHTCNVKCPSPVKG 344
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ G LG +G F + K+LE + + +A GG H+ ++
Sbjct: 157 GQFFTWGQNR-HGQLG-----LGKEFPSQASPQRVKSLEG---IPLAQVAAGGAHSFALS 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG ++D P + L + ++CGE HT +T SG ++T+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ FG LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 268 GAGS--FGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
GH + S + G + PQA G + +R ++E+ACG H L EVYT G
Sbjct: 10 GHPGGISSNLQGIVTEPQAYGFISDRS--------IKEVACGGNHSIFLLEDGEVYTCGL 61
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
G+LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 62 NTKGQLGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSD 114
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI VACGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G+E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 283 INPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 167/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK +A D Q I G +++
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKILQ----------PKL--AATFADAQTIEAGQYCTFVISS 430
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + I+ V+ + HT A T G+++
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A V+ G+L+T+G+G
Sbjct: 491 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 548
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 549 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 595
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P V AL +V G ++ALT++G VY G
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 655
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + V +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 656 CGSSEATALRPKLIE-ELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 714
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 715 PITKPKKVVGLDGVAIQQISAGTSHSLA 742
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 170/337 (50%), Gaps = 25/337 (7%)
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
A +V++ EV+ WG S +L G +L PKL A + + + + G+Y T ++
Sbjct: 374 EAPVVSETCEVYVWGSNSSHQLVEGTQEKILQPKL--AATFADAQTIEAGQYCTFVISSD 431
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGI-HVSSISCGPWHTAVVTSAGQL 204
G + G G+Y G LG G+ + K++ P I VSS HT T+ G++
Sbjct: 432 GSVRACGKGSY--GRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEV 489
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
F++GDG +G LGHG+ + P+ ++ L+G V + G H+AAV E
Sbjct: 490 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE----------- 538
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYT 322
G+L+TWG+GD GRLGHGD ++ +PT V + N V+CG S T+AL+ G V++
Sbjct: 539 -DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGRTVWS 595
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G G+LG+ + +V L F+ ++ GS LTS +VY WG GA
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC-- 653
Query: 383 LGHGDTDDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
LG G ++ P L+E L +V I+ G + A+
Sbjct: 654 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL 690
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 150/303 (49%), Gaps = 34/303 (11%)
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
V+ + ++Y WG + + L G + PK + +I G + T V++S G
Sbjct: 378 VSETCEVYVWGSNSSH--QLVEGTQEKILQPKLAATFADA---QTIEAGQYCTFVISSDG 432
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV-WHTAAVVEVMVGNSS 259
+ G G++G LG GD + S +++ E + ++ V ++ G HT A
Sbjct: 433 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT-------- 484
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSG 318
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A++ G
Sbjct: 485 ----TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDG 540
Query: 319 HVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWG 376
+YT G +G+LG+ ++ + +P V+ S V E++CGS H L+ V+++G
Sbjct: 541 ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFG 597
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMC 432
G NG+LGHGDT+ P +VEAL+ ++ + G+ + A+ ++ W G C
Sbjct: 598 GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----C 653
Query: 433 SGC 435
GC
Sbjct: 654 LGC 656
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 471 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 521
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V++ GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 522 VVVCV---SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 576
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK V L+G+ + + G
Sbjct: 577 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVVEA-LQGMFIRKVCAGSQ 634
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 635 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLAL-- 690
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
+++ WG+ G+ G G+ + P V L +++ G S +
Sbjct: 691 ----------SHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVVGLDGVAIQQISAGTSHS 740
Query: 312 VALT 315
+A T
Sbjct: 741 LAWT 744
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 571 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVVEA 620
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ +
Sbjct: 621 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELATTRVV 678
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H A++ ++Y WG+ + G G GN PK+V G L+G+ + IS
Sbjct: 679 DISIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVVG-LDGVAIQQISA 735
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 736 GTSHSLAWTA 745
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 189/388 (48%), Gaps = 34/388 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG + + G L ++ + L + D Q I G V+
Sbjct: 372 VYVWGSNSSHQLAEGTLEKI-------LQPKLAQGFS-----DAQMIEAGQYCTFSVSAD 419
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLYT 151
G V + G+ S GRLG G ++ PK + + V+ + HT AVT G++++
Sbjct: 420 GAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFS 479
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WGDG Y G LGHGN + PK + GPL G V +S G H+A VT+ G+L+T+G+G
Sbjct: 480 WGDGDY--GKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGD 537
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FT 270
FG LGH D S ++P V+ + G+ V ACG HT AV + G++ ++
Sbjct: 538 FGRLGHSDSHSRNVPTLVKDISGVGQV--ACGSSHTIAVAQ------------DGRIVWS 583
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G V+ G
Sbjct: 584 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 643
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P +E +LS + + +I+CG H L+ + EV+ WG A G+ G G T
Sbjct: 644 CGSSETTSLRPRLIE-ELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTST 702
Query: 391 R-NSPSLVEALKDKQVKSIACGTNFTAA 417
P V L+ ++ I GT+ + A
Sbjct: 703 PVTKPKKVIGLEGVSIQQITAGTSHSLA 730
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 23/326 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+ WG S +L G +L PKL S+ +++ G+Y T +V+ G + G G+
Sbjct: 372 VYVWGSNSSHQLAEGTLEKILQPKLAQGFSDA--QMIEAGQYCTFSVSADGAVKACGKGS 429
Query: 157 YNFGLLGHGNEVSHWVPKRV--NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LG G+ + +PK++ P VSS HT VT+ G++F++GDG +G
Sbjct: 430 Y--GRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGK 487
Query: 215 LGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+ + P+ ++ L G V + G H+AAV + G+L+TWG+
Sbjct: 488 LGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVT------------NDGELYTWGE 535
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQLG 332
GD GRLGH D ++ VPT V + +VACG S T+A+ G V++ G G+LG
Sbjct: 536 GDFGRLGHSDSHSRNVPTLVKDI--SGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLG 593
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ + +V L + ++ GS LTS +V+ WG G+ G +T
Sbjct: 594 HGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTSLR 653
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
P L+E L ++ I+CG + A+
Sbjct: 654 -PRLIEELSITKIIDISCGDSHCLAL 678
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 146/324 (45%), Gaps = 38/324 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG G R G +S+P S + Q + CG LV
Sbjct: 3861 EVYLWGNG-----------RHGQLADAGTSASVPTLAPS--LSQTQQVVCGQNCTFLVQA 3907
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI-ELVAC--GEYHTCAVTLSGDLY 150
G V + GE S GRLG G D+ P +I AL + +LV + H+ A+T +G+++
Sbjct: 3908 NGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVF 3967
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN PK++ G L+G V ++CG H+AVVT+ G+LFTFG G
Sbjct: 3968 SWGDGDY--GKLGHGNSERQRRPKQIEG-LQGEEVVQLACGFKHSAVVTADGKLFTFGSG 4024
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV----------------WHTAAVVEVM 254
G LG + IP V +L G + G+ + ++
Sbjct: 4025 DSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIA 4084
Query: 255 VGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
VG S +G ++ WG + +LG G P V L N +++ G + A
Sbjct: 4085 VGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQISAGRCHSSA 4144
Query: 314 LTTSGHVYTMGSPVYG-QLGNPQA 336
TT + T S G QLG PQ+
Sbjct: 4145 WTTPA-LSTRASGCSGIQLGLPQS 4167
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 133/321 (41%), Gaps = 57/321 (17%)
Query: 148 DLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
++Y WG+G + G V P + CG T +V + G +
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASVPTLAPSLS-------QTQQVVCGQNCTFLVQANGTVLA 3913
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW---HTAAVVEVMVGNSSSSNC 263
G+G++G LG G+ + P + +L+G + H+ A+ E
Sbjct: 3914 VGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTE----------- 3962
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
+G++F+WGDGD G+LGHG+ E + P + L ++ACG + +T G ++T
Sbjct: 3963 -TGEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTF 4021
Query: 324 GSPVYGQLGNPQADGKL-PNRVEG----------------------------KLSKSFVE 354
GS G+LG K+ P RV L F+E
Sbjct: 4022 GSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIE 4081
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
+IA G H+ L++ +VY WG +LG G ++ P LV L+ K ++ I+ G
Sbjct: 4082 DIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQISAGRCH 4141
Query: 415 TAAICLHKWVSGVDQSMCSGC 435
++A W + + SGC
Sbjct: 4142 SSA-----WTTPALSTRASGC 4157
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 26/293 (8%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+Y WG + + L G PK G + I G + T V++ G + G
Sbjct: 372 VYVWGSNSSH--QLAEGTLEKILQPKLAQGFSDA---QMIEAGQYCTFSVSADGAVKACG 426
Query: 209 DGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV-WHTAAVVEVMVGNSSSSNCSS 265
G++G LG GD + S+P+++ E + +R V ++ G HT AV +
Sbjct: 427 KGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVT------------AE 474
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G++F+WGDGD G+LGHG+ + P + L+ V+ G+ + A+T G +YT G
Sbjct: 475 GEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWG 534
Query: 325 SPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGR 382
+G+LG+ + + +P V+ S V ++ACGS H +AV V+++G G NG+
Sbjct: 535 EGDFGRLGHSDSHSRNVPTLVK---DISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGK 591
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGC 435
LGHGDT+ P ++EAL ++ + G+ + A+ V C GC
Sbjct: 592 LGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 644
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 100/231 (43%), Gaps = 48/231 (20%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+VF WG+G G LG G + PK +E +V +ACG +H+A+V
Sbjct: 3964 GEVFSWGDG-DYGKLGHGNSE---------RQRRPKQIEGLQGEEVVQLACGFKHSAVVT 4013
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVL-----------------------------HPKLID 123
G++F++G GRLG S+ + P++I
Sbjct: 4014 ADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIP 4073
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
AL + IE +A G H A++ +GD+Y WG LGH N V P V L+G
Sbjct: 4074 ALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKE--PILVTT-LQGK 4130
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGV-LGHGDRKSVSIPREVESLK 233
++ IS G H++ T+ L T G G+ LG S+P + +LK
Sbjct: 4131 NIRQISAGRCHSSAWTTPA-LSTRASGCSGIQLGLPQ----SVPPQYNALK 4176
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 182/368 (49%), Gaps = 28/368 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALV 91
GD+F WG T G LG G G++ + L P ++ ++Q IACG + ++
Sbjct: 31 GDMFCWG-NTRHGELGLG--------GIEDEIILVPCQVDFKKASEIQQIACGENYTVVI 81
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
G+++S G G+LGH L +LI L + VACG YHT AV G L++
Sbjct: 82 THDGKIYSCGNNDYGQLGHERGRKRL--QLILGLDAFVFKKVACGAYHTIAVNEWGQLFS 139
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG + G LG ++ R+ L + ++CG H +T+ G+L+++G +
Sbjct: 140 WGSNSE--GQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNS 197
Query: 212 FGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG G D +S P+ + +L G+ ACG +H+ A+ SG +F
Sbjct: 198 EGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAI------------SKSGAIFG 245
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG D + + +P + L C ACG +V LT G V+T G+ +YGQ
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ T
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTR 365
Query: 390 DRNSPSLV 397
+P +V
Sbjct: 366 SIPTPQVV 373
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 163/331 (49%), Gaps = 23/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
K+G++F WG G LG G D +L P +D I+ +ACGE +T +T G +Y
Sbjct: 29 KKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIY 88
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+ G+ Y G LGH E + + G L+ ++CG +HT V GQLF++G
Sbjct: 89 SCGNNDY--GQLGH--ERGRKRLQLILG-LDAFVFKKVACGAYHTIAVNEWGQLFSWGSN 143
Query: 211 TFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+ G LG + + PR V++L V+ ACG+ H A+ ++G+L+
Sbjct: 144 SEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALT------------NNGELY 191
Query: 270 TWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+WG +G+LG G D +++ P + L +ACG ++A++ SG ++ G +
Sbjct: 192 SWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTF 251
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG N + LP++++ L + + ACG LT V+T G G G+LGHG
Sbjct: 252 GQLGLNDTQNRNLPHQLQ-TLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGS 310
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++ P V L V I+CG T A+
Sbjct: 311 NNNEILPRQVMELMGSTVTQISCGKRHTLAL 341
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI VACGE
Sbjct: 45 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGE 102
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G+E VP+ + L I + ++CG +H+
Sbjct: 103 AHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSL 159
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G H+ +
Sbjct: 160 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 215
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 216 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 267
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V ++ACG H A + S +Y+
Sbjct: 268 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 327
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 328 FGLGGNGQLGTGSTSNRKSPFTVK 351
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 10 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 68
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 69 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 124
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 125 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 172
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 173 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 232
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 233 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 291
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V +ACG T+A
Sbjct: 292 INPRKVFELMGSIVTQVACGRQHTSAF 318
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 56 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 108
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 109 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 168
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 169 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 226
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 227 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 274
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ +VACG T A +SG +Y+ G G
Sbjct: 275 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNG 334
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 335 QLGTGSTSNRKSPFTVKG 352
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 112 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 162
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 163 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 222
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 223 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 279
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 280 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 328
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 329 GLGGNGQLGTGSTSNRKSPFTV 350
>gi|147803323|emb|CAN75476.1| hypothetical protein VITISV_017798 [Vitis vinifera]
Length = 230
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 85/97 (87%)
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ LRT +ACGVWHT AVV +MVGN SSSNCSSGK FTWGD DKGR GHGDKEAKLVPT
Sbjct: 45 ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPT 104
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
CVAA ++PNFCR+ACGHSLTVALTTSG+VYT+G P++
Sbjct: 105 CVAAPIDPNFCRIACGHSLTVALTTSGYVYTIGRPMH 141
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 125 LSNMNIELVACGEYHTCAVT------------LSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
+SN+ + ACG +HT AV SG +TWGD + G GHG++ + V
Sbjct: 45 ISNLRTGISACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDS--DKGRFGHGDKEAKLV 102
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
P V P++ + I+CG T +T++G ++T G
Sbjct: 103 PTCVAAPIDP-NFCRIACGHSLTVALTTSGYVYTIG 137
Score = 46.6 bits (109), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+ F+WG+ GR GHG L P + A + N +ACG T A+T SG +YT G
Sbjct: 79 GKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPNFCRIACGHSLTVALTTSGYVYTIGR 138
Query: 155 GTYNFG 160
++ G
Sbjct: 139 PMHHKG 144
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 357 ACGSYH-VAVL-----------TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
ACG +H VAV+ S + +TWG GR GHGD + + P+ V A D
Sbjct: 54 ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 113
Query: 405 VKSIACGTNFTAAICLHKWVSGVDQSM 431
IACG + T A+ +V + + M
Sbjct: 114 FCRIACGHSLTVALTTSGYVYTIGRPM 140
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 12/74 (16%)
Query: 189 SCGPWHTAVVT------------SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
+CG WHT V S+G+ FT+GD G GHGD+++ +P V +
Sbjct: 54 ACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDPN 113
Query: 237 TVRAACGVWHTAAV 250
R ACG T A+
Sbjct: 114 FCRIACGHSLTVAL 127
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 113/359 (31%), Positives = 174/359 (48%), Gaps = 24/359 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVTVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
HT A+ G +Y WG DG GL G E VP+ + L I + ++CG +H
Sbjct: 94 AHTLALNDKGQVYAWGFAVDG--QLGL--SGTEEYTRVPRNIKS-LSDIQIVQVACGYFH 148
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+ ++ ++F++G +G LG G + K + P+ ++SL G+ + A G H+ +
Sbjct: 149 SLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLT-- 206
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SG +F WG G+LG D+ + VP + +L ++CG T A
Sbjct: 207 ----------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EV 372
LT G V+T G+ YGQLG+ ++ R +L + V +IACG H + T +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
Y++G G NG+LG G T +R SP V+ I ++ C+ + SG DQS
Sbjct: 317 YSFGLGGNGQLGMGTTSNRKSPFPVKGNWLPYNGQIPLNSDGEDYYCVKRIFSGGDQSF 375
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 165/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V G L+ ++ ++SCG HT + GQ++ +G G
Sbjct: 60 -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + K P + +L+ F ++A G + + LT SG V+ G +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I+CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGNIVTQIACGRQHTSAFV 310
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 24/251 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG DG LG G + + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGFAV-DGQLGLS--------GTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P++I +L + +A G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + ISCG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V S+G+++++
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319
Query: 272 GDGDKGRLGHG 282
G G G+LG G
Sbjct: 320 GLGGNGQLGMG 330
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 16/193 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF WG+ G LG G + K +S P+ ++S + + IA GG H+ ++
Sbjct: 157 EVFSWGQNKY-GQLGLG-------YEYKKQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTL 207
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G VF WG G+LG ++D P L+ +L + I ++CGE HT A+T G ++T+G
Sbjct: 208 SGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFG 267
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTF 212
G Y G LGH N +H + R L G V+ I+CG HT A V S G++++FG G
Sbjct: 268 AGGY--GQLGH-NSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN 324
Query: 213 GVLGHG---DRKS 222
G LG G +RKS
Sbjct: 325 GQLGMGTTSNRKS 337
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 20/335 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GL G+E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G + + + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G E ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G++ P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G + VP+ + L I + I+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR--VPRNIKS-LTDIQIVQIACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G G LG G + K S P+ ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G T G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG ++ G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+++ I +ACG YH+ A++ ++++WG + G LG G E+ ++ L GI
Sbjct: 133 SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH--GQLGLGFELKRQSSPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
+ ++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG G + +P+ ++S + + IACG H+ ++
Sbjct: 103 GQVYAWGLDT-DGQLG--------LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRFVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G + VP+ + L I + I+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR--VPRNIKS-LTDIQIVQIACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G G LG G + K S P+ ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G T G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG ++ G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+++ I +ACG YH+ A++ ++++WG + G LG G E+ ++ L GI
Sbjct: 133 SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH--GQLGLGFELKRQSSPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
+ ++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG G + +P+ ++S + + IACG H+ ++
Sbjct: 103 GQVYAWGLDT-DGQLG--------LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRFVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVK 342
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEYPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG G + P+ + S + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLGLGKEYPSQ--------ASPQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 172/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG T G LG G E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLATD--GQLGLPGTEECVRVPRNIRS-LSEIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G +G LG G + K + P+ ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + VPT + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +I CG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ T+ C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGTTSNRKSPFTVKGSWIPFSPQCPMSTDSEECYCVKRIFSGGDQSF 375
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 160/327 (48%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E + P+ V G L+ ++ ++SCG HT + GQ++ +G T G
Sbjct: 60 -CNDLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + V +PR + SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + K P + +L+ F ++A G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N D +P ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDDNDRYVPTLLKSLRSQKVVH-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V I CG T A
Sbjct: 283 INPRKVFELMGSVVTQITCGRQHTTAF 309
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 125/262 (47%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG L C V P+ + S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLAT-DGQLG--LPGTEECVRV------PRNIRSLSEIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P++I +L + +A G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG ++ +VP + L V I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDDNDRYVPTLLKS-LRSQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + CG HT A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 196/388 (50%), Gaps = 34/388 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V+ +ACGG H+ + + GEV++ G + G+LGH +S+ P+ I AL+ +I VACG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPEPIGALAGQHIVHVACG 92
Query: 137 EYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
E H+ A++ G +++WG G+ GL + V+ VP+ + L + ISCG WH
Sbjct: 93 ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVT--VPRLIK-KLNQQTILQISCGNWHC 149
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + GQ FT+G ++G LG G S + P+ V+SL G+ + A G H+ A+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG G+LG D+ + P V L ++CG T L
Sbjct: 206 --------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
T SG V+T G+ GQLG+ + ++ R +L S V +IACG +H +A + S +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVE---ALKDKQV--KSIACGTNFTAAICLHKWVSGVD 428
+G G G+LG G T + PS V+ A + Q+ K AC + I SG D
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHI-----FSGGD 372
Query: 429 QS--MCSGCR--LPFNNFKRKRHNCYNC 452
Q+ +CS LP ++F+ Y C
Sbjct: 373 QTFVLCSKYENSLPADDFRTINGTRYTC 400
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 169/327 (51%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVL--HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G G + V+ P++ + + N++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH +E S P+ + G L G H+ ++CG H+ ++ GQ+F++G G+ G
Sbjct: 61 NTK--GQLGHESEGSK--PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +V++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ S+ V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDERDRESPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG + T A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + S P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHESEGSKPEPIGALAGQHIVHVACGESHSVALSDQ 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+VFSWG S G+LG D V P+LI L+ I ++CG +H A+ G +TWG
Sbjct: 103 GQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+Y G LG G E S P+RV L+GI ++ ++ G H+ ++ +G +F +G +
Sbjct: 163 QNSY--GQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG G C + P+ ++S + + +A GG H+ ++
Sbjct: 156 GQFFTWGQNSY-GQLGLG----KEC----PSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ S G+LG + D P + L + + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G VS I+CG HT A V S+G ++ FG GT
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 161/324 (49%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G + VP+ + L I + I+CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR--VPRNIKS-LTDIQIVQIACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G G LG G + K S P+ ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N ++ V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G T G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAFV 310
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 148/285 (51%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLID 123
K E V LD QNI +CG H +N +G+V++WG ++ G+LG G + + P+ I
Sbjct: 73 KKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+++ I +ACG YH+ A++ ++++WG + G LG G E+ ++ L GI
Sbjct: 133 SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH--GQLGLGFELKRQSSPQLIKSLLGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
+ ++ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG
Sbjct: 191 PFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
+ACG T A +SG +Y+ G GQLG ++ K P V+G
Sbjct: 299 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG G + +P+ ++S + + IACG H+ ++
Sbjct: 103 GQVYAWGLDT-DGQLG--------LPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRFVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 163/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI VACGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL G+E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D + + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V + ACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG G T +R SP V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ +++CG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V ACG T+A
Sbjct: 283 INPRKVFELMGSIVTQAACGRQHTSAF 309
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI ACG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVACGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ + ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G+D P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G +AACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQAACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H A++ G L++WG G+ GL+ + V+ VP RV L + +SCG WH+
Sbjct: 94 SHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVA--VP-RVIQKLNQQTILQVSCGNWHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +V++PR ++ L ++ +CG WH+ A+ + G+ FTWG
Sbjct: 116 LGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHNLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P++I L+ I V+CG +H+ A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 183/360 (50%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G S G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NSK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGHG +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNSKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGHG ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG G+ DG LG + ++P+ ++ + ++CG H +
Sbjct: 103 GQLFSWGAGS-DGQLG--------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
G+ F+WG+ S G+LG G + P+ + +L + + VA G H+ A++LSG ++
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG N G LG +E P V L V ISCG HTAV+T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHG PR V L G + ACG HT A V SSG ++ +
Sbjct: 271 CGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319
Query: 272 GDGDKGRLGHG 282
G G +G+LG G
Sbjct: 320 GCGARGQLGTG 330
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
++E+ACG H L EVYT G + G+LGH + N P + AL D+ + +ACG
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93
Query: 413 NFTAAIC----LHKWVSGVD 428
+ + A+ L W +G D
Sbjct: 94 SHSLALSDRGQLFSWGAGSD 113
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 20/335 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GL G+E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G + + + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G E ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G++ P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 118/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ K+ S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI---LQPKLAPSFS---------DAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +++ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 150/303 (49%), Gaps = 34/303 (11%)
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
V+ + ++Y WG + + L G + PK + +I G + T V+++ G
Sbjct: 368 VSETCEVYVWGSNSSH--QLVEGTQEKILQPKLAPSFSDA---QTIEAGQYCTFVISTDG 422
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV-WHTAAVVEVMVGNSS 259
+ G G++G LG GD + S +++ E + ++ V ++ G HT A
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT-------- 474
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSG 318
+ G++F+WGDGD G+LGHG+ + P + ++ V+ G+ + A+T G
Sbjct: 475 ----TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDG 530
Query: 319 HVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSK-TEVYTWG 376
+YT G +G+LG+ ++ + +P V+ S V E++CGS H L+ V+++G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFG 587
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMC 432
G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+ ++ W G C
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA----C 643
Query: 433 SGC 435
GC
Sbjct: 644 LGC 646
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 37/304 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R V + G H A+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL-- 680
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLT 311
S N +++ WG+ G+ G G+ + P V+ L +++ G S +
Sbjct: 681 ------SHDN----EVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHS 730
Query: 312 VALT 315
+A T
Sbjct: 731 LAWT 734
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
V+ G+ H A++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DVSIGDSHCLALSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYCHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYCHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG H+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 168/335 (50%), Gaps = 20/335 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + V V+++ CG RH V G V++ G G+LGH + P+ + AL
Sbjct: 25 PRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
NI V+CGE HT A+ G +Y WG D GL G+E VP+ + L I +
Sbjct: 83 AQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL--QGSEECIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG +H+ ++ A ++F +G +G LG G + + + P+ ++SL G+ ++ A G
Sbjct: 140 VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D+ + VP + +L +
Sbjct: 200 AHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV- 363
CG T ALT G V+T G+ YGQLG+ ++ R +L S V +IACG H
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + +PR ++SL ++ V+ ACG +H+ A+ + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL------------SKASEVFCWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + + P + +L+ F +VA G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 159/318 (50%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG YH+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G E ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG--LQGSEECIRV------PRNIKSLSDIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G++ P+LI +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 172
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 173 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 229
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 230 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 284
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 285 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 397
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 398 FGCGARGQLGTGHTCNVKCPSPVK 421
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 80 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 139
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 140 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 194
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 195 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 242
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 243 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 302
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 303 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 361
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 362 VNPRRVLELMGSEVTQIACGRQHTLAF 388
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 126 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 181
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 182 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 241
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 242 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 298
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 299 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 346
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 347 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 406
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 407 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 461
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 235 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 285
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 346 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 402
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 403 RGQLGTGHTCNVKCPSPVK 421
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A++ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAL 309
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+AL +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A+V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFV-----EEIACGSYHVAVLTSKTEVYTWGKGANGR 382
Y LG P L V FV +E+ACG H L EVYT G G+
Sbjct: 6 YWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQ 65
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 66 LGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 490 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 547
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 548 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQK-LNQQTILQVSCGNWHCL 604
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 605 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 659
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 660 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 712
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 713 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 772
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 773 FGCGARGQLGTGHTCNVKCPSPVK 796
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +++ +++ VACG H+ + G++YT G
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGL 514
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 515 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 569
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 570 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 617
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 618 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 677
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 678 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 736
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 737 VNPRRVLELMGSEVTQIACGRQHTLAF 763
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 501 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 556
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 557 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 616
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 617 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 673
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 674 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 721
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 722 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 781
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 782 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRCKYHIVKQIFSGGDQTFVLCSKYE 836
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 610 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 660
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 661 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 720
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 721 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 777
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 778 RGQLGTGHTCNVKCPSPVK 796
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYCHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYCHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG H+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A++ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAL 309
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+AL +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A+V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFV-----EEIACGSYHVAVLTSKTEVYTWGKGANGR 382
Y LG P L V FV +E+ACG H L EVYT G G+
Sbjct: 6 YWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQ 65
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 66 LGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A++ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAL 309
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+AL +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A+V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFV-----EEIACGSYHVAVLTSKTEVYTWGKGANGR 382
Y LG P L V FV +E+ACG H L EVYT G G+
Sbjct: 6 YWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQ 65
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 66 LGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A++ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAL 309
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+AL +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A+V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFV-----EEIACGSYHVAVLTSKTEVYTWGKGANGR 382
Y LG P L V FV +E+ACG H L EVYT G G+
Sbjct: 6 YWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQ 65
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 66 LGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A++ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAL 309
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+AL +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A+V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRV-LELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFV-----EEIACGSYHVAVLTSKTEVYTWGKGANGR 382
Y LG P L V FV +E+ACG H L EVYT G G+
Sbjct: 6 YWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQ 65
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 66 LGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 173/357 (48%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG D GL+G +E VP+ + L I + ++CG H+
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPRNIKS-LSDIQIVQVACGYCHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ A ++F +G +G LG G D K + P+ ++SL G+ ++ A G H+ +
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D+ + VP + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +IACG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G++G + + +PR ++SL ++ V+ ACG H+ A+ + ++F W
Sbjct: 116 LGLVG--SEECIRVPRNIKSLSDIQIVQVACGYCHSLAL------------SKASEVFCW 161
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + + P + +L+ F +VA G + + LT SG ++ G +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +PN ++ S+ V I CG H A LT + V+T+G G G+LGH T
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVY-ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 280
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T+A
Sbjct: 281 HEINPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 158/318 (49%), Gaps = 27/318 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E V LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKKP---EQVVALDAQNIVAVSCGEAHTLAL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG +S G+LG G + + P+ I +LS++ I VACG H+ A++ + +++
Sbjct: 100 NDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + ++ L GI ++ G H+ V+T +G +F +G
Sbjct: 160 CWGQNKY--GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A +SG +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNG 325
Query: 330 QLGN-PQADGKLPNRVEG 346
QLG ++ K P V+G
Sbjct: 326 QLGTGSTSNRKSPFTVKG 343
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG VGS +++ P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLDS-DGQLG----LVGSEECIRV----PRNIKSLSDIQIVQVACGYCHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVF WG+ G+LG G D P+L+ +L + VA G H+ +TLSG ++
Sbjct: 154 KASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTV 341
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 184/360 (51%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 IKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A++ S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA---------------LKDKQVKSIACGTNFTAAIC 419
+G GA G+LG G T + PS V+ K + VK I G + T +C
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +I+ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAL 309
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+AL +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A+V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFV-----EEIACGSYHVAVLTSKTEVYTWGKGANGR 382
Y LG P L V FV +E+ACG H L EVYT G G+
Sbjct: 6 YWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQ 65
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
LGH + N P + AL D+ + +ACG + + A+ L W +G D
Sbjct: 66 LGH--EREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSD 113
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 180/384 (46%), Gaps = 22/384 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + +V+++ CG RH V G V++ G G+LGH D P+ + AL
Sbjct: 25 PRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRRKPEQVGALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I V+CGE HT A+ G +++WG Y L E VP+ + L + +
Sbjct: 83 AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKS-LSDVQIV 140
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVW 245
++CG H+ ++ +F++G +G LG G + K PR ++SL G+ A G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+ A+ SG +F WG G+LG D+ + VP + +L +
Sbjct: 201 HSFALT------------ISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHIC 248
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VA 364
CG T ALT G V+T G+ YGQLG+ + ++ R +L S V +IACG H +A
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLA 308
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+ S +Y++G G NG+LG G T +R SP V+ + CL +
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEANGCYCLKRIY 368
Query: 425 SGVDQSMCSGCRL----PFNNFKR 444
SG DQS + P ++F+R
Sbjct: 369 SGGDQSFAHYITIQNCHPPDDFRR 392
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG + GL+ V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVFSWGHAVYGQI---GLSTAEEYIRV------PRNIKSLSDVQIVQVACGHHHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K ++FSWG+ G+LG G++ P+ I +LS + +A G H+ A+T+SG ++
Sbjct: 154 KDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLTDETDRNVPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT A V SSG+++++
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHG 282
G G G+LG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+ WG+ G+LG G D+E L P + N V CG TV + G VYT G
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG+ ++ K P +V G L + ++CG H L K +V++WG G++G
Sbjct: 61 NDLGQLGHDKSRRK-PEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118
Query: 386 GDTDDR-NSPSLVEALKDKQVKSIACGTNFTAAI 418
++ P +++L D Q+ +ACG + + A+
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLAL 152
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 45 GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
+ G G N+ G + D ++P L+S + +I CG H A + K+G VF++G
Sbjct: 210 AIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAG 269
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDGTYNFGLL 162
G+LGH + ++P+ + L + +ACG HT A V SG +Y++G G G L
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG--GNGQL 327
Query: 163 GHGNEVSHWVPKRVNG 178
G G+ ++ P V G
Sbjct: 328 GTGSTINRKSPFTVKG 343
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/297 (33%), Positives = 153/297 (51%), Gaps = 27/297 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACG H + ++ G++FS+G G+LGH + L PK I+++ M I+ +ACG
Sbjct: 92 VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGT 151
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YH+ ++ GD+Y WG+ N G LG G EV + +PK++ E V S+SCG +HTA+
Sbjct: 152 YHSIILSEDGDVYVWGNN--NEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGYYHTAL 206
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRK--SVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVM 254
VT G L+TFG+ G LG + + ++P+ V + +CG HT A+ +
Sbjct: 207 VTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITK-- 264
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVA 313
G + WGDG +G+LGHG K ++ P + L V+CG S T
Sbjct: 265 ----------QGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAV 314
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAVL 366
+T SG V+T G +G+LG Q + N + F V ++CG H VL
Sbjct: 315 VTESGKVFTFGDGRHGKLG--QGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVL 369
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 175/352 (49%), Gaps = 25/352 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +ACG H+A+V + G ++ +G G+LG G + P + L + VACG
Sbjct: 40 VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGR 99
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT + SG L+++ G G LGH ++ + +PK + + + + I+CG +H+ +
Sbjct: 100 NHTIVYSESGKLFSF--GCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSII 156
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
++ G ++ +G+ G LG G+ S+P++++ K V +CG +HTA V
Sbjct: 157 LSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKK--EVVSVSCGYYHTALVTR----- 209
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPN-FCRVACGHSLTVAL 314
G L+T+G+ + G+LG + VP VA + + + V+CG TVA+
Sbjct: 210 -------DGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAI 262
Query: 315 TTSGHVYTMGSPVYGQLGN--PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
T GH Y G GQLG+ + P +++ KLS ++CG H AV+T +V
Sbjct: 263 TKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIK-KLSGQKCISVSCGESHTAVVTESGKV 321
Query: 373 YTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACGTNFTAAICLHK 422
+T+G G +G+LG G+ NS P + V ++CG T + +HK
Sbjct: 322 FTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHK 373
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 154/298 (51%), Gaps = 21/298 (7%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ N + +ACG+ H+ VT SG LY +G + ++G LG G+ S P V PL+
Sbjct: 35 IKNDGVVEMACGDEHSAVVTESGRLYVFG--SNDWGQLGLGHTKSLNKPSFV-KPLKPEK 91
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V ++CG HT V + +G+LF+FG G LGH D+++ +P+E+ES+ + + ACG
Sbjct: 92 VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGT 151
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
+H+ + E G ++ WG+ ++G+LG G++ +P + E V
Sbjct: 152 YHSIILSE------------DGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKE--VVSV 197
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+CG+ T +T G +YT G G+LG + ++ +P V ++CG+
Sbjct: 198 SCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGAR 257
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H +T + Y WG G+ G+LGHG + N P ++ L ++ S++CG + TA +
Sbjct: 258 HTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVV 315
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 141/261 (54%), Gaps = 23/261 (8%)
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
K + LPK +ES ++++ IACG H+ ++++ G+V+ WG + G+LG G + + PK
Sbjct: 127 KENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPK 186
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG-HGNEVSH-WVPKRVNG 178
+ + V+CG YHT VT G LYT+G+ G LG +++S+ VP+ V
Sbjct: 187 KLKF--KKEVVSVSCGYYHTALVTRDGFLYTFGENE--LGKLGLSSSQLSNTTVPQSVAM 242
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRT 237
P + S+SCG HT +T G + +GDG+ G LGHG + V+ P++++ L G +
Sbjct: 243 PADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKC 302
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAA 295
+ +CG HTA V E SGK+FT+GDG G+LG G+ P ++
Sbjct: 303 ISVSCGESHTAVVTE------------SGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSR 350
Query: 296 LVEPNFCRVACG--HSLTVAL 314
N V+CG H+L +A+
Sbjct: 351 FNYFNVVYVSCGGCHTLVLAV 371
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 111/223 (49%), Gaps = 28/223 (12%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G +FTFG F + +I + +K V ACG H+A V E
Sbjct: 11 IPDLGAVFTFGKSKF---------ADNIANKF-WIKNDGVVEMACGDEHSAVVTE----- 55
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
SG+L+ +G D G+LG G ++ P+ V L +VACG + T+ + S
Sbjct: 56 -------SGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSES 108
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G +++ G GQLG+ + +L P +E + + +++IACG+YH +L+ +VY WG
Sbjct: 109 GKLFSFGCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSIILSEDGDVYVWG 167
Query: 377 KGANGRLGHGDTDDRNSPSLVEALK-DKQVKSIACGTNFTAAI 418
G+LG G+ + SL + LK K+V S++CG TA +
Sbjct: 168 NNNEGQLGLGEEVEN---SLPKKLKFKKEVVSVSCGYYHTALV 207
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G + WG+G+ G LG G ++ + PK ++ +++CG H A+V
Sbjct: 266 GHCYAWGDGS-QGQLGHGTKL--------LEVNEPKQIKKLSGQKCISVSCGESHTAVVT 316
Query: 93 KQGEVFSWGEESGGRLGHGVDS--DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G+VF++G+ G+LG G DS + P + + N+ V+CG HT + + +
Sbjct: 317 ESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKD 376
Query: 151 TWGDG 155
+ DG
Sbjct: 377 DFVDG 381
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 170/346 (49%), Gaps = 30/346 (8%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G + +V + EV+ WG S +L G +L PKL A +N + + G+Y T V
Sbjct: 367 GENGNMVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANA--QTIEAGQYCTFVVY 424
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI--HVSSISCGPWHTAVVTSAG 202
G + G G+Y G LG G+ + K++N + +SS HT +T+ G
Sbjct: 425 SDGTVRACGKGSY--GRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADG 482
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++F++GDG +G LGHG+ + P++++ +L+G + G H+AAV E
Sbjct: 483 EVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE--------- 533
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKL---------VPTCVAALVEPNFCRVACGHSLTV 312
G+LFTWG+GD GRLGHGD KL P + ALV +V CG ++
Sbjct: 534 ---DGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSL 590
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
ALT++G ++ G G+P++ P VE +L+ + + ++ACG H LT EV
Sbjct: 591 ALTSTGQLFAWGCGACLGCGSPESTALRPKLVE-ELANTRIVDVACGDSHCLALTHDNEV 649
Query: 373 YTWGKGANGRLGHGDTDDR-NSPSLVEALKDKQVKSIACGTNFTAA 417
Y WG A G+ G G + P V L V I+ GT+ + A
Sbjct: 650 YAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLA 695
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + + G ++ + L A +A Q I G +V
Sbjct: 378 EVYVWGSNSSHQLAEGSQEKI-------LQPKLSPAFANA-----QTIEAGQYCTFVVYS 425
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K ++ I ++ + HT A+T G+++
Sbjct: 426 DGTVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADGEVF 485
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK++ G L+G V SIS G H+A VT G+LFT+G+G
Sbjct: 486 SWGDGDY--GKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEG 543
Query: 211 TFGVLGHGD--RK-------SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
+G LGHGD RK V P+ +E+L GL + CG SS +
Sbjct: 544 DYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCG------------SQSSLA 591
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAK-LVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
S+G+LF WG G LG G E+ L P V L VACG S +ALT V
Sbjct: 592 LTSTGQLFAWGCG--ACLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEV 649
Query: 321 YTMGSPVYGQLGNPQADGKL--PNRVEGKLSKSFVEEIACGSYHV---AVLTSKTEVYTW 375
Y G+ GQ G + + P +V G L V +I+ G+ H L + +V W
Sbjct: 650 YAWGNNAMGQCGQGHSQSPITKPKKVVG-LDGVTVHQISAGTSHSLAWTALPTDRQVVAW 708
Query: 376 GK 377
+
Sbjct: 709 HR 710
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 35/291 (12%)
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
VT + ++Y WG + + L G++ PK + +I G + T VV S G
Sbjct: 373 VTENSEVYVWGSNSSH--QLAEGSQEKILQPKLSPA---FANAQTIEAGQYCTFVVYSDG 427
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV-WHTAAVVEVMVGNSS 259
+ G G++G LG GD + + +++ + +R + ++ G HT A+
Sbjct: 428 TVRACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALT-------- 479
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSG 318
+ G++F+WGDGD G+LGHG+ + P + ++ + ++ G+ + A+T G
Sbjct: 480 ----ADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDG 535
Query: 319 HVYTMGSPVYGQLGNPQADGKL----------PNRVEGKLSKSFVEEIACGSYHVAVLTS 368
++T G YG+LG+ ++ KL P +E L ++ ++ CGS LTS
Sbjct: 536 ELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEA-LVGLYIRKVCCGSQSSLALTS 594
Query: 369 KTEVYTWGKGANGRLGHGDTDDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
+++ WG GA LG G + P LVE L + ++ +ACG + A+
Sbjct: 595 TGQLFAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLAL 643
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 51/275 (18%)
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+VT +++ +G + L G ++ + P+ + +T+ A G + T V
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAFANAQTIEA--GQYCTFVVY----- 424
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF-----------CRVA 305
S G + G G GRLG GD + L + NF + +
Sbjct: 425 -------SDGTVRACGKGSYGRLGLGDSNNQ------TTLKKLNFDHRYVIRKISSSKGS 471
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVA 364
GH T+ALT G V++ G YG+LG+ + K P +++G L V+ I+ G H A
Sbjct: 472 DGH--TLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSA 529
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTD------DRN---SPSLVEALKDKQVKSIACGTNFT 415
+T E++TWG+G GRLGHGD++ D N P ++EAL ++ + CG+ +
Sbjct: 530 AVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSS 589
Query: 416 AAIC----LHKWVSGVDQSMCSGCRLPFNNFKRKR 446
A+ L W G C GC P + R +
Sbjct: 590 LALTSTGQLFAWGCGA----CLGCGSPESTALRPK 620
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 180/384 (46%), Gaps = 22/384 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + +V+++ CG RH V G V++ G G+LGH D P+ + AL
Sbjct: 25 PRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRRKPEQVGALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I V+CGE HT A+ G +++WG Y L E VP+ + L + +
Sbjct: 83 AQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLSTAEEYIR-VPRNIKS-LSDVQIV 140
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVW 245
++CG H+ ++ +F++G +G LG G + K PR ++SL G+ A G
Sbjct: 141 QVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGG 200
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+ A+ SG +F WG G+LG D+ + VP + +L +
Sbjct: 201 HSFALT------------ISGAIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHIC 248
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VA 364
CG T ALT G V+T G+ YGQLG+ + ++ R +L S V +IACG H +A
Sbjct: 249 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLA 308
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+ S +Y++G G NG+LG G T +R SP V+ + CL +
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLPEANGCYCLKRIY 368
Query: 425 SGVDQSMCSGCRL----PFNNFKR 444
SG DQS + P ++F+R
Sbjct: 369 SGGDQSFAHYITIQNCHPPDDFRR 392
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 24/251 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG + GL+ V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVFSWGHAVYGQI---GLSTAEEYIRV------PRNIKSLSDVQIVQVACGHHHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K ++FSWG+ G+LG G++ P+ I +LS + +A G H+ A+T+SG ++
Sbjct: 154 KDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E VP + L + I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLTDETDRNVPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT A V SSG+++++
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHG 282
G G G+LG G
Sbjct: 320 GLGGNGQLGTG 330
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+ WG+ G+LG G D+E L P + N V CG TV + G VYT G
Sbjct: 1 MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG+ ++ K P +V G L + ++CG H L K +V++WG G++G
Sbjct: 61 NDLGQLGHDKSRRK-PEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118
Query: 386 GDTDDR-NSPSLVEALKDKQVKSIACGTNFTAAI 418
++ P +++L D Q+ +ACG + + A+
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLAL 152
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 45 GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
+ G G N+ G + D ++P L+S + +I CG H A + K+G VF++G
Sbjct: 210 AIFGWGRNKFGQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAG 269
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDGTYNFGLL 162
G+LGH + ++P+ + L + +ACG HT A V SG +Y++G G G L
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLG--GNGQL 327
Query: 163 GHGNEVSHWVPKRVNG 178
G G+ ++ P V G
Sbjct: 328 GTGSTINRKSPFTVKG 343
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 171/358 (47%), Gaps = 37/358 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + K P+ V+G + V++I G VL SK E Y+
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARSDRFKYHIVKQIFSGGDQTFVLCSKYENYS 385
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 188/388 (48%), Gaps = 37/388 (9%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDG 155
V WG G+ G + P L+D L +++ I V+CG ++ A+T SGDL WG G
Sbjct: 10 VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LG GN VP RVN L+ +V ++C HTA + S G+L+T+G G L
Sbjct: 70 --GCGQLGFGNLEDCLVP-RVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNGKL 124
Query: 216 GHGD------RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GHG VS P +V++L+G + ++ +CG +HT + + K
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD------------DKKAL 172
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG G +GRLGHGD + P + +L ++CG T L +G +Y G +G
Sbjct: 173 TWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 330 QLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH--- 385
+LG D L P +EG L + +++ GS H A +T +VYTWG+G GRLGH
Sbjct: 233 KLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFN 290
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSGCRLPFNN 441
G D SP + L+ + I+CG + + A+ ++ W G+ +++ G + N
Sbjct: 291 GPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTW--GMTKNIGHGIQGIHPN 348
Query: 442 FKRKRHNCYNCGLVFCHSCSSKKSLKAS 469
K N +V CSS S+ S
Sbjct: 349 MPSKHPILQNKNIVQV-VCSSSHSIALS 375
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 171/345 (49%), Gaps = 40/345 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD+ +WG G G G LG FG D +P+ + + +V +AC RH A +
Sbjct: 61 GDLILWGYG-GCGQLG---------FGNLEDCLVPRV--NLSLKNVVQVACSDRHTAAIL 108
Query: 93 KQGEVFSWGEESGGRLGHG-----VDSDVL-HPKLIDALSNMNIELVACGEYHTCAVTLS 146
GE+++WG G+LGHG + ++V+ P + AL + V+CG YHT +T
Sbjct: 109 SNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD 168
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
TWG G G LGHG+ + PK + L G+ + ISCG HTA++ G+L+
Sbjct: 169 KKALTWGLGLQ--GRLGHGDTQDIFTPKLIE-SLAGLPIKEISCGGHHTAILLVTGKLYM 225
Query: 207 FGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
FG G FG LG G V IPR +E L+ ++ + + G H+AAV +
Sbjct: 226 FGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKC------------ 273
Query: 266 GKLFTWGDGDKGRLGH---GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
GK++TWG G GRLGH G + L P ++ L + ++CG+S +VAL+ G +YT
Sbjct: 274 GKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYT 331
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
G G +P++ +K+ V ++ C S H L+
Sbjct: 332 WGMTKNIGHGIQGIHPNMPSKHPILQNKNIV-QVVCSSSHSIALS 375
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 158/331 (47%), Gaps = 33/331 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG + +G LG G + V KALE V+ V +CG H +
Sbjct: 111 GELYTWG-CSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV---SCGSYHTGCLT 166
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ +WG GRLGHG D+ PKLI++L+ + I+ ++CG +HT + ++G LY +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G FG LG G+ +P+ + GPLE I ++ +S G H+A VT G+++T+G G
Sbjct: 227 GGGA--FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282
Query: 213 GVLGH---GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGH G P+ + +L+ V +CG H+ A+ +V G ++
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDV------------GDIY 330
Query: 270 TWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
TWG +GHG + +P+ L N +V C S ++AL+ G + +
Sbjct: 331 TWGMTK--NIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIGALVQKSPETW 388
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
PQ+ L E K + +EE G
Sbjct: 389 ----KPQS---LAEDQEPKKADQSIEEFKTG 412
>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
Length = 1270
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 174/352 (49%), Gaps = 17/352 (4%)
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHP 119
K+ +P+ ++ ++ ACG H L+ G+++S G G+LGH V+S P
Sbjct: 332 KVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRP 391
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+L+ AL N I CG H+ A+T G +Y+WG G LG + + + R+
Sbjct: 392 QLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNA--VGQLGQETDTTRQIIPRLIRS 449
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTV 238
+ V I+ G +H +T++G+L+ +G +G LG G + VS P V+SL G+
Sbjct: 450 IAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIA 509
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
ACG GN S + SG +F WG G+LG D ++ PT + L
Sbjct: 510 FIACG------------GNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRS 557
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
V+CG +V LT G V+T G+ +GQLG+ + ++ R+ +L S + +IAC
Sbjct: 558 LGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIAC 617
Query: 359 GSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
G H +A + S+ ++Y +G G+LG G + N+P +V Q+ + +
Sbjct: 618 GRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGPWQSQILTFS 669
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 160/348 (45%), Gaps = 35/348 (10%)
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
+ +D +N+ CG QGEVF S ++ V+ P+ +D + I
Sbjct: 310 MTVDGENVECGP-------IQGEVFP----SLAKVM------VMVPRKMDWMHAKEIARA 352
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
ACG HT +T G +Y+ G+ + G LGH E ++ LE ++ CG
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDH--GQLGHDVESLPNKRPQLLTALENYIITQACCGTA 410
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+ +T+ GQ++++G G LG D IPR + S+ + V+ A G +H A+
Sbjct: 411 HSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALT- 469
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLT 311
+SG+L+ WG G+LG G K+ PT V +L +ACG + +
Sbjct: 470 -----------NSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHS 518
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
A++ SG ++ G +GQLG N + P ++ L V ++CG LT+
Sbjct: 519 FAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLR-TLRSLGVRYVSCGDDFSVFLTAGG 577
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+T G G G+LGHG ++ P +V L ++ IACG T A
Sbjct: 578 GVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAF 625
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 16/211 (7%)
Query: 23 GSGHDDGDAL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
+GH AL G+++ WG G LG G+ S P ++S + +
Sbjct: 459 AAGHYHCLALTNSGELYAWG-SNAYGQLGLGMT--------NEKVSTPTLVQSLAGVPIA 509
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
IACGG H+ V+K G +F WG+ + G+LG + P + L ++ + V+CG+
Sbjct: 510 FIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDF 569
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVV 198
+ +T G ++T G GT FG LGHG+ + +P+ V L G ++ I+CG HT A V
Sbjct: 570 SVFLTAGGGVFTCGAGT--FGQLGHGSCNNEILPRMV-FELMGSKITQIACGRRHTLAFV 626
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
S G+++ FG G LG G + + P+ V
Sbjct: 627 PSRGKIYGFGLSGVGQLGIGIVGNYNTPQIV 657
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
+G GD G+LGHGD P + AL +V G ++ALT++G VY G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TD 389
G+ +A P +E +L+ + + +I+ G H L+ EVY WG + G+ G G+ T
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L ++ I+ GT+ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 134/261 (51%), Gaps = 33/261 (12%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAA 241
+I G + T V+++ G + G G++G LG GD + S +++ S+K + + + +
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DG--HTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKV 512
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACG 359
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CG
Sbjct: 513 VVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCG 569
Query: 360 SYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 570 SSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Query: 419 C----LHKWVSGVDQSMCSGC 435
++ W G C GC
Sbjct: 630 TSTGQVYAWGCGA----CLGC 646
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 39/305 (12%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGDY-GKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGE--V 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
+ +TS GQ++ +G G LG G ++ ++ P+ +E L R +V+
Sbjct: 625 SSLALTSTGQVYAWGCG--ACLGCGSSEATALRPKLIEELAATR-------------IVD 669
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSL 310
+ +G+S + S +++ WG+ G+ G G+ + P V+ L +++ G S
Sbjct: 670 ISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSH 729
Query: 311 TVALT 315
++A T
Sbjct: 730 SLAWT 734
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 15 SAVSSSSQGSGHDDGDALGDVFIWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALES 72
S V S GS H + +W G GD G LG G NRV PK +E+
Sbjct: 561 SNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYK----------PKVIEA 610
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ ++ + G + + + G+V++WG G LG G ++ L PKLI+ L+ I
Sbjct: 611 LQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEATALRPKLIEELAATRIV 668
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISC 190
++ G+ H +++ ++Y WG+ + G G GN PK+V+G L+GI + IS
Sbjct: 669 DISIGDSHCLSLSHDNEVYAWGNNS--MGQCGQGNSTGPITKPKKVSG-LDGIAIQQISA 725
Query: 191 GPWHTAVVTS 200
G H+ T+
Sbjct: 726 GTSHSLAWTA 735
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 170/355 (47%), Gaps = 30/355 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD------VLHPKLIDALSNMNIE 131
+ +ACG H+ + G V++WG G+LG + D +P+ + L I
Sbjct: 1215 IVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFIL 1274
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+ACG +H +T + +WG G FG LG + +S P+ V L+G I CG
Sbjct: 1275 SIACGRWHNMTLTSERQVLSWGAG--EFGQLGLDHNLSKGTPQMVKA-LDGRAPCKILCG 1331
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA-CGVWHTAAV 250
WH+A + +G++ +G +G LGHGD KS S PR + L+ VR A G HT
Sbjct: 1332 GWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLV- 1390
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTCVAALVEPNFCRVACGH 308
VMV N K+F G G+LG D + K VP + L N C+VA G
Sbjct: 1391 --VMVAN---------KVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGD 1439
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---PNRVEGKLSKSFVEEIACGSYHVAV 365
++AL+ G V++ G +GQLG+ KL P K+ V+ IACG A
Sbjct: 1440 QHSLALSVFGEVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPD-VKSIACGYTFSAA 1498
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+++K EV+TWG G +G LGH +PSL++ +V IACG A I
Sbjct: 1499 MSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDF--SEVVQIACGFKHMAGIVF 1551
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 175/342 (51%), Gaps = 29/342 (8%)
Query: 91 VNKQGE--VFSWGEESGGRLGHGVDSDVLHPKLIDAL-SNMNIELVACGEYHTCAVTLSG 147
V+ +GE +++WG GRLGHG + P+ I + SN I VACG H+ A + G
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG 1232
Query: 148 DLYTWGDGTYNFGLLGHGN-----EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+Y WG G + G LG ++++ + L+ + SI+CG WH +TS
Sbjct: 1233 GVYAWGAG--DRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSER 1290
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
Q+ ++G G FG LG S P+ V++L G + CG WH+AA++E
Sbjct: 1291 QVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE---------- 1340
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA-CGHSLTVALTTSGHVY 321
SGK+ WG G+LGHGD ++ P L R A G + T+ + + V+
Sbjct: 1341 --SGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTLVVMVANKVF 1398
Query: 322 TMGSPVYGQLG--NPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
MGS + GQLG +P GK +P +E +L+ + ++A G H L+ EV++WG
Sbjct: 1399 AMGSNIDGQLGLDDPSRTGKNVPVSIE-ELNGKNICQVAAGDQHSLALSVFGEVWSWGGS 1457
Query: 379 ANGRLGHGDTDDRNSPS-LVEALK-DKQVKSIACGTNFTAAI 418
G+LGH D+ +P+ L+E K VKSIACG F+AA+
Sbjct: 1458 PFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAM 1499
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 150/313 (47%), Gaps = 27/313 (8%)
Query: 95 GEVFSWGEESGGRLGHGVD-----SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
G ++++G+ GRLGHGV+ V HPK I+ L+ M++ +ACG+ T A+T +G +
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
YTWG LG G ++ VP+ V L V IS G H A T + F +G
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633
Query: 210 GTFGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
TFG LG S + P E+ SL+ ACG WHT + ++G +
Sbjct: 634 NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLI------------STNTGSV 681
Query: 269 FTWGDGDKGRLGHGDKEA-----KLVP---TCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+ G G G+LGHGD E+ K +P V + +V+ G + A+T G +
Sbjct: 682 MSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRL 741
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+T G QLG+ + + R +K V +++ G H+ L Y+WG G+
Sbjct: 742 FTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSA 801
Query: 381 GRLGHGDTDDRNS 393
G+LGHG+ +R +
Sbjct: 802 GQLGHGEMCERET 814
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 154/306 (50%), Gaps = 17/306 (5%)
Query: 33 GDVFIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
GD +I+ G G G LG G+ S VK PK +E+ + V IACG A +
Sbjct: 513 GDGYIYTYGKGVFGRLGHGVEYTRSEESVKH----PKRIETLAKMSVVFIACGKDSTAAL 568
Query: 92 NKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
G+V++WG+ + G+LG G ++ P+L+ LS+ + ++ G H T
Sbjct: 569 TDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF 628
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+ WG T FG LG + +S ++P L ++ SI+CG WHT + T+ G + + G
Sbjct: 629 FVWGSNT--FGQLGIPH-ISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCG 685
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GK 267
G G LGHGD +S++ ++L + + G + +V+V G SS+ ++ G+
Sbjct: 686 KGWHGQLGHGDYESLTALS--KTLPYFKKIVEGFG---DSFIVKVSAGKESSAAITNKGR 740
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
LFTWG GD+ +LGH + + P V + V+ G S +AL SG Y+ G+
Sbjct: 741 LFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGS 800
Query: 328 YGQLGN 333
GQLG+
Sbjct: 801 AGQLGH 806
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 49/363 (13%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
+NI G H VF WG+ G+LG+ + P ++ A N+ +++ A G+
Sbjct: 83 ENIELQGSH---------VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQ 133
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNE-------VSHWVPKRVNGPLEGI-----HVS 186
HT ++ G + + G Y G LG G+ VS ++ L+ I ++
Sbjct: 134 HTLFLSADGVVLSCGSNVY--GQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIV 191
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
I+ G +H+ + G++F++G G++G LG G + PR V SL+ + V ACG H
Sbjct: 192 GIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHH 251
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAA+ V G ++TWG G +G+LGH + + P A+L + ++ C
Sbjct: 252 TAAITTV------------GDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRC 299
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G T+ + SG +Y+MG+ +GQLG A D +P V G ++ ++ A G +A
Sbjct: 300 GDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIA- 358
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL-KDKQVKSIACGTNFTAAIC----L 420
LT+ +V+ +G L P V L K + ++A +F AI L
Sbjct: 359 LTNTGKVFAFGNETEPHL-------NRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQL 411
Query: 421 HKW 423
+W
Sbjct: 412 FRW 414
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 170/409 (41%), Gaps = 96/409 (23%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ IA G H+ +N G++FSWG S G+LG G D++ P+ + +L N + +ACG
Sbjct: 189 NIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACG 248
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+HT A+T GD++TWG G G LGH + + P R+N L I CG HT
Sbjct: 249 AHHTAAITTVGDVWTWGKGLR--GQLGHKSVKEEFSP-RLNASLRKCGAQKIRCGDDHTL 305
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL----------KGLRTV-------- 238
V+ +GQL++ G T G LG GD IP V KG R++
Sbjct: 306 VILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKV 365
Query: 239 ---------------RAACGVWHTAAVVEVM-VGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
R G+ + ++ V + + +G+LF W R
Sbjct: 366 FAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRW------RPFSS 419
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN 342
++E+ + A+ R+ CGH+ H+ + SP ++G QA
Sbjct: 420 EEESSRMLESFHAI--KGVVRMFCGHN---------HMAVICSP---EMGCTQA------ 459
Query: 343 RVEGKLSKSFVEEIACGSYH-------VAVLTSKTE---------------------VYT 374
+ S SF +I+ S + L + TE +YT
Sbjct: 460 MISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYT 519
Query: 375 WGKGANGRLGHGDTDDRNS-----PSLVEALKDKQVKSIACGTNFTAAI 418
+GKG GRLGHG R+ P +E L V IACG + TAA+
Sbjct: 520 YGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAAL 568
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 161/401 (40%), Gaps = 76/401 (18%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM-------- 128
DV++IACG +A ++ +GEVF+WG G LGH P LI S +
Sbjct: 1485 DVKSIACGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFK 1544
Query: 129 ------------NIELVACGEYHTCAVTLSGDL--------------------------- 149
IEL + T SG +
Sbjct: 1545 HMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSAS 1604
Query: 150 --------YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ WG+ T G LG + P + L + IS +A VT +
Sbjct: 1605 NQKRHGCVFVWGEDT--CGQLGIRGLQAARSPSLMQSLL-ATSIVHISANSDMSAFVTDS 1661
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
G L+ G G LG G P E+ SL ++ ++ ACG +H A+ E
Sbjct: 1662 GSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTE--------- 1712
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+++ WGDG G G + L P +++L + V G + AL+ G ++
Sbjct: 1713 ---EKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLF 1769
Query: 322 TMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT--EVYTWGK 377
G GQLG A P ++ V +++ G+ H AVL T ++T G
Sbjct: 1770 MWGKNSNGQLGLGTTSAAEDSPTKISNL--DGVVMDVSLGANHSAVLMQVTSPNLFTCGL 1827
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
ANG+LG GD DR++ + V+AL D+Q+ S +CG TAA+
Sbjct: 1828 NANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAV 1868
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 191/479 (39%), Gaps = 80/479 (16%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGD---VFIWGEGTGDGVLGGGLNRVGSCF 58
K ++D + + S + +G+ AL D +F WG G+ G LG
Sbjct: 173 KQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSW-GKLG---------I 222
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G ++ P+ + S V +IACG H A + G+V++WG+ G+LGH +
Sbjct: 223 GSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFS 282
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+L +L + + CG+ HT + SG LY+ G T+ G LG G+ +P V G
Sbjct: 283 PRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTH--GQLGLGDATDRIIPTLVTG 340
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP------------ 226
V I + +T+ G++F FG+ T L R +P
Sbjct: 341 -FANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRFVAGLPKSDLIIAVARTA 399
Query: 227 -------------------------REVESLKGLR-TVRAACGVWHTAAV-------VEV 253
R +ES ++ VR CG H A + +
Sbjct: 400 HFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQA 459
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
M+ + S++ SS D + L E L F V S +
Sbjct: 460 MISRNKSTSFSS-------DISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDS--PS 510
Query: 314 LTTSGHVYTMGSPVYGQLGN------PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
G++YT G V+G+LG+ + K P R+E L+K V IACG A LT
Sbjct: 511 REGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIE-TLAKMSVVFIACGKDSTAALT 569
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRN--SPSLVEALKDKQVKSIACGTNFTA-AICLHKW 423
+VYTWGK A G+LG G P LV+ L V I+ G N A + +HK+
Sbjct: 570 DTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKF 628
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 146/312 (46%), Gaps = 32/312 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P + S + + +ACG H + ++ V++WG+ G G +DVL P+ + +L+
Sbjct: 1686 PVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLA 1745
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHV 185
+I V G +H+ A++ GDL+ WG + G LG G + P +++ L+G+ V
Sbjct: 1746 ACSIIGVHAGGFHSAALSQYGDLFMWGKNSN--GQLGLGTTSAAEDSPTKISN-LDGV-V 1801
Query: 186 SSISCGPWHTAVV--TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
+S G H+AV+ ++ LFT G G LG GD S V++L + V A+CG
Sbjct: 1802 MDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCG 1861
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNF 301
HTAAV + G L TWG+G G+LG +K + P + A+
Sbjct: 1862 AAHTAAVSQY------------GDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPM 1909
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE------E 355
+V CG +T+ ++ G +Y G LG G R E +S VE +
Sbjct: 1910 VKVVCGQEVTIVVSEKGELYMAGYESTIGLG-----GNSSRRREFDVSFREVEGLIQPTQ 1964
Query: 356 IACGSYHVAVLT 367
IA GS HV L
Sbjct: 1965 IAVGSVHVLALV 1976
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 176/444 (39%), Gaps = 115/444 (25%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL--------------- 125
I CGG H+A + + G++ WG+ G+LGHG P++ L
Sbjct: 1328 ILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANH 1387
Query: 126 --------------SNMNIEL--------------------------VACGEYHTCAVTL 145
SN++ +L VA G+ H+ A+++
Sbjct: 1388 TLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSV 1447
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-----VSSISCGPWHTAVVTS 200
G++++WG FG LGH P PL H V SI+CG +A +++
Sbjct: 1448 FGEVWSWGGSP--FGQLGHETITDKLAPT----PLLERHKIPPDVKSIACGYTFSAAMSA 1501
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV--------- 251
G++FT+G+G G LGH + P ++ V+ ACG H A +V
Sbjct: 1502 KGEVFTWGNGESGELGHAPKVLTYAPSLIKDFS--EVVQIACGFKHMAGIVFKPRMKTIE 1559
Query: 252 ----------------EVMVGN--------------------SSSSNCSSGKLFTWGDGD 275
+ G+ S+S+ G +F WG+
Sbjct: 1560 LTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDT 1619
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+LG +A P+ + +L+ + ++ ++ +T SG +Y G +G+LG
Sbjct: 1620 CGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGH 1679
Query: 336 ADGKLPNRVEGK-LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
P VE + L+ + ++ACG+YH LT + VY WG G G G +T+D P
Sbjct: 1680 M-APAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEP 1738
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
+ +L + + G +AA+
Sbjct: 1739 QELSSLAACSIIGVHAGGFHSAAL 1762
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 172/391 (43%), Gaps = 30/391 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF+WGE T + GL S P ++S + + +I+ +A V
Sbjct: 1610 GCVFVWGEDTCGQLGIRGLQAARS----------PSLMQSLLATSIVHISANSDMSAFVT 1659
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++ G GRLG G + P I +L+ + I VACG YH A+T +Y W
Sbjct: 1660 DSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG + + + N+V P+ ++ L + + G +H+A ++ G LF +G +
Sbjct: 1720 GDGKWGNAGVSNTNDVLE--PQELSS-LAACSIIGVHAGGFHSAALSQYGDLFMWGKNSN 1776
Query: 213 GVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G + P ++ +L G+ + + G H+A +++V +S LFT
Sbjct: 1777 GQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQV----------TSPNLFTC 1825
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG GD + T V AL + +CG + T A++ G + T G+ GQL
Sbjct: 1826 GLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQL 1885
Query: 332 G---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G D + P ++ + V ++ CG V++ K E+Y G + LG +
Sbjct: 1886 GLKAGLSKDIENPVQLPAICNDPMV-KVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSS 1944
Query: 389 DDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
R S E Q IA G+ A+
Sbjct: 1945 RRREFDVSFREVEGLIQPTQIAVGSVHVLAL 1975
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 184/440 (41%), Gaps = 89/440 (20%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
+GDV+ WG+G G LG V F ++++SL K Q I CG H ++
Sbjct: 258 VGDVWTWGKGL-RGQLGH--KSVKEEFSPRLNASLRKC-------GAQKIRCGDDHTLVI 307
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G+++S G + G+LG G +D + P L+ +N + + + A+T +G ++
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFA 367
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
+G+ T H N + P+ V G + + +++ ++ GQLF + +
Sbjct: 368 FGNETEP-----HLNRI----PRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFS 418
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV-------VEVMVGNSSSSNCS 264
+ +S + ++KG+ VR CG H A + + M+ + S++ S
Sbjct: 419 ------SEEESSRMLESFHAIKGV--VRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFS 470
Query: 265 S-------------------------------------------GKLFTWGDGDKGRLGH 281
S G ++T+G G GRLGH
Sbjct: 471 SDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGH 530
Query: 282 G-----DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL----G 332
G +E+ P + L + + +ACG T ALT +G VYT G G+L G
Sbjct: 531 GVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSG 590
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
P A +P V+ LS V +I+ G H A T + + WG G+LG
Sbjct: 591 KPLAI-VVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYM 648
Query: 393 -SPSLVEALKDKQVKSIACG 411
P + +L++ ++SIACG
Sbjct: 649 PDPYEITSLREANIRSIACG 668
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 134/291 (46%), Gaps = 37/291 (12%)
Query: 147 GDLYTWGDGTYNFGLLGHGNE-------VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
G +YT+G G FG LGHG E V H PKR+ L + V I+CG TA +T
Sbjct: 515 GYIYTYGKGV--FGRLGHGVEYTRSEESVKH--PKRIE-TLAKMSVVFIACGKDSTAALT 569
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSI--PREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
G+++T+G G LG G K ++I P+ V+ L + + G H A ++
Sbjct: 570 DTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH--- 626
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTT 316
K F WG G+LG + + P + +L E N +ACG T+ T
Sbjct: 627 ---------KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTN 677
Query: 317 SGHVYTMGSPVYGQLGNPQADG------KLP---NRVEGKLSKSFVEEIACGSYHVAVLT 367
+G V + G +GQLG+ + LP VEG SF+ +++ G A +T
Sbjct: 678 TGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEG-FGDSFIVKVSAGKESSAAIT 736
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+K ++TWGKG +LGH + + P VE +V ++ G + A+
Sbjct: 737 NKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLAL 787
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/405 (27%), Positives = 169/405 (41%), Gaps = 43/405 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G + +WG+ G LG G + SC +++ L LE V+ G H +V
Sbjct: 1342 GKILLWGKNV-YGQLGHGDTK--SCSAPRVNQYL--RLEG----KVRTAGLGANHTLVVM 1392
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+VF+ G G+LG S P I+ L+ NI VA G+ H+ A+++ G+++
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVW 1452
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-----VSSISCGPWHTAVVTSAGQLF 205
+WG FG LGH P PL H V SI+CG +A +++ G++F
Sbjct: 1453 SWGGSP--FGQLGHETITDKLAPT----PLLERHKIPPDVKSIACGYTFSAAMSAKGEVF 1506
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV----EVMVGNSSSS 261
T+G+G G LGH + P ++ V+ ACG H A +V + + SS
Sbjct: 1507 TWGNGESGELGHAPKVLTYAPSLIKDFS--EVVQIACGFKHMAGIVFKPRMKTIELTGSS 1564
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
N GD G A V + + S + G V+
Sbjct: 1565 NI----------GDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQ-KRHGCVF 1613
Query: 322 TMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
G GQLG QA + P+ ++ L+ S V I+ S A +T +Y G
Sbjct: 1614 VWGEDTCGQLGIRGLQA-ARSPSLMQSLLATSIVH-ISANSDMSAFVTDSGSLYVSGGSE 1671
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+GRLG G +P + +L ++ +ACGT A+ K V
Sbjct: 1672 HGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRV 1716
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ ++ G +A + +G +F+WG+ +LGH + +P+ ++ + + + V+ G+
Sbjct: 722 IVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGD 781
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
H A+ SG Y+WG+G+ G LGHG
Sbjct: 782 SHMLALDYSGLPYSWGNGSA--GQLGHGE 808
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 188/388 (48%), Gaps = 37/388 (9%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDG 155
V WG G+ G + P L+D L +++ I V+CG ++ A+T SGDL WG G
Sbjct: 10 VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYG 69
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LG GN VP RVN L+ +V ++C HTA + S G+L+T+G G L
Sbjct: 70 --GCGQLGFGNLEDCLVP-RVNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNGKL 124
Query: 216 GHGD------RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GHG VS P +V++L+G + ++ +CG +HT + + K
Sbjct: 125 GHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD------------DKKAL 172
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG G +GRLGHGD + P + +L ++CG T L +G +Y G +G
Sbjct: 173 TWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232
Query: 330 QLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH--- 385
+LG D L P +EG L + +++ GS H A +T +VYTWG+G GRLGH
Sbjct: 233 KLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFN 290
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSGCRLPFNN 441
G D SP + L+ + I+CG + + A+ ++ W G+ +++ G + N
Sbjct: 291 GPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTW--GMTKNIGHGIQGIHPN 348
Query: 442 FKRKRHNCYNCGLVFCHSCSSKKSLKAS 469
K N +V CSS S+ S
Sbjct: 349 MPSKHPILQNKNIVQV-VCSSSHSIALS 375
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 171/345 (49%), Gaps = 40/345 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD+ +WG G G G LG FG D +P+ + + +V +AC RH A +
Sbjct: 61 GDLILWGYG-GCGQLG---------FGNLEDCLVPRV--NLSLKNVIQVACSDRHTAAIL 108
Query: 93 KQGEVFSWGEESGGRLGHG-----VDSDVL-HPKLIDALSNMNIELVACGEYHTCAVTLS 146
GE+++WG G+LGHG + ++V+ P + AL + V+CG YHT +T
Sbjct: 109 SNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD 168
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
TWG G G LGHG+ + PK + L G+ + ISCG HTA++ G+L+
Sbjct: 169 KKALTWGLGLQ--GRLGHGDTQDIFTPKLIE-SLAGLPIKEISCGGHHTAILLVTGKLYM 225
Query: 207 FGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
FG G FG LG G V IPR +E L+ ++ + + G H+AAV +
Sbjct: 226 FGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKC------------ 273
Query: 266 GKLFTWGDGDKGRLGH---GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
GK++TWG G GRLGH G + L P ++ L + ++CG+S +VAL+ G +YT
Sbjct: 274 GKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYT 331
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
G G +P++ +K+ V ++ C S H L+
Sbjct: 332 WGMTKNIGHGIQGIHPNMPSKHPILQNKNIV-QVVCSSSHSIALS 375
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 158/331 (47%), Gaps = 33/331 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG + +G LG G + V KALE V+ V +CG H +
Sbjct: 111 GELYTWG-CSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQV---SCGSYHTGCLT 166
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ +WG GRLGHG D+ PKLI++L+ + I+ ++CG +HT + ++G LY +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G FG LG G+ +P+ + GPLE I ++ +S G H+A VT G+++T+G G
Sbjct: 227 GGGA--FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282
Query: 213 GVLGH---GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGH G P+ + +L+ V +CG H+ A+ +V G ++
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDV------------GDIY 330
Query: 270 TWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
TWG +GHG + +P+ L N +V C S ++AL+ G + S
Sbjct: 331 TWGMTK--NIGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIALSDIGALVQKSSETR 388
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
PQ+ L E K + +EE G
Sbjct: 389 ----KPQS---LAEDQEPKKADQSIEEFKTG 412
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 182/350 (52%), Gaps = 22/350 (6%)
Query: 53 RVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV 112
++G+ +K S P A ++ V+ +ACGG+H + + G+V+S G G+LGH
Sbjct: 11 QLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSH 70
Query: 113 DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW- 171
+ HP + L+ +I+ +ACG+ H+ A++L G+LY+WG G N G LGH V H+
Sbjct: 71 EGT--HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAG--NDGQLGHAT-VEHYS 125
Query: 172 -VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREV 229
+P R+ L + +SCG H + GQLFT+G T G LG G+ S S P++V
Sbjct: 126 RIP-RIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKV 184
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
+SL+G+ + G G+ S + SG +F WG G+LG D++ K
Sbjct: 185 KSLEGIPLAQVTAG------------GSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKET 232
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLS 349
P V L ++CG T LT +G ++T G+ GQLG+ ++ R +L
Sbjct: 233 PCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELM 292
Query: 350 KSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
S V +IACG H +A + S +Y +G G G+LG G ++ P++V+
Sbjct: 293 GSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 155/328 (47%), Gaps = 25/328 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG- 153
+ WG + G+LG H + + V P ++ VACG HT + G +Y+ G
Sbjct: 1 MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGW 60
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+G G LGH +E +H P L H+ I+CG H+ ++ G L+++G G G
Sbjct: 61 NGE---GQLGHSHEGTHPAPV---ATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDG 114
Query: 214 VLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LGH + S IPR ++ L + + +CG H A+ + G+LFTWG
Sbjct: 115 QLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGD------------DGQLFTWG 162
Query: 273 DGDKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G+ ++ P V +L +V G S + AL+ SG V+ G GQL
Sbjct: 163 QNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQL 222
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G N + + P V+ L V I+CG H A+LT ++T+G G +G+LGH +
Sbjct: 223 GLNDEQVKETPCHVK-PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHN 281
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 282 EINPRRVLELMGSEVSQIACGRKHTLAF 309
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSF-----VEEIACGSYHVAVLTSKTEVYTWGKG 378
G +GQLGN + L N V + +F V+E+ACG H L +VY+ G
Sbjct: 5 GHSAFGQLGNGHS---LKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWN 61
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
G+LGH + + P+ V L ++ +K IACG + + A+ L+ W +G D
Sbjct: 62 GEGQLGH--SHEGTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGND 113
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 170/338 (50%), Gaps = 23/338 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ I+CG H ALV K G VF +G+ G+LG G V P + +L VACG+
Sbjct: 38 VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTA 196
HT T ++ +G + G LG G+ WVP+ ++ LE ++ ++S G H+A
Sbjct: 98 SHTLISTECNKIFAFGCNSD--GQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSA 155
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+T G ++ +GD + G G + + PR++E + ++ +CG +HTA +
Sbjct: 156 FLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFI------ 207
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
S GK++T+G+ D G+LG DK VP V ++ N V CG S T+ LT
Sbjct: 208 -------SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVE--LDENCISVKCGGSHTIILTE 258
Query: 317 SGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
SG Y GS GQ LGN + + +P RV + + CG H A LT + ++YT
Sbjct: 259 SGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYT 318
Query: 375 WGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACG 411
G G NG+L + D + + +P+ +E K ++CG
Sbjct: 319 CGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCG 356
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 158/341 (46%), Gaps = 39/341 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF++G+ G LG G ++ + P L+S ++ACG H +
Sbjct: 55 GRVFLFGKNDF-GQLGFGHTKI---------VNKPSCLKSLKPFQSIHVACGKSHTLIST 104
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLI--DALSNMNIELVACGEYHTCAVTLSGDLY 150
+ ++F++G S G+LG G D P++I D NI ++ G +H+ +T G +Y
Sbjct: 105 ECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVY 164
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRV--NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
WGD + G G NE P+++ P ++SISCG +HTA + S G+++TFG
Sbjct: 165 IWGDNSD--GQCGIKNENYLLNPRKIEFQNP-----INSISCGYYHTAFI-SLGKVYTFG 216
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
+ G LG D+ +P VE + +V+ CG HT + E SGK
Sbjct: 217 EDDNGKLGRSDKLPNDVPEGVELDENCISVK--CGGSHTIILTE------------SGKA 262
Query: 269 FTWGDGDKGRLGHGDKEAKL-VPTCVAALVEP-NFCRVACGHSLTVALTTSGHVYTMGSP 326
+ +G G+LG G+ E + +P V E N V CG S + LT G +YT G
Sbjct: 263 YAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDG 322
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFV-EEIACGSYHVAVL 366
G+L N + ++ KSF ++CG H VL
Sbjct: 323 RNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVL 363
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 117/237 (49%), Gaps = 21/237 (8%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V ISCG HTA+V +G++F FG FG LG G K V+ P ++SLK +++ ACG
Sbjct: 38 VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFC 302
HT E K+F +G G+LG GD + + VP ++ +E N
Sbjct: 98 SHTLISTEC------------NKIFAFGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNII 145
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSY 361
++ G + LT G VY G GQ G + L P ++E ++ + I+CG Y
Sbjct: 146 ALSAGCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIE---FQNPINSISCGYY 202
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H A + S +VYT+G+ NG+LG D + P VE D+ S+ CG + T +
Sbjct: 203 HTAFI-SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVEL--DENCISVKCGGSHTIIL 256
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 170/333 (51%), Gaps = 29/333 (8%)
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI 130
E ++L + G H A++++ G++F+WGE GRLGHG + + PK + AL+N+ +
Sbjct: 128 EERIIL----VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPM 183
Query: 131 ELVACGEYHTCAV--TLSGDLYTWGDGTYNFGLLGHGN--EVSHWVPKRVNGPLEGIHVS 186
+ V CG T A+ T LYTWG+ FG LG G+ + +P+ V P +
Sbjct: 184 KYVFCGGRSTIALSHTAGSGLYTWGNN--EFGQLGRGDCGDDFTCLPESVAVP-GAKRLV 240
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++ G AV+ S+G LFT+G G G LGHGD ++ P V SL G V A G H
Sbjct: 241 ALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGH 300
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA-KLVPTCVAALVE-PNFCRV 304
+ A+ + +G+LF+WG G+ G+LGHG ++ +L P + V+ P +
Sbjct: 301 SLALTK------------AGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGI 348
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG---KLPNRVEGKLSKSFVEEIACGSY 361
+ G +VA G VY G YG LG +D +P R+ F + I+CG
Sbjct: 349 SAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRF-KTISCGFQ 407
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
H LTS +Y+WG G GRLG + ++ +P
Sbjct: 408 HTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAP 440
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 158/331 (47%), Gaps = 37/331 (11%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
I LV G H ++ SG L+TWG+G Y G LGHG+E S PK+V L I + +
Sbjct: 131 IILVNAGAAHIAMISQSGKLFTWGEGQY--GRLGHGDEESISTPKQVVA-LANIPMKYVF 187
Query: 190 CGPWHTAVV--TSAGQLFTFGDGTFGVLGHGD--RKSVSIPREVESLKGLRTVRAACGVW 245
CG T + T+ L+T+G+ FG LG GD +P V R V G
Sbjct: 188 CGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGA- 246
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
AAV++ SSG LFTWG GD GRLGHGD E + PT V++L VA
Sbjct: 247 SRAAVID-----------SSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVA 295
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGN--PQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
G ++ALT +G +++ G GQLG+ Q+ P +++ + + I+ G YH
Sbjct: 296 LGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHS 355
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDD--RNSPSLVEALKDKQVKSIACGTNFTAAI--- 418
VY WG G LG GD+DD N P + + + K+I+CG T A+
Sbjct: 356 VAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALTSD 415
Query: 419 -CLHKWVSGV--------DQSMCS--GCRLP 438
++ W G+ +++ C+ C +P
Sbjct: 416 NTIYSWGCGLGGRLGTFNEKNQCAPIACNIP 446
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 178/337 (52%), Gaps = 20/337 (5%)
Query: 52 NRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG 111
+++G G K+ +P E+ L+V +A G + V +G+V++ GE + GRLG G
Sbjct: 8 DQLGGLKGSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG 65
Query: 112 VDSDVLH-PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
+ S + P+ I ALS+ ++ VA G H A+T+ G ++ WG+G + G LGH + +
Sbjct: 66 ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEG--DDGKLGHFSRM 123
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
+ P+ + L+ + I+CG H+A +TS+G+L+T+G G +G LGHGD + P+
Sbjct: 124 NCDKPRLIE-ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 182
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
V+ L G R ++ ACG + + G +F+WGDGD G+LG G E
Sbjct: 183 VKVLLGHRVIQVACGSRDAQTL----------ALTDEGLVFSWGDGDFGKLGRGGSEGCN 232
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGK 347
+P + L C++ CG ++ALT SG V+T G Y +LG+ + P VEG
Sbjct: 233 IPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 292
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
K V +A G+ H +T +VY WG +G+ G
Sbjct: 293 RGKKIV-HVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 163/334 (48%), Gaps = 40/334 (11%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
WG +LG S + P + LS +N+ VA G AVT+ G +Y G+ T
Sbjct: 2 WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATN-- 59
Query: 160 GLLGHG------------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
G LG G +S +V K+V ++ G H +T G++F +
Sbjct: 60 GRLGLGISSGTVPIPRQITALSSYVVKKV----------AVHSGGRHATALTVDGKVFWW 109
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+G G LGH R + PR +E+LK R ACG H+AA+ SSG+
Sbjct: 110 GEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGE 157
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGS 325
L+TWG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G
Sbjct: 158 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 217
Query: 326 PVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+G+LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RLG
Sbjct: 218 GDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLG 276
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
HG P +VE L+ K++ +A G A+
Sbjct: 277 HGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 310
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 27/232 (11%)
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
+ +P E+L L V+ A G + ++ V V GK++ G+ GRLG G
Sbjct: 18 IKVPSFSETLSALNVVQVAGG---SKSLFAVTV---------EGKVYACGEATNGRLGLG 65
Query: 283 DKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGN-PQADG 338
+ +P + AL +VA G ALT G V+ G G+LG+ + +
Sbjct: 66 ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNC 125
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
P +E L + +IACGS H A LTS E+YTWG G GRLGHGD + P +V+
Sbjct: 126 DKPRLIE-ALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 184
Query: 399 ALKDKQVKSIACGTNFTAAICL------HKWVSG----VDQSMCSGCRLPFN 440
L +V +ACG+ + L W G + + GC +P N
Sbjct: 185 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN 236
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 184/386 (47%), Gaps = 32/386 (8%)
Query: 45 GVLGGGLNRVGS-CFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
G G N G C +D +LP + + + ++ACG A + + G+VF+ G
Sbjct: 12 GAYSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGL 161
G+ G G S V +L+ AL +I + A G H A++ SG LYT+G + G
Sbjct: 72 DSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSR--GQ 129
Query: 162 LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
LGHG+ P ++ L HV ++C +HT V+T G L+ FG G LG D
Sbjct: 130 LGHGSTNPITTPTKIKD-LASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGM 188
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
+P + + ACG HT + ++G + +G D G+LG
Sbjct: 189 DRHVPVPLTYFNSRPVLAVACGQHHTVV------------SLTNGGVVAFGKNDHGQLGT 236
Query: 282 G---DKEAKLVPTCVAA----LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
G D A P+ +AA LV P+ +ACG+ T+AL G VY+ G YGQLG+
Sbjct: 237 GYTLDYHAS--PSLLAAPLDSLVVPS---LACGYYHTIALAEHGSVYSFGRNDYGQLGHG 291
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+ L+K+ ++ CG YH VL+ +VY +G+ +G+LG G+ D SP
Sbjct: 292 HRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSP 351
Query: 395 SLVEALKDKQVKSIACGTNFTAAICL 420
++ +L+DK V +A G F +ICL
Sbjct: 352 QIIASLRDKFVVKVASG--FYHSICL 375
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 197/465 (42%), Gaps = 94/465 (20%)
Query: 42 TGDGVLGGGLNRVGSCFGVKMDSSLP--KALESAVVLDVQNI--ACGGRHAALVNKQGEV 97
TGD V G N G C G+ S + + + + V D+ +I A G H +++ G +
Sbjct: 62 TGD-VFTCGYNDSGQC-GIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGAL 119
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG---- 153
+++G S G+LGHG + + P I L++ ++ VAC +HT +T+ G LY +G
Sbjct: 120 YTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDL 179
Query: 154 ------DG---------TY-------------------------------NFGLLGHGNE 167
DG TY + G LG G
Sbjct: 180 GQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYT 239
Query: 168 VS-HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
+ H P + PL+ + V S++CG +HT + G +++FG +G LGHG R +S P
Sbjct: 240 LDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEP 299
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
+++L V+ CG +HT + E GK++ +G + G+LG G+
Sbjct: 300 TLIKALAKTHAVQVTCGCYHTLVLSE------------DGKVYPFGRNNHGQLGLGNLID 347
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---PNR 343
P +A+L + +VA G ++ LT + + ++GS + Q GKL P R
Sbjct: 348 CTSPQIIASLRDKFVVKVASGFYHSICLTATKN--SVGSRMDTSHTLCQDLGKLVNNPMR 405
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS-------- 395
+ S V+ A H V+ ++ E K GR+ G + N P
Sbjct: 406 SDLVFVLSGVQIHA----HSCVVMARCE--PLEKMLGGRMIEGSLSEINIPDYSPEVFQV 459
Query: 396 LVEALKDKQVKSIACGTNFTAAICLHKWVSGVD----QSMCSGCR 436
+E L +V SI T A+ L + ++ D Q +CS C
Sbjct: 460 FLEYLYTDEVASIQ--TTEPDAVFLLELLALADQYLVQRLCSMCE 502
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 172/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADEHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEESVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D+E + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADEHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG + V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 172/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGN--QPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 164/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G G + V P+ +S+ +++ VACG H + G++YT G
Sbjct: 1 MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNQ--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------ATDGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNQPEQIGALADQHIIHVACGESHSLALSDQ 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQTSPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 176/363 (48%), Gaps = 28/363 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G S P A+ S + V IA GG H + G V+ WG + G+LG G D+D
Sbjct: 395 GTTTARSTPAAV-SGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSST 453
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L++ +E +A G +HTCA+T SG ++ WG N G LG G+ + H P V+G
Sbjct: 454 PVAVSGLAS-GVETIAAGGWHTCALTSSGGVWCWGR--NNSGQLGDGSTIYHITPVAVSG 510
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
G V++I+ G +HT +T +G ++ +G G LG G S P V L TV
Sbjct: 511 LPSG--VTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTV 568
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
AA G +HT A+ SSG ++ WG G+LG G + P V+ L
Sbjct: 569 IAA-GRFHTCALT------------SSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGL-P 614
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR-VEGKLS--KSFVEE 355
+A G T ALT+SG V+ G YGQLG DG NR G +S S V
Sbjct: 615 SGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLG----DGTTTNRSTPGAVSGLPSGVTA 670
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
IA G H LTS EV+ WG G+LG G T +R++P V L V +IA G T
Sbjct: 671 IAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG-VTAIAAGVYHT 729
Query: 416 AAI 418
A+
Sbjct: 730 CAL 732
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 168/355 (47%), Gaps = 30/355 (8%)
Query: 45 GVLGGGLNRVGSCF-GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
GV GLN G G DSS P A+ S + V+ IA GG H + G V+ WG
Sbjct: 431 GVWCWGLNNSGQLGDGSDTDSSTPVAV-SGLASGVETIAAGGWHTCALTSSGGVWCWGRN 489
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLL 162
+ G+LG G + P + L + + +A G+YHTCA+T SG ++ WG YN G L
Sbjct: 490 NSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWG---YNLSGQL 545
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
G G P V+G G+ V I+ G +HT +TS+G ++ +G G LG G +
Sbjct: 546 GDGTTTDRSTPVAVSGLTSGVTV--IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTN 603
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
+ P V L T AA G WHT A+ SSG+++ WGD G+LG G
Sbjct: 604 RTTPVAVSGLPSGVTAIAA-GGWHTCALT------------SSGEVWCWGDNYYGQLGDG 650
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN 342
+ P V+ L +A G T ALT+SG V+ G YGQLG DG N
Sbjct: 651 TTTNRSTPGAVSGL-PSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLG----DGTTTN 705
Query: 343 R-VEGKLS--KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
R G +S S V IA G YH LT V WG +G+LG G R +P
Sbjct: 706 RSTPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 161/339 (47%), Gaps = 23/339 (6%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
IA GG H + G V+ WG G+LG G D+D P + L + + +A G+YHT
Sbjct: 263 IAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPS-GVTAIAAGDYHT 321
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
CA+T SG+++ WG FG LG G + P V+G G+ +I+ G +HT + S
Sbjct: 322 CALTGSGEVWCWGG--NGFGQLGDGTTTARSTPAAVSGLPSGVE--TIAAGDYHTCALMS 377
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G ++ +G G LG G + S P V L T AA G+ HT A++
Sbjct: 378 SGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGL-HTCALM--------- 427
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
SSG ++ WG + G+LG G P V+ L +A G T ALT+SG V
Sbjct: 428 ---SSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGV 483
Query: 321 YTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+ G GQLG+ + P V G S V IA G YH LT V+ WG
Sbjct: 484 WCWGRNNSGQLGDGSTIYHITPVAVSGL--PSGVTAIAAGDYHTCALTGSGGVWCWGYNL 541
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+LG G T DR++P V L V IA G T A+
Sbjct: 542 SGQLGDGTTTDRSTPVAVSGLTSG-VTVIAAGRFHTCAL 579
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 176/389 (45%), Gaps = 38/389 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G ++G G S P A+ S + V+ IA G H +
Sbjct: 328 GEVWCWG--------GNGFGQLGD--GTTTARSTPAAV-SGLPSGVETIAAGDYHTCALM 376
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V+ WG + G+LG G + P + L + + +A G HTCA+ SG ++ W
Sbjct: 377 SSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPS-GVTAIAAGGLHTCALMSSGGVWCW 435
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G N G LG G++ P V+G G+ +I+ G WHT +TS+G ++ +G
Sbjct: 436 G--LNNSGQLGDGSDTDSSTPVAVSGLASGVE--TIAAGGWHTCALTSSGGVWCWGRNNS 491
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G P V L T AA G +HT A+ SG ++ WG
Sbjct: 492 GQLGDGSTIYHITPVAVSGLPSGVTAIAA-GDYHTCALT------------GSGGVWCWG 538
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + P V+ L +A G T ALT+SG V+ G+ GQLG
Sbjct: 539 YNLSGQLGDGTTTDRSTPVAVSGLTS-GVTVIAAGRFHTCALTSSGGVWCWGANFDGQLG 597
Query: 333 NPQADGKLPNR---VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
DG NR V S V IA G +H LTS EV+ WG G+LG G T
Sbjct: 598 ----DGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTT 653
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+R++P V L V +IA G T A+
Sbjct: 654 NRSTPGAVSGLPSG-VTAIAAGWEHTCAL 681
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 167/362 (46%), Gaps = 25/362 (6%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G S P A+ S + V IA G H + G V WG G+LG+G+
Sbjct: 88 GTPTTRSTPGAV-SGLPSGVTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRST 146
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + + +A G HTCA+ SG + WGD Y G LG G + P V+G
Sbjct: 147 PGAVSGLPS-GVTAIAAGGDHTCALMSSGGVMCWGDNYY--GQLGDGTTTNRRTPVAVSG 203
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRT 237
G V++I+ G HT +T +G+++ +G +G LG G S S P V L T
Sbjct: 204 LPSG--VTAIAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMT 261
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
AA G+ HT A++ SSG ++ WG D G+LG G P V+ L
Sbjct: 262 AIAAGGL-HTCALM------------SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL- 307
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEI 356
+A G T ALT SG V+ G +GQLG+ + P V G S VE I
Sbjct: 308 PSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGL--PSGVETI 365
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G YH L S V+ WG+ +G+LG G T R++P+ V L V +IA G T
Sbjct: 366 AAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG-VTAIAAGGLHTC 424
Query: 417 AI 418
A+
Sbjct: 425 AL 426
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 157/344 (45%), Gaps = 26/344 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA GG H + G V WG G+LG G + P + L + + +A G
Sbjct: 55 VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGN 113
Query: 138 YHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
YHTCA+T SG + WG N+ G LG+G P V+G G V++I+ G HT
Sbjct: 114 YHTCALTGSGGVRCWGA---NYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIAAGGDHTC 168
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+ S+G + +GD +G LG G + P V L T AA G+ HT A+
Sbjct: 169 ALMSSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGL-HTCALT----- 222
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG+++ WG G+LG G ++ P V L +A G T AL
Sbjct: 223 -------GSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGL-PSGMTAIAAGGLHTCALM 274
Query: 316 TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
+SG V+ G GQLG+ D P V G S V IA G YH LT EV+
Sbjct: 275 SSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGL--PSGVTAIAAGDYHTCALTGSGEVWC 332
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG G+LG G T R++P+ V L V++IA G T A+
Sbjct: 333 WGGNGFGQLGDGTTTARSTPAAVSGLPSG-VETIAAGDYHTCAL 375
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
PL+G V++I+ G HT +T +G + +G FG LG G + S P V L T
Sbjct: 51 PLQG--VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTA 108
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
AA G +HT A+ SG + WG G+LG+G + P V+ L
Sbjct: 109 IAA-GNYHTCALT------------GSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGL-P 154
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVEE 355
+A G T AL +SG V G YGQLG DG NR V S V
Sbjct: 155 SGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLG----DGTTTNRRTPVAVSGLPSGVTA 210
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD-DRNSPSLVEALKDKQVKSIACGTNF 414
IA G H LT EV+ WG G+LG G T R++P+ V L + +IA G
Sbjct: 211 IAAGGLHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSG-MTAIAAGGLH 269
Query: 415 TAAI 418
T A+
Sbjct: 270 TCAL 273
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 186/386 (48%), Gaps = 26/386 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + +V+++ CG RH V G V++ G G+LGH D P+ + AL
Sbjct: 25 PRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGH--DKSRKKPEQVGALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHV 185
I V+CGE HT A+ G +++WG + G +G + VP+ + L I +
Sbjct: 83 AQIIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGVSIAEDYIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG H+ ++ ++++G +G LG G +++ S PR ++SL G+ A G
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ A+ SG +F WG G+LG D+ + P + +L +
Sbjct: 200 GHSFALT------------ISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-V 363
CG T ALT G V+T G+ YGQLG+ A ++ R +L + V +IACG H +
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTL 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
A + S +Y++G G NG+LG G T ++ SPS+V+ + C+ +
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEANGCYCVKRI 367
Query: 424 VSGVDQSMC-----SGCRLPFNNFKR 444
SG DQS C LP ++F++
Sbjct: 368 YSGGDQSFAHYFTIQNC-LPPDDFRK 392
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 161/327 (49%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D +V + P+ D N N+ V CG HT V G +YT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LGH + S P++V G L+ + ++SCG HT + GQ+F++G G
Sbjct: 59 GCNDLGQLGH--DKSRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115
Query: 215 LGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G + + +PR ++SL ++ V+ ACG H+ A+ S SN +++WG
Sbjct: 116 IGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLAL-------SKESN-----IYSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G +K + P + +L F +A G + ALT SG ++ G +GQLG
Sbjct: 164 NQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D P ++ S+ + I CG H A LT + V+T+G G G+LGH
Sbjct: 224 LNDETDRSDPALLKSLRSQKII-YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T A
Sbjct: 283 VNPRKVFELMGNIVTQIACGRQHTLAF 309
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDA 124
+P+ ++S + + +ACG H+ ++K+ ++SWG+ G+LG G + P+ I +
Sbjct: 127 VPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKS 186
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
LS + +A G H+ A+T+SG ++ WG FG LG +E P + L
Sbjct: 187 LSGIPFAHIAAGGGHSFALTISGAIFGWGRN--KFGQLGLNDETDRSDPALLKS-LRSQK 243
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ I CG HTA +T G +FTFG G +G LGH PR+V L G + ACG
Sbjct: 244 IIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGR 303
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
HT A V SSG+++++G G G+LG G K P+ V
Sbjct: 304 QHTLAFVP-----------SSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 3 AMAMDAFRVSLSSAVSSSSQ----GSGHDDGDALG---DVFIWGEGTGDGVLGGGLNRVG 55
++A D RV + S Q GH AL +++ WG+ G LG G
Sbjct: 119 SIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY-GQLGLG----- 172
Query: 56 SCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD 115
K S P+ ++S + +IA GG H+ + G +F WG G+LG ++D
Sbjct: 173 ---SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETD 229
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P L+ +L + I + CGE HT A+T G ++T+G G Y G LGH N SH V R
Sbjct: 230 RSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGY--GQLGH-NSASHEVNPR 286
Query: 176 VNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
L G V+ I+CG HT A V S+G++++FG G G LG G + P V+
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 188/381 (49%), Gaps = 31/381 (8%)
Query: 50 GLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
GLN +G G + + P +E+ + +A G A ++ G+V++WG G+L
Sbjct: 64 GLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYGKL 123
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
GH DS+ P+L++AL NI V+ G H A+ G LY WG G G
Sbjct: 124 GHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAASA----GSGGTE 179
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
++P+ + G LE V S+SCG HTA VT G+++T+G+G G LGHG++ S P++
Sbjct: 180 HVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKK 239
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG----HGDK 284
V+SL + V ACG T V C SG L++ G D G+LG HG++
Sbjct: 240 VQSLT-EKVVDVACGRDFTIFV------------CESG-LYSCGADDYGQLGLGRSHGER 285
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNR 343
+ P ++ + ++ G AL G VYT G GQLG+ +AD L
Sbjct: 286 FVQ-TPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKP 344
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD-----RNSPSLVE 398
V+ L + ++ACG H A +T +YTWG+G +G+LG G + R SP V
Sbjct: 345 VD-NLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTSPVQVT 403
Query: 399 ALKDKQVKSIACGTNFTAAIC 419
+L V + G++ +A +C
Sbjct: 404 SLPAGAVLYVTLGSDHSAVLC 424
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 110/224 (49%), Gaps = 14/224 (6%)
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A + + L TFG G LG G + P VE+L G R V A G TAA+
Sbjct: 52 AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAI----- 106
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G ++TWG G+ G+LGH D + +P V AL N +V+ G + A+
Sbjct: 107 -------SLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAID 159
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
GH+Y G G + +P ++G L K V ++CG H A +T K EV+TW
Sbjct: 160 KDGHLYCWGRAASAGSGGTEHV-FIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTW 218
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G G G LGHG+ + + P V++L +K V +ACG +FT +C
Sbjct: 219 GNGYEGELGHGEKNSQYQPKKVQSLTEK-VVDVACGRDFTIFVC 261
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 145/305 (47%), Gaps = 35/305 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDV+ WG G G LG + + +LP+ +E+ ++ ++ GG H A ++
Sbjct: 110 GDVYTWGSGE-YGKLGHNDDS---------NENLPRLVEALKGKNIVKVSIGGNHMAAID 159
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYT 151
K G ++ WG + G G V P+LI L + V+CG HT AVT G+++T
Sbjct: 160 KDGHLYCWGRAASA--GSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWT 217
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G G LGHG + S + PK+V E V ++CG T V +G L++ G
Sbjct: 218 WGNGYE--GELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIFVCESG-LYSCGADD 272
Query: 212 FGVLG----HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+G LG HG+R V PR + V + G +H A+ G
Sbjct: 273 YGQLGLGRSHGER-FVQTPRSLSGTGLSDVVAISAGDYHVCAL------------GRDGL 319
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG G +G+LGHG+K + V L +VACG T A+T G +YT G
Sbjct: 320 VYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGR 379
Query: 328 YGQLG 332
GQLG
Sbjct: 380 DGQLG 384
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 179/367 (48%), Gaps = 28/367 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
D+F WG T G LG G G++ + L P ++ ++Q IACG + ++
Sbjct: 48 DMFCWG-NTRHGELGLG--------GIEDEIILVPCEVDFKKASEIQQIACGENYTVVIT 98
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+++S G G+LGH L +LI L + ACG YHT AV G L++W
Sbjct: 99 HDGKIYSCGNNDYGQLGHEQGRKRL--QLILGLDAFVFKKAACGAYHTIAVNEWGQLFSW 156
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G + G LG ++ R+ L + I+CG H +T+ G+L+++G +
Sbjct: 157 GSNSE--GQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSE 214
Query: 213 GVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G D + P+ + +L G+ ACG +H+ A+ SG +F W
Sbjct: 215 GQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAI------------SKSGAIFGW 262
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D + + +P + L C ACG +V LT G V+T G+ +YGQL
Sbjct: 263 GKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 322
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ T
Sbjct: 323 GHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRS 382
Query: 391 RNSPSLV 397
+P +V
Sbjct: 383 TTTPQVV 389
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 159/331 (48%), Gaps = 23/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
K+ ++F WG G LG G D +L P +D I+ +ACGE +T +T G +Y
Sbjct: 45 KKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGKIY 104
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+ G+ Y G LGH E + + G L+ +CG +HT V GQLF++G
Sbjct: 105 SCGNNDY--GQLGH--EQGRKRLQLILG-LDAFVFKKAACGAYHTIAVNEWGQLFSWGSN 159
Query: 211 TFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+ G LG + + PR V++L V+ ACG+ H A+ ++G+L+
Sbjct: 160 SEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALT------------NNGELY 207
Query: 270 TWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+WG +G+LG G D ++ P + L +ACG ++A++ SG ++ G +
Sbjct: 208 SWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTF 267
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG N + LP +++ L + V ACG LT V+T G G G+LGHG
Sbjct: 268 GQLGLNDTQNRNLPYQLQ-TLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGS 326
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++ P V L V I+CG T A+
Sbjct: 327 NNNEILPRQVMELMGSTVTQISCGKRHTLAL 357
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 110/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDQ 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 37/358 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + K P+ V+G + V++I G VL SK E Y+
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYS 385
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 40 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 97
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 98 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 154
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 155 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 209
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 210 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 322
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 323 FGCGARGQLGTGHTCNVKCPSPVK 346
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 5 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 64
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 65 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 119
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 120 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 167
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 168 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 227
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 228 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 286
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 287 VNPRRVLELMGSEVTQIACGRQHTLAF 313
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 37/358 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 51 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 106
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 107 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 166
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 167 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 223
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 224 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 271
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 272 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 331
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + K P+ V+G + V++I G VL SK E Y+
Sbjct: 332 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYS 389
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 160 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 210
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 271 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 328 RGQLGTGHTCNVKCPSPVK 346
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 170/325 (52%), Gaps = 20/325 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V+ +ACGG H+ + + GEV++ G + G+LGH D + P+ I AL+ +I VACG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEGSKPEQIGALAGQHIVHVACG 92
Query: 137 EYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
E H+ A++ G L++WG G+ GL + V+ VP+ + L + +SCG WH
Sbjct: 93 ESHSLALSDQGQLFSWGAGSDGQLGLTTIEDAVT--VPRLIK-KLNQQTILQVSCGNWHC 149
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + GQ FT+G ++G LG G S + P+ V+SL G+ + A G H+ A+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG G+LG D+ + P V L ++CG T L
Sbjct: 206 --------SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
T SG V+T G+ GQLG+ + ++ R +L S V +IACG +H +A + S +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVE 398
+G G G+LG G T + PS V+
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 169/327 (51%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSDVL--HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G G + V+ P++ + + N++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E S P+++ G L G H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHDCEGSK--PEQI-GALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +V++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGQ 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ S+ V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDERDRESPCHVKLLRSQKVVY-ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG + T A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAF 309
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 158/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + S P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQ 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+Y G LG G E S P+RV L+GI ++ ++ G H+ ++ +G +F +G +
Sbjct: 163 QNSY--GQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQL 327
Query: 332 GNPQA-DGKLPNRVEG 346
G + K P+ V+G
Sbjct: 328 GTGHTCNVKCPSPVKG 343
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG G C + P+ ++S + + +A GG H+ ++
Sbjct: 156 GQFFTWGQNSY-GQLGLG----KEC----PSQASPQRVKSLDGIPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ S G+LG + D P + L + + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G VS I+CG HT A V S+G ++ FG GT
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 164/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ ++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLTARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 180/368 (48%), Gaps = 30/368 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
++F WG T G LG G G++ ++ L P+ L+ +++ IACG + L+
Sbjct: 77 NMFCWG-STIHGELGLG--------GIEDENILVPRELDFQKATEIEQIACGENYTVLIT 127
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G+V+S G G+LGH L +LI L + VACG +HT AV G L++W
Sbjct: 128 RDGQVYSCGNNDYGQLGHEKGRKRL--QLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSW 185
Query: 153 GDGTYNFGLLG-HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G G LG + + VP V + V ++CG H +T+ G+L+++G +
Sbjct: 186 GSNAE--GQLGLNSKNLIECVPHMVRALGTSV-VVQVACGINHVLALTNNGKLYSWGSNS 242
Query: 212 FGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG G D K+ P+ + SL G+ CG +H+ A+ SG +F
Sbjct: 243 DGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAI------------SKSGAVFG 290
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG D + +P + L C ACG +V LT G V+T G+ +YGQ
Sbjct: 291 WGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQ 350
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ ++ R +L S V +I+CG H + ++ S+ VY WG G G+LG+ T
Sbjct: 351 LGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITR 410
Query: 390 DRNSPSLV 397
+P +V
Sbjct: 411 SVATPQVV 418
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 157/329 (47%), Gaps = 27/329 (8%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F WG G LG G D ++L P+ +D IE +ACGE +T +T G +Y+ G+
Sbjct: 78 MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137
Query: 155 GTYNFGLLGH--GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
Y G LGH G + +P L+ ++CG HT V GQLF++G
Sbjct: 138 NDY--GQLGHEKGRKRLQLIPG-----LDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAE 190
Query: 213 GVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG + + +P V +L V+ ACG+ H A+ ++GKL++W
Sbjct: 191 GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALT------------NNGKLYSW 238
Query: 272 GDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G D + ++ P +++L + CG ++A++ SG V+ G +GQ
Sbjct: 239 GSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + LP +++ L + V ACG LT V+T G G G+LGHG+T
Sbjct: 299 LGLNDTRNRNLPRQLQ-TLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTS 357
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P V L V I+CG T +
Sbjct: 358 NEILPRQVMELMGSTVTQISCGKRHTLGL 386
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 141/295 (47%), Gaps = 30/295 (10%)
Query: 131 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
E + EY T +++ WG + LG + + VP+ ++ + + I+C
Sbjct: 63 EPIIAVEYSTVT---DKNMFCWGSTIHGELGLGGIEDENILVPRELDFQ-KATEIEQIAC 118
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGH--GDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
G +T ++T GQ+++ G+ +G LGH G ++ IP L + ACG HT
Sbjct: 119 GENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKVACGAHHTL 174
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACG 307
AV E G+LF+WG +G+LG K + VP V AL +VACG
Sbjct: 175 AVNE------------WGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACG 222
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHV 363
+ +ALT +G +Y+ GS GQLG + N ++ KL S + I CG YH
Sbjct: 223 INHVLALTNNGKLYSWGSNSDGQLG---LGTDVKNEIKPKLISSLAGVPIAFITCGGYHS 279
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++ V+ WGK G+LG DT +RN P ++ L++ +V ACG F+ +
Sbjct: 280 MAISKSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFL 334
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 186/386 (48%), Gaps = 26/386 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + +V+++ CG RH V G V++ G G+LGH D P+ + AL
Sbjct: 25 PRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGH--DKSRKKPEQVGALD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHV 185
I V+CGE HT A+ G +++WG + G +G + VP+ + L I +
Sbjct: 83 AQIIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGVSIAEDYIRVPRNIKS-LSDIQI 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG H+ ++ ++++G +G LG G +++ S PR ++SL G+ A G
Sbjct: 140 VQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGG 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ A+ SG +F WG G+LG D+ + P + +L +
Sbjct: 200 GHSFALT------------ISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-V 363
CG T ALT G V+T G+ YGQLG+ A ++ R +L + V +IACG H +
Sbjct: 248 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTL 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
A + S +Y++G G NG+LG G T ++ SPS+V+ + C+ +
Sbjct: 308 AFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEANGCYCVKRI 367
Query: 424 VSGVDQSMC-----SGCRLPFNNFKR 444
SG DQS C LP ++F++
Sbjct: 368 YSGGDQSFAHYFTIQNC-LPPDDFRK 392
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 161/327 (49%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D +V + P+ D N N+ V CG HT V G +YT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LGH + S P++V G L+ + ++SCG HT + GQ+F++G G
Sbjct: 59 GCNDLGQLGH--DKSRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115
Query: 215 LGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G + + +PR ++SL ++ V+ ACG H+ A+ S SN +++WG
Sbjct: 116 IGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLAL-------SKESN-----IYSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G +K + P + +L F +A G + ALT SG ++ G +GQLG
Sbjct: 164 NQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D P ++ S+ + I CG H A LT + V+T+G G G+LGH
Sbjct: 224 LNDETDRSDPALLKSLRSQKII-YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T A
Sbjct: 283 VNPRKVFELMGNIVTQIACGRQHTLAF 309
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 115/229 (50%), Gaps = 15/229 (6%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDA 124
+P+ ++S + + +ACG H+ ++K+ ++SWG+ G+LG G + P+ I +
Sbjct: 127 VPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKS 186
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
LS + +A G H+ A+T+SG ++ WG FG LG +E P + L
Sbjct: 187 LSGIPFAHIAAGGGHSFALTISGAIFGWGRN--KFGQLGLNDETDRSDPALLKS-LRSQK 243
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ I CG HTA +T G +FTFG G +G LGH PR+V L G + ACG
Sbjct: 244 IIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIACGR 303
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
HT A V SSG+++++G G G+LG G K P+ V
Sbjct: 304 QHTLAFVP-----------SSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 3 AMAMDAFRVSLSSAVSSSSQ----GSGHDDGDALG---DVFIWGEGTGDGVLGGGLNRVG 55
++A D RV + S Q GH AL +++ WG+ G LG G
Sbjct: 119 SIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY-GQLGLG----- 172
Query: 56 SCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD 115
K S P+ ++S + +IA GG H+ + G +F WG G+LG ++D
Sbjct: 173 ---SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETD 229
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P L+ +L + I + CGE HT A+T G ++T+G G Y G LGH N SH V R
Sbjct: 230 RSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGY--GQLGH-NSASHEVNPR 286
Query: 176 VNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
L G V+ I+CG HT A V S+G++++FG G G LG G + P V+
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 163/340 (47%), Gaps = 34/340 (10%)
Query: 50 GLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG 109
GLN G G + + + P+ + + + ++ACG H+ ++ +G++FSWG S G+LG
Sbjct: 59 GLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 110 HGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
D V P+LI L+ I V+CG +H A+ G +TWG ++ G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEF 175
Query: 169 -SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
S P+RV LEGI ++ ++ G H+ ++ +G +F +G G LG D K P
Sbjct: 176 PSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
V+ L+ + V +CG HTA + + SG +FT+G G G+LGH +
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDE 282
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGNPQA-DGKLPNRVE 345
+ P V L+ ++ACG T+A +SG +Y G GQLG + K P+ V+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 346 G--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + V++I G VL SK E
Sbjct: 343 GYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G F WG+ + G LG +G F + ++LE + + +A GG H+
Sbjct: 154 ADGQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFA 204
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
++ G VF WG + G+LG + D P + L + ++CGE HT +T SG ++
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGD 209
T+G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG
Sbjct: 265 TFGAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 210 GTFGVLGHGDRKSVSIPREVE 230
G G LG G +V P V+
Sbjct: 322 GARGQLGTGHTCNVKCPSPVK 342
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 173/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 207 --------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 152/301 (50%), Gaps = 20/301 (6%)
Query: 50 GLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG 109
GLN G G + + + P+ + + + ++ACG H+ ++ +G++FSWG S G+LG
Sbjct: 59 GLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG 117
Query: 110 HGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
D V P+LI L+ I V+CG +H A+ G +TWG ++ G LG G E
Sbjct: 118 LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQLGLGKEF 175
Query: 169 -SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
S P+RV LEGI ++ ++ G H+ ++ +G +F +G G LG D K P
Sbjct: 176 PSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
V+ L+ + V +CG HTA + + SG +FT+G G G+LGH +
Sbjct: 235 HVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFGAGSCGQLGHDSMNDE 282
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGNPQA-DGKLPNRVE 345
+ P V L+ ++ACG T+A +SG +Y G GQLG + K P+ V+
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Query: 346 G 346
G
Sbjct: 343 G 343
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G F WG+ + G LG +G F + ++LE + + +A GG H+
Sbjct: 154 ADGQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFA 204
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
++ G VF WG + G+LG + D P + L + ++CGE HT +T SG ++
Sbjct: 205 LSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVF 264
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGD 209
T+G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG
Sbjct: 265 TFGAGSC--GQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGC 321
Query: 210 GTFGVLGHGDRKSVSIPREVE 230
G G LG G +V P V+
Sbjct: 322 GARGQLGTGHTCNVKCPSPVK 342
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 172/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + G H+ A+
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGA 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGR 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +V G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 150/312 (48%), Gaps = 33/312 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACG 136
+ ++ACG H+ ++ QG++FSWG S G+LG D V P+LI L+ I V+CG
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCG 145
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHT 195
+H A+ G +TWG ++ G LG G E S P+RV LEGI ++ + G H+
Sbjct: 146 NWHCLALAADGQFFTWGRNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVVAGGAHS 202
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ +G +F +G G LG D K P V+ L+ + V +CG HTA + +
Sbjct: 203 FALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK--- 259
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +FT+G G G+LGH ++ P V L+ ++ACG T+A
Sbjct: 260 ---------SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310
Query: 316 -TSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEG--------------KLSKSFVEEIACG 359
+SG +Y G GQLG + K P+ V+G + V++I G
Sbjct: 311 PSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSG 370
Query: 360 SYHVAVLTSKTE 371
VL SK E
Sbjct: 371 GDQTFVLCSKYE 382
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG + G LG +G F + ++LE + + + GG H+ ++
Sbjct: 156 GQFFTWGRNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVVAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 170/324 (52%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH A + + G V++ G G+LGH + P+ + AL I ++CGE
Sbjct: 36 VRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQIIVALSCGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +++WG G+ G LG N E VP+ + L + V+ ++CG WH+
Sbjct: 94 SHTLALNDKGQVFSWGLGSD--GQLGLNNFEECIRVPRNIKS-LSDVQVAQVACGYWHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ G +F++G +G LG G +S+S+P+ ++SL+G+ + A G H+ A+
Sbjct: 151 ALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + P + AL ++CG T ALT
Sbjct: 207 --------LSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTEVYT 374
G V+T G+ YGQLG+ + ++ R +L + V +IACG H T S ++ +
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G G NG+LG T +R SP+ V+
Sbjct: 319 FGLGGNGQLGTRSTCNRKSPAPVK 342
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 162/327 (49%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + V+ P+ + + V CG HT + G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V L+ + ++SCG HT + GQ+F++G G+ G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG + + + +PR ++SL ++ + ACG WH+ A+ G +F+WG
Sbjct: 116 LGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLAL------------SKGGHIFSWGQ 163
Query: 274 GDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + VP + +L F ++A G + + ALT SG V+ G +GQLG
Sbjct: 164 NRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N D P ++ S+ + I+CG H A LT + V+T+G G G+LGH T+
Sbjct: 224 LNDTNDRCFPALLKALRSQRVIY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T A
Sbjct: 283 VNPRKVFELMGNVVTQIACGRQHTLAF 309
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 122/249 (48%), Gaps = 24/249 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ DG LG LN C V P+ ++S + V +ACG H+ ++
Sbjct: 103 GQVFSWGLGS-DGQLG--LNNFEECIRV------PRNIKSLSDVQVAQVACGYWHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K G +FSWG+ G+LG G+ + P+ + +L + +A G H+ A+TLSG ++
Sbjct: 154 KGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG + P + L V ISCG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDTNDRCFPALLKA-LRSQRVIYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT A SSGK+ ++
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTP-----------SSGKMDSF 319
Query: 272 GDGDKGRLG 280
G G G+LG
Sbjct: 320 GLGGNGQLG 328
>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
Length = 1055
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 196/404 (48%), Gaps = 31/404 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
++ WG T G LG G G++ + + P+ ++ + +V + CG H + K
Sbjct: 3 IYCWG-NTAHGELGLG--------GIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTK 53
Query: 94 QGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+G++++ G G+LGH +D+ P+ + +L N I ++CG H+ A+T G +++W
Sbjct: 54 EGKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSW 113
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G LGH E R+ + HV I+ G +H +T+ G+L+ +G ++
Sbjct: 114 GSNA--VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSY 171
Query: 213 GVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G + V +P ++SL G+ ACG GN S + SG +F W
Sbjct: 172 GQLGIGTTSEKVPMPTLIQSLAGVPIAFIACG------------GNHSFAVSKSGAIFGW 219
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D ++ PT + L ++CG +V LT G V+T G+ +GQL
Sbjct: 220 GKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQL 279
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ ++ R +L S + +IACG H +A + S+ ++Y +G G G+LG G +
Sbjct: 280 GHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGN 339
Query: 391 RNSPSLVEALKDK-QVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
++P +V K KS C I +++ SG DQ S
Sbjct: 340 HSTPQIVRGPWFKTDFKSSDCDET---QIIVNRIFSGGDQCFVS 380
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 170/357 (47%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG T G LG G E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLATD--GQLGLPGTEECIRVPRNIKS-LSEIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G +G LG G + K + P ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + VPT + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +I CG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQSF 375
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 126/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLAT-DGQLG--LPGTEECIRV------PRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + + P +I +L + +A G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG ++ +VP + L V I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + CG HT A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+ WG+ G+LG G D+E L P + V CG TV + G VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG+ +A K P V G L + ++CG H L K +VY WG +G+LG
Sbjct: 61 NDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 386 GDTDD-RNSPSLVEALKDKQVKSIACGTNFTAAI 418
T++ P +++L + Q+ +ACG + A+
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL 152
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 170/357 (47%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG T G LG G E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLATD--GQLGLPGTEECIRVPRNIKS-LSEIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G +G LG G + K + P ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + VPT + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +I CG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQSF 375
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 126/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLAT-DGQLG--LPGTEECIRV------PRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + + P +I +L + +A G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG ++ +VP + L V I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + CG HT A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+ WG+ G+LG G D+E L P + V CG TV + G VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG+ +A K P V G L + ++CG H L K +VY WG +G+LG
Sbjct: 61 NDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 386 GDTDD-RNSPSLVEALKDKQVKSIACGTNFTAAI 418
T++ P +++L + Q+ +ACG + A+
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL 152
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 170/357 (47%), Gaps = 20/357 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 IRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +Y WG T G LG G E VP+ + L I + ++CG +H+
Sbjct: 94 AHTLALNDKGQVYAWGLATD--GQLGLPGTEECIRVPRNIKS-LSEIQIVQVACGYYHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ ++F++G +G LG G + K + P ++SL G+ + A G H+ +
Sbjct: 151 ALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + VPT + +L + CG T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G+ YGQLG+ ++ R +L S V +I CG H A + S +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG G T +R SP V+ + C+ + SG DQS
Sbjct: 319 FGLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQCLIPADSEQYYCVKRIFSGGDQSF 375
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 126/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG L C V P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWGLAT-DGQLG--LPGTEECIRV------PRNIKSLSEIQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + + P +I +L + +A G H+ +TLSG ++
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG ++ +VP + L V I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDDNDRYVPTLLKS-LRTQKVVHICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + CG HT A V SSG+++++
Sbjct: 271 YGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVP-----------SSGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTV 341
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+ WG+ G+LG G D+E L P + V CG TV + G VYT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG+ +A K P V G L + ++CG H L K +VY WG +G+LG
Sbjct: 61 NDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 386 GDTDD-RNSPSLVEALKDKQVKSIACGTNFTAAI 418
T++ P +++L + Q+ +ACG + A+
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL 152
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 180/357 (50%), Gaps = 38/357 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV--ACGEY 138
IACG H A V E+++WG+E GGR V + L P ++ L N I++V ACGE+
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGGR-KDNVQNTCL-PMRMENLHNQGIQVVSVACGEF 507
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
HT A+ G +Y+WG Y G LG G+ + + P + + + S+ CG +HT +
Sbjct: 508 HTIALCEEG-VYSWGSNEY--GQLGVGDTRTRYRPVLITH-ISSKQIVSVVCGAYHTLAI 563
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
TS +++++G G G LG ++ P++++ L + ++AA G H+A +
Sbjct: 564 TSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLT------- 616
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
S ++T+G G+LG G +++P V +L + ++CG T+A++
Sbjct: 617 -----SQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQ 671
Query: 319 HVYTMG-------------SPVYG-QLGNPQADGK---LPNRVEGKLSKSFVEEIACGSY 361
++ G S YG ++ + D P ++ +L + +I CG++
Sbjct: 672 TIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHP-ITQIFCGNW 730
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H +LTS +VYTWG G+LGH + D+++P LV+AL + + +A G F+ A
Sbjct: 731 HYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAF 787
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 44/368 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+++ WG+ G G N +C ++M++ + ++ V ++ACG H + +
Sbjct: 465 ELYTWGKECG----GRKDNVQNTCLPMRMENLHNQGIQ------VVSVACGEFHTIALCE 514
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+G V+SWG G+LG G P LI +S+ I V CG YHT A+T +Y+WG
Sbjct: 515 EG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWG 573
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G + G LG + + PK+++ L+ V + G H+AV+TS ++TFG +G
Sbjct: 574 WGVH--GQLGLKSVENQLTPKQID-LLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYG 630
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G IP+ V+SL +CG + T A+ E +F WG
Sbjct: 631 QLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISE------------DQTIFCWGR 678
Query: 274 ----------------GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G K D + P + ++ ++ CG+ + LT+
Sbjct: 679 NYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSV 738
Query: 318 GHVYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G GQLG+ + D P V+ + ++ + +A G+ + + WG
Sbjct: 739 NQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIG-VAVGAEFSVAFDADDNIMAWG 797
Query: 377 KGANGRLG 384
+ G++G
Sbjct: 798 RNDEGKIG 805
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 34/282 (12%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ ++ CG H + +V+SWG G+LG + L PK ID L + + A G
Sbjct: 550 IVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGY 609
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCGPWHTA 196
H+ +T +YT+G Y G LG G+ +P+ V+ L+ I++ ISCGP+ T
Sbjct: 610 AHSAVLTSQRYVYTFGADLY--GQLGIGSHYKQVIPQLVDSLTLDSIYL--ISCGPFETI 665
Query: 197 VVTSAGQLFTFGDG--TFGVLGHGD-----RKSVSIPREV------ESLKGLR---TVRA 240
++ +F +G F + + RK S +++ E+L+ +
Sbjct: 666 AISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQI 725
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG WH + V +++TWG D G+LGH +K + P V AL+
Sbjct: 726 FCGNWHYIILTSV------------NQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRA 773
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN 342
VA G +VA ++ G G++G + +G L N
Sbjct: 774 IIGVAVGAEFSVAFDADDNIMAWGRNDEGKIG-IENEGNLGN 814
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 25/192 (13%)
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
R ACG H A V ++ +L+TWG GR + + TC+ +E
Sbjct: 449 RIACGRNHIAFVT------------NNKELYTWGKECGGR------KDNVQNTCLPMRME 490
Query: 299 ------PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
VACG T+AL G VY+ GS YGQLG + + +S
Sbjct: 491 NLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQ 549
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ + CG+YH +TS +VY+WG G +G+LG +++ +P ++ L +V A G
Sbjct: 550 IVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGY 609
Query: 413 NFTAAICLHKWV 424
+A + ++V
Sbjct: 610 AHSAVLTSQRYV 621
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 172/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDQGQLFSWGAGSDGQLGLMTIEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + G H+ A+
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGV 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGR 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +V G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 169/355 (47%), Gaps = 37/355 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V G+N G G + + + P+ + + + ++ACG H+ ++ Q
Sbjct: 47 VFLLEDGE---VYTCGVNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDQ 102
Query: 95 GEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG ++ V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ + G H+ ++ +G +F +G
Sbjct: 163 RNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + SG +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------SGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTE 371
G + K P+ V+G + V++I G VL SK E
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYE 382
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG + G LG +G F + ++LE + + + GG H+ ++
Sbjct: 156 GQFFTWGRNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVVAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 178/381 (46%), Gaps = 45/381 (11%)
Query: 63 DSSLPKALESAVVL---DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
D++ K+ E L ++ I G H ++ G+VF+ G G+ G G + V H
Sbjct: 579 DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHL 638
Query: 120 KLIDALSNMNIELVAC-GEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
I + + + + A G HT V+ G + T G YN+ G LGHGN S VPK +
Sbjct: 639 SEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCG---YNYRGQLGHGNTTSESVPKIIR 695
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQL---FTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
LE V +SC +HT + G L +TFG +G LGH D IP+ VE+L
Sbjct: 696 S-LENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD 754
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
+ V ACG +HT V +SGK F +G D G+LG E +L P V
Sbjct: 755 QQIVSVACGQYHTMVVT------------ASGKAFAFGKNDYGQLGIDTMENQLAPVQVR 802
Query: 295 ALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG----------NPQ------AD 337
+E C + CG+ T+AL + H++ G YGQLG N Q ++
Sbjct: 803 GGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSN 862
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
+L + +EGK + IACG YH ++ +Y +G+ +G+LG GDT +R P +
Sbjct: 863 ARLIDELEGK----DIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPI 918
Query: 398 EALKDKQVKSIACGTNFTAAI 418
+ K+V +A G T +
Sbjct: 919 DDFVGKRVALVAAGFYHTVVL 939
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 164/343 (47%), Gaps = 34/343 (9%)
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+ EV+S G+ S G LGHG + + I AL I + G HT +T G ++T G
Sbjct: 561 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620
Query: 154 DGTYN-FGLLGHGN--EVSHW--VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
YN G G G VSH +PK +G + H + G HT +V++ G++ T G
Sbjct: 621 ---YNDNGQCGQGGTARVSHLSEIPKMDSGSSQA-HAYN---GCEHTILVSTDGRVATCG 673
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LGHG+ S S+P+ + SL+ +C +HT E GN + L
Sbjct: 674 YNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACED--GNLQN-------L 724
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+T+G D G+LGH D + +P V AL + VACG T+ +T SG + G Y
Sbjct: 725 YTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDY 784
Query: 329 GQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG + +L P +V G L + EI CG YH L S ++ +G+ G+LG G
Sbjct: 785 GQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGR 844
Query: 388 TDDRNSPS------------LVEALKDKQVKSIACGTNFTAAI 418
++ ++ + L++ L+ K + IACG T A+
Sbjct: 845 SNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 887
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 157/355 (44%), Gaps = 44/355 (12%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGV-KMDSSLPKALESAVVLDVQNIACGGRHAA 89
A G VF G GG RV + KMDS +A + G H
Sbjct: 612 ADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQA----------HAYNGCEHTI 661
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG-- 147
LV+ G V + G G+LGHG + PK+I +L N + LV+C YHT G
Sbjct: 662 LVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNL 721
Query: 148 -DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
+LYT+G Y G LGH + + +P+ V L + S++CG +HT VVT++G+ F
Sbjct: 722 QNLYTFGRNDY--GQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTASGKAFA 778
Query: 207 FGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
FG +G LG ++ P +V L+ + CG +HT A+ CS
Sbjct: 779 FGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL------------CSG 826
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPT------------CVAALVEPNFCRVACGHSLTVA 313
LF +G D G+LG G A + L + R+ACG T+A
Sbjct: 827 AHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIA 886
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLT 367
++ +G +Y G +GQLG ++ P ++ + K V +A G YH VLT
Sbjct: 887 VSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR-VALVAAGFYHTVVLT 940
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++++ G G LGHGD ++ + AL + ++ G+ TV LT G V+T G
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622
Query: 327 VYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQ G A + + S S G H ++++ V T G G+LGH
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 682
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G+T + P ++ +L++K V+ ++C T C
Sbjct: 683 GNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 716
>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
Length = 918
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 180/389 (46%), Gaps = 45/389 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +++ ++ + ++ GG A+V GE++ WG S G+LG G D P+L+ AL
Sbjct: 4 PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 63
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWG------DGTYNFGL-----LGHGNEVSHWVPK- 174
++ VAC + HT G Y WG G + + LG + + P+
Sbjct: 64 GKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 123
Query: 175 ----------RVNGPLEGIHVSSISCGPWHTAVVTSAGQ----LFTFGDGTFGVLGHGDR 220
RV L G ++ ++CGP+H+A + Q LFT G G G LGHGD
Sbjct: 124 LASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDE 183
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ +P V +L+ + ACG HTA V S+G L+TWG G+LG
Sbjct: 184 EDRHLPTAVHALENVNITAIACGAHHTACVT------------SAGTLYTWGGAAFGKLG 231
Query: 281 HGD-KEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTMGS-PVYGQLGNPQAD 337
G + ++L+P V+ L VA G + +TT G +YT G G ++D
Sbjct: 232 LGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGESD 291
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD-DRNSPSL 396
LP RVE L FV + CG H A + V+ WG + LGHGD + N P+
Sbjct: 292 EILPRRVEALLGL-FVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGDPEVPPNRPAC 348
Query: 397 VEALKDKQVKSIACGTNFTAAICLHKWVS 425
+ AL K V ++C + FT A C + VS
Sbjct: 349 LRALNGKGVVQLSCASTFTVAFCDPQRVS 377
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 165/345 (47%), Gaps = 65/345 (18%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++++WG + +G LG G R D+S+P+ +++ V+ +AC H
Sbjct: 32 GELYMWGANS-EGQLGTGDRR---------DASVPRLVKALHGKVVKAVACSQEHTVCCL 81
Query: 93 KQGEVFSWGEESGGRLG-HGVD------------------------SDVLHPKLIDALSN 127
G ++WG GRLG HG+ V P+++++L
Sbjct: 82 DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCG 141
Query: 128 MNIELVACGEYHTCAVTL----SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
I VACG YH+ + + L+T G G G LGHG+E +P V+ LE +
Sbjct: 142 YFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLN--GRLGHGDEEDRHLPTAVHA-LENV 198
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAAC 242
++++I+CG HTA VTSAG L+T+G FG LG G R S +P+ V
Sbjct: 199 NITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVS------------ 246
Query: 243 GVWHTAAVVEVMVGNSSSSNCSS-GKLFTWGDGDKGRLGH---GDKEAKLVPTCVAALVE 298
G AVV V +G+ S+ ++ G+L+TWG G RLGH G+ + +++P V AL+
Sbjct: 247 GPLRNKAVVSVALGSQHSACVTTDGELYTWGQGR--RLGHEVQGESD-EILPRRVEALLG 303
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
V CG + T + +G+V+ G+ G+P+ PNR
Sbjct: 304 LFVIHVVCGDAHTACIVENGNVWAWGTSRILGHGDPEVP---PNR 345
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 48 GGGLN-RVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGG 106
G GLN R+G G + D LP A+ + +++ IACG H A V G +++WG + G
Sbjct: 171 GLGLNGRLG--HGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 228
Query: 107 RLGHGVD--SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 164
+LG G S +L + L N + VA G H+ VT G+LYTWG G LGH
Sbjct: 229 KLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRR----LGH 284
Query: 165 --GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK- 221
E +P+RV L G+ V + CG HTA + G ++ + GT +LGHGD +
Sbjct: 285 EVQGESDEILPRRVEA-LLGLFVIHVVCGDAHTACIVENGNVWAW--GTSRILGHGDPEV 341
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAA 249
+ P + +L G V+ +C T A
Sbjct: 342 PPNRPACLRALNGKGVVQLSCASTFTVA 369
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 174/368 (47%), Gaps = 20/368 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + +V+++ CG RH V G V++ G G+LGH D P + AL
Sbjct: 9 PRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRKKPDQVGALD 66
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
I V+CGE HT A+ G +++WG + GL + + VP+ + L I +
Sbjct: 67 AQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIR--VPRNIKS-LYDIQI 123
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGV 244
++CG H+ ++ ++++G +G LG G + K S PR ++SL G+ A G
Sbjct: 124 VQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGG 183
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ A+ SG +F WG G+LG D+ + P + +L +
Sbjct: 184 GHSFALT------------MSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHI 231
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-V 363
CG T ALT G V+T G+ YGQLG+ + ++ R +L S V +IACG H +
Sbjct: 232 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTL 291
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
A + S +Y++G G NG+LG G T +R SP V+ + C+ +
Sbjct: 292 AFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLTHEDYVQRLPEANGCYCVKRI 351
Query: 424 VSGVDQSM 431
SG DQS
Sbjct: 352 YSGGDQSF 359
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 21/306 (6%)
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
VL P+ D N N+ V CG HT V G +YT G + G LGH S P +
Sbjct: 6 VLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCN--DLGQLGHDK--SRKKPDQ 61
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKG 234
V G L+ + ++SCG HT + GQ+F++G G +G + +PR ++SL
Sbjct: 62 V-GALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYD 120
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCV 293
++ V+ ACG H+ A+ S S+ +++WG G+LG G + K P +
Sbjct: 121 IQIVQVACGHHHSLAL-------SKESD-----IYSWGQNQYGQLGLGSEIKKESAPRHI 168
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSF 352
+L F +A G + ALT SG ++ G +GQLG N + D P ++ S+
Sbjct: 169 KSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKI 228
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ I CG H A LT + V+T+G G G+LGH T+ +P V L V IACG
Sbjct: 229 I-HICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGR 287
Query: 413 NFTAAI 418
T A
Sbjct: 288 QHTLAF 293
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG + GL+ V P+ ++S + + +ACG H+ ++
Sbjct: 87 GQVFSWGHAAHGQI---GLSVAEDYIRV------PRNIKSLYDIQIVQVACGHHHSLALS 137
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K+ +++SWG+ G+LG G + P+ I +L+ + +A G H+ A+T+SG ++
Sbjct: 138 KESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFG 197
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E P + L + I CG HTA +T G +FTFG G
Sbjct: 198 WGRN--KFGQLGLNDETDRSAPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT A V SSG+++++
Sbjct: 255 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYSF 303
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 304 GLGGNGQLGTGSTSNRKSPFTV 325
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 19/205 (9%)
Query: 25 GHDDGDALG---DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
GH AL D++ WG+ G LG G +K +S+ P+ ++S + +I
Sbjct: 129 GHHHSLALSKESDIYSWGQNQY-GQLGLGSE-------IKKESA-PRHIKSLAGIPFAHI 179
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A GG H+ + G +F WG G+LG ++D P L+ +L + I + CGE HT
Sbjct: 180 AAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTA 239
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTS 200
A+T G ++T+G G Y G LGH N +H V R L G V+ I+CG HT A V S
Sbjct: 240 ALTKEGGVFTFGAGGY--GQLGH-NSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPS 296
Query: 201 AGQLFTFGDGTFGVLGHG---DRKS 222
+G++++FG G G LG G +RKS
Sbjct: 297 SGRIYSFGLGGNGQLGTGSTSNRKS 321
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN 342
D+E L P + N V CG TV + G VYT G GQLG+ ++ K P+
Sbjct: 2 DEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK-PD 60
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR-NSPSLVEALK 401
+V G L + ++CG H L K +V++WG A+G++G +D P +++L
Sbjct: 61 QV-GALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLY 119
Query: 402 DKQVKSIACGTNFTAAI 418
D Q+ +ACG + + A+
Sbjct: 120 DIQIVQVACGHHHSLAL 136
>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
thaliana]
Length = 386
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 201/413 (48%), Gaps = 53/413 (12%)
Query: 20 SSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKM-DSSLPKALESAVVLDV 78
+ G D + V+ WG GT DG LG K+ D LP+ L + +
Sbjct: 2 AEHGETQADEEEEEQVWSWGAGT-DGQLGT----------TKLQDELLPQLLSLTSLPSI 50
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
+ACGG H + G+VF+WG S G+LGHG ++ PKL+ + I A G
Sbjct: 51 SMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWS 110
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H+ V+ SG ++T G+G+ FG LGHG+ +S P +V+ V ++CG H+ V+
Sbjct: 111 HSGFVSDSGCIFTCGNGS--FGQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVL 167
Query: 199 TSAGQLFTFGDGTFGVLGH-GDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+ Q+ FG G G LG DR KSV++P V LK + VR + H+AA+
Sbjct: 168 FAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI------ 221
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCRVACGHSLTVALT 315
+ G+ F+WG +G G D A +L P +F VA G + + LT
Sbjct: 222 ------SADGQFFSWG---RGFCGGPDVHAP------QSLPSPLSFREVAVGWNHALLLT 266
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK--SF----VEEIACGSYHVAVLTSK 369
G V+ +GS + Q P+ + E K F V +IA G+ H A +T
Sbjct: 267 VDGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTEN 323
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEA----LKDKQVKSIACGTNFTAAI 418
EV TWG G +G+LG G+T+D+ SP LV L+ K++K + CG+ FT A+
Sbjct: 324 GEVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 375
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 192/424 (45%), Gaps = 73/424 (17%)
Query: 23 GSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA 82
G DD G VF +G+ + + S F +K D L IA
Sbjct: 3 GEAEDDIPESGAVFTFGKSKF-------ADNIPSKFWLKNDIPL-------------RIA 42
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA 142
CG H AL+ + G++F +G + G+LG G V P + AL + ++LVACG HT
Sbjct: 43 CGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTLI 102
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-----GPLEGIHVSSISCGPWHTAV 197
T G +Y G + G LG G+ KR++ GP + ++ G +A
Sbjct: 103 CTAKGKVYASGGNSE--GQLGLGDCEERTSFKRLDFFDSQGP-----IKMLAAGSNTSAA 155
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T +G+LF +GD T G +G G VS P+EV + + V +CG +H+A V
Sbjct: 156 LTVSGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWV--SCGYYHSALVT------ 207
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G L+T+G+ D G+LG G + VP V ++ EP +VACG TVAL
Sbjct: 208 ------VDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEP-VRQVACGGGHTVAL- 259
Query: 316 TSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G+VYT G +GQLG+ + ++P VE K ++ CG H AV+T +Y
Sbjct: 260 AEGNVYTFGLGQFGQLGHGTFIFESRVPRLVE-HFKKGRACQVVCGENHTAVITEDGLLY 318
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
T+G G +G+LG G+ + N F +CL V +MC
Sbjct: 319 TFGDGRHGKLGLGEENFTN--------------------QFKPTLCLRFLKYNVQGAMCG 358
Query: 434 GCRL 437
GC +
Sbjct: 359 GCHM 362
>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
Length = 2434
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 191/425 (44%), Gaps = 53/425 (12%)
Query: 24 SGHDDGDALGDVFIWGEGTGD-GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNI 81
S GD+ F+ E GD V G N G G + +ES ++ I
Sbjct: 412 SSRASGDSTSSAFVGDEEEGDREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQI 471
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH----PKLID-ALSNMNIELVACG 136
G H + G+V + G G+ G G + V H PK+ D A+S ++ G
Sbjct: 472 GAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVH---AYNG 528
Query: 137 EYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
HT VT+ G T G YN+ G LGHGN S VPK V LE V +SC +HT
Sbjct: 529 CEHTILVTMDGRAATCG---YNYRGQLGHGNTASESVPKIVRS-LENRIVRLVSCSYYHT 584
Query: 196 AVVTS---AGQ--LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
+ +GQ L+TFG +G LGH D +P+ VE++ V ACG +HT V
Sbjct: 585 VMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVV 644
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHS 309
++GK F +G D G+LG E +LVP V A +E + C + CG+
Sbjct: 645 T------------ATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYY 692
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADG----------------KLPNRVEGKLSKSFV 353
T+ L + H++ G YGQLG +A+ +L +EGK F
Sbjct: 693 HTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRF- 751
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
ACG YH ++ +Y +G+ +G+LG GDT++R P ++ K+V +A G
Sbjct: 752 ---ACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFY 808
Query: 414 FTAAI 418
T +
Sbjct: 809 HTVVL 813
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 142/305 (46%), Gaps = 31/305 (10%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT--- 140
G H LV G + G G+LGHG + PK++ +L N + LV+C YHT
Sbjct: 528 GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMA 587
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
C SG Y + G ++G LGH + + VP+ V + HV S++CG +HT VVT+
Sbjct: 588 CEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEA-MGDQHVVSVACGQYHTMVVTA 646
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+ F FG +G LG ++ +P +V + L+ + CG +HT +
Sbjct: 647 TGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVL--------- 697
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC--------VAALVEP----NFCRVACG 307
CS LF +G D G+LG G A A L+E + R ACG
Sbjct: 698 ---CSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACG 754
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVL 366
TVA++ +G +Y G +GQLG + ++ P ++ + K V +A G YH VL
Sbjct: 755 CYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKR-VALVAAGFYHTVVL 813
Query: 367 TSKTE 371
T E
Sbjct: 814 TGGKE 818
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 31/268 (11%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNK-----QGEVFSWGEESGGRLGHGVDSDVLHP 119
S+PK + S V+ ++C H + + Q ++++G G+LGH D P
Sbjct: 561 SVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVP 620
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ ++A+ + ++ VACG+YHT VT +G + +G Y G LG + + VP +V
Sbjct: 621 QHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDY--GQLGIDSMENQLVPVQVRAG 678
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG------------DRKSVSIPR 227
LE I CG +HT V+ S LF FG +G LG G ++ S R
Sbjct: 679 LEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYAR 738
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
+E L+G VR ACG +HT AV + +G ++ +G + G+LG GD +
Sbjct: 739 LIEELEGKDIVRFACGCYHTVAVSD------------NGVMYVFGRNNHGQLGTGDTNER 786
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALT 315
+ P + V VA G TV LT
Sbjct: 787 VYPFPIDDFVGKRVALVAAGFYHTVVLT 814
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++++ G G LGHGD ++ + +L + ++ G+ T+ALT G V T G
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYN 493
Query: 327 VYGQLGNPQADGKLPNRVEG-KLSKSFVEEIAC--GSYHVAVLTSKTEVYTWGKGANGRL 383
GQ G ++ + E K+ + + ++ G H ++T T G G+L
Sbjct: 494 DNGQCGQ-GGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVTMDGRAATCGYNYRGQL 552
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
GHG+T + P +V +L+++ V+ ++C T C
Sbjct: 553 GHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMAC 588
>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 388
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/396 (32%), Positives = 196/396 (49%), Gaps = 49/396 (12%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT DG LG + D LP+ L + + +ACGG H +
Sbjct: 17 VWSWGAGT-DGQLGTAKLQ---------DELLPQLLSLTSLPSISMLACGGAHVIALTSD 66
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+VF+WG S G+LGHG ++ PKL+ I A G H+ V+ SG L+T G+
Sbjct: 67 GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGN 126
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G+ FG LGHG+ +S P +V+ V ++CG H+ V+ + Q+ FG G G
Sbjct: 127 GS--FGQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQ 183
Query: 215 LGHGD--RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG KSV++P V LK + R + H+AA+ + G+ F+WG
Sbjct: 184 LGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAI------------SADGQFFSWG 231
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G D + P C+ + + +F +VA G + + LT G V+ +G+ + Q
Sbjct: 232 ---RGFCAGPDVQ---TPQCLPSSL--SFRKVAVGWNHALLLTVDGEVFKLGNTLNKQ-- 281
Query: 333 NPQADGKLPNRVEGKLSK--SF----VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
P+ + E L+K F V +IA G+ H A +T +V TWG G +G+LG G
Sbjct: 282 -PEKQQLQIDSSEALLAKVSDFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLG 340
Query: 387 DTDDRNSPSLVEA----LKDKQVKSIACGTNFTAAI 418
+T+D+ SP LV L+ K++K + CG+ FT A+
Sbjct: 341 NTNDQTSPQLVSVGSIDLRTKEIK-VYCGSGFTYAV 375
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 135/305 (44%), Gaps = 27/305 (8%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVVEVMVGNSSSS 261
Q++++G GT G LG + +P ++ SL L ++ ACG H A+
Sbjct: 16 QVWSWGAGTDGQLGTAKLQDELLP-QLLSLTSLPSISMLACGGAHVIALT---------- 64
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S GK+FTWG G G+LGHGD +P V+ + A G S + ++ SG ++
Sbjct: 65 --SDGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLF 122
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
T G+ +GQLG+ + P +V S V+ +ACG H VL + +V +G G
Sbjct: 123 TCGNGSFGQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKR 181
Query: 381 GRLGHGD--TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG---- 434
G+LG T N P +V LKD +V I+ + +AAI + C+G
Sbjct: 182 GQLGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRGFCAGPDVQ 241
Query: 435 ---CRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKT 491
C LP + RK +N L+ K L ++ P K D+ L K
Sbjct: 242 TPQC-LPSSLSFRKVAVGWNHALLLTVDGEVFK-LGNTLNKQPEKQQLQIDSSEALLAKV 299
Query: 492 FDTDG 496
D DG
Sbjct: 300 SDFDG 304
>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
Length = 1080
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
++SS P+ +++ ++ ++A GG A+V++ GE++ WG S G+LG G D P++
Sbjct: 97 LESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRV 156
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-- 179
+ AL +++VAC + HT G Y WG N L HG + V+ P
Sbjct: 157 VKALQGKIVKVVACAQEHTVCCLDDGSAYAWGC-ALNGRLGLHGLSIPSSAGLGVSAPPG 215
Query: 180 -------------------------LEGIHVSSISCGPWHTAVVTSAGQ----LFTFGDG 210
L G ++ ++CG +HTA + Q LFT G G
Sbjct: 216 APTKGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLG 275
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGHGD + +P V +L+ L ACG HTA V S G L+
Sbjct: 276 LNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVT------------SGGTLYM 323
Query: 271 WGDGDKGRLGHGD-KEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTMGS-PV 327
WG G+LG G + ++L+P V L VA G + +TT G +YT G
Sbjct: 324 WGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGRR 383
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G ++D LP RVE L FV + CG H A + V+ WG + LGHGD
Sbjct: 384 LGHEVQGESDEFLPRRVE-ALVGLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGD 440
Query: 388 TD-DRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
+ N PS + AL K V ++C FTAA C + VS
Sbjct: 441 LEAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCDPQRVS 479
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 169/378 (44%), Gaps = 67/378 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++++WG + +G LG G R D+S+P+ +++ V+ +AC H
Sbjct: 130 GELYMWGCNS-EGQLGTGDRR---------DASVPRVVKALQGKIVKVVACAQEHTVCCL 179
Query: 93 KQGEVFSWGEESGGRLG-HGVDSD----------------------------VLHPKLID 123
G ++WG GRLG HG+ V P++++
Sbjct: 180 DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPTKGARTEPLASACLVCTPRVLE 239
Query: 124 ALSNMNIELVACGEYHTCAVTL----SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+L I VACG YHT + + L+T G G G LGHG+E +P V+
Sbjct: 240 SLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLN--GRLGHGDEEDRHLPTPVHA- 296
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREV-ESLKGLRT 237
LE +++++I+CG HTA VTS G L+ +G FG LG G R S +P+ V L+
Sbjct: 297 LENLNITAIACGAHHTACVTSGGTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTV 356
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH---GDKEAKLVPTCVA 294
V A G H+A V + G+L+TWG G RLGH G+ + + +P V
Sbjct: 357 VSVALGSQHSACVT------------TDGELYTWGQGR--RLGHEVQGESD-EFLPRRVE 401
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE 354
ALV V CG + T + +G+V+ G+ G+ +A P+ + LS V
Sbjct: 402 ALVGLFVIHVVCGDAHTACIVENGNVWAWGTSRILGHGDLEAPPNRPSCLR-ALSGKGVV 460
Query: 355 EIACGSYHVAVLTSKTEV 372
+++C A V
Sbjct: 461 QLSCAPTFTAAFCDPQRV 478
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 168/350 (48%), Gaps = 31/350 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ ++ L ++ I C R ++ + G+VF SD P+ + AL
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF----------MYYSSDTQCPQEMTALD 511
Query: 127 NMNIELVACGEY--HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ + +A H A+T ++Y+WG+G + G LGHG+ + P + L+G
Sbjct: 512 DKEVIKIAAHPEGKHYLALTKDYEVYSWGNG--DGGRLGHGDTSTKEEPTLIQA-LKGKD 568
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ + CG ++A +++ G L+T+G G +G LGHG + P + +L ++ ACG
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGS 628
Query: 245 W--HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
+ HT + S GK+++WGDGD G+LG G + +P + L
Sbjct: 629 FYAHTLCIT------------SQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIV 676
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSY 361
+V CG +VAL+ GHVYT G +LG+P + + P VE L V ++ G
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGVS 735
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
HV LT + EVY WGK N ++ P L+EALK ++V + CG
Sbjct: 736 HVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 21/280 (7%)
Query: 51 LNRVGSCFGVKM--DSSLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGG 106
L + G F + D+ P+ + + +V IA G+H + K EV+SWG GG
Sbjct: 486 LTQTGKVFFMYYSSDTQCPQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGG 545
Query: 107 RLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
RLGHG S P LI AL +I V CG ++ A++ +G LYTWG G N+G LGHG
Sbjct: 546 RLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRG--NYGRLGHGT 603
Query: 167 EVSHWVPKRVNGPLEGIHVSSISCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
P ++ L H+ ++CG + HT +TS G+++++GDG +G LG G
Sbjct: 604 AEDCLTPTMISA-LSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSK 662
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
+PR +E L+ ++ V+ CG + A+ E G ++TWG G+ +LGH +
Sbjct: 663 LPRLIEKLQNVKIVQVYCGAQFSVALSE------------DGHVYTWGKGEGWKLGHPTE 710
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
E P V L + V+ G S +ALT G VY G
Sbjct: 711 ENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWG 750
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 165/328 (50%), Gaps = 35/328 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+ D LS + I+ + C + +T +G ++ + + ++ P+ +
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVF----------FMYYSSDTQ--CPQEMTA 509
Query: 179 PLEGIHVSSISCGPW--HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L+ V I+ P H +T +++++G+G G LGHGD + P +++LKG
Sbjct: 510 -LDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKD 568
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ CG G S++ ++G L+TWG G+ GRLGHG E L PT ++AL
Sbjct: 569 IIDVECG------------GTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISAL 616
Query: 297 VEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFV 353
+ + +VACG ++ T+ +T+ G VY+ G YG+LG +DG KLP +E KL +
Sbjct: 617 SDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-KLQNVKI 675
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
++ CG+ L+ VYTWGKG +LGH ++ P +VE L+D++V ++ G +
Sbjct: 676 VQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVS 735
Query: 414 FTAAIC----LHKWVSGVDQSMCSGCRL 437
A+ ++ W ++ +C L
Sbjct: 736 HVLALTDQGEVYGWGKNENKQICDSSEL 763
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 140/284 (49%), Gaps = 27/284 (9%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V+ WG G G G LG G K + +L +AL+ ++DV+ CGG ++A ++
Sbjct: 535 EVYSWGNGDG-GRLGHGDT------STKEEPTLIQALKGKDIIDVE---CGGTYSAAISA 584
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY--HTCAVTLSGDLYT 151
G +++WG + GRLGHG D L P +I ALS+ +I VACG + HT +T G +Y+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYS 644
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WGDG Y G LG G +P+ + L+ + + + CG + ++ G ++T+G G
Sbjct: 645 WGDGDY--GKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGE 701
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LGH ++V P VE L+ + V + GV H A+ + G+++ W
Sbjct: 702 GWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD------------QGEVYGW 749
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G + ++ + P + AL V CG + + A T
Sbjct: 750 GKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCGPAQSFAWT 793
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 172/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIVHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL+ + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
+G V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +V G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 171/358 (47%), Gaps = 37/358 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+ +G V GLN G G + + + P+ + + + ++ACG H+ ++ +
Sbjct: 47 VFLLEDGE---VYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIVHVACGESHSLALSDR 102
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++FSWG S G+LG D V P+LI L+ I V+CG +H A+ G +TWG
Sbjct: 103 GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWG 162
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G
Sbjct: 163 KNSH--GQLGLGKEFPSQASPQRVRS-LEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNA 219
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D K P V+ L+ + V +CG HTA + + +G +FT+G
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------NGGVFTFG 267
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G GQL
Sbjct: 268 AGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQL 327
Query: 332 GNPQA-DGKLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G + K P+ V+G + V++I G VL SK E Y+
Sbjct: 328 GTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYS 385
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + + GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVTAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T +G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 177/381 (46%), Gaps = 45/381 (11%)
Query: 63 DSSLPKALESAVVL---DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
D++ K+ E L ++ I G H ++ G+VF+ G G+ G G + V H
Sbjct: 390 DTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHL 449
Query: 120 KLIDALSNMNIELVAC-GEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
I + + + + A G HT V+ G + T G YN+ G LGHGN S VPK +
Sbjct: 450 SEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCG---YNYRGQLGHGNTTSESVPKIIR 506
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQL---FTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
LE V +SC +HT + G L +TFG +G LGH D IP+ VE+L
Sbjct: 507 S-LENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSD 565
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
+ V ACG +HT V SGK F +G D G+LG E +L P V
Sbjct: 566 QQIVSVACGQYHTMVVT------------VSGKAFAFGKNDYGQLGIDTMENQLAPVQVR 613
Query: 295 ALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG----------NPQ------AD 337
+E C + CG+ T+AL + H++ G YGQLG N Q ++
Sbjct: 614 GGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSN 673
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
+L + +EGK + IACG YH ++ +Y +G+ +G+LG GDT +R P +
Sbjct: 674 ARLIDELEGK----DIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPI 729
Query: 398 EALKDKQVKSIACGTNFTAAI 418
+ K++ +A G T +
Sbjct: 730 DDFVGKRIALVAAGFYHTVVL 750
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 164/343 (47%), Gaps = 34/343 (9%)
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+ EV+S G+ S G LGHG + + I AL I + G HT +T G ++T G
Sbjct: 372 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431
Query: 154 DGTYN-FGLLGHGN--EVSHW--VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
YN G G G VSH +PK +G + H + G HT +V++ G++ T G
Sbjct: 432 ---YNDNGQCGQGGTARVSHLSEIPKMDSGSSQA-HAYN---GCEHTILVSTDGRVATCG 484
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LGHG+ S S+P+ + SL+ +C +HT E GN + L
Sbjct: 485 YNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACED--GNLQN-------L 535
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+T+G D G+LGH D + +P V AL + VACG T+ +T SG + G Y
Sbjct: 536 YTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDY 595
Query: 329 GQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG + +L P +V G L + EI CG YH L S ++ +G+ G+LG G
Sbjct: 596 GQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGR 655
Query: 388 TDDRNSPS------------LVEALKDKQVKSIACGTNFTAAI 418
++ ++ + L++ L+ K + IACG T A+
Sbjct: 656 SNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 698
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 140/305 (45%), Gaps = 33/305 (10%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G H LV+ G V + G G+LGHG + PK+I +L N + LV+C YHT
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526
Query: 144 TLSG---DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
G +LYT+G Y G LGH + + +P+ V L + S++CG +HT VVT
Sbjct: 527 CEDGNLQNLYTFGRNDY--GQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTV 583
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+G+ F FG +G LG ++ P +V L+ + CG +HT A+
Sbjct: 584 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIAL--------- 634
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT------------CVAALVEPNFCRVACG 307
CS LF +G D G+LG G A + L + R+ACG
Sbjct: 635 ---CSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACG 691
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVL 366
T+A++ +G +Y G +GQLG ++ P ++ + K + +A G YH VL
Sbjct: 692 CYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR-IALVAAGFYHTVVL 750
Query: 367 TSKTE 371
T E
Sbjct: 751 TGGKE 755
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+D +P+ +E+ + ++ACG H +V G+ F++G+ G+LG + L P
Sbjct: 552 IDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQ 611
Query: 122 IDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN---------EVSHW 171
+ L + CG YHT A+ L+ +G Y LG N + +
Sbjct: 612 VRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRF 671
Query: 172 VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
R+ LEG + I+CG +HT V+ G ++ FG G LG GD P ++
Sbjct: 672 SNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDD 731
Query: 232 LKGLRTVRAACGVWHTAAV 250
G R A G +HT +
Sbjct: 732 FVGKRIALVAAGFYHTVVL 750
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++++ G G LGHGD ++ + AL + ++ G+ TV LT G V+T G
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433
Query: 327 VYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQ G A + + S S G H ++++ V T G G+LGH
Sbjct: 434 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGH 493
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G+T + P ++ +L++K V+ ++C T C
Sbjct: 494 GNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 527
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
D+ IACG H V+ G ++ +G + G+LG G ++ ++P ID I LVA G
Sbjct: 684 DIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAG 743
Query: 137 EYHTCAVT 144
YHT +T
Sbjct: 744 FYHTVVLT 751
>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
Length = 1196
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 144/289 (49%), Gaps = 31/289 (10%)
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
G +T+G G G LGHG+++ P ++ L AC AAV+
Sbjct: 928 GDAYTWGQGASGSLGHGNQEDKKEPLVMKDFLYLDVSMVACENSAGAAVM---------- 977
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT-SGHV 320
+G+LFTWG G+KGRLGH + + +P ++A G + + +T G V
Sbjct: 978 --FTGELFTWGKGEKGRLGH--ETFRNMPVK----------QIAAGSAHSGCITEGDGAV 1023
Query: 321 YTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
Y GS +YGQ+GN L P RV K K +++ CG HV VL VY WG G
Sbjct: 1024 YMWGSGIYGQIGNNTNTHALTPMRV--KFGKLKAKQLVCGVNHVLVLMEDGSVYGWGAGT 1081
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPF 439
GRLG+G+ D+ P + DK V+ + G + +AA+C H+WV D C C+ F
Sbjct: 1082 YGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAVCAHQWVPDKDADDCMSCKSKF 1141
Query: 440 NNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
F R+RH+C CG +FC SC+ K+ ++P RVCDNC+ L
Sbjct: 1142 -TFLRRRHHCRYCGGIFCGSCTGKRITLLRFG--FDEPVRVCDNCYQIL 1187
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 27/201 (13%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ +GD + WG+G G LG G + D P ++ + LDV +AC A
Sbjct: 925 ERIGDAYTWGQG-ASGSLG---------HGNQEDKKEPLVMKDFLYLDVSMVACENSAGA 974
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT-CAVTLSGD 148
V GE+F+WG+ GRLGH + NM ++ +A G H+ C G
Sbjct: 975 AVMFTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEGDGA 1022
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+Y WG G Y G +G+ P RV + + CG H V+ G ++ +G
Sbjct: 1023 VYMWGSGIY--GQIGNNTNTHALTPMRVK--FGKLKAKQLVCGVNHVLVLMEDGSVYGWG 1078
Query: 209 DGTFGVLGHGDRKSVSIPREV 229
GT+G LG+G+ +P +
Sbjct: 1079 AGTYGRLGNGNESDQRVPVRI 1099
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 31/249 (12%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK +V D++N + + G+ ++WG+ + G LGHG D P ++
Sbjct: 902 PKFAPITIVHDMENEK--QKFKEQFERIGDAYTWGQGASGSLGHGNQEDKKEPLVMKDFL 959
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+++ +VAC AV +G+L+TWG G G LGH + V
Sbjct: 960 YLDVSMVACENSAGAAVMFTGELFTWGKGEK--GRLGHET-------------FRNMPVK 1004
Query: 187 SISCGPWHTAVVTSA-GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
I+ G H+ +T G ++ +G G +G +G+ P V+ K L+ + CGV
Sbjct: 1005 QIAAGSAHSGCITEGDGAVYMWGSGIYGQIGNNTNTHALTPMRVKFGK-LKAKQLVCGVN 1063
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H ++E G ++ WG G GRLG+G++ + VP + + N +
Sbjct: 1064 HVLVLME------------DGSVYGWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRGLG 1111
Query: 306 CGHSLTVAL 314
G S + A+
Sbjct: 1112 AGGSSSAAV 1120
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 182/363 (50%), Gaps = 30/363 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH + + G V++ G G+LGH + P+ + +L NI V+CGE
Sbjct: 36 VRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGH--EKARKKPEQVVSLDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
HT A+ G ++ WG DG ++ E VP+ V L +H++ ++CG WH
Sbjct: 94 AHTLALNDKGQVFAWGLGSDGQLGLSIV----EDCLRVPRTVKS-LSEVHITQVACGYWH 148
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+ + G++F++G +G LG G + + V P+ ++SL+G+ + + G H+ +
Sbjct: 149 SLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLT-- 206
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SG +F WG G+LG GD + + P + L + CG T A
Sbjct: 207 ----------LSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAA 256
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEV 372
LT G V+T G+ YGQLG+ + ++ R +L S V +IACG H +A + S ++
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKI 316
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVE----ALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
++G G NG+LG T +R SP+ V+ A D V+ C + + C+ + +G D
Sbjct: 317 DSFGLGGNGQLGTRSTCNRISPTPVKGCWRAHADPCVE--LCISEAERSYCVKRIYAGGD 374
Query: 429 QSM 431
QS
Sbjct: 375 QSF 377
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 157/326 (48%), Gaps = 21/326 (6%)
Query: 97 VFSWGEESGGRLGHG-VDSDVL-HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D +VL P+ + + V CG HT + G +YT
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LGH E + P++V L+ ++ ++SCG HT + GQ+F +G G+ G
Sbjct: 59 GCNDLGQLGH--EKARKKPEQVVS-LDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQ 115
Query: 215 LGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG + + +PR V+SL + + ACG WH+ A+ G++F+WG
Sbjct: 116 LGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR------------GGEIFSWGQ 163
Query: 274 GDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + A + P + +L F +++ G + + LT SG ++ G +GQLG
Sbjct: 164 NKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLG 223
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D + + L V I CG H A LT + V+T+G G G+LGH T+
Sbjct: 224 LGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V IACG T A
Sbjct: 284 NPRKVFELMGSVVSQIACGRQHTLAF 309
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 145/285 (50%), Gaps = 20/285 (7%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLID 123
K E V LD QNI +CG H +N +G+VF+WG S G+LG + D L P+ +
Sbjct: 73 KKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+LS ++I VACG +H+ A+ G++++WG Y G LG G + + +V L+GI
Sbjct: 133 SLSEVHITQVACGYWHSLALARGGEIFSWGQNKY--GQLGLGQQGACVCSPQVIQSLQGI 190
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
IS G H+ +T +G +F +G FG LG GD P +++L+ + V CG
Sbjct: 191 PFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCG 250
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HTAA+ + G +FT+G G G+LGH ++ P V L+ +
Sbjct: 251 EDHTAALTK------------EGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQ 298
Query: 304 VACGHSLTVALT-TSGHVYTMGSPVYGQLGNPQADGKL-PNRVEG 346
+ACG T+A +SG + + G GQLG ++ P V+G
Sbjct: 299 IACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVKG 343
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 129/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ DG LG L+ V C V P+ ++S + + +ACG H+ +
Sbjct: 103 GQVFAWGLGS-DGQLG--LSIVEDCLRV------PRTVKSLSEVHITQVACGYWHSLALA 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ GE+FSWG+ G+LG G + V P++I +L + ++ G H+ +TLSG ++
Sbjct: 154 RGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG G+ P + L V I CG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLGDNDDRRFPVLLK-TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT A + SSGK+ ++
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIP-----------SSGKIDSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG ++ PT V
Sbjct: 320 GLGGNGQLGTRSTCNRISPTPV 341
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 24/242 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ + GL + G+C P+ ++S + I+ GG H+ +
Sbjct: 156 GEIFSWGQNKYGQL---GLGQQGACV------CSPQVIQSLQGIPFGQISAGGAHSFGLT 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G +F WG G+LG G + D P L+ L + + + CGE HT A+T G ++T+
Sbjct: 207 LSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G Y G LGH N +H V R L G VS I+CG HT A + S+G++ +FG G
Sbjct: 267 GAGGY--GQLGH-NSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGG 323
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG + P V+ C H VE+ + + S C +++
Sbjct: 324 NGQLGTRSTCNRISPTPVK----------GCWRAHADPCVELCISEAERSYCVK-RIYAG 372
Query: 272 GD 273
GD
Sbjct: 373 GD 374
>gi|294460555|gb|ADE75853.1| unknown [Picea sitchensis]
Length = 147
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/123 (67%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
Query: 536 MESFKQSEGRSKRNK--KLEFNSSRVSPIPNGSSQWGALNISKSFNPMFGSSKKFFSASV 593
MES +Q E RS + KLEF+SSRVSP+PNG+SQWG+ NI +S P+FGSSKK FSASV
Sbjct: 1 MESSEQIESRSSSRRNRKLEFHSSRVSPVPNGNSQWGSTNIRRSVTPIFGSSKKIFSASV 60
Query: 594 PGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
PGSRIVS A SPISRRPSP RS T TPTL GLTS K++VDDAK+ ND+L+QEV+ L QV
Sbjct: 61 PGSRIVSLAISPISRRPSPRRSATSTPTLSGLTSLKLLVDDAKKANDTLNQEVVNLNVQV 120
Query: 654 FAF 656
F
Sbjct: 121 HMF 123
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 160/322 (49%), Gaps = 24/322 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
HT + G +Y WG DG GL G E VP+ + L + + ++CG +H
Sbjct: 94 AHTLTLNDKGQVYAWGFAADG--QLGL--PGTEEYTRVPRNIKS-LSDVQIVQVACGYYH 148
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+ ++ ++F++G G LG G D K + P+ ++SL G+ + A G H+ A+
Sbjct: 149 SLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-- 206
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SG +F WG G+LG D+ + VP + +L ++CG T A
Sbjct: 207 ----------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EV 372
LT G V+T G+ YGQLG+ ++ R +L + V +IACG H + T +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316
Query: 373 YTWGKGANGRLGHGDTDDRNSP 394
Y++G G NG+LG G T +R SP
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSP 338
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D +V L P+ + N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V G L+ ++ ++SCG HT + GQ++ +G G
Sbjct: 60 -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F ++A G + + ALT SG V+ G +GQLG
Sbjct: 164 NKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I+CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGNIVTQIACGRQHTSAFV 310
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 149/303 (49%), Gaps = 26/303 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG + G+LG G + P+ I +LS++ I VACG YH+ A++ +++
Sbjct: 100 NDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG + G LG G ++ ++ L GI I+ G H+ +T +G +F +G
Sbjct: 160 SWGQNKH--GQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V +CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS-GHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A S G +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNG 325
Query: 330 QLG 332
QLG
Sbjct: 326 QLG 328
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG DG LG G + + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG-FAADGQLG--------LPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G D P+LI +L + +A G H+ A+TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + ISCG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V S+G+++++
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFPV 341
>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6-like [Ailuropoda melanoleuca]
Length = 1189
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 176/350 (50%), Gaps = 30/350 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVAC 135
+++ A G RH+ L+ GE+ S G+ S G+LG GV D HPK I L N+ ++LV+C
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDE-HPKRIRTLDNLRVDLVSC 82
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ H+ AV G ++ WG G+ +G E+ + +P ++ L GI + +SCG +H+
Sbjct: 83 GKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI-NLIPTKIKT-LTGIKIIQVSCGHYHS 140
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
++ GQ+F++G + G LG G S + P+ V SL G+ + A G H+ A+
Sbjct: 141 LALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFAL---- 196
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLT 311
SG F WG + G+L + P + AL ++CG+ T
Sbjct: 197 --------SLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHT 248
Query: 312 VALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSK 369
LT +G V+T G YGQLG+ P A+ + P VEG V +I CGSYH +A + +
Sbjct: 249 AVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTT 306
Query: 370 TEVYTWGKGANGR------LGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+V ++G+G + + + D SP L D QVK I GT+
Sbjct: 307 GKVVSFGRGPSCKSSPTHPKALTENVDFTSPISANDLVDFQVKHIFAGTH 356
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 21/289 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + +G+L++ GD + G LG PKR+ L+ + V +SCG
Sbjct: 29 ASGERHSLLLLSNGELHSCGDNSQ--GQLGRKGVQRDEHPKRIRT-LDNLRVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K ++ IP ++++L G++ ++ +CG +H+ A+ E
Sbjct: 86 HSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSE 145
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
G++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 146 ------------GGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPN---RVEGKLSKSFVEEIACGSYHVAVLTS 368
AL+ SG + GS GQL Q + + + R G L V I+CG H AVLT
Sbjct: 194 FALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQ 253
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G + G+LGH T ++ P LVE + D V I CG+ T A
Sbjct: 254 TGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGI-DGLVSQIDCGSYHTLA 301
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 138/275 (50%), Gaps = 29/275 (10%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-L 117
GV+ D PK + + L V ++CG H+ V +G VF+WG S G+LG G ++ L
Sbjct: 59 GVQRDEH-PKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINL 117
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRV 176
P I L+ + I V+CG YH+ A++ G +++WG ++ G LG G E S P+RV
Sbjct: 118 IPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSH--GQLGLGKECPSQASPQRV 175
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI----PREVESL 232
L+GI ++ ++ G H+ ++ +G F +G G L + +V + PR + +L
Sbjct: 176 RS-LDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLAL-RQNNVPVQSHKPRSIGAL 233
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
K L + +CG HTA + + +GK+FT+G G+LGH K P
Sbjct: 234 KNLGVIYISCGYEHTAVLTQ------------TGKVFTFGGNSYGQLGHSPTAEKEGPQL 281
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
V ++ ++ CG T+A +VYT G V
Sbjct: 282 VEG-IDGLVSQIDCGSYHTLA-----YVYTTGKVV 310
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 130/274 (47%), Gaps = 27/274 (9%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
+ +D RV L S S + G VF WG G+ +G LG G K
Sbjct: 68 RIRTLDNLRVDLVSCGKEHSLAVCYK-----GRVFAWGAGS-EGQLGVG--------EFK 113
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPK 120
+ +P +++ + + ++CG H+ +++ G+VFSWG S G+LG G + P+
Sbjct: 114 EINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQ 173
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+ +L + + VA G H+ A++LSG + WG L N R G L
Sbjct: 174 RVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGAL 233
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ + V ISCG HTAV+T G++FTFG ++G LGH P+ VE + GL + +
Sbjct: 234 KNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGLVS-QI 292
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
CG +HT A V ++GK+ ++G G
Sbjct: 293 DCGSYHTLAYV-----------YTTGKVVSFGRG 315
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 172/324 (53%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + + P+ I AL++ +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGHEREGN--KPEQIGALADQHIIHVACGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL + V+ VP+ + L + +SCG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVA--VPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ FT+G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG + G+LG D++ + P V L ++CG T LT
Sbjct: 206 -------SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
+G V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G GA G+LG G T + PS V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+ G + V P++ +S+ +++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGL 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
T G LGH E + P+++ G L H+ ++CG H+ ++ GQLF++G G+ G
Sbjct: 61 NTK--GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 215 LGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG + SV++PR ++ L ++ +CG WH A+ + G+ FTWG
Sbjct: 116 LGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLAL------------AADGQFFTWGK 163
Query: 274 GDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + ++ P V +L +VA G + + AL+ SG V+ G GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + D + P V+ L V I+CG H AVLT V+T+G G+ G+LGH +D
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L +V IACG T A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAF 309
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 167/350 (47%), Gaps = 34/350 (9%)
Query: 43 GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE 102
G V GLN G G + + + P+ + + + ++ACG H+ ++ +G++FSWG
Sbjct: 52 GGEVYTCGLNTKGQ-LGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGA 110
Query: 103 ESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGL 161
S G+LG D V P+LI L+ I V+CG +H A+ G +TWG ++ G
Sbjct: 111 GSDGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSH--GQ 168
Query: 162 LGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LG G E S P+RV LEGI ++ ++ G H+ ++ +G +F +G G LG D
Sbjct: 169 LGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDE 227
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
K P V+ L+ + V +CG HTA + + +G +FT+G G G+LG
Sbjct: 228 KDRESPCHVKLLRTQKVVYISCGEEHTAVLTK------------NGGVFTFGAGSCGQLG 275
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGNPQA-DG 338
H ++ P V L+ ++ACG T+A +SG +Y G GQLG +
Sbjct: 276 HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 335
Query: 339 KLPNRVEG--------------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
K P+ V+G + V++I G VL SK E Y+
Sbjct: 336 KCPSPVKGYWAAHSGQLSARPDRFKYHIVKQIFSGGDQTFVLCSKYENYS 385
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + ++LE + + +A GG H+ ++
Sbjct: 156 GQFFTWGKNS-HGQLG-----LGKEFPSQASPQRVRSLEG---IPLAQVAAGGAHSFALS 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG + G+LG + D P + L + ++CGE HT +T +G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G V+ I+CG HT A V S+G ++ FG G
Sbjct: 267 GAGS--CGQLGHDSMNDEVNPRRV-LELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G +V P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 160/322 (49%), Gaps = 24/322 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
HT + G +Y WG DG GL G E VP+ + L + + ++CG +H
Sbjct: 94 AHTLTLNDKGQVYAWGFAADG--QLGL--PGTEEYTRVPRNIKS-LSDVQIVQVACGYYH 148
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+ ++ ++F++G G LG G D K + P+ ++SL G+ + A G H+ A+
Sbjct: 149 SLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-- 206
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SG +F WG G+LG D+ + VP + +L ++CG T A
Sbjct: 207 ----------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EV 372
LT G V+T G+ YGQLG+ ++ R +L + V +IACG H + T +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316
Query: 373 YTWGKGANGRLGHGDTDDRNSP 394
Y++G G NG+LG G T +R SP
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSP 338
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 167/328 (50%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D +V L P+ + N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P++V G L+ ++ ++SCG HT + GQ++ +G G
Sbjct: 60 -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115
Query: 215 LGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + +PR ++SL ++ V+ ACG +H+ A+ ++F+WG
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL------------SKGSEVFSWGQ 163
Query: 274 GDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G D + + P + +L+ F ++A G + + ALT SG V+ G +GQLG
Sbjct: 164 NKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N + D +PN ++ S+ V I+CG H A LT + V+T+G G G+LGH T
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
+P V L V IACG T+A
Sbjct: 283 INPRKVFELMGNIVTQIACGRQHTSAFV 310
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 149/303 (49%), Gaps = 26/303 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI---ACGGRHAALV 91
VF+ +GT V G N +G G + P E LD QNI +CG H +
Sbjct: 47 VFVLDDGT---VYTCGCNDLGQ-LGHEKSRKRP---EQVGALDAQNIVAVSCGEAHTLTL 99
Query: 92 NKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N +G+V++WG + G+LG G + P+ I +LS++ I VACG YH+ A++ +++
Sbjct: 100 NDKGQVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVF 159
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG + G LG G ++ ++ L GI I+ G H+ +T +G +F +G
Sbjct: 160 SWGQNKH--GQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRN 217
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG D +P ++SL+ + V +CG HTAA+ + G +FT
Sbjct: 218 KFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTK------------EGGVFT 265
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS-GHVYTMGSPVYG 329
+G G G+LGH ++ P V L+ ++ACG T A S G +Y+ G G
Sbjct: 266 FGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNG 325
Query: 330 QLG 332
QLG
Sbjct: 326 QLG 328
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 130/262 (49%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG DG LG G + + +P+ ++S + + +ACG H+ ++
Sbjct: 103 GQVYAWG-FAADGQLG--------LPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G D P+LI +L + +A G H+ A+TLSG ++
Sbjct: 154 KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + ISCG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V S+G+++++
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFPV 341
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 173/365 (47%), Gaps = 25/365 (6%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
F WG +G LG G+ G + + K + + VQ+I+CG H +V G
Sbjct: 4 FCWGSSM-EGQLGIGIT------GGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDG 56
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
++ G S G+LG D + P + AL + I+ VACG+ HT AV+ G + WG
Sbjct: 57 TLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRN 114
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
L G+ + P R+ L + CG H+ +T G+LF++GD T+G L
Sbjct: 115 DRGQCGLATGDIENKPRP-RILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQL 173
Query: 216 GHGDRKS--VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
G G + P E+ SL+G+ VR ACG +H+ A+ SG +F WG
Sbjct: 174 GIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALT------------ISGSVFGWGK 221
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
D G+LG G+KE K PT + + +ACG T LT G V+ G GQLG+
Sbjct: 222 NDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 281
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTEVYTWGKGANGRLGHGDTDDRN 392
++ R L S + ++ CG +H VL SK +Y +G+G +G+LG + +
Sbjct: 282 GSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCS 341
Query: 393 SPSLV 397
+P V
Sbjct: 342 NPQRV 346
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 154/328 (46%), Gaps = 24/328 (7%)
Query: 98 FSWGEESGGRLGHGV---DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
F WG G+LG G+ + K + LS ++ ++CG++HT V G LY G
Sbjct: 4 FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LG + + + P +V+ LE + + ++CG HT V+ GQ+ +G G
Sbjct: 64 NSK--GQLGQ--DRNQYKPVQVSA-LETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118
Query: 215 --LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
L GD ++ PR ++ L + V+ CG H+ A+ G+LF+WG
Sbjct: 119 CGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTR------------DGRLFSWG 166
Query: 273 DGDKGRLGHGDKEAKLV--PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
D G+LG G PT + +L RVACG + ALT SG V+ G GQ
Sbjct: 167 DNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQ 226
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
LG + K + + V+ IACG H A+LT+ V+ +G+G+ G+LGHG +
Sbjct: 227 LGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYN 286
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L + + CG + T +
Sbjct: 287 EVNPRKVIDLMGSDITQVTCGKHHTLVL 314
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 144/283 (50%), Gaps = 22/283 (7%)
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR--LGHGVDSDVLHPKLIDALS 126
ALE+ V+ +++ACG H V+ +G+V WG G+ L G + P+++ L+
Sbjct: 83 ALETVVI---KHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLA 139
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIHV 185
+ V CG H+ A+T G L++WGD TY G LG G V+++ + L G+ +
Sbjct: 140 SYQFVKVCCGSLHSMALTRDGRLFSWGDNTY--GQLGIGTLVTNYTDRPTELTSLRGVPL 197
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++CG +H+ +T +G +F +G G LG G++++ + P + +++ ACG
Sbjct: 198 VRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQD 257
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
HTA + + G +F +G G +G+LGHG ++ P V L+ + +V
Sbjct: 258 HTAMLT------------ADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVT 305
Query: 306 CGHSLTVALTTS-GHVYTMGSPVYGQLGNPQADG-KLPNRVEG 346
CG T+ L S G +Y G ++GQLG +A P RV G
Sbjct: 306 CGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPG 348
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 22/282 (7%)
Query: 70 LESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR--LGHGVDSDVLHPKLIDALSN 127
LE+ V+ +++ACG H V+ + +V WG G+ L G + P+++ L++
Sbjct: 424 LETVVI---KHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLAS 480
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIHVS 186
V CG H+ A+T G L++WGD TY G LG G V+++ + L G+ +
Sbjct: 481 YQFVKVCCGSLHSMALTRDGRLFSWGDNTY--GQLGIGTLVTNYTDRPTELTSLRGVPLV 538
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++CG +H+ +T +G +F +G G LG G++++ S P + +++ ACG H
Sbjct: 539 RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDH 598
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + G +F +G G +G+LGHG ++ P V L+ + +V C
Sbjct: 599 TAMLT------------ADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTC 646
Query: 307 GHSLTVALTTS-GHVYTMGSPVYGQLGNPQADG-KLPNRVEG 346
G T+ L S G +Y G ++GQLG +A P RV G
Sbjct: 647 GKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPG 688
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 133/276 (48%), Gaps = 16/276 (5%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L + I+ VACG+ HT AV+ + WG L G+ + P R+ L
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRP-RILRHLASYQ 482
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS--VSIPREVESLKGLRTVRAAC 242
+ CG H+ +T G+LF++GD T+G LG G + P E+ SL+G+ VR AC
Sbjct: 483 FVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVAC 542
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G +H+ A+ SG +F WG D G+LG G+KE K PT + +
Sbjct: 543 GGFHSFALT------------ISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVK 590
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+ACG T LT G V+ G GQLG+ ++ R L S + ++ CG +H
Sbjct: 591 HIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHH 650
Query: 363 VAVLT-SKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
VL SK +Y +G+G +G+LG + ++P V
Sbjct: 651 TLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 19/243 (7%)
Query: 46 VLGGGLNRVGSC---FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE 102
VLG G N G C G + P+ L + CG H+ + + G +FSWG+
Sbjct: 448 VLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGD 507
Query: 103 ESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFG 160
+ G+LG G V + P + +L + + VACG +H+ A+T+SG ++ WG + G
Sbjct: 508 NTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKN--DVG 565
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LG GN+ + P + + V I+CG HTA++T+ G +F FG G+ G LGHG
Sbjct: 566 QLGLGNKENKSYPTLLRN-MRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSN 624
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ PR+V L G + CG HT V+ G S G+L+ +G G G+LG
Sbjct: 625 YNEVNPRKVIDLMGSDITQVTCGKHHTL----VLEG-------SKGRLYAFGQGIHGQLG 673
Query: 281 HGD 283
+
Sbjct: 674 QDE 676
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 174/413 (42%), Gaps = 47/413 (11%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G VF++G+G+ +G LG G N + P+ + + D+ + CG H +
Sbjct: 264 ADGGVFLFGQGS-EGQLGHGSN---------YNEVNPRKVIDLMGSDITQVTCGKHHTLV 313
Query: 91 VN-KQGEVFSWGEESGGRLGHGVDSDVLHPKLI----------DALSNMNIELVAC---G 136
+ +G ++++G+ G+LG +P+ + + S+ +V C G
Sbjct: 314 LEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAG 373
Query: 137 EYH--TCAVTLSGD-----LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+H + A + D L+ F L LE + + ++
Sbjct: 374 GHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVA 433
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGV--LGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
CG HT V+ Q+ +G G L GD ++ PR + L + V+ CG H+
Sbjct: 434 CGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHS 493
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCRVA 305
A+ G+LF+WGD G+LG G PT + +L RVA
Sbjct: 494 MALTR------------DGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVA 541
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
CG + ALT SG V+ G GQLG + K + + V+ IACG H A+
Sbjct: 542 CGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAM 601
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT+ V+ +G+G+ G+LGHG + +P V L + + CG + T +
Sbjct: 602 LTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG+ T G LG +G+ D P L S + + +ACGG H+ +
Sbjct: 160 GRLFSWGDNTY-GQLG-----IGTLVTNYTDR--PTELTSLRGVPLVRVACGGFHSFALT 211
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ G+LG G + +P L+ + + ++ +ACG+ HT +T G ++ +
Sbjct: 212 ISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 271
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT-SAGQLFTFGDGT 211
G G+ G LGHG+ + P++V L G ++ ++CG HT V+ S G+L+ FG G
Sbjct: 272 GQGSE--GQLGHGSNYNEVNPRKVID-LMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 328
Query: 212 FGVLGHGDRKSVSIPREV 229
G LG + +S S P+ V
Sbjct: 329 HGQLGQDEARSCSNPQRV 346
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 12/198 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG+ T G LG +G+ D P L S + + +ACGG H+ +
Sbjct: 500 GRLFSWGDNTY-GQLG-----IGTLVTNYTDR--PTELTSLRGVPLVRVACGGFHSFALT 551
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ G+LG G + +P L+ + + ++ +ACG+ HT +T G ++ +
Sbjct: 552 ISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 611
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT-SAGQLFTFGDGT 211
G G+ G LGHG+ + P++V L G ++ ++CG HT V+ S G+L+ FG G
Sbjct: 612 GQGSE--GQLGHGSNYNEVNPRKVID-LMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 668
Query: 212 FGVLGHGDRKSVSIPREV 229
G LG + +S S P+ V
Sbjct: 669 HGQLGQDEARSCSNPQRV 686
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 181/369 (49%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG G G++ + L P+ + VQ +ACG RH +
Sbjct: 6 ELYCWG-STSHGQLGLG--------GIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P+LI L + I ++CG H+ A++ G + +W
Sbjct: 57 ATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LGH E +V L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG D + P + +L G+ ACG GN S SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + ++ R+ +L S + ++ACG+ H +A++ S+ +VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLV 397
P +V
Sbjct: 341 KSLMLPQVV 349
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 29/332 (8%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P+ I + ++ VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 154 DGTYNFGLLGHG--NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
Y+ LGH + +P+ L+ + ISCG H+ ++ GQ+ ++GD
Sbjct: 66 SNDYS--QLGHDLPTKRPQLIPE-----LQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 212 FGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGH K V +P+ V L V+ ACG H+ A+ S G+L++
Sbjct: 119 CGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELYS 166
Query: 271 WGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG N + + P +++ L V +ACG LT++ V+T G GA G+LGHG
Sbjct: 227 CGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ + P +V L + +ACG T A+
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 86/172 (50%), Gaps = 10/172 (5%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P + + +VACGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKV 61
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
Y GS Y QLG+ K P + +L + +I+CGS H L+ +V +WG
Sbjct: 62 YACGSNDYSQLGH-DLPTKRPQLIP-ELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119
Query: 381 GRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH + + P +V L K V IACG N + A+ L+ W S +
Sbjct: 120 GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171
>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
Length = 1060
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 196/409 (47%), Gaps = 36/409 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
++ WG T G LG G G++ + + P+ ++ + +V + CG H + K
Sbjct: 3 IYCWG-NTAHGELGLG--------GIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTK 53
Query: 94 QGEVFSWGEESGGRLGHGVDS------DVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+G++++ G G+LGH +D+ + K + +L N I ++CG H+ A+T G
Sbjct: 54 EGKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWG 113
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+++WG G LGH E R+ + HV I+ G +H +T+ G+L+ +
Sbjct: 114 QVFSWGSNA--VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAW 171
Query: 208 GDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
G ++G LG G + V +P ++SL G+ ACG GN S + SG
Sbjct: 172 GSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACG------------GNHSFAVSKSG 219
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+F WG G+LG D ++ PT + L ++CG +V LT G V+T G+
Sbjct: 220 AIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAG 279
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGH 385
+GQLG+ ++ R +L S + +IACG H +A + S+ ++Y +G G G+LG
Sbjct: 280 TFGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGI 339
Query: 386 GDTDDRNSPSLVEALKDK-QVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
G + ++P +V K KS C I +++ SG DQ S
Sbjct: 340 GMVGNHSTPQIVRGPWFKTDFKSSDCDET---QIIVNRIFSGGDQCFVS 385
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 182/393 (46%), Gaps = 42/393 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + + G ++++ K+ +S A Q I G ++
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKI---LVPKLATSFGSA---------QQIEAGQYCTFVIFP 412
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY-------HTCAVTLS 146
G V + G+ S GRLG G ++ K + N + E + HT A+TL
Sbjct: 413 DGFVHACGKGSYGRLGLGDSTNQTQLKRL----NFDNECLVKSVSSSKGSDGHTLALTLD 468
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G +Y+WGDG Y G LGHGN + +PK V G L V I+ G H+A VT G+L+T
Sbjct: 469 GKVYSWGDGDY--GKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYT 526
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G+G +G LGHGD S ++P +V+ + + V ACG HT V +
Sbjct: 527 WGEGDYGRLGHGDNNSRNVPVQVKDVANVGQV--ACGSAHTVCVSQ-----------DGQ 573
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS- 325
++++G GD G+LGH D P + AL +V CG ++ALT++G VY G
Sbjct: 574 TVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCG 633
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
P G G+ A P + S S V +I+ G H LT VY WG + G+ G
Sbjct: 634 PSLGT-GSVDATSATPKLLLALQSHSVV-DISVGDSHCVALTQDNNVYAWGNNSMGQCGQ 691
Query: 386 GD-TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G T P V L V I+ GT+ T A
Sbjct: 692 GHCTTPITKPKKVLGLDGVAVHQISAGTSHTVA 724
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 146/308 (47%), Gaps = 30/308 (9%)
Query: 120 KLIDALSNMNIELVACGE--YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
KL D + ++ GE +H + + ++Y WG + + L G+ VPK
Sbjct: 335 KLADQYAKCTVKSGITGEVSFHGNSFASNEEVYVWGSNSSH--QLAEGSMDKILVPKLAT 392
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV----ESLK 233
I G + T V+ G + G G++G LG GD + + + + E L
Sbjct: 393 SFGSA---QQIEAGQYCTFVIFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLV 449
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
+ HT A+ GK+++WGDGD G+LGHG+ + + +P V
Sbjct: 450 KSVSSSKGSDG-HTLALT------------LDGKVYSWGDGDYGKLGHGNSQTQKIPKLV 496
Query: 294 -AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKS 351
AL C +A G+ + A+T G +YT G YG+LG+ + + +P +V+ +
Sbjct: 497 EGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVK---DVA 553
Query: 352 FVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
V ++ACGS H V V V+++G G NG+LGH DT+ P ++EAL+ ++ + C
Sbjct: 554 NVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCC 613
Query: 411 GTNFTAAI 418
G+ + A+
Sbjct: 614 GSQCSLAL 621
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 37 IWGEGTGD-GVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+W G+GD G LG NRV PK +E+ + ++ + CG + + +
Sbjct: 575 VWSFGSGDNGKLGHSDTNRVYK----------PKVIEALQGMVIRKVCCGSQCSLALTST 624
Query: 95 GEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V+ WG G LG G VD+ PKL+ AL + ++ ++ G+ H A+T ++Y WG
Sbjct: 625 GQVYVWG--CGPSLGTGSVDATSATPKLLLALQSHSVVDISVGDSHCVALTQDNNVYAWG 682
Query: 154 DGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ + G G G+ + PK+V G L+G+ V IS G HT T+
Sbjct: 683 NNS--MGQCGQGHCTTPITKPKKVLG-LDGVAVHQISAGTSHTVAWTA 727
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 160/345 (46%), Gaps = 32/345 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG+ GS G ++ SS P+ L+ A+ V+++ACG H+A+V
Sbjct: 1 VYFWGQ-------------AGSAVGEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGS 47
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV WGE G+ G G HP + +L + V+CG HT V+ G +++WG
Sbjct: 48 GEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGL 107
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHG+ + P V + G V +++CG HT +V + G+L+T G G
Sbjct: 108 GAN--GQLGHGSRDNLTTPSVVQ-AMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQ 164
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G G + P+ VESL+G A+CG HTA V G++FT+G G
Sbjct: 165 CGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVT------------GGGEVFTFGSG 212
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
G+LGHGD + +P V ALV VACG TV V+ G GQLG
Sbjct: 213 SCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGAS 272
Query: 335 QADGKL---PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
P ++E L + VE C V LT + + WG
Sbjct: 273 STSHPYLSEPRQME-FLKEEEVELCKCNQSEVIALTRRGALRAWG 316
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 154/325 (47%), Gaps = 22/325 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+ WG+ +G +G V S P+++ + VACG H+ V SG++ WG+
Sbjct: 1 VYFWGQ-AGSAVGEQVSSST--PRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENK 57
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
Y G G G + P V G L G+ S+SCG HT VV+ G++F++G G G LG
Sbjct: 58 Y--GQCGTGTQEQTEHPTFV-GSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLG 114
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
HG R +++ P V++++G + CGV HT V+ + G+L+T G
Sbjct: 115 HGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVL------------AGGELYTCGWNKN 162
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
G+ G G L P CV +L +CG T +T G V+T GS GQLG+
Sbjct: 163 GQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDC 222
Query: 337 -DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD--RNS 393
D +P RV G L + +ACG + V+ +G G+LG T +
Sbjct: 223 QDLSMPRRV-GALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSE 281
Query: 394 PSLVEALKDKQVKSIACGTNFTAAI 418
P +E LK+++V+ C + A+
Sbjct: 282 PRQMEFLKEEEVELCKCNQSEVIAL 306
>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
Length = 1054
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 195/406 (48%), Gaps = 31/406 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
D+F WG + G LG G G++ + L P + ++ IACG RH +
Sbjct: 2 DLFCWGNAS-HGQLGMG--------GIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLT 52
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P LI L N + +ACG H+ A+T G + +W
Sbjct: 53 ANGKVYACGNNDQAQLGHNLPTK--RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSW 110
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LG + S ++ L HV I+CG H+ +TS G+L+++G +
Sbjct: 111 GDN--DCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIY 168
Query: 213 GVLGHGDRKSVS---IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG + +S P + +L G+ ACG GN S S +F
Sbjct: 169 GQLGVKPPQELSHCNYPLRLTTLLGIPLATIACG------------GNHSFLISKSSAVF 216
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
+G + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 217 GFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYG 276
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+LG+ T
Sbjct: 277 QLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRST 336
Query: 389 DDRNSPSLVEALKDKQVKSIACGTN-FTAAICLHKWVSGVDQSMCS 433
+ P V S +N A++ +H+ SG DQS+ +
Sbjct: 337 NSVTLPQEVLGPWVSPSDSALLQSNDAKASVVIHQIFSGGDQSIVT 382
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/422 (31%), Positives = 190/422 (45%), Gaps = 81/422 (19%)
Query: 33 GDVFIWGEGTGDGVLG--GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
G + WG DGVLG GG+ ++ P A+ES + V+ +A G H+
Sbjct: 567 GLILSWG-ANSDGVLGHTGGIEQL-----------WPLAIESLSSVQVKMVAAGEFHSLC 614
Query: 91 VNKQGEVFSWGEESGGRLGHGV-----DSD---VLHPKLI---DALSNMNIELVACGEYH 139
+ + GEV S+G G+ G + SD V P+ I D L + +A G YH
Sbjct: 615 LTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYH 674
Query: 140 TCAVTLSGDLYTWGDG-TYNFG-----LLGHGNEVSHW------------VPKRVNGPLE 181
+ VT G+LYT+G G + G LG G H+ P R++ L
Sbjct: 675 SALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSA-LN 733
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRA 240
G V ++CG +H+A VT G L+T+G G G LGHGD + P+ VE+ +K V+
Sbjct: 734 GQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKV 793
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE--------------- 285
ACG H+AAV S+G ++T G + G+LG GD+
Sbjct: 794 ACGENHSAAVD------------SAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWS 841
Query: 286 -AKLVPTCVAALV--EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN 342
+ +PT ++ L F +ACGH A+T G +YT G LG P D P
Sbjct: 842 CQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLG-PSGDVSEPT 900
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD--RNSPSLVEAL 400
+ S V +ACG H A LT K ++Y WG GRLG G + + +P LV A
Sbjct: 901 HLS---SIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAF 957
Query: 401 KD 402
D
Sbjct: 958 AD 959
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 61/314 (19%)
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
LH +L N + E +A EY+ +G + +WG + G+LGH + P +
Sbjct: 539 LHLLSEASLKNKSEEFIA--EYYKNIKEQTGLILSWGANSD--GVLGHTGGIEQLWPLAI 594
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH--------GDRKSVSIPRE 228
L + V ++ G +H+ +T G++ +FG G G D +V+ PR
Sbjct: 595 ES-LSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRP 653
Query: 229 V---ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
+ + L+ V A G +H+A V + G+L+T+G G + +LGH
Sbjct: 654 IVLPDDLRKKTVVSIAAGGYHSALVT------------ADGELYTFGRGGEFQLGHD--- 698
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE 345
V AL E G++L ++ Y P+ P R+
Sbjct: 699 ------TVMALGEG-------GNALHYRSNSAQTSYF----------QPK-----PTRLS 730
Query: 346 GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA-LKDKQ 404
L+ V+++ACG +H A +T + +YTWG+GANG+LGHGD D+ +P VEA +KDK
Sbjct: 731 A-LNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKI 789
Query: 405 VKSIACGTNFTAAI 418
+ +ACG N +AA+
Sbjct: 790 MVKVACGENHSAAV 803
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 136/242 (56%), Gaps = 15/242 (6%)
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G LG G VP+++ EGI + ++ G HTA VT G+LF +G G +G LG GD
Sbjct: 7 GQLGLGTTEDSLVPQKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGD 65
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
R +P++V S+ G + V ACG HT +V S G L+T+G G+L
Sbjct: 66 RNDRLVPQKVSSVDGDKMVMVACGWRHTISV------------SSLGGLYTYGWSKYGQL 113
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADG 338
GHGD E +LVP + AL N +++ G T+ALTT G +Y G +GQ+G D
Sbjct: 114 GHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDH 173
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
P +++ + ++ I+CG H +T K V++WG+G NG+LGHG++ DRN+P ++E
Sbjct: 174 CSPIQIKFPQDQKVIQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILE 232
Query: 399 AL 400
AL
Sbjct: 233 AL 234
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 15/237 (6%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
WG G+LG G D L P+ I A ++I++VA G HT AVT G+L+ WG G Y
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY-- 58
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G LG G+ VP++V+ ++G + ++CG HT V+S G L+T+G +G LGHGD
Sbjct: 59 GNLGLGDRNDRLVPQKVS-SVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGD 117
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
+ +P +E+L+G + + G HT A+ + GKL+ WG G++
Sbjct: 118 FEDRLVPHRLEALRGDNISQISGGWRHTMAL------------TTDGKLYGWGWNKFGQV 165
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
G GD P + + +++CG T+A+T +V++ G GQLG+ ++
Sbjct: 166 GAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGES 222
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 124/239 (51%), Gaps = 15/239 (6%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G DS +P+ +++ + ++ +A G H A V + GE+F WG G LG G +D L
Sbjct: 11 LGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL 70
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P+ + ++ + +VACG HT +V+ G LYT+G Y G LGHG+ VP R+
Sbjct: 71 VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKY--GQLGHGDFEDRLVPHRLE 128
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L G ++S IS G HT +T+ G+L+ +G FG +G GD P +++ + +
Sbjct: 129 -ALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKV 187
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
++ +CG HT AV + +F+WG G G+LGHG+ + P + AL
Sbjct: 188 IQISCGWRHTLAVTDKQ------------NVFSWGRGTNGQLGHGESVDRNTPMILEAL 234
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G G LG G + +P+++++ +G+ A G HTAAV E G
Sbjct: 1 WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------------DG 48
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+LF WG G G LG GD+ +LVP V+++ VACG T+++++ G +YT G
Sbjct: 49 ELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWS 108
Query: 327 VYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
YGQLG+ + +L P+R+E L + +I+ G H LT+ ++Y WG G++G
Sbjct: 109 KYGQLGHGDFEDRLVPHRLEA-LRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGA 167
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GD D SP ++ +D++V I+CG T A+
Sbjct: 168 GDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 200
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P ++ V I+CG RH V + VFS
Sbjct: 149 TTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFS 208
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LGHG D P +++ALS
Sbjct: 209 WGRGTNGQLGHGESVDRNTPMILEALS 235
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 178/367 (48%), Gaps = 30/367 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSS-LPKALESAVVLDVQNIACGGRHAALVNK 93
+F WG T G LG G G++ ++ +P+ ++ A +V+ IACG + +
Sbjct: 1 MFCWG-STIHGELGLG--------GIEDENIFMPRQVDFAKANEVEQIACGENYTVTITN 51
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V+S G G+LGH L +LI L + +ACG HT AV G L++WG
Sbjct: 52 DGQVYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109
Query: 154 DGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G LG + + + P+ V + + I+CG H+ +T+ G+L+++G
Sbjct: 110 CNMK--GQLGLNSVDCTERTPRMVKALGTSV-IVQIACGIEHSIALTNDGELYSWGSNRE 166
Query: 213 GVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G I P+ + +L + ACG +HT + SG +F W
Sbjct: 167 GQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVI------------SKSGVVFAW 214
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D + ++VP + L C ACG +V LT G V+T G+ +YGQL
Sbjct: 215 GRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQL 274
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ +
Sbjct: 275 GHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRS 334
Query: 391 RNSPSLV 397
+P +V
Sbjct: 335 ATTPLVV 341
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 151/327 (46%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F WG G LG G D ++ P+ +D +E +ACGE +T +T G +Y+ G+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LGH E + + + G L+ I+CG HT V GQLF++G G
Sbjct: 61 NDY--GQLGH--EKARKRLQLIPG-LDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQ 115
Query: 215 LGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG PR V++L V+ ACG+ H+ A+ + G+L++WG
Sbjct: 116 LGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT------------NDGELYSWGS 163
Query: 274 GDKGRLGHGDKEA-KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G+LG G ++ P + L +ACG TV ++ SG V+ G +GQLG
Sbjct: 164 NREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N +P ++ L + V ACG LT V+T G G G+LGHG+ +
Sbjct: 224 LNDTQQRIVPCQLR-TLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
P V L V I+CG T A+
Sbjct: 283 ILPRQVMELMGSTVTQISCGKRHTLAL 309
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 134/276 (48%), Gaps = 21/276 (7%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ WG + LG + + ++P++V+ + V I+CG +T +T+ GQ+++ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPRQVDFA-KANEVEQIACGENYTVTITNDGQVYSCG 59
Query: 209 DGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+ +G LGH RK + + + L + ACG HT AV E G+
Sbjct: 60 NNDYGQLGHEKARKRLQL---IPGLDAFVFKKIACGSCHTLAVNE------------WGQ 104
Query: 268 LFTWGDGDKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
LF+WG KG+LG + + P V AL ++ACG ++ALT G +Y+ GS
Sbjct: 105 LFSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSN 164
Query: 327 VYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
GQLG + P R+ L+ + IACG YH V++ V+ WG+ G+LG
Sbjct: 165 REGQLGIGSHTVTEIKPKRI-ITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLG 223
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
DT R P + L++ +V ACG F+ + L
Sbjct: 224 LNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTL 259
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 169/314 (53%), Gaps = 24/314 (7%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H+A++ + G ++++G G+LG G P + +L + LVACG H
Sbjct: 40 HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T +G LY++G G+ G LG G+ P+ +N P + + +S G H+A +T
Sbjct: 100 TIVCTKAGRLYSFGAGSD--GQLGTGDAQCATSPQLINLPEQKYKL--LSAGTDHSAALT 155
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G L+ +G G+ G LG G+ SV P+E++ + V +CG +HTA V +
Sbjct: 156 TDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYHTAIVTD------- 206
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
GKL+T+G+ + G+LG + E P V ++ E VACG + T ++
Sbjct: 207 -----DGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVACGGAHTAVISDV 260
Query: 318 GHVYTMGSPVYGQLGNPQA--DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G++YT G ++GQLGN + LP +V +LS+ + ++CG H AV+T K +YT+
Sbjct: 261 GNLYTFGDGMHGQLGNGPSLLQLSLPQKV-ARLSEHKCKYVSCGDNHTAVITEKGAMYTF 319
Query: 376 GKGANGRLGHGDTD 389
G G +G+LG + D
Sbjct: 320 GDGRHGKLGISEED 333
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 142/276 (51%), Gaps = 26/276 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++S V +ACG H + K G ++S+G S G+LG G P+LI+ L
Sbjct: 79 PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LP 137
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-- 184
+L++ G H+ A+T G LY WG G+ G LG GN S PK + H
Sbjct: 138 EQKYKLLSAGTDHSAALTTDGTLYMWGSGSE--GQLGLGNTDSVETPKELK-----FHSS 190
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAAC 242
VS +SCG +HTA+VT G+L+TFG+ FG LG + + P+ VES+ + AC
Sbjct: 191 VSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE-KIKLVAC 249
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G HTA + +V G L+T+GDG G+LG+G +L +P VA L E
Sbjct: 250 GGAHTAVISDV------------GNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKC 297
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD 337
V+CG + T +T G +YT G +G+LG + D
Sbjct: 298 KYVSCGDNHTAVITEKGAMYTFGDGRHGKLGISEED 333
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 30/293 (10%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH---VSSIS 189
++CG+ H+ +T SG LYT+G + ++G LG G H P G ++ + V+ ++
Sbjct: 41 ISCGDEHSAIITESGRLYTFG--SNDWGQLGLG----HMKPTTKPGCVKSLKQEGVNLVA 94
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG HT V T AG+L++FG G+ G LG GD + + P+ + +L + + G H+AA
Sbjct: 95 CGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLI-NLPEQKYKLLSAGTDHSAA 153
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ + G L+ WG G +G+LG G+ ++ P + + V+CG+
Sbjct: 154 LT------------TDGTLYMWGSGSEGQLGLGNTDSVETPKELK--FHSSVSWVSCGYY 199
Query: 310 LTVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
T +T G +YT G +G+LG + D P VE K ++ +ACG H AV+
Sbjct: 200 HTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGAHTAVI 257
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAI 418
+ +YT+G G +G+LG+G + + S P V L + + K ++CG N TA I
Sbjct: 258 SDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVI 310
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 106/224 (47%), Gaps = 27/224 (12%)
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A + G +FTFG F + ++P + ++ + + +CG H+A + E
Sbjct: 7 ADIPETGAIFTFGKSRF---------ADNLPSKFW-IRNDKAMHISCGDEHSAIITE--- 53
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG+L+T+G D G+LG G + P CV +L + VACG S T+ T
Sbjct: 54 ---------SGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCT 104
Query: 316 TSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
+G +Y+ G+ GQLG A P + L + + ++ G+ H A LT+ +Y
Sbjct: 105 KAGRLYSFGAGSDGQLGTGDAQCATSPQLI--NLPEQKYKLLSAGTDHSAALTTDGTLYM 162
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG G+ G+LG G+TD +P E V ++CG TA +
Sbjct: 163 WGSGSEGQLGLGNTDSVETPK--ELKFHSSVSWVSCGYYHTAIV 204
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
++CG + +T SG +YT GS +GQLG L + V +ACG H
Sbjct: 40 HISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSH 99
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI---- 418
V T +Y++G G++G+LG GD SP L+ L +++ K ++ GT+ +AA+
Sbjct: 100 TIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDG 158
Query: 419 CLHKWVSGVDQSM 431
L+ W SG + +
Sbjct: 159 TLYMWGSGSEGQL 171
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
I+CG H A++T +YT+G G+LG G P V++LK + V +ACG + T
Sbjct: 41 ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHT 100
Query: 416 AAIC-----LHKWVSGVDQSMCSG 434
+C L+ + +G D + +G
Sbjct: 101 -IVCTKAGRLYSFGAGSDGQLGTG 123
>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 2063
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 166/314 (52%), Gaps = 40/314 (12%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ + +ACG H A ++ +G +F+WG GRLGHG ++D P+L+ L N NI VA
Sbjct: 9 IKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVAL 68
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP--LEGI------HVSS 187
GE HT A + +G+LY+WGD NFG+LGHG E+ P+ P +E + V+
Sbjct: 69 GERHTAAFSETGELYSWGDA--NFGVLGHG-ELQEGDPQIQTTPKLIEYLSRVLRKKVTH 125
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI---PREVESLKGLRTVRAACGV 244
++CG +HT T+ + +GDG GVLG G +I P+ + +L G + ACG
Sbjct: 126 VACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGVQQIACGW 185
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H A +++ +G L+TWG+G GRLGHGD+E P VA+L ++
Sbjct: 186 AHCAVLMD------------TGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQI 233
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLG--------NPQ----ADGKLPNRVEGKLSKSF 352
ACG + AL+ G V+ G+ G+LG NP+ A+ K+P RVE L
Sbjct: 234 ACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRVE-PLRGLQ 291
Query: 353 VEEIACGSYHVAVL 366
+ ++ACG VL
Sbjct: 292 ILQVACGMISTIVL 305
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 126/251 (50%), Gaps = 25/251 (9%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L I +S ++CG HTA +++ G LFT+G G +G LGHGD + PR V L V
Sbjct: 6 LRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVG 65
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-----DKEAKLVPTCVA 294
A G HTAA E +G+L++WGD + G LGHG D + + P +
Sbjct: 66 VALGERHTAAFSE------------TGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIE 113
Query: 295 AL---VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL----PNRVEGK 347
L + VACG T+ T Y G +G LG G+ P + G
Sbjct: 114 YLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSI-GA 172
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
L+ V++IACG H AVL ++YTWG+GA GRLGHGD +D P V +L+ ++
Sbjct: 173 LAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQ 232
Query: 408 IACGTNFTAAI 418
IACG AA+
Sbjct: 233 IACGFAHMAAL 243
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 156/314 (49%), Gaps = 42/314 (13%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+ +L + I VACG HT A++ G L+TWG G Y G LGHG+E P+ V G L
Sbjct: 3 VASLRRIKISRVACGWSHTAAISAKGLLFTWGMGRY--GRLGHGDETDQNAPRLV-GELL 59
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-----DRKSVSIPREVESLKGL- 235
++ ++ G HTA + G+L+++GD FGVLGHG D + + P+ +E L +
Sbjct: 60 NTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVL 119
Query: 236 --RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL-FTWGDGDKGRLGHGD---KEAKLV 289
+ ACG +HT ++ KL + WGDG G LG G + +
Sbjct: 120 RKKVTHVACGAYHTLCT-------------TADKLTYIWGDGGHGVLGQGGDFGRTIEWT 166
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKL 348
P + AL ++ACG + L +G +YT G G+LG+ + D K P++V L
Sbjct: 167 PQSIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQV-ASL 225
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG-----------HGDTDDRNSPSLV 397
+ + +IACG H+A L+ K EV+ G G GRLG H + ++ P V
Sbjct: 226 RGTRIVQIACGFAHMAALSDKGEVFVCGTGC-GRLGLDGEQGKSNPEHTEVANQKIPRRV 284
Query: 398 EALKDKQVKSIACG 411
E L+ Q+ +ACG
Sbjct: 285 EPLRGLQILQVACG 298
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 140/302 (46%), Gaps = 34/302 (11%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G +F WG G G LG G + D + P+ + + ++ +A G RH A
Sbjct: 26 AKGLLFTWGMGRY-GRLG---------HGDETDQNAPRLVGELLNTNIVGVALGERHTAA 75
Query: 91 VNKQGEVFSWGEESGGRLGHGV----DSDV-LHPKLIDALSNM---NIELVACGEYHTCA 142
++ GE++SWG+ + G LGHG D + PKLI+ LS + + VACG YHT
Sbjct: 76 FSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVACGAYHTLC 135
Query: 143 VTLSGDLYTWGD-------GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
T Y WGD +FG W P+ + G L G V I+CG H
Sbjct: 136 TTADKLTYIWGDGGHGVLGQGGDFG------RTIEWTPQSI-GALAGRGVQQIACGWAHC 188
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
AV+ G L+T+G+G G LGHGD + P +V SL+G R V+ ACG H AA+ +
Sbjct: 189 AVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSD--K 246
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G G+L G+ K H + + +P V L +VACG T+ L
Sbjct: 247 GEVFVCGTGCGRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMISTIVLQ 306
Query: 316 TS 317
+
Sbjct: 307 NT 308
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
+V SL+ ++ R ACG HTAA+ + G LFTWG G GRLGHGD+ +
Sbjct: 2 QVASLRRIKISRVACGWSHTAAI------------SAKGLLFTWGMGRYGRLGHGDETDQ 49
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG-------QLGNPQADGKL 340
P V L+ N VA G T A + +G +Y+ G +G Q G+PQ
Sbjct: 50 NAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTT- 108
Query: 341 PNRVE--GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN---SPS 395
P +E ++ + V +ACG+YH T+ Y WG G +G LG G R +P
Sbjct: 109 PKLIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQ 168
Query: 396 LVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+ AL + V+ IACG A + L+ W G
Sbjct: 169 SIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEG 203
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 61/150 (40%), Gaps = 33/150 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD++ WGEG G G LG G + D P + S + IACG H A ++
Sbjct: 195 GDLYTWGEGAG-GRLG---------HGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALS 244
Query: 93 KQGEVFSWGEESGGRLG-----------HGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
+GEVF G GRLG H ++ P+ ++ L + I VACG T
Sbjct: 245 DKGEVFVCGT-GCGRLGLDGEQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMISTI 303
Query: 142 AV-----------TLSGDLYTWGDGTYNFG 160
+ TL G+ W + FG
Sbjct: 304 VLQNTQDEQQSLSTLRGNYNIWREVLPEFG 333
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 178/367 (48%), Gaps = 30/367 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSS-LPKALESAVVLDVQNIACGGRHAALVNK 93
+F WG T G LG G G++ ++ +P+ ++ +V+ IACG + + K
Sbjct: 1 MFCWG-STIHGELGLG--------GIEDENIFMPREVDFIEASNVEQIACGENYTVAITK 51
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+G+V+S G G+LGH L +LI L +ACG HT AV G L++WG
Sbjct: 52 EGKVYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWG 109
Query: 154 DGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G LG + + + VP+ + + + I+CG H+ +T+ G+L+ +G
Sbjct: 110 CNMN--GQLGLNSVDCTERVPRMIKVLGTNV-IVQIACGTEHSIALTNDGELYAWGSNRE 166
Query: 213 GVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G + I P+ + +L + ACG +HT + SG +F+W
Sbjct: 167 GQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVI------------SKSGAVFSW 214
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D + + +P + L C CG +V LT G V+T G+ +YGQL
Sbjct: 215 GRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQL 274
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ +
Sbjct: 275 GHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQS 334
Query: 391 RNSPSLV 397
+P +V
Sbjct: 335 ATTPQVV 341
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 154/327 (47%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F WG G LG G D ++ P+ +D + N+E +ACGE +T A+T G +Y+ G+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LGH E + + + G L+ I+CG HT V GQLF++G G
Sbjct: 61 NDY--GQLGH--EKARKRLQLIPG-LDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115
Query: 215 LGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG +PR ++ L V+ ACG H+ A+ + G+L+ WG
Sbjct: 116 LGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT------------NDGELYAWGS 163
Query: 274 GDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+G+LG G ++ P ++ L +ACG T+ ++ SG V++ G +GQLG
Sbjct: 164 NREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N LP ++ L + V CG LT V+T G G G+LGHG+T +
Sbjct: 224 LNDVQQRNLPCQLR-TLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
P V L V I+CG T A+
Sbjct: 283 ILPRQVMELMGSTVTQISCGKRHTLAL 309
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ WG + LG + + ++P+ V+ +E +V I+CG +T +T G++++ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFMPREVDF-IEASNVEQIACGENYTVAITKEGKVYSCG 59
Query: 209 DGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+ +G LGH RK + + + L + ACG HT AV E G+
Sbjct: 60 NNDYGQLGHEKARKRLQL---IPGLDAFVFRKIACGNCHTLAVNE------------WGQ 104
Query: 268 LFTWGDGDKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
LF+WG G+LG + + VP + L ++ACG ++ALT G +Y GS
Sbjct: 105 LFSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSN 164
Query: 327 VYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
GQLG + P R+ L+ + IACG YH V++ V++WG+ G+LG
Sbjct: 165 REGQLGLGSYTTTEIKPKRI-STLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLG 223
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
D RN P + L++ +V CG F+ + +
Sbjct: 224 LNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTM 259
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 159/315 (50%), Gaps = 33/315 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+ I L + +I V+CG HT A+T SG +Y+WG G+ G LGHG+ P+++
Sbjct: 40 PQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGS--MGQLGHGDLKIINEPQKIAF 97
Query: 179 -PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG---HGDRKSVSIPREV---ES 231
E + V ISCG H+A VT G L+ +G+ +G LG + S+P + E
Sbjct: 98 FEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEG 157
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-----DKEA 286
G V+ +CG HTAA+ S G+++ WG GD G+LG G D E
Sbjct: 158 EAGETIVKVSCGGTHTAALT------------SFGRVYVWGRGDSGQLGIGSVWMKDPEN 205
Query: 287 KLV-----PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKL 340
+ + P + A +VACG + A+T GHVY G YG LG Q+ D ++
Sbjct: 206 ESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQI 265
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P R+E V ++CG +H V+ + Y +G+G GRLG GDT R P LV+AL
Sbjct: 266 PKRLE-YFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKAL 324
Query: 401 KDKQVKSIACGTNFT 415
K K V ACG + T
Sbjct: 325 KGKTVIQAACGGSHT 339
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 178/394 (45%), Gaps = 35/394 (8%)
Query: 44 DGVLGGGLNRVGSCFGVKMD----SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
DG LG G R + + +D S+ P+ + + D+ ++CG RH + G V+S
Sbjct: 16 DGQLGTGAKRRPT---LAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYS 72
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSN--MNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
WG S G+LGHG + P+ I + ++ ++CG H+ AVT G LY WG+ +
Sbjct: 73 WGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHW 132
Query: 158 -NFGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
GL +P + P G + +SCG HTA +TS G+++ +G G G
Sbjct: 133 GQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQ 192
Query: 215 LGHG-----DRKSVSI-----PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
LG G D ++ S+ P +++ G + V+ ACG +H+AAV E
Sbjct: 193 LGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTE------------ 240
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G ++ WG D G LG G + +P + + RV+CG TV + SG Y G
Sbjct: 241 QGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFG 300
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YG+LG + + L V + ACG H +TS Y G+ +GRLG
Sbjct: 301 RGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLG 360
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
D P+ ++ L V+ + G + A+
Sbjct: 361 LADMKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 132/269 (49%), Gaps = 29/269 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +++WGE + G LG + + + +P+ ++ V +CGG H A +
Sbjct: 122 GTLYVWGE-SHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKV---SCGGTHTAALT 177
Query: 93 KQGEVFSWGEESGGRLGHGV------DSDVL----HPKLIDALSNMNIELVACGEYHTCA 142
G V+ WG G+LG G +++ L P L+ A + + VACG +H+ A
Sbjct: 178 SFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAA 237
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
VT G +Y WG ++G+LG G +PKR+ + I V +SCG WHT VV +G
Sbjct: 238 VTEQGHVYVWGK--EDYGMLGVGQSSDQQIPKRLE-YFDDIPVLRVSCGGWHTVVVAKSG 294
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+ FG G +G LG GD KS + P V++LKG ++AACG HT V
Sbjct: 295 DCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVT----------- 343
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
S G + G D GRLG D +A VPT
Sbjct: 344 -SDGTAYVAGRPDHGRLGLADMKALGVPT 371
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVK------MDSSLPKALESAVVLDVQNIACG 84
+ G V++WG G G LG +GS + M +S P L++ V +ACG
Sbjct: 178 SFGRVYVWGRGD-SGQLG-----IGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACG 231
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
H+A V +QG V+ WG+E G LG G SD PK ++ ++ + V+CG +HT V
Sbjct: 232 AFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVA 291
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
SGD Y +G G Y G LG G+ S P V L+G V +CG HT VTS G
Sbjct: 292 KSGDCYAFGRGEY--GRLGLGDTKSRTRPHLVKA-LKGKTVIQAACGGSHTLFVTSDGTA 348
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVE 230
+ G G LG D K++ +P ++
Sbjct: 349 YVAGRPDHGRLGLADMKALGVPTRLD 374
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 178/360 (49%), Gaps = 35/360 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACGG H+ + + GEV++ G + G+LGH + P+ I AL++ +I VACGE
Sbjct: 95 VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGHEKEGS--KPEQIGALADQHIIHVACGE 152
Query: 138 YHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G L++WG G+ GL + V+ VP+ + L + +SCG WH
Sbjct: 153 SHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVA--VPRLIKK-LNQEMILQVSCGNWHCL 209
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ + GQ F +G + G LG G + S + P+ V+SL G+ + A G H+ A+
Sbjct: 210 ALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 264
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D++ + P V L ++CG T LT
Sbjct: 265 -------SLSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLT 317
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
+G V+T G+ GQLG+ + ++ R +L S V +IACG H +A + S +Y
Sbjct: 318 KTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYA 377
Query: 375 WGKGANGRLGHGDTDDRNSPSLV---------------EALKDKQVKSIACGTNFTAAIC 419
+G G G+LG G T + PS V +A K VK I G + T +C
Sbjct: 378 FGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVLC 437
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 165/331 (49%), Gaps = 23/331 (6%)
Query: 93 KQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
K ++ WG S G G V +L P+ + +++ VACG H+ + G++Y
Sbjct: 56 KGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVY 115
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
T G T G LGH E S P+++ G L H+ ++CG H+ ++ G+LF++G G
Sbjct: 116 TCGVNTK--GQLGHEKEGSK--PEQI-GALADQHIIHVACGESHSLALSDQGRLFSWGAG 170
Query: 211 TFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+ G LG + SV++PR ++ L ++ +CG WH A+ + G+ F
Sbjct: 171 SDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLAL------------AADGQFF 218
Query: 270 TWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
WG G+LG G + ++ P V +L +VA G + + AL+ SG V+ G
Sbjct: 219 AWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTS 278
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG + + D + P V+ L V I+CGS H AVLT V+T+G G+ G+LGH
Sbjct: 279 GQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDS 337
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+D +P V L +V IACG T A
Sbjct: 338 FNDEVNPRRVLELMGSEVSQIACGRQHTLAF 368
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 159/316 (50%), Gaps = 23/316 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+F+ +G V G+N G G + + S P+ + + + ++ACG H+ ++ Q
Sbjct: 106 IFLLEDGE---VYTCGVNTKGQ-LGHEKEGSKPEQIGALADQHIIHVACGESHSLALSDQ 161
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +FSWG S G+LG D V P+LI L+ I V+CG +H A+ G + WG
Sbjct: 162 GRLFSWGAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWG 221
Query: 154 DGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
++ G LG G E S P+RV L+GI ++ ++ G H+ ++ +G +F +G T
Sbjct: 222 QNSH--GQLGLGKEFPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTS 278
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG D + P V+ L+ + V +CG HTA + + +G +FT+G
Sbjct: 279 GQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTK------------TGGVFTFG 326
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQL 331
G G+LGH ++ P V L+ ++ACG T+A +SG +Y G + GQL
Sbjct: 327 AGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQL 386
Query: 332 GNPQA-DGKLPNRVEG 346
G+ + K P+ V+G
Sbjct: 387 GSGHTCNLKCPSPVKG 402
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG+ + G LG +G F + P+ ++S + + +A GG H+ ++
Sbjct: 215 GQFFAWGQNS-HGQLG-----LGKEFPSQAS---PQRVKSLDGIPLAQVAAGGAHSFALS 265
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ + G+LG + D P + L + ++CG HT +T +G ++T+
Sbjct: 266 LSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTF 325
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G+ G LGH + P+RV L G VS I+CG HT A V S+G ++ FG G
Sbjct: 326 GAGS--CGQLGHDSFNDEVNPRRVL-ELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGI 382
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG G ++ P V+
Sbjct: 383 KGQLGSGHTCNLKCPSPVK 401
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 340 LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA 399
L R G + + V+E+ACG H L EVYT G G+LGH + + P + A
Sbjct: 82 LEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH--EKEGSKPEQIGA 139
Query: 400 LKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
L D+ + +ACG + + A+ L W +G D
Sbjct: 140 LADQHIIHVACGESHSLALSDQGRLFSWGAGSD 172
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 174/381 (45%), Gaps = 64/381 (16%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
+ G +H+ G +++WG GRLG G + L P ++D + + +I V G+ H+
Sbjct: 258 SAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSA 317
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ G LYTWG G FG LGHG++ VP++V G G+ V ++CG +HT +T
Sbjct: 318 CIDRQGVLYTWGSG--GFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGTFHTLALTHK 374
Query: 202 GQLFTFGDGTFGVLGHGDRKS---VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G +F +G G G G+ S V++P+ + ++ + A G +H+AAV VG
Sbjct: 375 GTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEA-AVLNIAAGPYHSAAVT---VG-- 428
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC---------------- 302
G L WG G RLGHGD++ + P VA L +
Sbjct: 429 -------GDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREY 481
Query: 303 ----------------------RVACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQAD 337
+ CG S T+ALT +G V+ GS GQLG + + D
Sbjct: 482 SDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEED 541
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
P ++E + + IACGS H + +V+ WG NG+LG G P+ V
Sbjct: 542 QYEPVKLE--CFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAV 599
Query: 398 EALKDKQVKSIACGTNFTAAI 418
AL +Q + CG +++A I
Sbjct: 600 TAL--RQAVDVFCGDDYSACI 618
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 168/382 (43%), Gaps = 41/382 (10%)
Query: 78 VQNIACGGRHAALVNKQG---EVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELV 133
V+ +A G H +V +G ++F WG+ LG GV+ + + P L+ S M V
Sbjct: 48 VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107
Query: 134 ACGEYHTCAVTL-----SGDLYTWGDGT----------------YNFGLLGHGNEVS-HW 171
+CG ++ + G +YT+G G Y G G E W
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167
Query: 172 V---PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
P RV + ++ ISCG HT ++ G L+ +G G++G LG GD P
Sbjct: 168 FTPKPSRVR-FRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVR 226
Query: 229 V----ESLKGLRTVRAACGVWHTAAVVEVM--VGNSSSSNCSS-GKLFTWGDGDKGRLGH 281
V E+ G + G VV G S C+S G L+TWG G GRLG
Sbjct: 227 VYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Query: 282 GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKL 340
G L P V +++ + V G S + + G +YT GS +G+LG+ Q + +
Sbjct: 287 GHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPV 346
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P +VEG V ++ACG++H LT K V+ WG G G G+ ++ + L
Sbjct: 347 PRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHL 405
Query: 401 KDKQ--VKSIACGTNFTAAICL 420
D + V +IA G +AA+ +
Sbjct: 406 SDIEAAVLNIAAGPYHSAAVTV 427
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 158/375 (42%), Gaps = 61/375 (16%)
Query: 80 NIACGGRHAALVNKQ-----GEVFSWGEESGGRLGH---------GVDSD---------- 115
++CG ++A++ K+ G+V+++G + GRLG+ G D
Sbjct: 106 EVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGP 165
Query: 116 ---VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
P + I ++CG HT A++ G LY WG G+Y G LG G+ +
Sbjct: 166 SWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSY--GNLGQGDTSDSYT 223
Query: 173 PKRVNGPLEG------------------IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
P RV E + V+ S G H+ TS G L+T+G G G
Sbjct: 224 PVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGR 283
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG G + P V+ + V G H+A + G L+TWG G
Sbjct: 284 LGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDR------------QGVLYTWGSG 331
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
GRLGHGD+ VP V +VACG T+ALT G V+ G+ + G
Sbjct: 332 GFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEG 391
Query: 335 QADGKLPNRVEGKLS--KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ V LS ++ V IA G YH A +T ++ WG G + RLGHGD ++
Sbjct: 392 EDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQP 451
Query: 393 SPSLVEALKDKQVKS 407
P V L+++ S
Sbjct: 452 FPKYVADLRNRMYVS 466
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 194/484 (40%), Gaps = 108/484 (22%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D G ++ WG G G R+G G + + +P+ +E + V +ACG H
Sbjct: 320 DRQGVLYTWGSG--------GFGRLGH--GDQGEIPVPRKVEGFGGVPVLQVACGTFHTL 369
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSD-----VLHPKLIDALSNMNIELVACGEYHTCAVT 144
+ +G VF+WG +G LG G D V PK + + + +A G YH+ AVT
Sbjct: 370 ALTHKGTVFAWG--AGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLN-IAAGPYHSAAVT 426
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS------------------ 186
+ GDL WG G + LGHG++ + PK V ++VS
Sbjct: 427 VGGDLLVWGVGGSS--RLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDL 484
Query: 187 -------------------SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSI 225
S+ CG HT +T AG ++ +G G LG G+ +
Sbjct: 485 DVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYE 544
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P ++E R ACG H AV + G +F WG D G+LG G
Sbjct: 545 PVKLECFS-TPIRRIACGSKHCLAVAQY------------GDVFAWGANDNGQLGLGVVR 591
Query: 286 AKLVPTCVAALVEPN--FC---RVACGHSLTVALTTSGH-------VYTMGSPVYGQLGN 333
P V AL + FC AC SL A + SG ++ G+ G+LG
Sbjct: 592 PSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651
Query: 334 PQ--ADGKL--PNRVE----------GKLSKSFVEEIAC--------GSYHVAVLTSKTE 371
+ A G + P +V L + + C G+ H +T++ E
Sbjct: 652 GEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGE 711
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK--WVSGVDQ 429
Y WG G GRLG G T + +P+ + K +++S+A G + A+ + W G +
Sbjct: 712 CYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRRE 771
Query: 430 SMCS 433
CS
Sbjct: 772 DTCS 775
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 136/346 (39%), Gaps = 70/346 (20%)
Query: 129 NIELVACGEYHTCAVTLSGD---LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+++ VA G YHT V L GD L+ WG N +LG G E+ V + +
Sbjct: 47 SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSN--VLGMGVEIRERVFPGLVPFFSKMGT 104
Query: 186 SSISCGPWHTAVVTS-----AGQLFTFGDGTFGVLGHGDRKSVSI--------------- 225
+SCG ++AV+ G+++TFG G G LG+ K+ +
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164
Query: 226 -------PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
P V + R +CG HT A+ + G L+ WG G G
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLALSD------------EGALYAWGVGSYGN 212
Query: 279 LGHGDKEAKLVPTCV---------------------AALVEPNFCRVACGHSLTVALTTS 317
LG GD P V A V C HS+ A T+
Sbjct: 213 LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSM--ACTSD 270
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G ++T G G+LG G L P V+ L + V + G H A + + +YTWG
Sbjct: 271 GTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVF-VNAGDSHSACIDRQGVLYTWG 329
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
G GRLGHGD + P VE V +ACGT T A+ HK
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HK 374
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 164/458 (35%), Gaps = 126/458 (27%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G LG G GS V ++PK L S + V NIA G H+A V
Sbjct: 375 GTVFAWGAGL---ALGFGEGEDGSGGMV----AVPKHL-SDIEAAVLNIAAGPYHSAAVT 426
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN------------------------- 127
G++ WG RLGHG + PK + L N
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486
Query: 128 -------------MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
++ + CGE HT A+T +G ++ WG + + G LG G +V +
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWG--SNDDGQLGLGEDVEEDQYE 544
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
V + I+CG H V G +F +G G LG G + P V +L+
Sbjct: 545 PVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR- 603
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSS--GKLFTWGDGDKGRLGHGDKEAK----- 287
+ V CG ++A + + S S + G L+ WG + G+LG G+ A
Sbjct: 604 -QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILT 662
Query: 288 ------LVPTC---VAALVEPNFCRVAC--------GHSLTVALTTSGHVYTMGSPVYGQ 330
VP C + +L + RV C G S ++A+T G Y G+ YG+
Sbjct: 663 PQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGR 722
Query: 331 LG-NPQADGKLPNR---------------------------------------------- 343
LG A+ P R
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSP 782
Query: 344 -----VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
+EG+ V+ I+ H +T EV+ WG
Sbjct: 783 RIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 146/378 (38%), Gaps = 91/378 (24%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V++WG DG LG G + V+ D P LE ++ IACG +H V
Sbjct: 519 GAVWVWGS-NDDGQLGLGED-------VEEDQYEPVKLE-CFSTPIRRIACGSKHCLAVA 569
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG----- 147
+ G+VF+WG G+LG GV P + AL +++ +Y C +L G
Sbjct: 570 QYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA-VDVFCGDDYSACITSLGGAQSVS 628
Query: 148 --------DLYTWGDGTYNFGLLGHGNEV---SHWVPKRVN----------GPLEGIHVS 186
DL+ WG G LG G +V S P++V LE
Sbjct: 629 GETGTEFGDLWAWG--AAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYK 686
Query: 187 SISC--------GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
+ C G H+ +T+ G+ + +G G +G LG G + P + KG+R
Sbjct: 687 RVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLR 746
Query: 239 RAACGVWHTAAVV---EVMVGNSSSSNCSS------------------------------ 265
A G H+ A+ ++ CS+
Sbjct: 747 SVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERH 806
Query: 266 -------GKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCR-VACGHSLTVALT 315
G++F WGD + G G ++A+ + P VA L P+ C+ VA G + +
Sbjct: 807 SLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGL--PSACQWVATGPQGSFFIL 864
Query: 316 TSGHVYTMGSPVYGQLGN 333
SG V+ G G+LG
Sbjct: 865 ASGEVFAAGVIKSGRLGT 882
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 34/278 (12%)
Query: 21 SQGSGHDDGDALGDVFIWGE------GTGDGVLGGG-LNRVGSCFGV-----KMDSSLPK 68
+Q + G GD++ WG G G+ V G L F V +DS +
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
A + + + G H+ + QGE ++WG GRLG G ++ P D +
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV 743
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI----H 184
+ VA G H+ A+++ GDL+ WG ++++ R+ LEG
Sbjct: 744 RLRSVAAGACHSLALSMDGDLWFWGRREDT-------CSTTNYMSPRIFMQLEGQGGVPK 796
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V SIS H+ VT AG++F +GD G G R++ + R E + GL + AC
Sbjct: 797 VKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRP-ERVAGLPS---ACQW 852
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
T + +SG++F G GRLG G
Sbjct: 853 VATGPQGSFFI-------LASGEVFAAGVIKSGRLGTG 883
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 174/381 (45%), Gaps = 64/381 (16%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
+ G +H+ G +++WG GRLG G + L P ++D + + +I V G+ H+
Sbjct: 258 SAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSA 317
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ G LYTWG G FG LGHG++ VP++V G G+ V ++CG +HT +T
Sbjct: 318 CIDRQGVLYTWGSG--GFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGTFHTLALTHK 374
Query: 202 GQLFTFGDGTFGVLGHGDRKS---VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G +F +G G G G+ S V++P+ + ++ + A G +H+AAV VG
Sbjct: 375 GTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEA-AVLNIAAGPYHSAAVT---VG-- 428
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC---------------- 302
G L WG G RLGHGD++ + P VA L +
Sbjct: 429 -------GDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREY 481
Query: 303 ----------------------RVACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQAD 337
+ CG S T+ALT +G V+ GS GQLG + + D
Sbjct: 482 SDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEED 541
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
P ++E + + IACGS H + +V+ WG NG+LG G P+ V
Sbjct: 542 QYEPVKLE--CFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAV 599
Query: 398 EALKDKQVKSIACGTNFTAAI 418
AL +Q + CG +++A I
Sbjct: 600 TAL--RQAVDVFCGDDYSACI 618
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 168/382 (43%), Gaps = 41/382 (10%)
Query: 78 VQNIACGGRHAALVNKQG---EVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELV 133
V+ +A G H +V +G ++F WG+ LG GV+ + + P L+ S M V
Sbjct: 48 VKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEV 107
Query: 134 ACGEYHTCAVTL-----SGDLYTWGDGT----------------YNFGLLGHGNEVS-HW 171
+CG ++ + G +YT+G G Y G G E W
Sbjct: 108 SCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSW 167
Query: 172 V---PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
P RV + ++ ISCG HT ++ G L+ +G G++G LG GD P
Sbjct: 168 FTPKPSRVR-FRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVR 226
Query: 229 V----ESLKGLRTVRAACGVWHTAAVVEVM--VGNSSSSNCSS-GKLFTWGDGDKGRLGH 281
V E+ G + G V+ G S C+S G L+TWG G GRLG
Sbjct: 227 VYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGL 286
Query: 282 GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKL 340
G L P V +++ + V G S + + G +YT GS +G+LG+ Q + +
Sbjct: 287 GHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPV 346
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P +VEG V ++ACG++H LT K V+ WG G G G+ ++ + L
Sbjct: 347 PRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHL 405
Query: 401 KDKQ--VKSIACGTNFTAAICL 420
D + V +IA G +AA+ +
Sbjct: 406 SDIEAAVLNIAAGPYHSAAVTV 427
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 158/375 (42%), Gaps = 61/375 (16%)
Query: 80 NIACGGRHAALVNKQ-----GEVFSWGEESGGRLGH---------GVDSD---------- 115
++CG ++A++ K+ G+V+++G + GRLG+ G D
Sbjct: 106 EVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGP 165
Query: 116 ---VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
P + I ++CG HT A++ G LY WG G+Y G LG G+ +
Sbjct: 166 SWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSY--GNLGQGDTSDSYT 223
Query: 173 PKRVNGPLEG------------------IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
P RV E + V+ S G H+ TS G L+T+G G G
Sbjct: 224 PVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGR 283
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG G + P V+ + V G H+A + G L+TWG G
Sbjct: 284 LGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDR------------QGVLYTWGSG 331
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
GRLGHGD+ VP V +VACG T+ALT G V+ G+ + G
Sbjct: 332 GFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEG 391
Query: 335 QADGKLPNRVEGKLS--KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ V LS ++ V IA G YH A +T ++ WG G + RLGHGD ++
Sbjct: 392 EDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQP 451
Query: 393 SPSLVEALKDKQVKS 407
P V L+++ S
Sbjct: 452 FPKYVADLRNRMYVS 466
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 194/484 (40%), Gaps = 108/484 (22%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D G ++ WG G G R+G G + + +P+ +E + V +ACG H
Sbjct: 320 DRQGVLYTWGSG--------GFGRLGH--GDQGEIPVPRKVEGFGGVPVLQVACGTFHTL 369
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSD-----VLHPKLIDALSNMNIELVACGEYHTCAVT 144
+ +G VF+WG +G LG G D V PK + + + +A G YH+ AVT
Sbjct: 370 ALTHKGTVFAWG--AGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLN-IAAGPYHSAAVT 426
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS------------------ 186
+ GDL WG G + LGHG++ + PK V ++VS
Sbjct: 427 VGGDLLVWGVGGSS--RLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDL 484
Query: 187 -------------------SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSI 225
S+ CG HT +T AG ++ +G G LG G+ +
Sbjct: 485 DVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYE 544
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P ++E R ACG H AV + G +F WG D G+LG G
Sbjct: 545 PVKLECFS-TPIRRIACGSKHCLAVAQY------------GDVFAWGANDNGQLGLGVVR 591
Query: 286 AKLVPTCVAALVEPN--FC---RVACGHSLTVALTTSGH-------VYTMGSPVYGQLGN 333
P V AL + FC AC SL A + SG ++ G+ G+LG
Sbjct: 592 PSFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGL 651
Query: 334 PQ--ADGKL--PNRVE----------GKLSKSFVEEIAC--------GSYHVAVLTSKTE 371
+ A G + P +V L + + C G+ H +T++ E
Sbjct: 652 GEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGE 711
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK--WVSGVDQ 429
Y WG G GRLG G T + +P+ + K +++S+A G + A+ + W G +
Sbjct: 712 CYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRRE 771
Query: 430 SMCS 433
CS
Sbjct: 772 DTCS 775
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 136/346 (39%), Gaps = 70/346 (20%)
Query: 129 NIELVACGEYHTCAVTLSGD---LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+++ VA G YHT V L GD L+ WG N +LG G E+ V + +
Sbjct: 47 SVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSN--VLGMGVEIRERVFPGLVPFFSKMGT 104
Query: 186 SSISCGPWHTAVVTS-----AGQLFTFGDGTFGVLGHGDRKSVSI--------------- 225
+SCG ++AV+ G+++TFG G G LG+ K+ +
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164
Query: 226 -------PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
P V + R +CG HT A+ + G L+ WG G G
Sbjct: 165 PSWFTPKPSRVRFRDKCKIARISCGADHTLALSD------------EGALYAWGVGSYGN 212
Query: 279 LGHGDKEAKLVPTCV---------------------AALVEPNFCRVACGHSLTVALTTS 317
LG GD P V A V C HS+ A T+
Sbjct: 213 LGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSM--ACTSD 270
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G ++T G G+LG G L P V+ L + V + G H A + + +YTWG
Sbjct: 271 GTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVF-VNAGDSHSACIDRQGVLYTWG 329
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
G GRLGHGD + P VE V +ACGT T A+ HK
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HK 374
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 164/458 (35%), Gaps = 126/458 (27%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G LG G GS V ++PK L S + V NIA G H+A V
Sbjct: 375 GTVFAWGAGL---ALGFGEGEDGSGGMV----AVPKHL-SDIEAAVLNIAAGPYHSAAVT 426
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN------------------------- 127
G++ WG RLGHG + PK + L N
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486
Query: 128 -------------MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
++ + CGE HT A+T +G ++ WG + + G LG G +V +
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWG--SNDDGQLGLGEDVEEDQYE 544
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
V + I+CG H V G +F +G G LG G + P V +L+
Sbjct: 545 PVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR- 603
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSS--GKLFTWGDGDKGRLGHGDKEAK----- 287
+ V CG ++A + + S S + G L+ WG + G+LG G+ A
Sbjct: 604 -QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILT 662
Query: 288 ------LVPTC---VAALVEPNFCRVAC--------GHSLTVALTTSGHVYTMGSPVYGQ 330
VP C + +L + RV C G S ++A+T G Y G+ YG+
Sbjct: 663 PQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGR 722
Query: 331 LG-NPQADGKLPNR---------------------------------------------- 343
LG A+ P R
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSP 782
Query: 344 -----VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
+EG+ V+ I+ H +T EV+ WG
Sbjct: 783 RIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWG 820
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 146/378 (38%), Gaps = 91/378 (24%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V++WG DG LG G + V+ D P LE ++ IACG +H V
Sbjct: 519 GAVWVWGS-NDDGQLGLGED-------VEEDQYEPVKLE-CFSTPIRRIACGSKHCLAVA 569
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG----- 147
+ G+VF+WG G+LG GV P + AL +++ +Y C +L G
Sbjct: 570 QYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQA-VDVFCGDDYSACITSLGGAQSVS 628
Query: 148 --------DLYTWGDGTYNFGLLGHGNEV---SHWVPKRVN----------GPLEGIHVS 186
DL+ WG G LG G +V S P++V LE
Sbjct: 629 GETGTEFGDLWAWG--AAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYK 686
Query: 187 SISC--------GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
+ C G H+ +T+ G+ + +G G +G LG G + P + KG+R
Sbjct: 687 RVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLR 746
Query: 239 RAACGVWHTAAVV---EVMVGNSSSSNCSS------------------------------ 265
A G H+ A+ ++ CS+
Sbjct: 747 SVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERH 806
Query: 266 -------GKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCR-VACGHSLTVALT 315
G++F WGD + G G ++A+ + P VA L P+ C+ VA G + +
Sbjct: 807 SLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGL--PSACQWVATGPQGSFFIL 864
Query: 316 TSGHVYTMGSPVYGQLGN 333
SG V+ G G+LG
Sbjct: 865 ASGEVFAAGVIKSGRLGT 882
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 34/278 (12%)
Query: 21 SQGSGHDDGDALGDVFIWGE------GTGDGVLGGG-LNRVGSCFGV-----KMDSSLPK 68
+Q + G GD++ WG G G+ V G L F V +DS +
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
A + + + G H+ + QGE ++WG GRLG G ++ P D +
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV 743
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI----H 184
+ VA G H+ A+++ GDL+ WG ++++ R+ LEG
Sbjct: 744 RLRSVAAGACHSLALSMDGDLWFWGRREDT-------CSTTNYMSPRIFMQLEGQGGVPK 796
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V SIS H+ VT AG++F +GD G G R++ + R E + GL + AC
Sbjct: 797 VKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRP-ERVAGLPS---ACQW 852
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
T + +SG++F G GRLG G
Sbjct: 853 VATGPQGSFFI-------LASGEVFAAGVIKSGRLGTG 883
>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
Length = 1057
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG GG+ + S +P ++AV Q +ACG RH +
Sbjct: 6 ELYCWG-STSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P LI L + + ++CG H+ A++ G + +W
Sbjct: 57 ANGKVYACGSNDHSQLGHELPTK--RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LGH + +V L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLGHGDRKSVS---IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG K ++ P + +L G+ ACG GN S SG +F
Sbjct: 173 GQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLV 397
P +V
Sbjct: 341 KSLMLPQVV 349
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 159/333 (47%), Gaps = 31/333 (9%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P I + ++ VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65
Query: 154 DGTYNFGLLGHGNEVSHWVPKR---VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
++ ++ H +P + + L+ V ISCG H+ ++ GQ+ ++GD
Sbjct: 66 SNDHS--------QLGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117
Query: 211 TFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGH D++ V +P+ V L V+ ACG H+ A+ S G+L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165
Query: 270 TWGDGDKGRLGHG---DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 166 SWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 327 VYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG N +A+ P +++ L V +ACG LT++ V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDEANRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G + + P +V L + +ACG T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 89/175 (50%), Gaps = 16/175 (9%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P+ + + +VACGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKV 61
Query: 321 YTMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
Y GS + QLG+ +LP + + +L V +I+CGS H L+ +V +WG
Sbjct: 62 YACGSNDHSQLGH-----ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGD 116
Query: 378 GANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH D + P +V L K V IACG N + A+ L+ W S +
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 174/348 (50%), Gaps = 27/348 (7%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+++ A G RH+ L+ GE+ S+G+ S G+LG PK I AL + ++LV+CG
Sbjct: 24 ELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G NE+ + +P+++ L I + +SCG H+
Sbjct: 84 KEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEI-NLIPRKIKT-LTDIKIIQVSCGHHHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ G+LFT+G + G LG G S + P+ V+ L G+ + A G H+ A+
Sbjct: 142 ALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV----PTCVAALVEPNFCRVACGHSLT 311
SG F WG +G+L K +V P V AL ++CG+ T
Sbjct: 197 -------SLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHT 249
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSK 369
LT +G V+T G YGQLG +P A + P VEG V +I CGSYH +A + +
Sbjct: 250 AVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTT 307
Query: 370 TEVYTWGKG--ANGRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGTN 413
+V ++G+G H + N L+ A L D +VK I GT+
Sbjct: 308 GKVVSFGRGPCCKSSPTHPEAPTENFTCLISADDLVDFEVKHIFAGTH 355
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 139/268 (51%), Gaps = 29/268 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDAL 125
PK + + L V ++CG H+ V +G VF+WG S G+LG G +++ L P+ I L
Sbjct: 66 PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTL 125
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+++ I V+CG +H+ A++ G L+TWG ++ G LG G E S P+RV L+GI
Sbjct: 126 TDIKIIQVSCGHHHSLALSEDGRLFTWGSNSH--GQLGLGKECPSQASPQRVQF-LDGIP 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-----PREVESLKGLRTVR 239
++ ++ G H+ ++ +G F +G + G L +K+V + P V++L+ L V
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLAL-RKKNVPVVQSSKPCSVDALENLGVVY 241
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HTA + + +GK+FT+G G+LG+ K P V ++
Sbjct: 242 ISCGYEHTAVLTQ------------TGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG-IDG 288
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPV 327
++ CG T+A +VYT G V
Sbjct: 289 LVSQIDCGSYHTLA-----YVYTTGKVV 311
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 120/247 (48%), Gaps = 26/247 (10%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ S G+L ++GD + G LG D + P+ + +L+ LR +
Sbjct: 22 GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ E L+P + L +
Sbjct: 82 CGKEHSLAV------------CYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEE 355
+V+CGH ++AL+ G ++T GS +GQLG QA P RV+ L + +
Sbjct: 130 IIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQAS---PQRVQF-LDGIPLTQ 185
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD----DRNSPSLVEALKDKQVKSIACG 411
+A G H L+ + WG + G+L + + P V+AL++ V I+CG
Sbjct: 186 VAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCG 245
Query: 412 TNFTAAI 418
TA +
Sbjct: 246 YEHTAVL 252
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 133/274 (48%), Gaps = 32/274 (11%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLG-GGLNRVGSCFGVKMD 63
A++ RV L S S + G VF WG G+ +G LG G N +
Sbjct: 71 ALETLRVDLVSCGKEHSLAVCYK-----GRVFAWGAGS-EGQLGIGEFNEI--------- 115
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLI 122
+ +P+ +++ + + ++CG H+ +++ G +F+WG S G+LG G + P+ +
Sbjct: 116 NLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRV 175
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN--EVSHWVPKRVNGPL 180
L + + VA G H+ A++LSG + WG + L N V P V+ L
Sbjct: 176 QFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDA-L 234
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
E + V ISCG HTAV+T G++FTFG ++G LG+ P+ VE + GL + +
Sbjct: 235 ENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGLVS-QI 293
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
CG +HT A V ++GK+ ++G G
Sbjct: 294 DCGSYHTLAYVY-----------TTGKVVSFGRG 316
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ + A G H +L S E++++G ++G+LG D + P + AL+ +V ++CG
Sbjct: 25 LRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGK 84
Query: 413 NFTAAIC 419
+ A+C
Sbjct: 85 EHSLAVC 91
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 191/400 (47%), Gaps = 54/400 (13%)
Query: 46 VLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
+ G G N G G ++ P +++ D+ + G A++ GEV+S G S
Sbjct: 13 LYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNS 72
Query: 105 GGRLGHG-VDSDVLHPKLIDALSNMN-----------IELVACGE--YHTCAVTLSGDLY 150
G+ G G +D V P+++ +L+ + + LV G H VT G+L
Sbjct: 73 EGQCGIGEIDETV--PEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQ 130
Query: 151 TWGDGTYNFGLLGHGNEVS--HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
T G N G LGHG EV + +P+ V G G V+ ++C HT VVT + +TFG
Sbjct: 131 TCGRN--NSGQLGHG-EVGKGYSLPRPVAG-FAGYRVTKVACSYSHTVVVTDDDRTWTFG 186
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
+G LGHGD S S P + +GL + ACGV+HT V +SG L
Sbjct: 187 GNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVVSV------------ASGGL 234
Query: 269 FTWGDGDKGRLGHGDKEAKLVPT---CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+++G D G+LG E++ P ++VE ++ACG+ TVAL+ +G V G
Sbjct: 235 YSFGKNDHGQLGLEGGESRFTPVQHRACTSVVE----QLACGYYHTVALSRAGEVVAFGR 290
Query: 326 PVYGQLGNPQAD-----GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
YGQLG + G++P+ L+ + ++ACGSYH L + VY +G+ +
Sbjct: 291 NDYGQLGLGHRESTWQGGQVPD-----LAGLRIIQVACGSYHTISLDDEGRVYPFGRNNH 345
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G+LG G +D P VE L V +A G F +CL
Sbjct: 346 GQLGTGTREDACRPCFVEGLSQSFVCQVAAG--FYHTLCL 383
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 156/333 (46%), Gaps = 32/333 (9%)
Query: 50 GLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC-------------GGRHAALVNKQGE 96
G N G C ++D ++P+ + S + ++ + G H +V ++GE
Sbjct: 69 GYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGE 128
Query: 97 VFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+ + G + G+LGHG V P+ + + + VAC HT VT D TW G
Sbjct: 129 LQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVT--DDDRTWTFG 186
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+G LGHG+ S P + +G+ V S++CG +HT V ++G L++FG G L
Sbjct: 187 GNGYGQLGHGDHSSRSAPAAL-ACFQGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQL 245
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G +S P + + + + ACG +HT A+ +G++ +G D
Sbjct: 246 GLEGGESRFTPVQHRACTSV-VEQLACGYYHTVALSR------------AGEVVAFGRND 292
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-P 334
G+LG G +E+ V L +VACG T++L G VY G +GQLG
Sbjct: 293 YGQLGLGHRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGT 352
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ D P VEG LS+SFV ++A G YH LT
Sbjct: 353 REDACRPCFVEG-LSQSFVCQVAAGFYHTLCLT 384
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 137/299 (45%), Gaps = 33/299 (11%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
SLP+ + V +AC H +V +++G G+LGHG S P +
Sbjct: 150 SLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALAC 209
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ + VACG YHT SG LY++G + G LG S + P +
Sbjct: 210 FQGLGVLSVACGVYHTVVSVASGGLYSFGKN--DHGQLGLEGGESRFTPVQHRACTS--V 265
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V ++CG +HT ++ AG++ FG +G LG G R+S +V L GLR ++ ACG
Sbjct: 266 VEQLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGS 325
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
+HT ++ + G+++ +G + G+LG G +E P V L + C+V
Sbjct: 326 YHTISLDD------------EGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQV 373
Query: 305 ACGHSLTVALT------TSGH--------VYTMGSPVYGQLGNP-QADGKLPNRVEGKL 348
A G T+ LT +GH ++ S +Y L NP Q+D + VEGK+
Sbjct: 374 AAGFYHTLCLTGPPLERKAGHGSAFVVRDSKSLSSDLYRLLNNPSQSD--VTFTVEGKV 430
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 29/230 (12%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+L+ FG G LG GD P ++ +G V G TA +
Sbjct: 12 ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLT----------- 60
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEA---KLVPTCV-AALVEPNF---CRVACGHS-----L 310
++G++++ G +G+ G G+ + ++VP+ L EP+F RV+ HS
Sbjct: 61 -NTGEVYSCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEH 119
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLT 367
V +T G + T G GQLG+ + GK LP V G + V ++AC H V+T
Sbjct: 120 LVVVTEEGELQTCGRNNSGQLGHGEV-GKGYSLPRPVAG-FAGYRVTKVACSYSHTVVVT 177
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+T+G G+LGHGD R++P+ + + V S+ACG T
Sbjct: 178 DDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVV 227
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+L+ +G G LG GD + PT + V G+ LT LT +G VY+ G
Sbjct: 12 ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYN 71
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC-------------GSYHVAVLTSKTEVY 373
GQ G + D +P V L+K + E + GS H+ V+T + E+
Sbjct: 72 SEGQCGIGEIDETVPEMVP-SLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQ 130
Query: 374 TWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAI 418
T G+ +G+LGHG+ S P V +V +AC + T +
Sbjct: 131 TCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVV 176
>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii GT1]
Length = 1020
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 162/373 (43%), Gaps = 73/373 (19%)
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
++ P+L+DAL N+N E V+ G V SG+LY WG + G LG G+ VP+
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSE--GQLGTGDRRDASVPR 177
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HG--------------- 218
V L G V +++C HT G + +G G LG HG
Sbjct: 178 LVKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236
Query: 219 ---------DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+V PR +ESL G ACG +H+A +G S LF
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSA-----FLGIYEQDRTS---LF 288
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
T G G GRLGHGD+E + +PT V AL N +ACG T +T++G +YT G +G
Sbjct: 289 TCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348
Query: 330 QLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR----- 382
+LG G LP V G L V +A GS H A +T+ E+YTWG+G G
Sbjct: 349 KLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFF 408
Query: 383 -----------------------------LGHGDTD-DRNSPSLVEALKDKQVKSIACGT 412
LGHGD + N P+ + AL K V ++C +
Sbjct: 409 RGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCAS 468
Query: 413 NFTAAICLHKWVS 425
FT A C + VS
Sbjct: 469 TFTVAFCDPQRVS 481
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 47/237 (19%)
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ ++ PR V++LK + + R + G A V SG+L+ WG +G+LG
Sbjct: 119 EEMASPRLVDALKNINSERVSAGGMQMAVVAH------------SGELYMWGANSEGQLG 166
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-------- 332
GD+ VP V AL VAC TV G Y G + G+LG
Sbjct: 167 TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPS 226
Query: 333 -------NPQADGKLPN-----------RVEGKLSKSFVEEIACGSYHVAVL----TSKT 370
+P A G P RV L F+ ++ACG YH A L +T
Sbjct: 227 SAGLGVFSP-ATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRT 285
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKW 423
++T G G NGRLGHGD +DR+ P+ V AL++ + +IACG + TA + L+ W
Sbjct: 286 SLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTW 342
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 131/293 (44%), Gaps = 56/293 (19%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+ V+ L+ I+ +S G AVV +G+L+ +G + G LG GDR+ S+PR V++L
Sbjct: 124 PRLVDA-LKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKAL 182
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG-HG--------- 282
G AC HT ++ G + WG GRLG HG
Sbjct: 183 HGKVVKAVACSQEHTVCCLD------------DGSAYAWGCALNGRLGLHGLSIPSSAGL 230
Query: 283 -----------DKEAKLVPTCVAALVEPNFC-----RVACG--HSLTVALTTSGH--VYT 322
+ A C ++E + C VACG HS + + ++T
Sbjct: 231 GVFSPATGARPEPLASACAVCTPRVLE-SLCGYFIADVACGPYHSAFLGIYEQDRTSLFT 289
Query: 323 MGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G + G+LG+ + D LP V L + IACG++H A +TS +YTWG A G
Sbjct: 290 CGLGLNGRLGHGDEEDRHLPTAVH-ALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348
Query: 382 RLGHGDTDDRNSPSLVE----ALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+LG G T R S L + L++K V S+A G+ +A + L+ W G
Sbjct: 349 KLGLGST--RGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQG 399
>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii VEG]
Length = 1015
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 162/373 (43%), Gaps = 73/373 (19%)
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
++ P+L+DAL N+N E V+ G V SG+LY WG + G LG G+ VP+
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSE--GQLGTGDRRDASVPR 177
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HG--------------- 218
V L G V +++C HT G + +G G LG HG
Sbjct: 178 LVKA-LHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236
Query: 219 ---------DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+V PR +ESL G ACG +H+A +G S LF
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSA-----FLGIYEQDRTS---LF 288
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
T G G GRLGHGD+E + +PT V AL N +ACG T +T++G +YT G +G
Sbjct: 289 TCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348
Query: 330 QLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR----- 382
+LG G LP V G L V +A GS H A +T+ E+YTWG+G G
Sbjct: 349 KLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFF 408
Query: 383 -----------------------------LGHGDTD-DRNSPSLVEALKDKQVKSIACGT 412
LGHGD + N P+ + AL K V ++C +
Sbjct: 409 RGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCAS 468
Query: 413 NFTAAICLHKWVS 425
FT A C + VS
Sbjct: 469 TFTVAFCDPQRVS 481
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 108/237 (45%), Gaps = 47/237 (19%)
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ ++ PR V++LK + + R + G A V SG+L+ WG +G+LG
Sbjct: 119 EEMASPRLVDALKNINSERVSAGGMQMAVVAH------------SGELYMWGANSEGQLG 166
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-------- 332
GD+ VP V AL VAC TV G Y G + G+LG
Sbjct: 167 TGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPS 226
Query: 333 -------NPQADGKLPN-----------RVEGKLSKSFVEEIACGSYHVAVL----TSKT 370
+P A G P RV L F+ ++ACG YH A L +T
Sbjct: 227 SAGLGVFSP-ATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRT 285
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKW 423
++T G G NGRLGHGD +DR+ P+ V AL++ + +IACG + TA + L+ W
Sbjct: 286 SLFTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTW 342
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 131/293 (44%), Gaps = 56/293 (19%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+ V+ L+ I+ +S G AVV +G+L+ +G + G LG GDR+ S+PR V++L
Sbjct: 124 PRLVDA-LKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKAL 182
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG-HG--------- 282
G AC HT ++ G + WG GRLG HG
Sbjct: 183 HGKVVKAVACSQEHTVCCLD------------DGSAYAWGCALNGRLGLHGLSIPSSAGL 230
Query: 283 -----------DKEAKLVPTCVAALVEPNFC-----RVACG--HSLTVALTTSGH--VYT 322
+ A C ++E + C VACG HS + + ++T
Sbjct: 231 GVFSPATGARPEPLASACAVCTPRVLE-SLCGYFIADVACGPYHSAFLGIYEQDRTSLFT 289
Query: 323 MGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G + G+LG+ + D LP V L + IACG++H A +TS +YTWG A G
Sbjct: 290 CGLGLNGRLGHGDEEDRHLPTAVH-ALENVNITAIACGAHHTACVTSAGTLYTWGGAAFG 348
Query: 382 RLGHGDTDDRNSPSLVE----ALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+LG G T R S L + L++K V S+A G+ +A + L+ W G
Sbjct: 349 KLGLGST--RGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQG 399
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 161/320 (50%), Gaps = 20/320 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ + CGG+H+ + G V++ G S G+LGH D + P+++ AL I +V+CG
Sbjct: 35 LKEVGCGGQHSVFLMHDGSVYTCGSNSCGQLGH--DKAGISPEVVGALDTQKITMVSCGR 92
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV G L+ WG G + G LG G E + +P+ V L +S + CG H
Sbjct: 93 GHSMAVNEQGQLFAWGAG--DGGQLGLGTTETTVRIPRLVKR-LCDHRISQVMCGNQHCV 149
Query: 197 VVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQLFT+G T G LG G S P ++SL G+ + G
Sbjct: 150 ALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAG------------ 197
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G+ S + SG +F WG G+LG DK+ + VP + L ++CG T ALT
Sbjct: 198 GDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALT 257
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G ++T G +GQLG+ + +L R +L + V +IACG +H +A + S VY
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYA 317
Query: 375 WGKGANGRLGHGDTDDRNSP 394
+G ++G+LG G D SP
Sbjct: 318 FGCNSHGQLGTGILGDARSP 337
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 155/326 (47%), Gaps = 22/326 (6%)
Query: 97 VFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+ WG G+LG GV+ + V P+ S ++ V CG H+ + G +YT G
Sbjct: 1 MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ G LGH + V G L+ ++ +SCG H+ V GQLF +G G G L
Sbjct: 61 SC--GQLGHDKA---GISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQL 115
Query: 216 GHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G G ++ V IPR V+ L R + CG H A+ G+LFTWG
Sbjct: 116 GLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVAL------------SRDGQLFTWGQN 163
Query: 275 DKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG- 332
G+LG G E +KL P + +L ++ G + AL+ SG V+ G GQLG
Sbjct: 164 TSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGL 223
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
N + D +P ++ S+ V I+CG H A LT ++T+G G+ G+LGHG T+
Sbjct: 224 NDKQDRAVPCHIKFLRSQKVVY-ISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSEL 282
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
P V L +V IACG + T A
Sbjct: 283 LPRRVLELMGTEVSQIACGRHHTLAF 308
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 25/271 (9%)
Query: 14 SSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
+ ++ S G GH + G +F WG G G G LG G + +P+ ++
Sbjct: 82 TQKITMVSCGRGHSMAVNEQGQLFAWGAGDG-GQLGLG--------TTETTVRIPRLVKR 132
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ + CG +H +++ G++F+WG+ + G+LG G + L P + +L+ + +
Sbjct: 133 LCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLA 192
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+ G H+ A++LSG ++ WG G LG ++ VP + L V ISCG
Sbjct: 193 QITAGGDHSFALSLSGAVFGWGKN--RAGQLGLNDKQDRAVPCHIKF-LRSQKVVYISCG 249
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
HTA +T G LFTFGDG++G LGHG S +PR V L G + ACG HT A V
Sbjct: 250 DEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFV 309
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
SSG ++ +G G+LG G
Sbjct: 310 P-----------SSGVVYAFGCNSHGQLGTG 329
>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
Length = 1058
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 181/369 (49%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG GG+ + S +P ++AV + +ACG RH +
Sbjct: 6 ELYCWG-STSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----EQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P LI L + I ++CG H+ A++ G + +W
Sbjct: 57 ANGKVYACGSNDHSQLGHDLPTK--RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LGH + +V L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLGHGDRKSVS---IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG K ++ P + +L G+ ACG GN S SG +F
Sbjct: 173 GQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLV 397
P +V
Sbjct: 341 KSLMLPQVV 349
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 158/333 (47%), Gaps = 31/333 (9%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P I + +E VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65
Query: 154 DGTYNFGLLGHGNEVSHWVPKR---VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
++ ++ H +P + + L+ + ISCG H+ ++ GQ+ ++GD
Sbjct: 66 SNDHS--------QLGHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117
Query: 211 TFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGH D++ + +P+ V L V+ ACG H+ A+ S G+L+
Sbjct: 118 DCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165
Query: 270 TWGDGDKGRLGHG---DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 166 SWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 327 VYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG N + + P +++ L V +ACG LT++ V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G + + P +V L + +ACG T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 16/175 (9%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P+ + + +VACGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKV 61
Query: 321 YTMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
Y GS + QLG+ LP + + +L + +I+CGS H L+ +V +WG
Sbjct: 62 YACGSNDHSQLGH-----DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116
Query: 378 GANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH D + P +V L K V IACG N + A+ L+ W S +
Sbjct: 117 NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171
>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
purpuratus]
Length = 946
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/323 (33%), Positives = 160/323 (49%), Gaps = 33/323 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P I+ + + I VA H VT +Y+WG+G+ G LGHG+ VP V
Sbjct: 68 PFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSK--GQLGHGDLDPRNVPTSVEA 125
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
L+G ++ ++CG + + G + T GDG+ G LGHGD S S PR +E+L +
Sbjct: 126 -LKGKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVT 184
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
+CG H VV V V G++F WG G GRLG GD+E P V L +
Sbjct: 185 SISCGPEH---VVGVGV---------DGEIFAWGKGKDGRLGLGDEEDFCEPMEVT-LRD 231
Query: 299 PNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN--------RVEGK-- 347
P F + V CG T+ LT G + GS Y +LG G L + VEG+
Sbjct: 232 PVFIQEVKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKV 291
Query: 348 ------LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
LSK V ++ G +H AV+ VY +GK +G+LG G+T R +P+ V+ +
Sbjct: 292 PTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMA 351
Query: 402 DKQVKSIACGTNFTAAICLHKWV 424
DK + ++ACG ++T A + ++
Sbjct: 352 DKLISTVACGEDYTVAGAMDNFL 374
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 148/322 (45%), Gaps = 17/322 (5%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDA 124
+P +E +L ++ +A H ALV + V+SWGE S G+LGHG D D + P ++A
Sbjct: 67 IPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHG-DLDPRNVPTSVEA 125
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L +I VACG + + +G + T GDG+ G LGHG+ S P+ + L +
Sbjct: 126 LKGKSITRVACGAGFSVFGSDNGIVMTCGDGST--GCLGHGDYHSASRPRLIETLL-SVD 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V+SISCGP H V G++F +G G G LG GD + P EV + CGV
Sbjct: 183 VTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGV 242
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDG----DKGRLGHGDKEAKLVPTCVAALVEPN 300
T + ++ + SN + G K + E + VPT V AL +
Sbjct: 243 DGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFR 302
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEI 356
+ G + + G VY G +GQLG P+ + P +V+ ++ + +
Sbjct: 303 VLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPR---EAPAQVQ-TMADKLISTV 358
Query: 357 ACGSYHVAVLTSKTEVYTWGKG 378
ACG + +Y WGKG
Sbjct: 359 ACGEDYTVAGAMDNFLYLWGKG 380
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 129/307 (42%), Gaps = 43/307 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMD-SSLPKALESAVVLDVQNIACGGRHAALVNK 93
V+ WGEG+ G LG G +D ++P ++E+ + +ACG + +
Sbjct: 98 VYSWGEGS-KGQLGHG----------DLDPRNVPTSVEALKGKSITRVACGAGFSVFGSD 146
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G V + G+ S G LGHG P+LI+ L ++++ ++CG H V + G+++ WG
Sbjct: 147 NGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFAWG 206
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G G LG G+E P V + + + + CG T +T G L G +
Sbjct: 207 KG--KDGRLGLGDEEDFCEPMEVT-LRDPVFIQEVKCGVDGTMFLTDMGCLLACGSNAYN 263
Query: 214 VLGHGDRKSV----------------SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
LG R+ +P V++L R + G H+A VVE
Sbjct: 264 KLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVVE----- 318
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G ++ +G G+LG G+ + + P V + + VACG TVA
Sbjct: 319 -------PGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLISTVACGEDYTVAGAMD 371
Query: 318 GHVYTMG 324
+Y G
Sbjct: 372 NFLYLWG 378
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 195/418 (46%), Gaps = 51/418 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI--ACGGRHAAL 90
GDV G G G LG G N+ S PK +ES + + +I A G + A+
Sbjct: 91 GDVLTVG-FNGSGQLGHGNNK---------SISTPKKIESLKNIRITHISSANGCENLAI 140
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL----- 145
+++ G++++ G + G+LGHG S++ P L+ AL + + V+C YH+ VT
Sbjct: 141 ISQDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQA 200
Query: 146 -SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
+ + G + G LG + PK + L V +CG H+ VT G++
Sbjct: 201 SNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRS-LNTRQVIQTACGLHHSVFVTVHGEV 259
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
F+ G G LGH D KS + P +ESLK V+AACG +HT +
Sbjct: 260 FSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRD------------ 307
Query: 265 SGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTV----------- 312
+G+++ +G DKG+LG + +A + P + + + + + G+ +
Sbjct: 308 TGEIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSS 367
Query: 313 -ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+L SG + G L N Q +V+ K + +IACG YH L +
Sbjct: 368 QSLGESGAI-MQGLAESNNLNNQQP------QVQYLSKKVNISKIACGCYHSIALCESGQ 420
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQ 429
++T+G+G +G+LG G+T+D+ P V +L DK+V IA G T + K V G+ Q
Sbjct: 421 LFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKVKGISQ 478
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 141/277 (50%), Gaps = 25/277 (9%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ +G +Y G LG G+ +P +V + ++V+ I+ G H AV+T G + T G
Sbjct: 41 VFVFGQNSY--GELGLGDVQERSIPSQVRF-FDEMNVTQIAAGNEHIAVLTRNGDVLTVG 97
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRT--VRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
G LGHG+ KS+S P+++ESLK +R + +A G + A + + G
Sbjct: 98 FNGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQ------------DG 145
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV------ALTTSG 318
KL+T G + G+LGHG + PT V AL + V+C HSL V A
Sbjct: 146 KLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQT 205
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY++G GQLG ++ ++ L+ V + ACG +H +T EV++ G
Sbjct: 206 TVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFN 265
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
NG+LGH DT RN P L+E+LK+K + ACG T
Sbjct: 266 DNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHT 302
>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
Length = 1058
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 179/369 (48%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG G G++ + L P+ + VQ ++CG RH +
Sbjct: 6 ELYCWG-STSHGQLGLG--------GIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P+LI L + I ++CG H+ A++ G + +W
Sbjct: 57 ATGKVYACGSNDYSQLGHDLPTK--RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LGH E +V L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG D + P + +L G+ ACG GN S SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L ACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + ++ R+ +L S + ++ACG+ H +A + S+ +VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLV 397
P +V
Sbjct: 341 KSLMLPQVV 349
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 155/332 (46%), Gaps = 29/332 (8%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P+ I + ++ V+CG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65
Query: 154 DGTYNFGLLGHG--NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
Y+ LGH + +P+ L+ + ISCG H+ ++ GQ+ ++GD
Sbjct: 66 SNDYS--QLGHDLPTKRPQLIPE-----LQDYVIIQISCGSRHSLALSDWGQVLSWGDND 118
Query: 212 FGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGH K V +P+ V L V+ ACG H+ A+ S G+L++
Sbjct: 119 CGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELYS 166
Query: 271 WGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 226
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG N + + P +++ L V ACG LT++ V+T G GA G+LGHG
Sbjct: 227 CGQLGLNDETNRAYPTQLK-TLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ + P +V L + +ACG T A
Sbjct: 286 FSSNEMLPRMVMELMGSTITQVACGNRHTLAF 317
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 10/172 (5%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P + + +V+CGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKV 61
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
Y GS Y QLG+ K P + +L + +I+CGS H L+ +V +WG
Sbjct: 62 YACGSNDYSQLGH-DLPTKRPQLIP-ELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDC 119
Query: 381 GRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH + + P +V L K V IACG N + A+ L+ W S +
Sbjct: 120 GQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNI 171
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 154/292 (52%), Gaps = 20/292 (6%)
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG----EYHTCAVTLSGDLYTWG 153
FSWG + G LG G V P I AL + + VACG E H+ AVT G +YTWG
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G G LGHG+ + +P+ + G L+ + ++CG HT VV+ AG +F +G G FG
Sbjct: 61 SG--KSGQLGHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G + + P +V SL G++ + ACG HTA V E SG ++TWG
Sbjct: 118 QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTE------------SGHVYTWGW 165
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQLG 332
G G+LGHGD ++ P V L +ACG + TV ++ V++ G YGQLG
Sbjct: 166 GVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLG 225
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+ D N+ +++IACGS + L+S+ +VY +G G +G+LG
Sbjct: 226 HGGWDIFGGNKNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 145/261 (55%), Gaps = 18/261 (6%)
Query: 76 LDVQNIACGG----RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
L V ++ACGG +H+A V +QG+V++WG G+LGHG +++ P+LI L + I
Sbjct: 31 LLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIV 90
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
VACG HT V+ +G ++ WG G +FG LG G+ + P +V L+G+ V ++CG
Sbjct: 91 EVACGSAHTVVVSKAGLVFAWGWG--HFGQLGVGSTHNSNDPVQVT-SLDGVKVCKVACG 147
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
HTAVVT +G ++T+G G G LGHGD S S P V+ L G+ ACG+ HT V
Sbjct: 148 SAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVS 207
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
EV +F+WG + G+LGHG + + + ++ACG S T
Sbjct: 208 EV-----------DRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDLQQIACGSSYT 256
Query: 312 VALTTSGHVYTMGSPVYGQLG 332
+AL++ G VY G GQLG
Sbjct: 257 LALSSRGDVYAFGWGKDGQLG 277
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 126/245 (51%), Gaps = 19/245 (7%)
Query: 180 LEGIHVSSISCG----PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
L+G+ V S++CG H+A VT GQ++T+G G G LGHGD +++ +PR + L+
Sbjct: 28 LQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSN 87
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
V ACG HT V + +G +F WG G G+LG G P V +
Sbjct: 88 PIVEVACGSAHTVVVSK------------AGLVFAWGWGHFGQLGVGSTHNSNDPVQVTS 135
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVE 354
L C+VACG + T +T SGHVYT G V GQLG+ A P V+ KL +V
Sbjct: 136 LDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVK-KLHGIYVS 194
Query: 355 EIACGSYHVAVLTS-KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+ACG H V++ V++WG G+LGHG D K ++ IACG++
Sbjct: 195 TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPIKDLQQIACGSS 254
Query: 414 FTAAI 418
+T A+
Sbjct: 255 YTLAL 259
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 112/219 (51%), Gaps = 18/219 (8%)
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG----VWHTAAVVEVMVGNSSS 260
F++G G LG G +V P + +L+GL V ACG H+AAV E
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTE-------- 52
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
G+++TWG G G+LGHGD + ++P + L VACG + TV ++ +G V
Sbjct: 53 ----QGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLV 108
Query: 321 YTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+ G +GQLG + P +V L V ++ACGS H AV+T VYTWG G
Sbjct: 109 FAWGWGHFGQLGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVTESGHVYTWGWGV 167
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
NG+LGHGD ++ P V+ L V ++ACG T +
Sbjct: 168 NGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVV 206
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG----HSLTVALTTSGHVYTMG 324
F+WG + G LG G +A P + AL VACG + A+T G VYT G
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S GQLG+ + + R+ L + + E+ACGS H V++ V+ WG G G+LG
Sbjct: 61 SGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLG 120
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSGCRLPFN 440
G T + N P V +L +V +ACG+ TA + ++ W GV+ + G +
Sbjct: 121 VGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQS 180
Query: 441 N--FKRKRHNCY----NCGL 454
+ +K H Y CGL
Sbjct: 181 RPMYVKKLHGIYVSTLACGL 200
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 163/327 (49%), Gaps = 24/327 (7%)
Query: 97 VFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+++WG RLG G D P+LI N I+ VACG HT + G L+++G
Sbjct: 12 LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFG-- 69
Query: 156 TYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
YN +G LG+G +V + + + +++CG +H+A + G +FT+G G G
Sbjct: 70 -YNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGR 128
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LGH D ++ +IP + L R + CG TAA+ + L+TWG G
Sbjct: 129 LGHNDEQTRTIPCRITHLP--RAHKIFCGYHITAAITD-------------DGLYTWGWG 173
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFC--RVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+ G+LG G E P V + N ++ACG + T SG VYT GS +GQLG
Sbjct: 174 EHGQLGQGSLEDSYGPKKVI-FDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLG 232
Query: 333 NPQADGKLPNRVE-GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + + V L+ V +A G H A +T+ ++TWG GA G+ GHGD +D
Sbjct: 233 IGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDC 292
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P LVE+L + + CG NFT A+
Sbjct: 293 DMPFLVESLVGVFILKVFCGHNFTVAL 319
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 160/316 (50%), Gaps = 22/316 (6%)
Query: 59 GVKMDSSLPKALE-SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K+DS L + + S++ + +ACG H+A ++ G VF+WG GRLGH +
Sbjct: 79 GTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRT 138
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P I L + + CG + T A+T G LYTWG G + G LG G+ + PK+V
Sbjct: 139 IPCRITHLPRAH--KIFCGYHITAAITDDG-LYTWGWGEH--GQLGQGSLEDSYGPKKVI 193
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV-SIPREVESLKGLR 236
+ +S ++CG H V T +G ++T+G FG LG G + S P + SL G+
Sbjct: 194 FDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMM 253
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
A G H+AAV ++G LFTWG G +G+ GHGD +P V +L
Sbjct: 254 VTFVAAGDRHSAAVT------------NTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESL 301
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEE 355
V +V CGH+ TVAL+ +Y G+ YGQLG+ ++ P ++ + + +
Sbjct: 302 VGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTI--D 359
Query: 356 IACGSYHVAVLTSKTE 371
I CG +H + T+ E
Sbjct: 360 ITCGHFHCTLWTTLEE 375
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 264 SSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+S L+TWG RLG G ++ P + +VACG T+ L G +++
Sbjct: 8 ASSALYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHS 67
Query: 323 MGSPVYGQLGN-PQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G YGQLGN + D L +R LS + +ACG YH A L V+TWG G N
Sbjct: 68 FGYNQYGQLGNGTKVDSPLDASRDISSLSNKLI-AVACGRYHSAALDVNGTVFTWGGGKN 126
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC---LHKW 423
GRLGH D R P + L + I CG + TAAI L+ W
Sbjct: 127 GRLGHNDEQTRTIPCRITHL--PRAHKIFCGYHITAAITDDGLYTW 170
>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1294
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 169/345 (48%), Gaps = 29/345 (8%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELV 133
L ++ ++CG H+A + ++G +++ G G+LG S P L++ LS + +
Sbjct: 58 LIIRTVSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKSITSSSTPCLVEDLSKIKCLSL 117
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG+ HT AV +G++Y WGDG+Y G LG+G++ S + P R+ E + CG
Sbjct: 118 SCGQSHTIAVMQNGEVYGWGDGSY--GQLGNGSQESRFAPTRIVS--ENNEFIQVQCGSR 173
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
HT ++ + + G G LG +S I ++ L + AACG +H+ + E
Sbjct: 174 HTILLDLKKKAYVCGSNENGQLG---LRSTKIELFIKKLDNKGFIEAACGQFHSLLLDE- 229
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G++++ G G+LG G K + T + +L ++A G S + A
Sbjct: 230 -----------QGRVYSTGANSFGQLGIGTKNNQYEFTQINSLEGEQIVKIAAG-SHSAA 277
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
L G +Y G+ V+G+ PN++ S + +I+ G++ A + V+
Sbjct: 278 LNKKGEMYIWGTGVFGEYL-------FPNKINRHSSGTTFSDISVGNFFAAAVDINGAVW 330
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
TWG +NG LG GD + + P ++ALK + V+ I CG F A+
Sbjct: 331 TWGANSNGELGQGDYEPKTLPQTLQALKGRHVQKICCGGGFAMAL 375
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 138/262 (52%), Gaps = 19/262 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G +M PK +E + V +IACG H+A + G V +WG+ GRLGHG D L
Sbjct: 2 GNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLR 61
Query: 119 PKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
PKL++AL +AC G+ T +T ++++WGDG Y G LG G +P ++
Sbjct: 62 PKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKLPYKI 119
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
L G+ V + CG + +T +G ++T+G G F LGHG V P++V +L+G +
Sbjct: 120 ES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK 178
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
+ A G H A CS SG+++TWGD D+G+LG G A P V A
Sbjct: 179 IISIATGSLHCVA-------------CSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTA 225
Query: 296 LVEPNFCRVACGHSLTVALTTS 317
L + +V CG + T+AL+TS
Sbjct: 226 LQGKHIVKVTCGSAHTLALSTS 247
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 132/258 (51%), Gaps = 17/258 (6%)
Query: 164 HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
HGN +S+ PK V L G+ V+ I+CG H+A +T++G + T+G G +G LGHGD +
Sbjct: 1 HGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQ 59
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGH 281
P+ VE+L G R + ACG + + C +++WGDGD G+LG
Sbjct: 60 LRPKLVEALLGYRAIDIACG------------SGDAQTLCITDDDNVWSWGDGDYGKLGR 107
Query: 282 GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KL 340
G + +P + +L +V CG +VALT SG VYT G + +LG+ D +
Sbjct: 108 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRR 167
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P +V K + IA GS H + EVYTWG G+LG G P LV AL
Sbjct: 168 PKKVAALQGKKII-SIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTAL 226
Query: 401 KDKQVKSIACGTNFTAAI 418
+ K + + CG+ T A+
Sbjct: 227 QGKHIVKVTCGSAHTLAL 244
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 126/261 (48%), Gaps = 17/261 (6%)
Query: 110 HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
HG PKL++ L+ M++ +ACG H+ A+T SG + TWG G Y G LGHG+
Sbjct: 1 HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSED 58
Query: 170 HWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
PK V L G I+CG T +T ++++GDG +G LG G +P
Sbjct: 59 QLRPKLVEA-LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
++ESL GL V+ CG + A+ + SG ++TWG GD RLGHG +
Sbjct: 118 KIESLAGLGVVKVECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHV 165
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGK 347
P VAAL +A G VA + SG VYT G GQLG+ R+
Sbjct: 166 RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTA 225
Query: 348 LSKSFVEEIACGSYHVAVLTS 368
L + ++ CGS H L++
Sbjct: 226 LQGKHIVKVTCGSAHTLALST 246
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P VE L+ V +IACGS H A +T+ V TWGKG GRLGHGD++D+ P LVEAL
Sbjct: 10 PKLVE-HLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEAL 68
Query: 401 KDKQVKSIACGTNFTAAICLHK------WVSG----VDQSMCSGCRLPFN 440
+ IACG+ +C+ W G + + GC+LP+
Sbjct: 69 LGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK 118
>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 1166
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 185/396 (46%), Gaps = 42/396 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V++WG T G LG G S P ++ + +++IACG H + + +
Sbjct: 36 VYVWGSDTY-GQLGLASREFGK--------SCPSPRFTSFSVVIEDIACGEEHTSFIAQN 86
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V+S G + G+LG VD P L++ L ++CG YHT V +G L+TW
Sbjct: 87 GYVYSMGNNNQGQLGVSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLFTW 146
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G LG G + P+ V+ L+ +SCG +T V+T ++F FGDG
Sbjct: 147 GQNCE--GQLGIGKSDNMTTPQIVD--LKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKC 202
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G+ + PR+++ ++ V +CG HT + E G+ F+ G
Sbjct: 203 GQLGLGNECNEYKPRQLQ-IQMQNIVAISCGDRHTLFLNE------------EGEAFSCG 249
Query: 273 DGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHS-LTVALTTSGHVYTMGSPVYGQ 330
+ +LG + ++ +P V F +V ++ ++ AL++ G++Y G+ +GQ
Sbjct: 250 NNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGFFGQ 309
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
P R E + + +I G+ + +L + +VY+WG G LG G +
Sbjct: 310 FD-------RPTRCE--FAPKDLLDICIGNQFICLLDGEGKVYSWGSNMFGELGQGIANG 360
Query: 391 RNS--PSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+ + P V+ +KDK VK + CG NF A+ W+
Sbjct: 361 QQALEPIQVDKIKDKNVKRLYCGANFVFAMG-ENWI 395
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 268 LFTWGDGDKGRLGHGDKE-AKLVP----TCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
++ WG G+LG +E K P T + ++E +ACG T + +G+VY+
Sbjct: 36 VYVWGSDTYGQLGLASREFGKSCPSPRFTSFSVVIED----IACGEEHTSFIAQNGYVYS 91
Query: 323 MGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
MG+ GQLG + P VEG L +I+CG+YH A + +++TWG+
Sbjct: 92 MGNNNQGQLGVSVDESYYKSAPTLVEG-LKGYKAVQISCGAYHTATVCDNGQLFTWGQNC 150
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
G+LG G +D+ +P +V+ LK+ ++CG T I + + G C
Sbjct: 151 EGQLGIGKSDNMTTPQIVD-LKNNLAVFVSCGKRNTMVITQTQKIFGFGDGKC 202
>gi|307105210|gb|EFN53460.1| hypothetical protein CHLNCDRAFT_136724 [Chlorella variabilis]
Length = 1660
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 144/486 (29%), Positives = 190/486 (39%), Gaps = 106/486 (21%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMD----SSLPKALESAVVLDVQNIACGGRHAA 89
D+ WG + L S GV D SLP LDV A G +HAA
Sbjct: 198 DLLAWGSAQRAPPVSMSLR---SVMGVVEDCWQHRSLPGLAPGGGHLDVYRAAVGRKHAA 254
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHP-----------------------KLIDA-- 124
LV G V+ WGE GG+LG G D D P L D
Sbjct: 255 LVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACGDDCTAALTDGGE 314
Query: 125 -----------------------LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGL 161
L + V+CG +H AV+ G L+TWG+G G
Sbjct: 315 LFMWGRLHVDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGF--GGK 372
Query: 162 LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-- 219
LGHG++ + P V+ L G V ++CG WH+A + S + + H
Sbjct: 373 LGHGDQANRAHPSLVHA-LAGRQVLEVACGVWHSAAIVSEPEGSPYAPLALAAAAHHSPL 431
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS---------SGKLFT 270
+ S G H A NS+SS S SG L+T
Sbjct: 432 KAESSAEGASAGGGGEGAGAPPASPAHLPAAAHHHRNNSTSSAFSEASVFHDGVSGALYT 491
Query: 271 WG--------------DGDKGRLGHGDKE---AKLVPTCVAALVEPNFCR-VACGHSLTV 312
WG D +KG LGHGD + +L+PT V +E R VA G LTV
Sbjct: 492 WGAVSESVAFGASEKRDSNKGCLGHGDGDLYRGQLLPTRVGGALEARQVRHVAAGSHLTV 551
Query: 313 ALTTSGHVYTMGSPVYGQLGN----PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
A+TT G V+ MG+ G G P LP V G L FV+E+ CG +H A
Sbjct: 552 AVTTGGRVFQMGA--TGASGPARHCPWEGATLPELVRGALQGYFVDELCCGMHHAAATGR 609
Query: 369 KTE-------------VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
+ + WG+G+ G+LG DD +P LVE LK + V +ACG + +
Sbjct: 610 PLDRKLGRPADHAPRAAFAWGRGSEGQLGVKGFDDSTAPVLVEGLKGRHVLQVACGGSNS 669
Query: 416 AAICLH 421
A+C H
Sbjct: 670 LAVCEH 675
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 182/357 (50%), Gaps = 26/357 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ LE+ L + A G RH+ L+ V+S G+ S G+LG P+ I ALS
Sbjct: 12 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 71
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
++I+LV+CG+ H+ AV G ++TWG G+ +G E+S ++P ++N L GI +
Sbjct: 72 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKIN-SLAGIKII 129
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVW 245
+SCG +H+ ++ GQ+F++G G LG G+ S + P++V+SL+G+ + A G
Sbjct: 130 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 189
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFC 302
H+ A+ ++G S F WG+ G+L G+ KE P + AL N
Sbjct: 190 HSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 237
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSY 361
++CG+ T LT G V+T G QL + P++ P +EG V +I CGSY
Sbjct: 238 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSY 295
Query: 362 H-VAVLTSKTEVYTWGKG--ANGRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGTN 413
H +A + + +V + G+G H + + L+ A L D +VK I G +
Sbjct: 296 HTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAH 352
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ +G LG G + K S +P + S + + ++CG H+ ++
Sbjct: 92 GRVFTWGAGS-EGQLGIGES--------KEISFMPTKINSLAGIKIIQVSCGHYHSLALS 142
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G+VFSWG G+LG G + P+ + +L + + VA G H+ A++L G +
Sbjct: 143 EDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFG 202
Query: 152 WGDG-TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG+ + L G+ + + P + G L+ ++V ISCG HT+V+T GQ+FTFG
Sbjct: 203 WGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVVYISCGYEHTSVLTEDGQVFTFGGS 261
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ L H R P+ +E + G + CG +HT A V
Sbjct: 262 SSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSYHTIAYV 301
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 123/258 (47%), Gaps = 23/258 (8%)
Query: 171 WVP-KRVNGPLE---GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
W P +R LE G+ + + G H+ ++ S ++++ GD + G LG +S P
Sbjct: 5 WAPGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRP 64
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KE 285
+++L + +CG H+ AV C G++FTWG G +G+LG G+ KE
Sbjct: 65 EPIQALSTVHIDLVSCGKEHSVAV------------CHQGRVFTWGAGSEGQLGIGESKE 112
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG--NPQADGKLPNR 343
+PT + +L +V+CGH ++AL+ G V++ GS GQLG N P +
Sbjct: 113 ISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQK 172
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEAL 400
V+ L + ++A G H L+ + WG +G+L G+ + P + AL
Sbjct: 173 VK-SLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGAL 231
Query: 401 KDKQVKSIACGTNFTAAI 418
K V I+CG T+ +
Sbjct: 232 KTLNVVYISCGYEHTSVL 249
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
+ P R+E ++ A G H +L S VY+ G + G+LG P ++
Sbjct: 10 RQPRRLEAGTGLKLLKA-ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQ 68
Query: 399 ALKDKQVKSIACGTNFTAAIC 419
AL + ++CG + A+C
Sbjct: 69 ALSTVHIDLVSCGKEHSVAVC 89
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 164/334 (49%), Gaps = 20/334 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+A +V D+ + CG H LV K G++FS+G G+LGH P +D L
Sbjct: 25 PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
NI VACG HT A G+++ WG + G LG E S ++ L V
Sbjct: 83 AHNITQVACGAQHTLAQNEWGEVFAWGSNSN--GQLGLNVEESMMPTPKMVKSLATKQVV 140
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVW 245
I+CG H+ +T+ G+++ +G + G LG G + P V+ L+G+ +CG
Sbjct: 141 QIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGAD 200
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
+ AV SG ++ WG G+LG GD + PT + +L +
Sbjct: 201 FSFAVT------------PSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR 248
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-V 363
CG T ALT G V+T G+ +YGQLG+ A+ LP +V +L + V +I CG H +
Sbjct: 249 CGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVL-ELMGTTVTQICCGRCHTL 307
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
A + SK +Y +G G +G+LG T + NSP LV
Sbjct: 308 AFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 122/240 (50%), Gaps = 24/240 (10%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ + CG HT +V G+LF+FG +G LGH ++ + P V+ L+ + ACG
Sbjct: 36 IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGA 93
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCR 303
HT A E G++F WG G+LG +E+ + P V +L +
Sbjct: 94 QHTLAQNE------------WGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQ 141
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIAC 358
+ACG S ++ALT G +Y GS +GQLG P+ L ++G + I+C
Sbjct: 142 IACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIP----ISHISC 197
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+ +T VY WGK + G+LG GDT DR P+ +++L+ ++V I CG + TAA+
Sbjct: 198 GADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 136/293 (46%), Gaps = 21/293 (7%)
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
+I V CGE HT V G L+++G Y G LGH + P V+G LE +++ +
Sbjct: 35 DIVQVGCGENHTILVMKDGKLFSFGLNDY--GQLGHCRSRTRAEP--VDG-LEAHNITQV 89
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHT 247
+CG HT G++F +G + G LG +S+ P+ V+SL + V+ ACG H+
Sbjct: 90 ACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHS 149
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE-PNFCRVAC 306
A+ V G+++ WG G+LG G C+ L++ ++C
Sbjct: 150 MALTNV------------GEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISC 197
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G + A+T SG VY G +GQLG D P +++ L V I CG H A
Sbjct: 198 GADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKS-LRFQRVTYIRCGMDHTAA 256
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT V+T+G G G+LGH + + P V L V I CG T A
Sbjct: 257 LTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAF 309
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Query: 45 GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
V G G N G G D P L+S V I CG H A + + G VF++G
Sbjct: 210 AVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAG 269
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS-GDLYTWGDGTYNFGLL 162
G+LGH ++ + P+ + L + + CG HT A S G +Y +G G G L
Sbjct: 270 MYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLG--GSGQL 327
Query: 163 GHGNEVSHWVPKRVNGPLE 181
G + + P+ V GP E
Sbjct: 328 GTKSTANVNSPQLVIGPWE 346
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 192/405 (47%), Gaps = 29/405 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+++ WG + + GG+ + S +P +SAV IACG RH +
Sbjct: 2 ELYCWGNASHGQLGLGGIEEEQ----ILTPSRIPWKPDSAV----NQIACGHRHTLFLTA 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V++ G +LGH + + P I L + I +ACG H+ A++ G +++WG
Sbjct: 54 SGKVYACGSNDYSQLGHELPTK--RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWG 111
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
D G LGH ++ ++ L V I+CG H+ +T G+L+++G +G
Sbjct: 112 DN--ECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYG 169
Query: 214 VLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LG D + + P + +L G+ ACG GN S S +F
Sbjct: 170 QLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACG------------GNHSFLISKSSAVFG 217
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YGQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQ 277
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + ++ R+ +L S + ++ACG+ H +A++ S+ +Y +G G++G+LG +T
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTK 337
Query: 390 DRNSPSLVEALKDKQVKSIACGTN-FTAAICLHKWVSGVDQSMCS 433
N P LV S +N A +H+ SG DQS+ +
Sbjct: 338 SLNLPQLVIGPWVSPSGSTLLQSNDAKIASVIHQIFSGGDQSIVT 382
>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
Length = 1058
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG GG+ + S +P ++AV Q +ACG RH +
Sbjct: 6 ELYCWG-STSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P LI L + I + CG H+ A++ G + +W
Sbjct: 57 ATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LGH + +V L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG D + P + +L G+ ACG GN S SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLV 397
P +V
Sbjct: 341 KSLMLPQVV 349
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 31/333 (9%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P I + ++ VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 154 DGTYNFGLLGHGNEVSHWVPKR---VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
Y+ ++ H +P + + L+ + I CG H+ ++ GQ+ ++GD
Sbjct: 66 SNDYS--------QLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 211 TFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGH D++ V +P+ V L V+ ACG H+ A+ S G+L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------SCGELY 165
Query: 270 TWGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 327 VYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG N + + P +++ L V +ACG LT++ V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G + + P +V L + +ACG T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P+ + + +VACGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61
Query: 321 YTMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
Y GS Y QLG+ LP + + +L + +I CGS H L+ +V +WG
Sbjct: 62 YACGSNDYSQLGH-----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 378 GANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH D + P +V L K V IACG N + A+ L+ W S +
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171
>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
Length = 1058
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 179/369 (48%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG GG+ + S +P ++AV Q +ACG RH +
Sbjct: 6 ELYCWG-STSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++ G +LGH + + P LI L + I + CG H+ A++ G + +W
Sbjct: 57 ATGKVYACGSNDYSQLGHDLPTK--RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LGH + +V L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG D + P + +L G+ ACG GN S SG +F
Sbjct: 173 GQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISKSGAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ + ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+LG T
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLV 397
P +V
Sbjct: 341 KSLMLPQVV 349
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 31/333 (9%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P I + ++ VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 154 DGTYNFGLLGHGNEVSHWVPKR---VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
Y+ ++ H +P + + L+ + I CG H+ ++ GQ+ ++GD
Sbjct: 66 SNDYS--------QLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 211 TFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGH D++ V +P+ V L V+ ACG H+ A+ S G+L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------SCGELY 165
Query: 270 TWGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 327 VYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG N + + P +++ L V +ACG LT++ V+T G GA G+LGH
Sbjct: 226 NCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G + + P +V L + +ACG T A+
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAL 317
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P+ + + +VACGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61
Query: 321 YTMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
Y GS Y QLG+ LP + + +L + +I CGS H L+ +V +WG
Sbjct: 62 YACGSNDYSQLGH-----DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 116
Query: 378 GANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH D + P +V L K V IACG N + A+ L+ W S +
Sbjct: 117 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 171
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 173/346 (50%), Gaps = 41/346 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG-GRLGHG---VDSDVLHPKLI 122
P+++ S DV ++A G RH+ V GEV+++G+ SG G+ + V+ P +
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258
Query: 123 DALSNM--NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG--------NEVSHWV 172
A +N + VACG+ H AVT SG L +WG+ FG LG G + +
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGN--EEFGQLGQGPPRDSSSKGDAKSLI 316
Query: 173 PKRVNGPLEG-------IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
+R + + + +S++CG HT +T+ G++F+FG G FG LGHGDR + +
Sbjct: 317 RRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV 376
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
PR V++L G+ + A G N S+S +SG+++TWG G G LGH D +
Sbjct: 377 PRLVDALWGVGVAQIAAG------------DNHSASLSASGRVYTWGRGKYGALGHRDVD 424
Query: 286 AKLVPTCVAALVEPNF-C-RVACG--HSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKL 340
+ PT V AL + C ++ACG H+L +A SG + G G G AD
Sbjct: 425 NRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLT 484
Query: 341 PNRVE-GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
P ++ L V +I+ GS H +T VYTWG G+LGH
Sbjct: 485 PTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGH 530
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 156/322 (48%), Gaps = 47/322 (14%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVV------------LDVQNIACGGRHAALVNKQGE 96
G + G C G S P L AV+ V +ACG RH A V G
Sbjct: 227 GEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTSGV 286
Query: 97 VFSWGEESGGRLGHGVDSD-----------------VLHPKLIDALSNMNIELVACGEYH 139
+ SWG E G+LG G D + P+L+ + ++ VACG H
Sbjct: 287 LLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGS-GHVKFTSVACGAGH 345
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T A+T +G ++++G G FG LGHG+ ++ VP+ V+ L G+ V+ I+ G H+A ++
Sbjct: 346 TLALTANGRVFSFGRGA--FGALGHGDRLNCDVPRLVDA-LWGVGVAQIAAGDNHSASLS 402
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEVMVGN 257
++G+++T+G G +G LGH D + S P V++L G+R + ACG HT A+
Sbjct: 403 ASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAI------- 455
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV--AALVEPNFCRVACGHSLTVALT 315
+ SG L WG G G G G L PT + A L + +++ G +VA+T
Sbjct: 456 ---AGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSVAVT 512
Query: 316 TSGHVYTMGSPVYGQLGNPQAD 337
G VYT G+ GQLG+ D
Sbjct: 513 EGGCVYTWGARTQGQLGHELGD 534
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 164/336 (48%), Gaps = 45/336 (13%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRV 176
P+ + +L ++ VA G H+ AVT +G++Y +GD + L + V P V
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258
Query: 177 NGPLEGI-HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG---------DRKSV--- 223
+ V++++CG H A VT++G L ++G+ FG LG G D KS+
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRR 318
Query: 224 -----SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
+PR V S ++ ACG HT A+ ++G++F++G G G
Sbjct: 319 RADASMMPRLVGS-GHVKFTSVACGAGHTLALT------------ANGRVFSFGRGAFGA 365
Query: 279 LGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG 338
LGHGD+ VP V AL ++A G + + +L+ SG VYT G YG LG+ D
Sbjct: 366 LGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDN 425
Query: 339 K-LPNRVEGKLSKSFV--EEIACGSYHVAVLTSKTE--VYTWGKGANGRLGHGDTDDRNS 393
+ P V+ L + V E+IACG H + + WG+G++G G G T D +
Sbjct: 426 RSRPTPVQA-LDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLT 484
Query: 394 PSLVE--ALKDKQVKSIACGTNFTAAI----CLHKW 423
P++++ L D++V I+ G+ + A+ C++ W
Sbjct: 485 PTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTW 520
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 186/369 (50%), Gaps = 31/369 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
++ WG T G LG G G++ + + P+ ++ + +VQ ACGG H L+ K
Sbjct: 3 LYCWG-STVHGELGLG--------GIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTK 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVL---HPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G++++ G G+LGH D++ L P+ I AL N + V+CG H+ A+T G L+
Sbjct: 54 DGKLYTCGNNDHGQLGH--DTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLF 111
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG G LGH ++ + R+ + V ISCG H +T++G+LF +G
Sbjct: 112 SWGSNAT--GQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGAN 169
Query: 211 TFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LG G K V V+SL G+ ACG GN S + SG +F
Sbjct: 170 EYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACG------------GNHSFAVSKSGAIF 217
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG G+LG D +++ PT + L ++CG +V LT G V+T G +G
Sbjct: 218 GWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFG 277
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ ++ R+ +L S + +IACG H +A + S+ +VY +G G G+LG G +
Sbjct: 278 QLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSS 337
Query: 389 DDRNSPSLV 397
N+P +V
Sbjct: 338 VSFNTPQIV 346
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 22/328 (6%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++ WG G LG G + V+ P+ +D N++ ACG HT +T G LYT G+
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 155 GTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ G LGH N + + P+ ++ LE V+ +SCG H+ +T+ GQLF++G G
Sbjct: 63 NDH--GQLGHDTNNLPNKRPQFISA-LENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 214 VLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LGH D S PR ++S+ V+ +CG H A+ +SG+LF WG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT------------NSGELFAWG 167
Query: 273 DGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G+LG G K+ T V +L +ACG + + A++ SG ++ G +GQL
Sbjct: 168 ANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G D + P +++ L V I+CG LT + V+T G G G+LGHG +
Sbjct: 228 GLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGN 286
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +V L ++ IACG T A
Sbjct: 287 EILPRMVFELMGSKITQIACGRKHTLAF 314
>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
Length = 355
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 165/329 (50%), Gaps = 22/329 (6%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G +++WG G+LG G +D P++ + N A G T A+T G L+T+G
Sbjct: 14 GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73
Query: 155 GTYNFGLLGHGNE---VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G N LGHG+ + +P+ V +G+ V + S H A VT G ++T+G GT
Sbjct: 74 GDSN--QLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTWGRGT 131
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
FG LGH + IP +V L G+R V+ ACG HT A+ + G++F W
Sbjct: 132 FGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD------------DGRVFAW 178
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+ G +G D+ P + +L ++ G + AL+ VYT G+ YGQL
Sbjct: 179 GNNKTGCVGVSDR-GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQL 237
Query: 332 GNPQADGKL--PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
G Q + P R+ L + +IACG YH+ L++ EVY WG+G G+ +
Sbjct: 238 GLGQGARYISQPTRIR-TLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKKV 296
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
D N P +++ALK+ +VK IA G + +A +
Sbjct: 297 DTNIPHVIDALKESRVKMIAAGGSHSAVV 325
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 48/358 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ WG G G LG G + D SLP+ + ++ N C A
Sbjct: 14 GYLYTWGSGQ-FGQLG---------IGTQNDESLPQ-----IAKEIDNEICTFTAAGANT 58
Query: 93 -----KQGEVFSWGEESGGRLGHGVDSD----VLHPKLIDALSNMNIELVACGEYHTCAV 143
+ G ++++G+ +LGHG D VL ++ DA +++ + + H AV
Sbjct: 59 TAAITQGGVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAV 118
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G ++TWG GT FG LGH EV +P++V G L+G+ ++CG HT +T G
Sbjct: 119 TEDGSVWTWGRGT--FGRLGH--EVHETGIPEKVPG-LDGMRFVKVACGHVHTLALTDDG 173
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G+ G +G DR + + P+E+ESL+G + + + G+ SS++
Sbjct: 174 RVFAWGNNKTGCVGVSDRGTCA-PQEIESLRGKKIIDISAGM------------ESSAAL 220
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+ +++TWG + G+LG G + A+ + PT + L ++ACG +AL+ +G V
Sbjct: 221 SAEHEVYTWGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEV 279
Query: 321 YTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
Y G + GQ N + D +P+ ++ L +S V+ IA G H AV+ K ++T G+
Sbjct: 280 YAWGQGLQGQTANEKKVDTNIPHVIDA-LKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 10/74 (13%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WG+G + G N K+D+++P +++ V+ IA GG H+A+
Sbjct: 275 AAGEVYAWGQG----LQGQTANEK------KVDTNIPHVIDALKESRVKMIAAGGSHSAV 324
Query: 91 VNKQGEVFSWGEES 104
V+ +G +F+ GEE
Sbjct: 325 VDDKGRLFTVGEEE 338
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 185/369 (50%), Gaps = 31/369 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
V+ WG T G LG G G++ + L P+ ++ VQ ACG H L+ K
Sbjct: 3 VYCWG-NTVHGELGLG--------GIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTK 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVL---HPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G++FS G G+LGH D+D L P+ I +L N + V+CG H+ A+T G ++
Sbjct: 54 DGKLFSCGNNDHGQLGH--DTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVF 111
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG + G LGH ++ + R+ + V I+ G +H+ +T++G+LF++G
Sbjct: 112 SWGSNS--IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGAN 169
Query: 211 TFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LG G + V P V+SL G+ ACG GN S + SG +F
Sbjct: 170 GYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACG------------GNHSFAVSKSGAIF 217
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG G+LG D ++ P + L ++CG + LT G V+T G+ +G
Sbjct: 218 GWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFG 277
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ ++ R+ +L S + +IACG H +A + S+ ++Y +G G G+LG G
Sbjct: 278 QLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVI 337
Query: 389 DDRNSPSLV 397
+ N+P +V
Sbjct: 338 SNYNTPQIV 346
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 168/328 (51%), Gaps = 22/328 (6%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
V+ WG G LG G D VL P+ +D + +++ ACG HT +T G L++ G+
Sbjct: 3 VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62
Query: 155 GTYNFGLLGHGNE-VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ G LGH + + + P+ ++ LE V+ +SCG H+ +T+ GQ+F++G + G
Sbjct: 63 NDH--GQLGHDTDCLPNKRPQFISS-LENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIG 119
Query: 214 VLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LGH D ++ + PR ++++ V+ A G +H+ A+ +SG+LF+WG
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALT------------NSGELFSWG 167
Query: 273 DGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G K+V PT V +L +ACG + + A++ SG ++ G +GQL
Sbjct: 168 ANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G N P +++ L V I+CG A LT + V+T G G G+LGHG +
Sbjct: 228 GLNDLVSRCFPQQLK-TLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSN 286
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +V L ++ IACG T A
Sbjct: 287 EILPRMVFELMGSKITQIACGRRHTLAF 314
>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 679
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 186/369 (50%), Gaps = 31/369 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
++ WG T G LG G G++ + + P+ ++ + +VQ ACGG H L+ K
Sbjct: 3 LYCWG-STVHGELGLG--------GIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTK 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVL---HPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G++++ G G+LGH D++ L P+ I AL N + V+CG H+ A+T G L+
Sbjct: 54 DGKLYTCGNNDHGQLGH--DTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLF 111
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG G LGH ++ + R+ + V ISCG H +T++G+LF +G
Sbjct: 112 SWGSNAT--GQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGAN 169
Query: 211 TFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LG G K V V+SL G+ ACG GN S + SG +F
Sbjct: 170 EYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACG------------GNHSFAVSKSGAIF 217
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG G+LG D +++ PT + L ++CG +V LT G V+T G +G
Sbjct: 218 GWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFG 277
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ ++ R+ +L S + +IACG H +A + S+ +VY +G G G+LG G +
Sbjct: 278 QLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSS 337
Query: 389 DDRNSPSLV 397
N+P +V
Sbjct: 338 VSFNTPQIV 346
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 22/328 (6%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++ WG G LG G + V+ P+ +D N++ ACG HT +T G LYT G+
Sbjct: 3 LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62
Query: 155 GTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ G LGH N + + P+ ++ LE V+ +SCG H+ +T+ GQLF++G G
Sbjct: 63 NDH--GQLGHDTNNLPNKRPQFISA-LENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119
Query: 214 VLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LGH D S PR ++S+ V+ +CG H A+ +SG+LF WG
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT------------NSGELFAWG 167
Query: 273 DGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G+LG G K+ T V +L +ACG + + A++ SG ++ G +GQL
Sbjct: 168 ANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G D + P +++ L V I+CG LT + V+T G G G+LGHG +
Sbjct: 228 GLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTHGN 286
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P +V L ++ IACG T A
Sbjct: 287 EILPRMVFELMGSKITQIACGRKHTLAF 314
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 171/365 (46%), Gaps = 43/365 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM----NIEL- 132
V IACG RH AL+ ++++G GRLGHG + D P + +++ +E
Sbjct: 1246 VVQIACGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFG 1305
Query: 133 ----VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
V+CG HT VT +GDLY +G G G LG G S P RV+ +++++
Sbjct: 1306 GVVDVSCGREHTMVVTGNGDLYGFGWG--EAGRLGTGETGSSLYPSRVDLR----NIAAV 1359
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+CG HT +TS G++F FG G G LG+G +P VE L+ V A G H+
Sbjct: 1360 ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSC 1419
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-AALVEPN------- 300
A+ G++ TWG G G LGHG ++ L+PT V PN
Sbjct: 1420 AL------------SRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHD 1467
Query: 301 ---FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKL-SKSFV 353
VACG T+A T G +Y G GQLG D + + E +L + S +
Sbjct: 1468 ISVVTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGI 1527
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
IACG++ AV +++ +++ WG A G D +D + V L + + IACG
Sbjct: 1528 RGIACGTFTSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAY 1586
Query: 414 FTAAI 418
AI
Sbjct: 1587 HAVAI 1591
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 143/311 (45%), Gaps = 43/311 (13%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-----PLEGIH--- 184
+ACG HT +T LYT+G G G LGHG E P V EG+
Sbjct: 1249 IACGYRHTALITDDRHLYTFGHG--ECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGG 1306
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACG 243
V +SCG HT VVT G L+ FG G G LG G+ S P V+ LR + A ACG
Sbjct: 1307 VVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD----LRNIAAVACG 1362
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A+ S G++F +G G GRLG+G + + +P V L E +
Sbjct: 1363 REHTLALT------------SKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVA 1410
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSK----------SF 352
+A G + AL+ G V T G G LG+ D L P V+G + S
Sbjct: 1411 IAAGECHSCALSRDGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISV 1470
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLG--HGDTDDRN--SPSLVEALKDKQVKSI 408
V +ACGSYH T+ +Y WG A G+LG H D SP + ++ I
Sbjct: 1471 VTSVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGI 1530
Query: 409 ACGTNFTAAIC 419
ACGT FT+A+C
Sbjct: 1531 ACGT-FTSAVC 1540
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 149/305 (48%), Gaps = 52/305 (17%)
Query: 28 DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
+GD G F WGE G LG G S + ++D + ++ +ACG H
Sbjct: 1323 NGDLYG--FGWGEA---GRLGTG-ETGSSLYPSRVD-----------LRNIAAVACGREH 1365
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+ +G VF++G GGRLG+G ++D P L++ L +I +A GE H+CA++ G
Sbjct: 1366 TLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDG 1425
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG------IH----VSSISCGPWHTAV 197
++ TWG G+ G LGHG + +P V+GP IH V+S++CG +HT
Sbjct: 1426 EVLTWGFGSS--GALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLA 1483
Query: 198 VTSAGQLFTFGDGTFGVLG--HGDRKSVSI--PREVE--SLKGLRTVRAACGVWHTAAVV 251
T+ G L+ +GD G LG H + + + P+E+ + G+R + ACG +
Sbjct: 1484 ATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGI--ACGTF------ 1535
Query: 252 EVMVGNSSSSNCSS-GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+S+ CS+ G+LF WG G D E V V L E F ++ACG
Sbjct: 1536 -------TSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAYH 1587
Query: 311 TVALT 315
VA+T
Sbjct: 1588 AVAIT 1592
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 26/193 (13%)
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-- 293
R V+ ACG HTA + + L+T+G G+ GRLGHG +E P V
Sbjct: 1245 RVVQIACGYRHTALITD------------DRHLYTFGHGECGRLGHGTEEDCTDPIPVGY 1292
Query: 294 -AALVEPN------FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVE 345
+L+ V+CG T+ +T +G +Y G G+LG + L P+RV+
Sbjct: 1293 FTSLIAAEGVEFGGVVDVSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVD 1352
Query: 346 GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQV 405
+ + +ACG H LTSK V+ +G G GRLG+G D P LVE L++ +
Sbjct: 1353 LR----NIAAVACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSI 1408
Query: 406 KSIACGTNFTAAI 418
+IA G + A+
Sbjct: 1409 VAIAAGECHSCAL 1421
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 171/366 (46%), Gaps = 28/366 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
+F WG T G LG G G++ ++ P+ + +++ IACG + V K
Sbjct: 1 MFCWG-STIHGELGLG--------GIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTK 51
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+G+V+S G G+LG L +LI + + ACG HT V G L++WG
Sbjct: 52 EGQVYSCGNNDHGQLGQEKGRKRL--QLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWG 109
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG + R+ L + I+CG H+ +T+ G+L+ +G + G
Sbjct: 110 SNVE--GQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDG 167
Query: 214 VLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG G D K P+ V SL + ACG +HT + SG +F WG
Sbjct: 168 QLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVI------------SKSGAVFAWG 215
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG D + + VP + L C ACG +V LT G V+T G+ +YGQLG
Sbjct: 216 RNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLG 275
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ ++ R +L S V +I+CG H +A++ S+ VY WG G G+LG+ +
Sbjct: 276 HGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNS 335
Query: 392 NSPSLV 397
+P +V
Sbjct: 336 TTPQVV 341
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 158/328 (48%), Gaps = 25/328 (7%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F WG G LG G D ++ P+ ++ IE +ACG+ +T AVT G +Y+ G+
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LG E + ++G ++ + +CG HT VV GQLF++G G
Sbjct: 61 NDH--GQLGQ--EKGRKRLQLISG-IDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115
Query: 215 LGHGDRKSVSI--PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG DR S +I PR V++L V+ ACG+ H+ A+ ++G+L+ WG
Sbjct: 116 LGL-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT------------NNGELYAWG 162
Query: 273 DGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G D + +L P V +L VACG T+ ++ SG V+ G +GQL
Sbjct: 163 SNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQL 222
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + +P ++ L S V ACG LT V+T G G G+LGHG+
Sbjct: 223 GLSDIQNRNVPCQLR-TLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTS 281
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
P + L V I+CG T A+
Sbjct: 282 EILPRQIMELMGSTVTQISCGRRHTLAL 309
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 19/275 (6%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ WG + LG + + + P+ VN + + I+CG +T VT GQ+++ G
Sbjct: 1 MFCWGSTIHGELGLGGIEDENIFTPREVNFE-KANEIEQIACGDNYTIAVTKEGQVYSCG 59
Query: 209 DGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+ G LG RK + + + + L +AACG HT V E G+
Sbjct: 60 NNDHGQLGQEKGRKRLQL---ISGIDPLAFRKAACGSSHTLVVNE------------WGQ 104
Query: 268 LFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
LF+WG +G+LG A + P V L ++ACG ++ALT +G +Y GS
Sbjct: 105 LFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSN 164
Query: 327 VYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG +L ++ L+ + +ACG YH V++ V+ WG+ G+LG
Sbjct: 165 SDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGL 224
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
D +RN P + L++ +V ACG F+ + +
Sbjct: 225 SDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTM 259
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACG +H ++ G V+S G G+LG D + + + ALS I VACGE
Sbjct: 87 VREVACGHKHTLVLLANGSVYSCGANDFGQLGQ--DRSMRKLEQVAALSAHEIRAVACGE 144
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A++ +G +++W G G LG G E + +V L +H+ I+CG H
Sbjct: 145 AHSLALSDAGQVFSW--GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 202
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSV---SIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + G+LF++G G LG G R S +PR V L G+ ACG H+ +
Sbjct: 203 LANNGELFSWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT--- 258
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG G+LG D+ +L PT + L V CG + T AL
Sbjct: 259 ---------PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309
Query: 315 TTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEV 372
T G V+T G+ YGQLG+ + + +P RV +L + + +++CG H VA +
Sbjct: 310 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGRL 368
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEAL 400
Y +G G +G+LG+G + P V L
Sbjct: 369 YIFGLGMSGQLGNGTLESSALPVTVPGL 396
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 24/274 (8%)
Query: 68 KALESAVVL---DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLID 123
+ LE L +++ +ACG H+ ++ G+VFSWG G+LG G + + L PK+I
Sbjct: 124 RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIK 183
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+ ++I +ACG H A+ +G+L++WG G G GNE +P+RV+ L
Sbjct: 184 KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNE---RLPRRVSH-L 239
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
G+ ++ ++CG H+ +T +G +F +G + G LG D++ P ++ L+ R
Sbjct: 240 VGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHV 299
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG HTAA+ + G +FT+G G G+LGHG K + VP V L+
Sbjct: 300 CCGENHTAALT------------ADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTA 347
Query: 301 FCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGN 333
+++CG TVA SG +Y G + GQLGN
Sbjct: 348 ISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGN 381
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 134/267 (50%), Gaps = 27/267 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALV 91
G VF WG +G LG C G + +S L PK ++ L + IACG H +
Sbjct: 154 GQVFSWG-CNRNGQLG--------C-GTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL 203
Query: 92 NKQGEVFSWGEESGGRLGHGVDS--DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
GE+FSWG + G+LG G DS + P+ + L + + LVACG H+ +T SG +
Sbjct: 204 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTV 263
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG + G LG ++ P V PL + + CG HTA +T+ G +FTFG
Sbjct: 264 FVWGRNS--CGQLGLSDQRDRLHPT-VLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 320
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GT+G LGHG + + ++PR V L G + +CG HT A SG+L+
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAP-----------QSGRLY 369
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+G G G+LG+G E+ +P V L
Sbjct: 370 IFGLGMSGQLGNGTLESSALPVTVPGL 396
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 27/331 (8%)
Query: 97 VFSWGEESGGRLG-----HGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++SWG G LG GVD++ V P+ + + VACG HT + +G +
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y+ G +FG LG + ++V L + +++CG H+ ++ AGQ+F++G
Sbjct: 107 YSCGAN--DFGQLGQDRSMRKL--EQV-AALSAHEIRAVACGEAHSLALSDAGQVFSWGC 161
Query: 210 GTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LG G + + P+ ++ L L V+ ACG H A+ ++G+L
Sbjct: 162 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA------------NNGEL 209
Query: 269 FTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
F+WG G+LG G + +P V+ LV VACG +V LT SG V+ G
Sbjct: 210 FSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRN 269
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG +L V L ++ + CG H A LT+ V+T+G G G+LGHG
Sbjct: 270 SCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG 329
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P V L + ++CG T A
Sbjct: 330 VKVNEAVPRRVVELMGTAISQLSCGRCHTVA 360
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 25/279 (8%)
Query: 149 LYTWGDGTY-NFGLL----GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
LY+WG G GL G E P+RV V ++CG HT V+ + G
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRR-FGTRAVREVACGHKHTLVLLANGS 105
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+++ G FG LG +S+ +V +L ACG H+ A+ +
Sbjct: 106 VYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGEAHSLALSD----------- 152
Query: 264 SSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+G++F+WG G+LG G ++E++L P + L + ++ACG +AL +G +++
Sbjct: 153 -AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 211
Query: 323 MGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
G GQLG + + +LP RV L + +ACG+ H LT V+ WG+ +
Sbjct: 212 WGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 270
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG D DR P++++ L+ +++K + CG N TAA+
Sbjct: 271 CGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309
>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
CCMP1335]
Length = 400
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 173/352 (49%), Gaps = 32/352 (9%)
Query: 43 GDGVLGGGLNRVGSC-FGVKMDSSLPKALESAV---VLDVQNIACGGRHAALVNKQGEVF 98
G G+ G+ + G C G + D S PK L + V VQ A GG+ ++ K G V
Sbjct: 1 GSGIASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVL 60
Query: 99 SWGEESGGRLGHGVD-----SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
S+G G LGHG D SD L P+ IDAL N + V+ GE H+ VT GD+YTWG
Sbjct: 61 SFGTAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWG 120
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+G G LG G+ H +P++V G LE VS++SCG HT VVT G++F++G G +
Sbjct: 121 EGF--CGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRY 178
Query: 213 GVLGH-----GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
GVL D P+ V++L R V + G H+ + E G
Sbjct: 179 GVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDE------------HGG 226
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN--FCRVACGHSLTVALTTSGHVYTMGS 325
L+T+G G G LGHGD + P V E N +++ G +++A++T+G VY G
Sbjct: 227 LYTFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWGK 286
Query: 326 PVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G++G D LP +V+ + ++ CG H ++ VY G
Sbjct: 287 AKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDGSVYQCG 338
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 161/357 (45%), Gaps = 40/357 (11%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV---ACGEYHTCAVTLSGDLYTWG 153
+ SWG G+ GHG DV PKL+ + +V A G + SG + ++G
Sbjct: 4 IASWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFG 63
Query: 154 DGTYNFGLLGHG----NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
T +G LGHG ++S + R L+ V +S G H+ VT+ G ++T+G+
Sbjct: 64 --TAQYGALGHGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGE 121
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLR---TVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
G G LG GDR+ +P +V +L GL +CG HT V E G
Sbjct: 122 GFCGQLGLGDRRPHLLPEQV-TLGGLEDECVSNMSCGCRHTLVVTE------------EG 168
Query: 267 KLFTWGDGDKG-----RLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
++F+WG G G L D + P V AL V+ GH ++ L G +Y
Sbjct: 169 EVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLY 228
Query: 322 TMGSPVYGQLGNPQADGK-LPNRV-EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
T GS G LG+ G+ P +V + + + + +++ G +++ +VY WGK
Sbjct: 229 TFGSGASGALGHGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWGKAK 288
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSM--CSG 434
GR+G G+ +D P V+ + D K + + +H + G+D S+ C G
Sbjct: 289 EGRIGLGNNNDICLPRKVD-VGDANFKGVDVECGY-----VHSLIIGLDGSVYQCGG 339
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
++ +DA + VS+ SG D GDV+ WGEG C +
Sbjct: 84 LRPRYIDALKNEKVICVSAGELHSGCVTAD--GDVYTWGEGF--------------CGQL 127
Query: 61 KMDSSLPKALESAVVLD------VQNIACGGRHAALVNKQGEVFSWGEESGG---RLGHG 111
+ P L V L V N++CG RH +V ++GEVFSWG G L
Sbjct: 128 GLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYGVLDALNLT 187
Query: 112 VD--SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
+D SD PKL+DAL V+ G H+ + G LYT+G G G LGHG+ V
Sbjct: 188 LDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGGLYTFGSGAS--GALGHGDLVG 245
Query: 170 HWVPKRVNGPLE-GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
P +V E + + +S G + V++ G ++ +G G +G G+ + +PR+
Sbjct: 246 QEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWGKAKEGRIGLGNNNDICLPRK 305
Query: 229 VE-SLKGLRTVRAACGVWHTAAV 250
V+ + V CG H+ +
Sbjct: 306 VDVGDANFKGVDVECGYVHSLII 328
>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2478
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 169/366 (46%), Gaps = 26/366 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-- 116
G + L K E V+DV A G H L+ GEV++ G G+ G G V
Sbjct: 250 GTRKTHCLVKPFEGREVVDV---AAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGV 306
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKR 175
L ID G HT V G + ++G YN+ G LG GN S VPK
Sbjct: 307 LTRVPIDGGRKAVQVHAYNGCEHTLVVLDDGQMMSFG---YNYRGQLGQGNTSSEPVPKP 363
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V G L GI V+ SC +H+ + G+++TFG FG LG GD +P VESL+G
Sbjct: 364 VRG-LNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQ 422
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
R ACG +HT V + +G S G D G+LG E++ V
Sbjct: 423 RITTLACGQYHT-VVSTLEIGVQSC-----------GKNDYGQLGLESTESQRKFVAVKG 470
Query: 296 LVEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL--PNRVEGKLSKSF 352
++ R V CG+ T+ LT HV+ G YGQLG ++ P +EG K
Sbjct: 471 KLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEK-H 529
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
V I+ G YH ++ + ++ +G+ +G+LG GDT++R+SP V K++ +A G
Sbjct: 530 VYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGF 589
Query: 413 NFTAAI 418
T +
Sbjct: 590 YHTIVL 595
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+PK + + V +C H+ + GEV+++G G+LG G D P L+++L
Sbjct: 360 VPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESL 419
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
I +ACG+YHT TL + + G Y G LG + S V G L+G V
Sbjct: 420 RGQRITTLACGQYHTVVSTLEIGVQSCGKNDY--GQLGLESTESQRKFVAVKGKLDGAQV 477
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGV 244
+ CG +HT V+T+ +F FG +G LG G + V P +E + R + G
Sbjct: 478 RHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEGAQEKHVYRISAGC 537
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
+HT + + G LF +G G+LG GD + P V+ + +V
Sbjct: 538 YHTVLI------------DADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKV 585
Query: 305 ACGHSLTVALT 315
A G T+ LT
Sbjct: 586 AAGFYHTIVLT 596
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 20/224 (8%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+++T G ++G LGH D + V+ +G V A G HT +
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLL------------ 279
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV----ACGHSLTVALTTSG 318
CS+G+++T G D G+ G G + V T V +V C H+L V G
Sbjct: 280 CSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEHTLVV--LDDG 337
Query: 319 HVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+ + G GQLG + +P V G L+ V + +C YH + EVYT+G+
Sbjct: 338 QMMSFGYNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYHSVIACDNGEVYTFGR 396
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
G+LG GD DR P LVE+L+ +++ ++ACG T L
Sbjct: 397 NDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLE 440
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 206/434 (47%), Gaps = 50/434 (11%)
Query: 10 RVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKA 69
RV S+ S+ S S H + VF WG+GT +G LG + + G ++ S P+
Sbjct: 613 RVRQSTTFSTLSATSSHTIVPS-TRVFAWGQGT-EGQLGHSPIQKSALTGAYVELS-PRE 669
Query: 70 LESAVVLDVQNI-----------ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
L D Q I A G ++A V + G++++WG+ S +LGHG V
Sbjct: 670 LRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYR 729
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKR 175
P+ ++AL ++ I VACG++HT A+ G L+TWG G LGHG+E PK
Sbjct: 730 PRQVEALQDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKV 789
Query: 176 VNGPLE-GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
V ++ G V S++CG HT ++T G++ T G+G +G LG+G +P VE
Sbjct: 790 VRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFD- 848
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSS-GKLFTWGDGD------KGRLGHGDKEAK 287
+VEV G++ + + GK+FTWG + G + +
Sbjct: 849 -----------EKTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSME 897
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGK 347
VP V AL VA GHS + A+T G +Y G ++ + PQ RV G+
Sbjct: 898 AVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLE---PQV-----FRV-GE 948
Query: 348 LSKSFVEEIACGSYHVAVLTSKT-EVYTWGKGANGRLGHGDTDDRNSPSLV-EALKDKQV 405
K V ++ CG H AV+T +++T+GKG++ LGHG P LV + L + V
Sbjct: 949 GDK--VWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGV 1006
Query: 406 KSIACGTNFTAAIC 419
+ACG A I
Sbjct: 1007 VKVACGHRHMAVIT 1020
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWG--EESGGRLGHGVDSDVLH----PKLIDALSNMNI 130
++ +A G ++ + G++F+WG E+ LG G+ DV P L++AL + +
Sbjct: 852 NIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKV 911
Query: 131 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK--RVNGPLEGIHVSSI 188
VA G H+ AVT G+LY WG H P+ RV EG V +
Sbjct: 912 VHVAAGHSHSAAVTEEGELYMWGMKI-------------HLEPQVFRVG---EGDKVWQV 955
Query: 189 SCGPWHTAVVTS-AGQLFTFGDGTFGVLGHGDRKSVSIPREV-ESLKGLRTVRAACGVWH 246
CG HTAVVT A QLFTFG G+ LGHG R P+ V + L G V+ ACG H
Sbjct: 956 GCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRH 1015
Query: 247 TAAVVE 252
A + +
Sbjct: 1016 MAVITD 1021
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 185/367 (50%), Gaps = 29/367 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ LE+ L + A G RH+ L+ V+S G+ S G+LG P+ I ALS
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
++I+LV+CG+ H+ AV G ++TWG G+ +G E+S ++P ++N L GI +
Sbjct: 79 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKII 136
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVW 245
+SCG +H+ ++ GQ+F++G G LG G+ S + P++V+SL+G+ + A G
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 196
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFC 302
H+ A+ ++G S F WG+ G+L G+ KE P + AL N
Sbjct: 197 HSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 244
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
++CG+ T LT G V+T G QL + G+ P +EG V +I CGSY
Sbjct: 245 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSY 302
Query: 362 H-VAVLTSKTEVYTWGKGAN--GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACG--TNF 414
H +A + + +V + G+G + H + + L+ A L D +VK I G NF
Sbjct: 303 HTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANF 362
Query: 415 TAAICLH 421
C H
Sbjct: 363 VTT-CRH 368
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/328 (32%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ +ACG +H ++ G V+S G G+LG D + + + ALS I VACGE
Sbjct: 93 VREVACGHKHTLVLLANGSVYSCGANDFGQLGQ--DRSMRKLEQVAALSAHEIRAVACGE 150
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A++ +G +++W G G LG G E + +V L +H+ I+CG H
Sbjct: 151 AHSLALSDAGQVFSW--GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLA 208
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSV---SIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + G+LF++G G LG G R S +PR V L G+ ACG H+ +
Sbjct: 209 LANNGELFSWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT--- 264
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG G+LG D+ +L PT + L V CG + T AL
Sbjct: 265 ---------PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315
Query: 315 TTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEV 372
T G V+T G+ YGQLG+ + + +P RV +L + + +++CG H VA +
Sbjct: 316 TADGGVFTFGAGTYGQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGRL 374
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEAL 400
Y +G G +G+LG+G + P V L
Sbjct: 375 YIFGLGMSGQLGNGTLESSALPVTVPGL 402
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 24/274 (8%)
Query: 68 KALESAVVL---DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLID 123
+ LE L +++ +ACG H+ ++ G+VFSWG G+LG G + + L PK+I
Sbjct: 130 RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIK 189
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L+ ++I +ACG H A+ +G+L++WG G G GNE +P+RV+ L
Sbjct: 190 KLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNE---RLPRRVSH-L 245
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
G+ ++ ++CG H+ +T +G +F +G + G LG D++ P ++ L+ R
Sbjct: 246 VGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHV 305
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG HTAA+ + G +FT+G G G+LGHG K + VP V L+
Sbjct: 306 CCGENHTAALT------------ADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTA 353
Query: 301 FCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGN 333
+++CG TVA SG +Y G + GQLGN
Sbjct: 354 ISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGN 387
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 134/267 (50%), Gaps = 27/267 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALV 91
G VF WG +G LG C G + +S L PK ++ L + IACG H +
Sbjct: 160 GQVFSWG-CNRNGQLG--------C-GTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL 209
Query: 92 NKQGEVFSWGEESGGRLGHGVDS--DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
GE+FSWG + G+LG G DS + P+ + L + + LVACG H+ +T SG +
Sbjct: 210 ANNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTV 269
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ WG + G LG ++ P V PL + + CG HTA +T+ G +FTFG
Sbjct: 270 FVWGRNS--CGQLGLSDQRDRLHPT-VLKPLRSQRIKHVCCGENHTAALTADGGVFTFGA 326
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GT+G LGHG + + ++PR V L G + +CG HT A SG+L+
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAP-----------QSGRLY 375
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+G G G+LG+G E+ +P V L
Sbjct: 376 IFGLGMSGQLGNGTLESSALPVTVPGL 402
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 154/331 (46%), Gaps = 27/331 (8%)
Query: 97 VFSWGEESGGRLG-----HGVDSD--VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++SWG G LG GVD++ V P+ + + VACG HT + +G +
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y+ G +FG LG + ++V L + +++CG H+ ++ AGQ+F++G
Sbjct: 113 YSCGAN--DFGQLGQDRSMRKL--EQV-AALSAHEIRAVACGEAHSLALSDAGQVFSWGC 167
Query: 210 GTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LG G + + P+ ++ L L V+ ACG H A+ ++G+L
Sbjct: 168 NRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA------------NNGEL 215
Query: 269 FTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
F+WG G+LG G + +P V+ LV VACG +V LT SG V+ G
Sbjct: 216 FSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRN 275
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG +L V L ++ + CG H A LT+ V+T+G G G+LGHG
Sbjct: 276 SCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG 335
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P V L + ++CG T A
Sbjct: 336 VKVNEAVPRRVVELMGTAISQLSCGRCHTVA 366
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 138/279 (49%), Gaps = 25/279 (8%)
Query: 149 LYTWGDGTY-NFGLL----GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
LY+WG G GL G E P+RV V ++CG HT V+ + G
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRR-FGTRAVREVACGHKHTLVLLANGS 111
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
+++ G FG LG +S+ +V +L ACG H+ A+ +
Sbjct: 112 VYSCGANDFGQLGQD--RSMRKLEQVAALSAHEIRAVACGEAHSLALSD----------- 158
Query: 264 SSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+G++F+WG G+LG G ++E++L P + L + ++ACG +AL +G +++
Sbjct: 159 -AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 217
Query: 323 MGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
G GQLG + + +LP RV L + +ACG+ H LT V+ WG+ +
Sbjct: 218 WGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 276
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG D DR P++++ L+ +++K + CG N TAA+
Sbjct: 277 CGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 178/358 (49%), Gaps = 24/358 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++ CG +H + G V++ G G+LGH + P+ + AL I V+ GE
Sbjct: 36 VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKPRKKPEHVVALDAQIIVAVSGGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +++WG G+ G LG N E VP+ + L + ++ ++CG H+
Sbjct: 94 SHTLALNDKGQIFSWGLGSD--GQLGLNNFEECVRVPRNIKC-LSDVQIAQVACGYRHSH 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQ+F++G FG LG G S+S P+ ++SL+G+ + + G H+ A+
Sbjct: 151 ALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + P + +L V+CG T ALT
Sbjct: 207 --------LSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTEVYT 374
G V+T G+ YGQLG+ + ++ R +L + V +I+CG H T S ++Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYS 318
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA-CGTNFTAAICLHKWVSGVDQSM 431
+G G NG+LG T +R SP+ V K V S A + C+H+ +G DQS
Sbjct: 319 FGLGGNGQLGTRSTCNRKSPAPV---KGPFVASAAPIESESEQCFCIHRIYAGGDQSF 373
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 127/249 (51%), Gaps = 24/249 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG G+ DG LG LN C V P+ ++ + + +ACG RH+ ++
Sbjct: 103 GQIFSWGLGS-DGQLG--LNNFEECVRV------PRNIKCLSDVQIAQVACGYRHSHALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K G+VFSWG+ G+LG G+ S + P++I +L + ++ G H+ A+TLSG ++
Sbjct: 154 KGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFG 213
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG + W P + L V +SCG HTA +T G +FTFG G
Sbjct: 214 WGRN--KFGQLGLNDTNDRWFPALLKS-LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGG 270
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + +CG HT A SSGK++++
Sbjct: 271 YGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTP-----------SSGKMYSF 319
Query: 272 GDGDKGRLG 280
G G G+LG
Sbjct: 320 GLGGNGQLG 328
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 158/327 (48%), Gaps = 23/327 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + V+ P+ + + V CG HT + G +YT
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTC-- 58
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LGH E P+ V L+ + ++S G HT + GQ+F++G G+ G
Sbjct: 59 GCNDLGQLGH--EKPRKKPEHVVA-LDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG + + V +PR ++ L ++ + ACG H+ A+ G++F+WG
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHAL------------SKGGQVFSWGQ 163
Query: 274 GDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + P + +L F +++ G + + A+T SG V+ G +GQLG
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N D P ++ S+ + ++CG H A LT + V+T+G G G+LGH T+
Sbjct: 224 LNDTNDRWFPALLKSLRSQRVI-YVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+P V L V I+CG T A
Sbjct: 283 INPRKVFELMGNIVTQISCGRQHTLAF 309
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 180/369 (48%), Gaps = 43/369 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ IACGG H + + G V++ G + G+LG D + ++ ++ G
Sbjct: 132 LKGIACGGAHTLFLTESGRVYATGLNNFGQLGIS-DEKRFSTEPVEVRIPKEAMHISAGY 190
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHT 195
H+C VT G+LY WG + G LG G + + V P +V+ L+GI + + G H+
Sbjct: 191 NHSCVVTADGELYMWG--VNSNGQLGLGKKSAKAVHLPTKVD-SLDGIVIKRAALGSDHS 247
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-------KSVS--IPREVESLKGLRTVRAACGVWH 246
V G++F++GDG G LGHG KS S PR ++ L+G++ A G+ H
Sbjct: 248 IAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLH 307
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+A V E +G ++ +G+ R+ G+ P+ ++ L++ VAC
Sbjct: 308 SACVDE------------NGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE--EVAC 353
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G T LT G +Y+ GS G LGN LP RVEG SKS V +++CG H A
Sbjct: 354 GGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAA 413
Query: 366 LTSKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+ S ++TWG G + G+LGHG D P+ ++ ++ +V ++CG N
Sbjct: 414 I-SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFN 472
Query: 414 FTAAICLHK 422
T AI +K
Sbjct: 473 HTGAILEYK 481
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 156/333 (46%), Gaps = 34/333 (10%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
WG GRLG G P + ++ +ACG HT +T SG +Y G NF
Sbjct: 102 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYA--TGLNNF 159
Query: 160 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG +E P V P E +H IS G H+ VVT+ G+L+ +G + G LG G
Sbjct: 160 GQLGISDEKRFSTEPVEVRIPKEAMH---ISAGYNHSCVVTADGELYMWGVNSNGQLGLG 216
Query: 219 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
+ K+V +P +V+SL G+ RAA G H+ AV + G++F+WGDG
Sbjct: 217 KKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD------------GGEVFSWGDGRS 264
Query: 277 GRLGHGDKEAKL---------VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
GRLGHG + L P + L VA G + + +G VY G
Sbjct: 265 GRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERA 324
Query: 328 YGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
++ +A+ P+ + L EE+ACG YH VLT ++Y+WG NG LG+G
Sbjct: 325 TNRVSFGEANKATTPSLISTLLD---CEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG 381
Query: 387 DTDDRNSPSLVEALKDKQ-VKSIACGTNFTAAI 418
T + P VE K V ++CG TAAI
Sbjct: 382 STSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI 414
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 138/306 (45%), Gaps = 48/306 (15%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G++++WG + +G LG G + LP ++S + ++ A G H+
Sbjct: 198 ADGELYMWGVNS-NGQLGLGKKSAKAV-------HLPTKVDSLDGIVIKRAALGSDHSIA 249
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDALSNMNIELVACGEYHTC 141
V GEVFSWG+ GRLGHG +S L P+LI L + ++ VA G H+
Sbjct: 250 VADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSA 309
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
V +G +Y +G+ N G N+ + P ++ L+ ++CG +HT V+T
Sbjct: 310 CVDENGAVYIFGERATNRVSFGEANKAT--TPSLISTLLD---CEEVACGGYHTCVLTKG 364
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSS 260
G L+++G G LG+G +P VE V + +CG HTAA+
Sbjct: 365 GDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI---------- 414
Query: 261 SNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
S G +FTWG G G+LGHG + PT + +V+CG
Sbjct: 415 ---SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGF 471
Query: 309 SLTVAL 314
+ T A+
Sbjct: 472 NHTGAI 477
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 25/180 (13%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D G V+I+GE NRV FG ++ P + + +LD + +ACGG H
Sbjct: 312 DENGAVYIFGERA--------TNRV--SFGEANKATTPSLI--STLLDCEEVACGGYHTC 359
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGD 148
++ K G+++SWG G LG+G S P+ ++ S + V+CG HT A++ G
Sbjct: 360 VLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAIS-GGA 418
Query: 149 LYTWG----------DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
++TWG DG + G LGHG++V + P +++ E + V +SCG HT +
Sbjct: 419 IFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKID-LGENVKVVQVSCGFNHTGAI 477
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 188/396 (47%), Gaps = 36/396 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT G LG G V S + PK LE+ + ++ G H+A +++
Sbjct: 44 VYTWGNGT-LGQLGHG-PVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAIDED 101
Query: 95 GEVFSWGEESGGRLGHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+++ WG +LG G S++ P+ ++AL + I V+CG+Y T AV G +Y+WG
Sbjct: 102 GKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWG 161
Query: 154 DG--TYNFGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
G T R+ L +G+ + ++ CG +HT ++ G+++ +G+
Sbjct: 162 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGN 221
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G +G LG+G+ + +P +E V A G + A+ + +G+L+
Sbjct: 222 GEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFALTD------------NGELY 269
Query: 270 TWGDGDKGRLGHGDKEA------KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
+WG + +LG G A + +P V A + ++A G+ A+T G +Y
Sbjct: 270 SWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMW 329
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
GS ++ + P+ + V+ +ACG + L+ EV+T+GKG++ L
Sbjct: 330 GSKIWIE----------PHEMTAVNEYKMVQ-VACGRQYTVALSENGEVFTFGKGSSNCL 378
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
GHGD ++ P +EAL D + SI+CG AI
Sbjct: 379 GHGDRKNQLQPVQIEALADVNITSISCGDYHMGAIA 414
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 151/313 (48%), Gaps = 43/313 (13%)
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHG--------NEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A + +YTWG+GT G LGHG N PK + EG ++ + G
Sbjct: 37 AFSTQSSVYTWGNGT--LGQLGHGPVVKSGIRNAYEELTPKLLEA-FEGKAITHVEFGAS 93
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSV-SIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+A + G+L+ +G + LG G+ + ++PREVE+LKG++ V +CG + TAAV
Sbjct: 94 HSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAV-- 151
Query: 253 VMVGNSSSSNCSSGKLFTWGDGD---KGRLGHGDKEAKLVPT--CVAALVEPN--FCRVA 305
+ GK+++WG G KG G G K PT + LV+ V
Sbjct: 152 ----------DADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVE 201
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVA 364
CG TVAL+ G ++ G+ YG+LGN ++D ++P +E SK V IA G
Sbjct: 202 CGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFSF 260
Query: 365 VLTSKTEVYTWGKGANGRLGHG-----DTDDRNS-PSLVEALKDKQVKSIACGTNFTAAI 418
LT E+Y+WG + +LG G D + S P LVEA VK IA G + AA+
Sbjct: 261 ALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAV 320
Query: 419 C----LHKWVSGV 427
L+ W S +
Sbjct: 321 TDDGRLYMWGSKI 333
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 181/381 (47%), Gaps = 60/381 (15%)
Query: 6 MDAFRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
++AF A++ G+ H D G +++WG +++G +M++
Sbjct: 77 LEAFE---GKAITHVEFGASHSAAIDEDGKLYVWGSNE--------YSKLGLGESSEMET 125
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG-----EESGGRLGHGVDSDVLHP 119
LP+ +E+ + + +++CG A V+ G+++SWG + G LGH D P
Sbjct: 126 -LPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTP 184
Query: 120 KLIDALSNMNIEL--VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
+L+ L + + + V CGE+HT A++ G+++ WG+G Y G LG+G + VP+
Sbjct: 185 RLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEY--GRLGNGESDTCEVPE--- 239
Query: 178 GPLEGI---HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------SIPRE 228
P+E +V SI+ G + +T G+L+++G + LG G ++ SIP
Sbjct: 240 -PIEFFSKDNVVSIAAGRDFSFALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVL 298
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
VE+ GL + A G H AAV + G+L+ WG + +
Sbjct: 299 VEAFNGLSVKQIAAGYDHAAAVTD------------DGRLYMWG-----------SKIWI 335
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGK 347
P + A+ E +VACG TVAL+ +G V+T G LG+ +L P ++E
Sbjct: 336 EPHEMTAVNEYKMVQVACGRQYTVALSENGEVFTFGKGSSNCLGHGDRKNQLQPVQIEA- 394
Query: 348 LSKSFVEEIACGSYHVAVLTS 368
L+ + I+CG YH+ + +
Sbjct: 395 LADVNITSISCGDYHMGAIAT 415
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 302 CRVACGHSLTV------ALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG---KLSKS 351
CR + SL A +T VYT G+ GQLG+ P + N E KL ++
Sbjct: 20 CRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEA 79
Query: 352 F----VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVK 406
F + + G+ H A + ++Y WG +LG G++ + + P VEALK ++
Sbjct: 80 FEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIV 139
Query: 407 SIACGTNFTAAI 418
++CG FTAA+
Sbjct: 140 DVSCGDYFTAAV 151
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 197/420 (46%), Gaps = 33/420 (7%)
Query: 3 AMAMDAFRVSLSSAVSSSSQGSGHDDGDALG-DVFIWGEGTGDGVLGGGLNRVGSCFGVK 61
AM + VSLS + S + D DV+ WG + + G +++
Sbjct: 253 AMILMEQVVSLSEEYAISCTETATKSVDMNNCDVYAWGSNSSHQLAELGSDKI------- 305
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
PK ++S + Q + G V+ G V S G+ S GRLG G ++ K
Sbjct: 306 ---VFPKKVKS--FGNSQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKT 360
Query: 122 IDALSNMNIELVACG---EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
I I ++ + HT A+T G +++WGDG Y G LGHG+ ++H PK + G
Sbjct: 361 IVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGDGDY--GKLGHGSSLTHKSPKIIEG 418
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
PL V +S G H+A VT GQLFT+G+G +G LG GD S ++P V+ + +V
Sbjct: 419 PLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAGSV 478
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
CG HT + + ++++G GD G+LGHGD P + ++
Sbjct: 479 --VCGSSHTLVLAQ-----------DGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESING 525
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
F ++ G ++AL SG V++ G G+P A P ++ +L+ + V +I
Sbjct: 526 MMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDATFMKPTLID-ELTFTRVVDITS 584
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAA 417
G H LT EVY WG A G+ G G T+ S P+ V+ L + + I+ GT+ + A
Sbjct: 585 GDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSPISVPTQVQQLNNVTIHQISAGTSHSIA 644
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 144/326 (44%), Gaps = 41/326 (12%)
Query: 133 VACGEYHTCAVTLSG-DLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
++C E T +V ++ D+Y WG + ++ LG V PK+V +
Sbjct: 269 ISCTETATKSVDMNNCDVYAWGSNSSHQLAELGSDKIV---FPKKVKSFGNS---QMLEA 322
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVW 245
G + T V+ G + + G G++G LG GD + S + + ++++ + + + + G
Sbjct: 323 GQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDG-- 380
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRV 304
HT A+ + G +F+WGDGD G+LGHG P + L V
Sbjct: 381 HTLALT------------TEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCV 428
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
+ G+ + +T G ++T G YG+LG +P V+ S + CGS H
Sbjct: 429 SAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAG---SVVCGSSHT 485
Query: 364 AVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI---- 418
VL V+++G G NG+LGHGDT P ++E++ + G+ ++ A+
Sbjct: 486 LVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSG 545
Query: 419 CLHKWVSGVDQSMCSGCRLPFNNFKR 444
+ W G C GC P F +
Sbjct: 546 QVFSWGCGA----CLGCGSPDATFMK 567
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 171/356 (48%), Gaps = 44/356 (12%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+A H + EV WG +G ++V+ P + L+N+ + +AC E
Sbjct: 452 LAAHTHHFSFQGSLQEVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRF 506
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVV 198
++ +G +YT YN L P+ V G L ++ I+ H +
Sbjct: 507 LILSRNGRVYT---QAYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLAL 553
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVM 254
+ G+++++G G G LGHGD + P+ + + G + V ACG ++AA+
Sbjct: 554 AATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--- 610
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
+ G+L+TWG G+ GRLGHG E + +P VA L VACG + T+
Sbjct: 611 ---------AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 661
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
A+T +G V++ G YG+LG +DG K P +E KL V ++ CGS LT +
Sbjct: 662 AVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQ 720
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
VY+WGKG N RLGHG + P L+E L+ K+V +A G+ A+ +H W
Sbjct: 721 VYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 776
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 142/307 (46%), Gaps = 41/307 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 542 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 594
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 595 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 649
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 650 DVACGSGDAQTLAVTDNGQVWSWGDGDY--GKLGRGGSDGCKTPKLIE-KLQDLDVVKVR 706
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 707 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 766
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 767 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 814
Query: 310 LTVALTT 316
+ A ++
Sbjct: 815 QSFAWSS 821
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 185/367 (50%), Gaps = 29/367 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ LE+ L + A G RH+ L+ V+S G+ S G+LG P+ I ALS
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 229
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
++I+LV+CG+ H+ AV G ++TWG G+ +G E+S ++P ++N L GI +
Sbjct: 230 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKII 287
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVW 245
+SCG +H+ ++ GQ+F++G G LG G+ S + P++V+SL+G+ + A G
Sbjct: 288 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 347
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFC 302
H+ A+ ++G S F WG+ G+L G+ KE P + AL N
Sbjct: 348 HSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 395
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
++CG+ T LT G V+T G QL + G+ P +EG V +I CGSY
Sbjct: 396 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSY 453
Query: 362 H-VAVLTSKTEVYTWGKGAN--GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACG--TNF 414
H +A + + +V + G+G + H + + L+ A L D +VK I G NF
Sbjct: 454 HTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANF 513
Query: 415 TAAICLH 421
C H
Sbjct: 514 VTT-CRH 519
>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
Length = 725
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 132/245 (53%), Gaps = 19/245 (7%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ V +IACG H+A + G V +WG+ GRLGHG D L PKL++AL +AC
Sbjct: 1 MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
G+ T +T ++++WGDG Y G LG G +P ++ L G+ V + CG
Sbjct: 61 GSGDAQTLCITDDDNVWSWGDGDY--GKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQ 117
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+ +T +G ++T+G G F LGHG V P++V +L+G + + A G H A
Sbjct: 118 FSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVA---- 173
Query: 254 MVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
CS SG+++TWGD D+G+LG G A P VAAL + +V CG + T+
Sbjct: 174 ---------CSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTL 224
Query: 313 ALTTS 317
AL+TS
Sbjct: 225 ALSTS 229
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 121/239 (50%), Gaps = 16/239 (6%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V+ I+CG H+A +T++G + T+G G +G LGHGD + P+ VE+L G R + AC
Sbjct: 1 MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60
Query: 243 GVWHTAAVVEVMVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
G + + C +++WGDGD G+LG G + +P + +L
Sbjct: 61 G------------SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG 108
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACG 359
+V CG +VALT SG VYT G + +LG+ D + P +V K + IA G
Sbjct: 109 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII-SIATG 167
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S H + EVYTWG G+LG G P LV AL+ K + + CG+ T A+
Sbjct: 168 SLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 226
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 117/243 (48%), Gaps = 17/243 (6%)
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
M++ +ACG H+ A+T SG + TWG G Y G LGHG+ PK V L G
Sbjct: 1 MSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEA-LLGYRAID 57
Query: 188 ISCGP--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
I+CG T +T ++++GDG +G LG G +P ++ESL GL V+ CG
Sbjct: 58 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQ 117
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
+ A+ + SG ++TWG GD RLGHG + P VAAL +A
Sbjct: 118 FSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIA 165
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G VA + SG VYT G GQLG+ R+ L + ++ CGS H
Sbjct: 166 TGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLA 225
Query: 366 LTS 368
L++
Sbjct: 226 LST 228
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 37 IWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGE 96
+W G GD G L R GS G K LP +ES L V + CG + + + K G
Sbjct: 76 VWSWGDGDY---GKLGRGGSD-GCK----LPYKIESLAGLGVVKVECGSQFSVALTKSGA 127
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V++WG+ RLGHG V PK + AL I +A G H A + SG++YTWGD
Sbjct: 128 VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDN- 186
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ G LG G + P+ V L+G H+ ++CG HT ++++
Sbjct: 187 -DEGQLGDGTVTAIQRPRLV-AALQGKHIVKVTCGSAHTLALSTS 229
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
V +IACGS H A +T+ V TWGKG GRLGHGD++D+ P LVEAL + IACG+
Sbjct: 3 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62
Query: 413 NFTAAICLHK------WVSG----VDQSMCSGCRLPFN 440
+C+ W G + + GC+LP+
Sbjct: 63 GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYK 100
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 185/367 (50%), Gaps = 29/367 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ LE+ L + A G RH+ L+ V+S G+ S G+LG P+ I ALS
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 229
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
++I+LV+CG+ H+ AV G ++TWG G+ +G E+S ++P ++N L GI +
Sbjct: 230 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKII 287
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVW 245
+SCG +H+ ++ GQ+F++G G LG G+ S + P++V+SL+G+ + A G
Sbjct: 288 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 347
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFC 302
H+ A+ ++G S F WG+ G+L G+ KE P + AL N
Sbjct: 348 HSFAL--SLMGTS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 395
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
++CG+ T LT G V+T G QL + G+ P +EG V +I CGSY
Sbjct: 396 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEG--IGGHVSQIECGSY 453
Query: 362 H-VAVLTSKTEVYTWGKGAN--GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACG--TNF 414
H +A + + +V + G+G + H + + L+ A L D +VK I G NF
Sbjct: 454 HTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANF 513
Query: 415 TAAICLH 421
C H
Sbjct: 514 VTT-CRH 519
>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
Length = 1031
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/349 (32%), Positives = 178/349 (51%), Gaps = 28/349 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+++ A G RH+ L+ G V S G+ S G+LG PK I AL + +ELV+CG
Sbjct: 35 ELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCG 94
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E++ +P+++ L GI + +SCG +H+
Sbjct: 95 KEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEIN-LIPQKIKT-LTGIKIIQVSCGNYHSL 152
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQ+F++G + G LG G + S + P+ V SL G+ + A G H+ A+
Sbjct: 153 ALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFAL----- 207
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
SG F WG + G+L G P V+AL ++CGH T
Sbjct: 208 -------SLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTA 260
Query: 313 ALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKT 370
LT +G V+T G GQLG+ P A+ P +EG + V +I CGSYH +A + +
Sbjct: 261 VLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTTG 318
Query: 371 EVYTWGKGANGR--LGHGD--TDDRNSPSLV--EALKDKQVKSIACGTN 413
+V ++G+G + + H + T++ + L+ E L D QVK I GT+
Sbjct: 319 QVVSFGRGPSCKSCSNHPELLTENTDVTCLISAERLVDVQVKHIFAGTH 367
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + G +++ GD + G LG PK + LE + V +SCG
Sbjct: 40 ASGERHSLLLLSDGAVHSCGDNSR--GQLGRRGLQREEQPKPIQA-LETLRVELVSCGKE 96
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K ++ IP+++++L G++ ++ +CG +H+ A+ E
Sbjct: 97 HSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSE 156
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
G++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 157 ------------DGQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHS 204
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ SG + GS GQL N P V L V I+CG H AVLT
Sbjct: 205 FALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSA-LKTLGVVYISCGHEHTAVLT 263
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G + G+LGH T ++ P L+E + + V I CG+ T A
Sbjct: 264 QNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGI-EGLVSQIDCGSYHTLA 312
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDAL 125
PK +++ L V+ ++CG H+ V +G VF+WG S G+LG G ++ L P+ I L
Sbjct: 77 PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL 136
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+ + I V+CG YH+ A++ G +++WG ++ G LG G E+ S P+RV L+GI
Sbjct: 137 TGIKIIQVSCGNYHSLALSEDGQVFSWGSNSH--GQLGLGKELPSQASPQRVRS-LDGIP 193
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGD---GTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G G G PR V +LK L V +
Sbjct: 194 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYIS 253
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + +GK+FT+GD G+LGH K P + +E
Sbjct: 254 CGHEHTAVLTQ------------NGKVFTFGDNSCGQLGHSPTAEKTGPQLMEG-IEGLV 300
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ CG T+A + T+G V + G
Sbjct: 301 SQIDCGSYHTLAYVYTTGQVVSFG 324
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ RV L S S + G VF WG G+ +G LG G K +
Sbjct: 82 ALETLRVELVSCGKEHSLAVCYK-----GRVFAWGAGS-EGQLGIG--------EFKEIN 127
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+P+ +++ + + ++CG H+ +++ G+VFSWG S G+LG G + P+ +
Sbjct: 128 LIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVR 187
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++LSG + WG G V + P+ V+ L+
Sbjct: 188 SLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSA-LKT 246
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD + G LGH + P+ +E ++GL + + C
Sbjct: 247 LGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVS-QIDC 305
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 306 GSYHTLAYV 314
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ S G + + GD + G LG + P+ +++L+ LR +
Sbjct: 33 GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE L+P + L
Sbjct: 93 CGKEHSLAV------------CYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIK 140
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CG+ ++AL+ G V++ GS +GQLG +LP++ + +S + ++
Sbjct: 141 IIQVSCGNYHSLALSEDGQVFSWGSNSHGQLG---LGKELPSQASPQRVRSLDGIPLAQV 197
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD---DRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG G+L ++ P V ALK V I+CG
Sbjct: 198 AAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHE 257
Query: 414 FTAAI 418
TA +
Sbjct: 258 HTAVL 262
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG G L GS V + S P+++ +
Sbjct: 194 LAQVAAGGAHSFALSLSGTSFGWGSNNA-----GQLAFFGS--NVPVQSYKPRSVSALKT 246
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ S G+LGH ++ P+L++ + + + + C
Sbjct: 247 LGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL-VSQIDC 305
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 306 GSYHTLAYVYTTGQVVSFGRG 326
>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
Length = 1365
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 185/397 (46%), Gaps = 41/397 (10%)
Query: 29 GDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA 88
G+ ++F WG G LG G +++G + V P+ + ++ ++CG HA
Sbjct: 78 GNWYTEIFSWGSDQA-GQLGLGQSQIGKSYPV------PRYC--TYNIGIKYVSCGDEHA 128
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLS 146
A + V+S G + G+LG G S + P L++AL + +ACG HT T
Sbjct: 129 AFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPISIACGANHTLVCTER 188
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS----ISCGPWHTAVVTSAG 202
GD+Y+WG G FG LG GN ++PK ++ + + S +S G +A++ +G
Sbjct: 189 GDVYSWGQGI--FGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSG 246
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+++T G G LG G R +IP ++ R ACG H + +
Sbjct: 247 RVYTCGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLMLTK---------- 295
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVY 321
G +++ G G+LG +K P + + VA G S + +++ SG +Y
Sbjct: 296 --QGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAG-SFSASISYDSGDLY 352
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
GS V+G+ P+RV K K ++ G++ + VY+WG +G
Sbjct: 353 LWGSGVFGEF-------LTPHRV--KTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSG 403
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG GD D+R +P ++ L DK V ++CG NF+ A+
Sbjct: 404 ELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIAL 440
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/354 (31%), Positives = 174/354 (49%), Gaps = 40/354 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD-VQNIACGGRHAALV 91
G ++IWG+G G R+G FG + + LP + LD +++ A GG H+ +
Sbjct: 109 GKLWIWGKGDG--------GRLG--FGQEYPAFLPTLNPN---LDSIRSTALGGVHSVAL 155
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G+VF+WG G LGH V L P++++ N I +A HT A+T SG+LYT
Sbjct: 156 SSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYT 215
Query: 152 W----GDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
W GDG G NE +P +V + V+++SCG + T V+T GQL+
Sbjct: 216 WGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKA--LPVPVAAVSCGGFFTMVLTQEGQLWN 273
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G + LG GD+ P+ + SL+ +R ++ A G +H+ A+ + G
Sbjct: 274 WGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTD------------DG 321
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
K+ +WG G G+LGH E + +PT + AL + + +ACG S + A+T +G +Y G+
Sbjct: 322 KVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNA 381
Query: 327 VYGQLGNPQADGKLPNRVEGK-------LSKSFVEEIACGSYHVAVLTSKTEVY 373
QLG P P VE K L V +A G+ H L S ++
Sbjct: 382 KDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLVSSLCLF 435
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 173/370 (46%), Gaps = 53/370 (14%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL-----------------------SNMNIEL 132
++ SWG + G+LG G++ L+P + L S +
Sbjct: 36 QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG +H+ V + G L+ WG G + G LG G E ++P +N L+ I S + G
Sbjct: 96 ISCGLFHSSLV-VDGKLWIWGKG--DGGRLGFGQEYPAFLPT-LNPNLDSIR--STALGG 149
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+ ++S GQ+FT+G G FG LGH +PR VE + A HTAA+ E
Sbjct: 150 VHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITE 209
Query: 253 VMVGNSSSSNCSSGKLFTWG-DGDKGRLGHG------DKEAKLVPTCVAALVEPNFCRVA 305
SG+L+TWG D GRLG G + +P+ V AL P V+
Sbjct: 210 ------------SGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVP-VAAVS 256
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
CG T+ LT G ++ G+ +LG G + L + +IA G YH
Sbjct: 257 CGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLA 316
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LH 421
LT +V +WG G +G+LGH +++ P+++EAL D+ V IACG + +AAI L+
Sbjct: 317 LTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLY 376
Query: 422 KWVSGVDQSM 431
W + D +
Sbjct: 377 MWGNAKDSQL 386
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 199/442 (45%), Gaps = 52/442 (11%)
Query: 8 AFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP 67
+F +S++VS+ +D + WG G G LGGG+ + LP
Sbjct: 10 SFMRRMSTSVSAPLLWKAENDAVTTVQLLSWGRGA-SGQLGGGIEEMRLYPSPVATLHLP 68
Query: 68 KA--------------LESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD 113
+ +E+A L I+CG H++LV G+++ WG+ GGRLG G +
Sbjct: 69 PSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLV-VDGKLWIWGKGDGGRLGFGQE 127
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
P L L + I A G H+ A++ G ++TWG G FG LGH +P
Sbjct: 128 YPAFLPTLNPNLDS--IRSTALGGVHSVALSSLGQVFTWGYG--GFGALGHSVYHRELLP 183
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG----DGTFGV---LGHGDRKSVSIP 226
+ V G + I+ HTA +T +G+L+T+G DG G+ G + +SIP
Sbjct: 184 RMVEGSWNA-KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIP 242
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
+V++L + +CG + T + + G+L+ WG LG GDK
Sbjct: 243 SKVKALP-VPVAAVSCGGFFTMVLTQ------------EGQLWNWGANSNYELGRGDKVG 289
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVE 345
P + +L + ++A G ++ALT G V + G +GQLG+ + K+P +E
Sbjct: 290 GWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIE 349
Query: 346 GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG-HGDTDDRNSPSLVEALKD-- 402
L+ V IACG A +T ++Y WG + +LG G + + P V+ L +
Sbjct: 350 -ALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDD 408
Query: 403 ----KQVKSIACGTNFTAAICL 420
V S+A G + A+CL
Sbjct: 409 RLGPHNVLSVAVGASH--AMCL 428
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 178/383 (46%), Gaps = 53/383 (13%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-------GVDSDVLH 118
LP+ + + + + ++ +ACGG H A V+ G V++WG G+LGH G+ +V
Sbjct: 27 LPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVGLPGEVAM 86
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P+ + ALS G YHT V SG + W G G LG G +V R+
Sbjct: 87 PERVVALS--------AGYYHTLCVGESGSV--WSFGCNGKGQLGLGKDVVLVREPRLVK 136
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD---RKSVS-----IPREVE 230
L+ V +++ G H+ +T+ G+++++G+ G LGHG R+ +PR V
Sbjct: 137 SLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFLPRLVR 196
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+ + LR + + G H+AAV ++G F WG G +LG G E P
Sbjct: 197 AFEALRVEQVSAGQMHSAAV------------STAGDAFLWGYGKFHQLGFGSDEDLAGP 244
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK 350
T + L + + VACG ++AL GHV G+ G LG + P R K+
Sbjct: 245 TVLPPL-KGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPS-KVPG 302
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWG--------------KGANGRLGHGDTDDRNSPSL 396
E+IA G H A +T ++YTWG G G+LGHG+ D SP
Sbjct: 303 VSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHH 362
Query: 397 VEALKDKQVKSIACGTNFTAAIC 419
V+ L + +ACG N TAAI
Sbjct: 363 VDWLSLTETDLVACGMNHTAAIV 385
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 143/284 (50%), Gaps = 35/284 (12%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
L T+G+G + G LGH E + RV L G+ + +++CG HTA V +G ++T+G
Sbjct: 5 LATFGNG--DCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWG 62
Query: 209 DGTFGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G LGH S V +P EV + R V + G +HT V E SG
Sbjct: 63 LNDKGQLGHDSEDSEVGLPGEVAMPE--RVVALSAGYYHTLCVGE------------SGS 108
Query: 268 LFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
++++G KG+LG G K+ LV P V +L + VA G ++ALT G VY+ G+
Sbjct: 109 VWSFGCNGKGQLGLG-KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGN 167
Query: 326 PVYGQLGNPQADGKLPNRVEG-------KLSKSF----VEEIACGSYHVAVLTSKTEVYT 374
G+LG+ A P R+ G +L ++F VE+++ G H A +++ + +
Sbjct: 168 AANGRLGHGSAT---PRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFL 224
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG G +LG G +D P+++ LK ++ACG+ + A+
Sbjct: 225 WGYGKFHQLGFGSDEDLAGPTVLPPLKGS-TAAVACGSLHSLAL 267
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 21/240 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG +G LG G FG ++ LP+ + + L V+ ++ G H+A V+
Sbjct: 160 GEVYSWGNAA-NGRLGHGSATPRRLFGSSIEF-LPRLVRAFEALRVEQVSAGQMHSAAVS 217
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+ F WG +LG G D D+ P ++ L + VACG H+ A+ G + W
Sbjct: 218 TAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKG-STAAVACGSLHSLALQYGGHVLAW 276
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---- 208
G T G+LG G+E PKR + + G+ I+ G H+A VT +G+L+T+G
Sbjct: 277 G--TNQNGVLGQGHEKQQ-QPKRPS-KVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGS 332
Query: 209 ----------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
GT G LGHG+ P V+ L T ACG+ HTAA+VE+ G S
Sbjct: 333 QGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVELDSGVS 392
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 173/338 (51%), Gaps = 25/338 (7%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H ++V + G+++ +G + G+LG G + V P + AL ++L ACG H
Sbjct: 39 HISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNH 98
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G++Y G + G LG G+ ++ + + ++ G + +AV+T
Sbjct: 99 TLICTEQGNVYAAGGNSE--GQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLT 156
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQL +GD + G +G GD+ VS+P +V+ K + + +CG +H+A + +
Sbjct: 157 EDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQ------- 207
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G+L+T+G+ + G+LG K+ K +P V+ + +VACG TV L
Sbjct: 208 -----DGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG-ISGKVSKVACGGGHTVVL-AE 260
Query: 318 GHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G YGQLG+ + P V+ L K + IACG H A++T +YT+
Sbjct: 261 GDVYTFGLGQYGQLGHGTFVFETSEPKTVD-HLGKHKICHIACGENHTALITENGLMYTF 319
Query: 376 GKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G G +G+LG G+ + N P+L V S+ACG
Sbjct: 320 GDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACG 357
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 147/290 (50%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT +G LY +G + N+G LG G++ + P V L+ V +CG
Sbjct: 40 ISCGDEHTSVVTENGKLYMFG--SNNWGQLGFGSKNAVNKPTCVKA-LKPEKVKLAACGR 96
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT + T G ++ G + G LG GD + S + ++ +T+AV+
Sbjct: 97 NHTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVL- 155
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G+L WGD +G++G GDK VP V + +P C ++CG+ +
Sbjct: 156 ----------TEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVD-IGKPVSC-ISCGYYHSA 203
Query: 313 ALTTSGHVYTMGSPVYGQLG-NPQA--DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+T G +YT G P G+LG +P+ + KLP V G K V ++ACG H VL ++
Sbjct: 204 LITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGK--VSKVACGGGHTVVL-AE 260
Query: 370 TEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+VYT+G G G+LGHG + + P V+ L ++ IACG N TA I
Sbjct: 261 GDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALI 310
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 155/319 (48%), Gaps = 29/319 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
FG K + P +++ V+ ACG H + +QG V++ G S G+LG G +
Sbjct: 69 FGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEGQLGLGDTEERS 128
Query: 118 HPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
LI + + I+ +A G Y + +T G L WGD + G +G G++ VP +V
Sbjct: 129 TFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSE--GQIGLGDKAYVSVPHQV 186
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKG 234
+ G VS ISCG +H+A++T G+L+TFG+ G LG + K+ +P+ V + G
Sbjct: 187 DI---GKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG 243
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCV 293
+ + ACG HT + E G ++T+G G G+LGHG + P V
Sbjct: 244 -KVSKVACGGGHTVVLAE-------------GDVYTFGLGQYGQLGHGTFVFETSEPKTV 289
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF- 352
L + C +ACG + T +T +G +YT G +G+LG + N+ L +F
Sbjct: 290 DHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLG--LGEENYTNQFVPTLCSNFL 347
Query: 353 ---VEEIACGSYHVAVLTS 368
V +ACG H+ V S
Sbjct: 348 RFIVHSVACGGCHMLVFAS 366
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 18/190 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G + +WG+ + +G +G G K S+P ++ + V I+CG H+AL+
Sbjct: 159 GQLVMWGDNS-EGQIG---------LGDKAYVSVPHQVD--IGKPVSCISCGYYHSALIT 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ GE++++GE G+LG H P+L+ +S + VACG HT V GD+Y
Sbjct: 207 QDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISG-KVSKVACGGGHT-VVLAEGDVY 264
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
T+G G Y G LGHG V + L + I+CG HTA++T G ++TFGDG
Sbjct: 265 TFGLGQY--GQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDG 322
Query: 211 TFGVLGHGDR 220
G LG G+
Sbjct: 323 RHGKLGLGEE 332
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
I+CG H +V+T ++Y +G G+LG G + N P+ V+ALK ++VK ACG N T
Sbjct: 40 ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99
Query: 416 AAICLHK 422
IC +
Sbjct: 100 -LICTEQ 105
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 13 LSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
+S VS + G GH A GDV+ +G G G LG G ++S PK ++
Sbjct: 241 ISGKVSKVACGGGHTVVLAEGDVYTFGLGQY-GQLGHGT--------FVFETSEPKTVDH 291
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNMNI 130
+ +IACG H AL+ + G ++++G+ G+LG G + ++ P L +
Sbjct: 292 LGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIV 351
Query: 131 ELVACGEYH 139
VACG H
Sbjct: 352 HSVACGGCH 360
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/300 (33%), Positives = 155/300 (51%), Gaps = 33/300 (11%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH----VSSIS 189
ACG+ HT A+T G +Y+WG G LGHGN S +PK ++ PL I+ +++I+
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCAN---GALGHGNSKSQLLPKALDRPL--IYSMPSITTIA 58
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG +HT V G L+T+G +G LGHGD K+ +PR VE+L+ ++AA G H+
Sbjct: 59 CGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLV 118
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGH 308
+ E + K++ +G G+LG K + P V+ L C + CG+
Sbjct: 119 LTE------------ANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGY 166
Query: 309 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
S ++AL S +Y+ G GQLG +P + KS V++I+CG H
Sbjct: 167 SHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLT-MFKKSQVQQISCGYDHNIAFV 225
Query: 368 SK---------TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
S+ +VYTWG+G G+LGH + R P +V+ L + ++++A G +AAI
Sbjct: 226 SEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAI 285
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 154/319 (48%), Gaps = 29/319 (9%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID---ALSNMNIELVACGEY 138
ACG H + ++G V+SWG +G LGHG L PK +D S +I +ACGE+
Sbjct: 4 ACGKLHTVALTEEGRVYSWGCANGA-LGHGNSKSQLLPKALDRPLIYSMPSITTIACGEF 62
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
HT AV G L+TWG Y G LGHG+ +H +P+RV + I + + + G H+ V+
Sbjct: 63 HTLAVGQDGTLWTWGRNQY--GQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQ-HSLVL 119
Query: 199 TSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
T A +++ FG FG LG + K + P V L+ CG H+ A+++
Sbjct: 120 TEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLK----- 174
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
S +L++WG D G+LG G + VP + + +++CG+ +A +
Sbjct: 175 -------SEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227
Query: 318 ---------GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
VYT G GQLG+ + + +V L + +A G + A +
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDE 287
Query: 369 KTEVYTWGKGANGRLGHGD 387
++YTWG G+LGHGD
Sbjct: 288 AKQLYTWGCSREGQLGHGD 306
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 19/304 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD---VQNIACGGRHAA 89
G V+ WG +G LG G ++ LPKAL+ ++ + IACG H
Sbjct: 17 GRVYSWG--CANGALGHGNSK---------SQLLPKALDRPLIYSMPSITTIACGEFHTL 65
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
V + G +++WG G+LGHG P+ ++AL A G H+ +T + +
Sbjct: 66 AVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKV 125
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y +G FG LG ++V + + L V I+CG H+ + + QL+++G
Sbjct: 126 YAFGSNV--FGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGR 183
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG G +S +P + K + + +CG H A V G K++
Sbjct: 184 NDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPP---LEKVY 240
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG G++G+LGH + ++ VP V L+ VA G + A+ + +YT G G
Sbjct: 241 TWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREG 300
Query: 330 QLGN 333
QLG+
Sbjct: 301 QLGH 304
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV---A 294
V AACG HT A+ E G++++WG + G LGHG+ +++L+P +
Sbjct: 1 VGAACGKLHTVALTE------------EGRVYSWGCAN-GALGHGNSKSQLLPKALDRPL 47
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFV 353
P+ +ACG T+A+ G ++T G YGQLG+ KLP RVE L K
Sbjct: 48 IYSMPSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEA-LEKKIC 106
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLG-HGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ A G H VLT +VY +G G+LG +P +V L+ V I CG
Sbjct: 107 IKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGY 166
Query: 413 NFTAAIC----LHKW 423
+ + A+ L+ W
Sbjct: 167 SHSMALLKSEQLYSW 181
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 386 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA-- 438
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 439 -YNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 487
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 488 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 535
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 536 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 595
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 596 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 654
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 655 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 695
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 461 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 513
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 514 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 568
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 569 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 625
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 626 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 685
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 686 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 733
Query: 310 LTVA 313
+ A
Sbjct: 734 QSFA 737
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 165/345 (47%), Gaps = 28/345 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG G G++ ++ L P+ L+ V+ IACG H L+
Sbjct: 27 NMYCWG-STVYGELGLG--------GIEDENILMPRELDFQKATAVEQIACGETHTVLIT 77
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K GEVFS G G+LGH + L ++I L + ACG H+ AV G L+ W
Sbjct: 78 KDGEVFSCGNNDSGQLGHEKPTKRL--QMIPGLDAFIFKQAACGASHSVAVNNWGQLFCW 135
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G LG G ++ R+ L V I+CG HT +T+ G+L+ +G +
Sbjct: 136 GSNAD--GQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSD 193
Query: 213 GVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G D K + P+ + L + ACG +H+ V SG +F W
Sbjct: 194 GQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVV------------SKSGAVFGW 241
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG D K VP + L VACG +V LT G V+T G+ +YGQL
Sbjct: 242 GRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQL 301
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTW 375
G+ ++ R +L S V +I+CG H +A++ S+ +VY W
Sbjct: 302 GHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 158/334 (47%), Gaps = 23/334 (6%)
Query: 90 LVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
L+ ++ WG G LG G D ++L P+ +D +E +ACGE HT +T G
Sbjct: 21 LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
++++ G+ + G LGH + + G L+ +CG H+ V + GQLF +
Sbjct: 81 EVFSCGNN--DSGQLGHEKPTKRL--QMIPG-LDAFIFKQAACGASHSVAVNNWGQLFCW 135
Query: 208 GDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
G G LG G +++ PR V++L V+ ACG HT A+ ++G
Sbjct: 136 GSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALT------------NNG 183
Query: 267 KLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+L+ WG G+LG G D + + P + L +ACG ++ ++ SG V+ G
Sbjct: 184 ELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGR 243
Query: 326 PVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+GQLG N +D +P ++ L + V+ +ACG LT V+T G G G+LG
Sbjct: 244 NTFGQLGMNDISDKYVPCLLK-TLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLG 302
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
HG + P + L V I+CG T A+
Sbjct: 303 HGANSNEILPRQIIELMGSVVTQISCGKRHTLAL 336
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 135/277 (48%), Gaps = 21/277 (7%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
++Y WG Y LG + + +P+ ++ + V I+CG HT ++T G++F+
Sbjct: 27 NMYCWGSTVYGELGLGGIEDENILMPRELDFQ-KATAVEQIACGETHTVLITKDGEVFSC 85
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+ G LGH K + + L +AACG H+ AV + G+
Sbjct: 86 GNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAV------------NNWGQ 131
Query: 268 LFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
LF WG G+LG G P V AL ++ACG T+ALT +G +Y GS
Sbjct: 132 LFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSN 191
Query: 327 VYGQLGNPQADGKL---PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
GQLG Q D K+ P + G L+ + IACG YH V++ V+ WG+ G+L
Sbjct: 192 SDGQLGLGQ-DVKIETRPKLITG-LATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQL 249
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G D D+ P L++ L++ +VK +ACG F+ + +
Sbjct: 250 GMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTM 286
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 39/299 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG + DG LG G + VK+++ PK + + + IACGG H+ +V+
Sbjct: 183 GELYAWGSNS-DGQLGLGQD-------VKIETR-PKLITGLATIPIAFIACGGYHSIVVS 233
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G VF WG + G+LG SD P L+ L N ++ VACGE + +T+ G ++T
Sbjct: 234 KSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTC 293
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G Y G LGHG + +P+++ L G V+ ISCG HT A+V S G+++ +G G
Sbjct: 294 GAGMY--GQLGHGANSNEILPRQI-IELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGG 350
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT---AAVVEVMVGNSSSSNCSSGKL 268
G LG +SV+ P+ V G W + + +EV +S+S +C +
Sbjct: 351 SGQLGSQTARSVATPQMV------------LGPWSSKNRSLAMEVDSASSTSEDCVVKHI 398
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
F+ GD + + +EP+ CR+ + +++ + PV
Sbjct: 399 FSGGDHCFATVTQKEDN-----------IEPDDCRIYLPDTQILSINEEQLIACQKVPV 446
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/341 (31%), Positives = 168/341 (49%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P L+++ + +AC E ++ SG +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYT---Q 476
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEG--IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
Y+ L P+ V G + + +++ S G H + + G+++++G G G
Sbjct: 477 AYSSDALA---------PQLVQGLVSRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526
Query: 214 VLGHGDRKSVSIPREVESL----KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G R V ACG ++AA+ + G+L+
Sbjct: 527 RLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAIT------------AEGELY 574
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 575 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 634
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P VE KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 635 YGKLGRGGSDGCKTPKLVE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHG 693
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 694 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 152/329 (46%), Gaps = 39/329 (11%)
Query: 2 KAMAMDAFRVSLSSAVSSSS--QGSGHDDGD------ALGDVFIWGEGTGDGVLGGGLNR 53
+A + DA L + S + + + H DG A G+V+ WG G G R
Sbjct: 476 QAYSSDALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG--------GR 527
Query: 54 VGSCFGVKMDSSLPKALES----AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG 109
+G V ++ PK + + V +IACG ++A + +GE+++WG + GRLG
Sbjct: 528 LGHGDTVPLEE--PKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLG 585
Query: 110 HGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
HG D P L+ L + + VAC G+ T AVT +G +++WGDG Y G LG G
Sbjct: 586 HGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGS 643
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
PK V L+ + V + CG + +T GQ++++G G LGHG + V P+
Sbjct: 644 DGCKTPKLVE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
+E L+G + + A G H A+ E ++ +WG D+ + K
Sbjct: 703 LLEGLQGKKVIDVAAGSTHCLALTE------------DSEVHSWGSNDQCQHFDTLHATK 750
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTT 316
P + L + +ACG + + A ++
Sbjct: 751 PEPAALPGLDTKHIVGIACGPAQSFAWSS 779
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQA-- 467
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 468 -YNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 516
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 517 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 564
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 565 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 624
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 683
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 684 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 490 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 542
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 543 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 597
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 598 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 654
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 655 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 714
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 715 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 762
Query: 310 LTVA 313
+ A
Sbjct: 763 QSFA 766
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 466
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 467 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 516
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 517 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 564
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 565 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 624
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 683
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 684 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 490 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 542
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 543 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 597
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 598 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 654
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 655 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 714
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 715 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 762
Query: 310 LTVA 313
+ A
Sbjct: 763 QSFA 766
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 168/342 (49%), Gaps = 35/342 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H ALV + G++F +G + G+LG G + V P + AL + ++L ACG HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHG---NEVSHWVPKRVN--GPLEGIHVSSISCGPWHT 195
T G+LY G N G LG G + S + + N GP + ++ G +
Sbjct: 101 LVFTSRGNLYACGGN--NEGQLGLGDCNDRTSFHLVEFFNKQGP-----IKMLAAGSNTS 153
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A +T G+L+ GD + G +G G + P+EV G R +CG +H+A V
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT---- 207
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVA 313
G L+T+G+ D G+LG ++ VP V + + +VACG TVA
Sbjct: 208 --------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVA 258
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
L T VY+ G +GQLG+ + +LP VE K V+ ACG H A++T
Sbjct: 259 L-TENEVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGL 316
Query: 372 VYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+YT+G G +G+LG G+ + N P+L D V S+ CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 27/292 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT +G L+ +G + N+G LG G + + P V L V +CG
Sbjct: 41 ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LRSERVKLTACGR 97
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V TS G L+ G G LG GD RT ++ ++
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEFFNKQGPIK 144
Query: 253 VMVG--NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
++ N+S++ G+L+ GD +G++G G + L P V+ V V+CG+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYH 202
Query: 311 TVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +T G +YT G G+LG A+ K+P +V + V ++ACG H LT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR--VVQVACGGGHTVALT 260
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ EVY++G G G+LGHG + P +VE + +VK ACG N TA I
Sbjct: 261 -ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 151/318 (47%), Gaps = 31/318 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K + P +++ V+ ACG H + +G +++ G + G+LG G +D
Sbjct: 70 LGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRT 129
Query: 118 HPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
L++ + I+++A G + A+T G LY GD + G +G G E + P+ V
Sbjct: 130 SFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSE--GQIGLGKESNALTPQEV 187
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS--IPREVESLKG 234
+ G V +SCG +H+A VT G L+TFG+ G LG K + +P++V +
Sbjct: 188 S---VGKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
R V+ ACG HT A+ E +++++G G G+LGHG E++L P
Sbjct: 245 -RVVQVACGGGHTVALTE-------------NEVYSFGLGQFGQLGHGTFIFESRL-PRV 289
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
V + ACG + T +T +G +YT G +G+LG + N+ + L F
Sbjct: 290 VEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG--LGEENFTNQFKPTLCPRF 347
Query: 353 ----VEEIACGSYHVAVL 366
V + CG H+ VL
Sbjct: 348 LDYHVHSVTCGGCHMLVL 365
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ +G +FTFG F + + P + LK +R +CG HTA V E
Sbjct: 9 IPESGAVFTFGKSKF---------ADNAPSKF-WLKNDVPLRISCGDEHTALVTE----- 53
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+GKLF +G + G+LG G K PTCV AL ACG + T+ T+
Sbjct: 54 -------NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSR 106
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-----VEEIACGSYHVAVLTSKTEV 372
G++Y G GQLG G +R L + F ++ +A GS A LT +
Sbjct: 107 GNLYACGGNNEGQLGL----GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRL 162
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
Y G + G++G G + +P V K+V ++CG +A + +
Sbjct: 163 YMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV 208
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 23 GSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA 82
G GH +V+ +G G G LG G +S LP+ +E V++ A
Sbjct: 252 GGGHTVALTENEVYSFGLGQF-GQLGHGT--------FIFESRLPRVVEHFRKGRVKHAA 302
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVACGEYHT 140
CG H AL+ G ++++G+ G+LG G + ++ P L + ++ V CG H
Sbjct: 303 CGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHM 362
Query: 141 CAV 143
+
Sbjct: 363 LVL 365
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV WG +G ++V+ P + L+N+ + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---Q 475
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
YN L P+ V G L ++ I+ H + + G+++++G G G
Sbjct: 476 AYNSDTLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 214 VLGHGDRKSVSIPREVESLKGLR----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
LGHGD + P+ + + G + V ACG ++AA+ + G+L+
Sbjct: 526 RLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 573
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPV 327
TWG G+ GRLGHG E + +P VA L VACG + T+A+T +G V++ G
Sbjct: 574 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 633
Query: 328 YGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YG+LG +DG K P +E KL V ++ CGS LT +VY+WGKG N RLGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 692
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+ P L+E L+ K+V +A G+ A+ +H W
Sbjct: 693 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 140/304 (46%), Gaps = 41/304 (13%)
Query: 24 SGHDDGD------ALGDVFIWGEGTGDGVLGGGLN------RVGSCFGVKMDSSLPKALE 71
+ H DG A G+V+ WG G G G LG G +V S F K
Sbjct: 499 AAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKVISAFSGKQAGK------ 551
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
V +IACG ++A + +GE+++WG + GRLGHG D P L+ L + +
Sbjct: 552 -----HVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI 606
Query: 132 LVAC--GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VAC G+ T AVT +G +++WGDG Y G LG G PK + L+ + V +
Sbjct: 607 DVACGSGDAQTLAVTENGQVWSWGDGDY--GKLGRGGSDGCKTPKLIEK-LQDLDVVKVR 663
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG + +T GQ++++G G LGHG + V P+ +E L+G + + A G H A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E ++ +WG D+ + + K P + L + +ACG +
Sbjct: 724 LTE------------DSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPA 771
Query: 310 LTVA 313
+ A
Sbjct: 772 QSFA 775
>gi|94983836|gb|ABF50623.1| G93-GW [Glycine max]
Length = 466
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/106 (62%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNN 441
+LG GDT+DR +P VEAL+D+QV +I CG +FTAAI LHK +S DQS C+GCRLPF
Sbjct: 2 QLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTCTGCRLPF-G 60
Query: 442 FKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNK 487
F RK+HNCYNCGL+FC +CSSKK A +AP+ +K +RVCD CF+K
Sbjct: 61 FTRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDK 106
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 175/349 (50%), Gaps = 30/349 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V+ ACG RH+ L+ G V S G+ + G+LG P LI AL + + LV+CG
Sbjct: 22 EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
+ H+ AV G ++ WG G+ G LG + + PK++ L GI + +SCG +H+
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSE--GQLGIEECKEKIFTPKKIK-TLTGIKIIQVSCGHYHS 138
Query: 196 AVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
++ GQ++++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 139 LALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL---- 194
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
SG F WG + G+L G+ + P + AL + ++CG+ T
Sbjct: 195 --------SLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHT 246
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSK 369
LT +G V+T G GQLG NP A + P +VEG V +I CGSYH +A + +
Sbjct: 247 AVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYTT 304
Query: 370 TEVYTWGKGAN----GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGT 412
EV ++G+G N ++ + L+ A L D QVK I GT
Sbjct: 305 GEVVSFGRGRNCASSPTHSEAQMENFDMSCLISANDLVDVQVKHIFAGT 353
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 21/266 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG + C K
Sbjct: 69 ALETLLVGLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLG-----IEEC---KEKI 114
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK +++ + + ++CG H+ +++ G+V+SWG+ S G+LG G + P+ +
Sbjct: 115 FTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVR 174
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++LSG + WG + T L G+ V + P + G L+
Sbjct: 175 SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSI-GALKS 233
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD + G LG+ P++VE + GL + + C
Sbjct: 234 LDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVS-QIDC 292
Query: 243 GVWHTAAVVEV---MVGNSSSSNCSS 265
G +HT A V +V NC+S
Sbjct: 293 GSYHTLAYVYTTGEVVSFGRGRNCAS 318
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 29/267 (10%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDA 124
L KALE+ L V ++CG H+ V +G VF+WG S G+LG + PK I
Sbjct: 66 LIKALET---LLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKT 122
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGI 183
L+ + I V+CG YH+ A++ G +Y+WG + G LG G E S P+RV LEGI
Sbjct: 123 LTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQ--GQLGLGKEFPSQASPQRVRS-LEGI 179
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL---GHGDRKSVSIPREVESLKGLRTVRA 240
++ ++ G H+ ++ +G F +G G L G+ P + +LK L +
Sbjct: 180 PLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYI 239
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CG HTA + + +GK+FT+GD G+LG+ K P V ++
Sbjct: 240 SCGYEHTAVLTQ------------NGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG-IDGL 286
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPV 327
++ CG T+A +VYT G V
Sbjct: 287 VSQIDCGSYHTLA-----YVYTTGEVV 308
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G V +CG H+ ++ S G + + GD T G LG + P +++L+ L +
Sbjct: 20 GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVS 79
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG + KE P + L
Sbjct: 80 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIK 127
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ G VY+ G GQLG + P++ + +S + ++
Sbjct: 128 IIQVSCGHYHSLALSEDGQVYSWGKNSQGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 184
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG G+L G+ R P + ALK V I+CG
Sbjct: 185 AAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYE 244
Query: 414 FTAAI 418
TA +
Sbjct: 245 HTAVL 249
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
V + ACG H +L S V++ G G+LG P L++AL+ V ++CG
Sbjct: 23 VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGK 82
Query: 413 NFTAAICLHK 422
+ A+C HK
Sbjct: 83 EHSLAVC-HK 91
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 188/408 (46%), Gaps = 41/408 (10%)
Query: 57 CFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ---------GEVFSWGEESGGR 107
C+G L A +L +N++ G+ ++ Q G V + G+ S GR
Sbjct: 133 CWGSNSSQQLTDATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVLSNGTVMANGKGSYGR 192
Query: 108 LGHGVDSDVLHPKLIDALSNMNIELVACG-EYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
LG+G + P LI+ + + L + G + H+ A+ +G ++TWGDG Y G LGHG+
Sbjct: 193 LGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDY--GKLGHGD 250
Query: 167 EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
+ PK + + V + CG H+A V AG L+ +G+G +G LG GD S+P
Sbjct: 251 STTQKSPKLIEALASRVIVDA-DCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVP 309
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
+V ++ + CG HT + + ++++G + G+LGHGD
Sbjct: 310 VQVPDIR--EASQVVCGFNHTVVL-----------STDGRTVWSFGAAENGKLGHGDTNR 356
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ-LGNPQADGK--LPNR 343
+ P + AL ++A G ++ A+T G +Y G +G LGN +D LP
Sbjct: 357 QFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWG---FGPCLGNGSSDETFMLPKV 413
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKD 402
V G LS V +IA G HV LT V+TWG NG+ G G SP +V+ L
Sbjct: 414 VRG-LSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHG 472
Query: 403 KQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFK-RKRHNC 449
++ + GT T +C + + S + P K +KRH C
Sbjct: 473 AGIQQVTAGTTHT-FVCFWR-----NTSREKNLKHPLRTLKSKKRHIC 514
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 162/328 (49%), Gaps = 27/328 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
EVF WG S +L D +L+P+ + + + G+Y T AV +G + G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK--VMSMTAGQYCTFAVLSNGTVMANGK 187
Query: 155 GTYNFGLLGHGNEVSHWVPKRVN--GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+Y G LG+G S P + P+ I S S G H+ + GQ++T+GDG +
Sbjct: 188 GSY--GRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDY 243
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ +E+L V A CG H+AAV C +G L+ WG
Sbjct: 244 GKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAV------------CDAGHLYMWG 291
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQL 331
+GD GRLG GD + VP V + E + +V CG + TV L+T G V++ G+ G+L
Sbjct: 292 EGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAENGKL 349
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G+ + + ++ L + +IA G+ A +T + +Y WG G LG+G +D+
Sbjct: 350 GHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNGSSDET 407
Query: 392 -NSPSLVEALKDKQVKSIACGTNFTAAI 418
P +V L + V IA G N A+
Sbjct: 408 FMLPKVVRGLSGRVVIDIAVGENHVVAL 435
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
++F WG +L E KL+ P ++ V + G T A+ ++G V G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLS--VYGKVMSMTAGQYCTFAVLSNGTVMANGK 187
Query: 326 PVYGQLGN-PQADGKLPNRVE--GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
YG+LGN A P +E + K + + G H + +++TWG G G+
Sbjct: 188 GSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDYGK 245
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
LGHGD+ + SP L+EAL + + CG +AA+C L+ W G
Sbjct: 246 LGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEG 293
>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 400
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 198/419 (47%), Gaps = 63/419 (15%)
Query: 30 DALGDVFIWGEGTG-DGVLGGGLNRVGSCFGVKMDSSLPKALES---AVVLDVQNIACGG 85
D G+V IW G G DG LG R+ D LP+ L+ + + +ACGG
Sbjct: 7 DKGGEVEIWSWGAGTDGQLG--TTRL-------EDEHLPQLLDLPRFSSAGPISLLACGG 57
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
H + G+V +WG + G+LGHG L PK + L + + V+ G H+ V+
Sbjct: 58 AHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSD 117
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
+G L+T GDG+ FG LGHG+ SH P +V+ + HV I+CG H+ V+ Q++
Sbjct: 118 TGCLFTCGDGS--FGQLGHGDCKSHCSPVKVS-YFDSKHVDQIACGMRHSLVLLKGDQVY 174
Query: 206 TFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
FG G G LG + +S+S+P+ L+G+ + H+AA+
Sbjct: 175 GFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAAL------------S 222
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
++G L+TWG G G P C+ + + F +VA G + + LT G V+ +
Sbjct: 223 ANGHLYTWGR------GFGSTSDVHCPRCLPSSL--CFTQVALGWNHMLVLTGGGEVFML 274
Query: 324 GSPVYGQLGNPQADGKLPN--------------------RVEGKLSKSFVEEIACGSYHV 363
G +G LG+PQ ++ + +V+G L V +IA G+ H
Sbjct: 275 GGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEKVQG-LDGLNVVQIAAGAEHS 333
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK----DKQVKSIACGTNFTAAI 418
A++T + TWG G +G+LG G+T D+ SP V + + CG+ FT AI
Sbjct: 334 ALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 392
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 169/342 (49%), Gaps = 35/342 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H ALV + G++F +G + G+LG G + V P + AL + ++L ACG HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHG---NEVSHWVPKRVN--GPLEGIHVSSISCGPWHT 195
T G+LY G N G LG G + S + + N GP + ++ G +
Sbjct: 101 LVFTSRGNLYACGGN--NEGQLGLGDCNDRTSFHLVEFFNKQGP-----IKMLAAGSNTS 153
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A +T G+L+ +GD + G +G G + P+EV G R +CG +H+A V
Sbjct: 154 AALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT---- 207
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVA 313
G L+T+G+ D G+LG ++ VP V + + +VACG TVA
Sbjct: 208 --------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVA 258
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
L T VY+ G +GQLG+ + +LP VE K V+ ACG H A++T
Sbjct: 259 L-TENEVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGL 316
Query: 372 VYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+YT+G G +G+LG G+ + N P+L D V S+ CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT +G L+ +G + N+G LG G + + P V L+ V +CG
Sbjct: 41 ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LKSERVKLTACGR 97
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V TS G L+ G G LG GD RT ++ ++
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEFFNKQGPIK 144
Query: 253 VMVG--NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
++ N+S++ G+L+ WGD +G++G G + L P V+ V V+CG+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYH 202
Query: 311 TVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +T G +YT G G+LG A+ K+P +V + V ++ACG H LT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR--VVQVACGGGHTVALT 260
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ EVY++G G G+LGHG + P +VE + +VK ACG N TA I
Sbjct: 261 -ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALIT 312
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 152/318 (47%), Gaps = 31/318 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K + P +++ V+ ACG H + +G +++ G + G+LG G +D
Sbjct: 70 LGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRT 129
Query: 118 HPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
L++ + I+++A G + A+T G LY WGD + G +G G E + P+ V
Sbjct: 130 SFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSE--GQIGLGKESNALTPQEV 187
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS--IPREVESLKG 234
+ G V +SCG +H+A VT G L+TFG+ G LG K + +P++V +
Sbjct: 188 SV---GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
R V+ ACG HT A+ E +++++G G G+LGHG E++L P
Sbjct: 245 -RVVQVACGGGHTVALTE-------------NEVYSFGLGQFGQLGHGTFIFESRL-PRV 289
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
V + ACG + T +T +G +YT G +G+LG + N+ + L F
Sbjct: 290 VEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG--LGEENFTNQFKPTLCPRF 347
Query: 353 ----VEEIACGSYHVAVL 366
V + CG H+ VL
Sbjct: 348 LDYHVHSVTCGGCHMLVL 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 18/190 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +++WG+ + +G +G G + ++ P+ E +V V ++CG H+A V
Sbjct: 160 GRLYMWGDNS-EGQIG---------LGKESNALTPQ--EVSVGKRVFWVSCGYYHSAFVT 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G ++++GE+ G+LG + H P+ + + + ++ VACG HT A+T ++Y
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQ-VACGGGHTVALT-ENEVY 265
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
++G G FG LGHG + RV V +CG HTA++T G L+TFGDG
Sbjct: 266 SFGLG--QFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDG 323
Query: 211 TFGVLGHGDR 220
G LG G+
Sbjct: 324 RHGKLGLGEE 333
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ +G +FTFG F + + P + LK +R +CG HTA V E
Sbjct: 9 IPESGAVFTFGKSKF---------ADNAPSKF-WLKNDVPLRISCGDEHTALVTE----- 53
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+GKLF +G + G+LG G K PTCV AL ACG + T+ T+
Sbjct: 54 -------NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSR 106
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-----VEEIACGSYHVAVLTSKTEV 372
G++Y G GQLG G +R L + F ++ +A GS A LT +
Sbjct: 107 GNLYACGGNNEGQLGL----GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRL 162
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
Y WG + G++G G + +P V K+V ++CG +A + +
Sbjct: 163 YMWGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV 208
>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
Length = 1053
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 192/405 (47%), Gaps = 29/405 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+++ WG + + GG+ + S +P +SAV +ACG RH +
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQ----ILTPSQIPWKPDSAV----NQVACGHRHTLFLTA 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V++ G +LGH + + P I L + I +ACG H+ A+T G + +WG
Sbjct: 54 SGKVYACGSNDYSQLGHELPTK--RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWG 111
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
D G LGH ++ ++ L V I+CG H+ +T G+L+++G +G
Sbjct: 112 DN--ECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYG 169
Query: 214 VLGHGDRKSVS---IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LG +S P + +L G+ ACG GN + S +F
Sbjct: 170 QLGVKSPSELSQCNYPMRLTTLLGIPAAAIACG------------GNHTFLISKSSAVFG 217
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YGQ
Sbjct: 218 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 277
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + ++ R+ +L S + ++ACG+ H +A++ S+ +Y +G G++G+LG +T
Sbjct: 278 LGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTK 337
Query: 390 DRNSPSLVEA-LKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
N P +V ++ ++ ++ +H+ SG DQS+ +
Sbjct: 338 SLNLPQVVIGPWVSPSGSALLQSSDEKISVVIHQIFSGGDQSIVT 382
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 198/407 (48%), Gaps = 49/407 (12%)
Query: 23 GSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK---ALESAVVLDVQ 79
GS +D + + WG + ++ G +++ + PK A ++A+ L+
Sbjct: 327 GSPNDSSSLKHEAYAWGSNSSHQLVEGNKDKILT----------PKKNDAFKNAIQLE-- 374
Query: 80 NIACGGRHAAL-VNKQGEVFSWGEESGGRLGHGVDS--DVLHPKLIDALSNMNIELVACG 136
G++ + G + + G+ S G+LG G S LH KL L N NI+ ++
Sbjct: 375 ----AGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSKQCLH-KL--NLFNQNIDQISSS 427
Query: 137 ---EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+ HT A+T +G +Y+WGDG FG LGHGN + +PK + G + ++ IS G
Sbjct: 428 KGSDSHTLALTKNGVVYSWGDG--EFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSR 485
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+A +T G L+T+G+G G LGHGD +P V S+ V A C HT + +
Sbjct: 486 HSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCS--HTVVLSK- 542
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
++T+G GD G+LGHG+ + + P V AL ++A G ++A
Sbjct: 543 ----------DEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIA 592
Query: 314 LTTSGHVYTMGS-PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LT +G +Y G P G +G A LP VE L + +I+ G H L++ EV
Sbjct: 593 LTWTGFIYVWGCGPCLG-VGAADAVHLLPKIVES-LRDVHIVDISLGDCHCLALSADHEV 650
Query: 373 YTWGKGANGR--LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
Y+WG G+ LGH T + P+ V AL +++ I+ GT+ + A
Sbjct: 651 YSWGNNNMGQCGLGHCFT-PVSLPTKVLALDGIKIEQISTGTSHSFA 696
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 25/280 (8%)
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+L + Y WG + + L GN+ PK+ + I + + G + T + G
Sbjct: 334 SLKHEAYAWGSNSSH--QLVEGNKDKILTPKKNDAFKNAIQLEA---GQYCTFALFDDGS 388
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESL-KGLRTVRAACGV-WHTAAVVEVMVGNSSSS 261
L G G+ G LG GD S ++ + + + ++ G HT A+ +
Sbjct: 389 LHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTK--------- 439
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSGHV 320
+G +++WGDG+ G+LGHG+ + +P + + + ++ G + A+T G +
Sbjct: 440 ---NGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDL 496
Query: 321 YTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS-KTEVYTWGKG 378
YT G +G+LG+ + ++P V + S ++A G H VL+ + V+T+G G
Sbjct: 497 YTWGEGEHGRLGHGDSSIQRVPTLVRSIDAAS---QVAAGCSHTVVLSKDEMTVWTFGAG 553
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
NG+LGHG+T P +V+ALK ++K IA GT + A+
Sbjct: 554 DNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIAL 593
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 55/200 (27%)
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT----------------CVAALVE 298
+G+ + S+ + + WG +L G+K+ L P C AL +
Sbjct: 326 LGSPNDSSSLKHEAYAWGSNSSHQLVEGNKDKILTPKKNDAFKNAIQLEAGQYCTFALFD 385
Query: 299 PNFCRVACG------------------HSL-------------------TVALTTSGHVY 321
ACG H L T+ALT +G VY
Sbjct: 386 DGSLH-ACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVY 444
Query: 322 TMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G +G+LG+ A KLP + G + I+ GS H A +T ++YTWG+G +
Sbjct: 445 SWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEH 504
Query: 381 GRLGHGDTDDRNSPSLVEAL 400
GRLGHGD+ + P+LV ++
Sbjct: 505 GRLGHGDSSIQRVPTLVRSI 524
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 159/295 (53%), Gaps = 30/295 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG D + GGL G K+ +P E+ L+V +A G + V +
Sbjct: 428 VFVWGLNDKDQL--GGLK------GSKI--KVPSFSETLSALNVVQVAGGSKSLFAVTVE 477
Query: 95 GEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGDLYT 151
G+V++ GE + GRLG G+ S V P+ I ALS+ ++ VA G H A+T+ G +++
Sbjct: 478 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 537
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG+G + G LGH + ++ P+ + L+ + I+CG H+A +TS+G+L+T+G G
Sbjct: 538 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 594
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGV--WHTAAVVEVMVGNSSSSNCSSGKLF 269
+G LGHGD + P+ V+ L G R ++ ACG T A+ + G +F
Sbjct: 595 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD------------EGLVF 642
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+WGDGD G+LG G E +P + L C++ CG ++ALT SG V+T G
Sbjct: 643 SWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 697
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 157/307 (51%), Gaps = 24/307 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ A G AA + + VF WG +LG S + P + LS +N+ VA G
Sbjct: 411 IRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGS 468
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISC--GPWH 194
AVT+ G +Y G+ T G LG G + + +P+++ L V ++ G H
Sbjct: 469 KSLFAVTVEGKVYACGEATN--GRLGLGISSGTVPIPRQITA-LSSYVVKKVAVHSGGRH 525
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+T G++F++G+G G LGH R + PR +E+LK R ACG H+AA+
Sbjct: 526 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT--- 582
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SSG+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+
Sbjct: 583 ---------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL 633
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALT G V++ G +G+LG ++G +P +E +L+ V +I CG+ LT
Sbjct: 634 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGV 692
Query: 372 VYTWGKG 378
V+TWGKG
Sbjct: 693 VWTWGKG 699
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 128/249 (51%), Gaps = 27/249 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ GE T +G LG G++ G AL S VV V + GGRHA +
Sbjct: 478 GKVYACGEAT-NGRLGLGISS-----GTVPIPRQITALSSYVVKKVA-VHSGGRHATALT 530
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VFSWGE G+LGH + P+LI+AL I +ACG H+ A+T SG+LYTW
Sbjct: 531 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 590
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDG 210
G G Y G LGHG+ + PK V L G V ++CG T +T G +F++GDG
Sbjct: 591 GLGEY--GRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 647
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + +IP+ +E L G + CG + A+ + SG ++T
Sbjct: 648 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 695
Query: 271 WGDGDKGRL 279
WG KGRL
Sbjct: 696 WG---KGRL 701
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 20/282 (7%)
Query: 142 AVTLSGDLYTWG--DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A T+ ++ WG D GL G +V + + L ++V ++ G VT
Sbjct: 421 AATIRTKVFVWGLNDKDQLGGLKGSKIKVPSF-----SETLSALNVVQVAGGSKSLFAVT 475
Query: 200 SAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G+++ G+ T G LG G +V IPR++ +L + A H+ G
Sbjct: 476 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAV---HSG-------GRH 525
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+++ GK+F+WG+GD G+LGH + P + AL +ACG S + ALT+SG
Sbjct: 526 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 585
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY--HVAVLTSKTEVYTWG 376
+YT G YG+LG+ +L ++ L V ++ACGS LT + V++WG
Sbjct: 586 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 645
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G ++ N P +E L + V I CG F+ A+
Sbjct: 646 DGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 687
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F +G LG + +P E+L L V+ A G + ++ V V
Sbjct: 427 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG---SKSLFAVTV------- 476
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVAC--GHSLTVALTTSGH 319
GK++ G+ GRLG G + +P + AL +VA G ALT G
Sbjct: 477 --EGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGK 534
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V++ G G+LG+ + + P +E L + +IACGS H A LTS E+YTWG G
Sbjct: 535 VFSWGEGDDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLG 593
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGHGD + P +V+ L +V +ACG+ + L
Sbjct: 594 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 635
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 171/363 (47%), Gaps = 28/363 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA GG H G V+ WG G+LG G +D
Sbjct: 350 GSYTDRSTPGAV-SGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRST 408
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + + +A G YHTCA+T S ++ WGD Y G LG G + P V+G
Sbjct: 409 PGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFY--GQLGDGTTTNRSTPGAVSG 465
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
G V++I+ G +HT +TS+G ++ +G G LG G + S P V L T
Sbjct: 466 LPSG--VTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSGVTA 523
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
AA G +HT A++ SSG ++ WG ++G+LG G P V L
Sbjct: 524 IAA-GDYHTCALM------------SSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGL-P 569
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVEE 355
+A G+ T ALT S V+ G+ GQLG DG NR V S V
Sbjct: 570 SGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLG----DGTTTNRSTPVAVSGLPSGVTA 625
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
IA G+YH LTS V+ WG +G+LG G T +R++P V L V +IA G T
Sbjct: 626 IAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGDEHT 684
Query: 416 AAI 418
A+
Sbjct: 685 CAL 687
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 167/363 (46%), Gaps = 28/363 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA GG H + G V WG G+LG G +D
Sbjct: 95 GSYTDRSTPVAV-SGLPSGVTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRST 153
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P + L + + +A G HTCA+ SG ++ WG YN G LG G+ + H P V+
Sbjct: 154 PVAVSGLPS-GVTAIAAGGAHTCALMSSGGVWCWG---YNLSGQLGDGSTIYHITPVAVS 209
Query: 178 G-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
G P E V++I+ G HT +T +G ++ +GD FG LG G S P V L
Sbjct: 210 GLPSE---VTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGV 266
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
T AA G +T A+ SSG ++ WG D G+LG G + P V L
Sbjct: 267 TAIAAGGR-YTCALT------------SSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGL 313
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEE 355
+A G + T ALT+SG V+ G GQLG+ D P V G S V
Sbjct: 314 -PSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGL--PSGVTA 370
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
IA G H TS V+ WG G+LG G T DR++P V L V +IA G T
Sbjct: 371 IAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLP-SGVTAIAAGNYHT 429
Query: 416 AAI 418
A+
Sbjct: 430 CAL 432
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 172/375 (45%), Gaps = 38/375 (10%)
Query: 57 CFGVKMDSSL----------PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGG 106
C+G + L P A+ S + +V IA G H + G V+ WG+ G
Sbjct: 185 CWGYNLSGQLGDGSTIYHITPVAV-SGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFG 243
Query: 107 RLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
+LG G +D P + L + + +A G +TCA+T SG ++ WG + G LG G+
Sbjct: 244 QLGDGSFTDSSTPAAVGGLPS-GVTAIAAGGRYTCALTSSGGVWCWGR--NDSGQLGDGS 300
Query: 167 EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
+ P V G G V++I+ G HT +TS+G ++ +G G LG G S P
Sbjct: 301 FTNRSTPGAVGGLPSG--VTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTP 358
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
V L T AA G HT A SSG ++ WG G+LG G
Sbjct: 359 GAVSGLPSGVTAIAAGGA-HTCA------------RTSSGGVWCWGGNFYGQLGDGTTTD 405
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR-VE 345
+ P V+ L +A G+ T ALT S V+ G YGQLG DG NR
Sbjct: 406 RSTPGAVSGL-PSGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLG----DGTTTNRSTP 460
Query: 346 GKLS--KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
G +S S V IA G+YH LTS V+ WG+ +G+LG G T +R++P V L
Sbjct: 461 GAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-S 519
Query: 404 QVKSIACGTNFTAAI 418
V +IA G T A+
Sbjct: 520 GVTAIAAGDYHTCAL 534
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 166/364 (45%), Gaps = 30/364 (8%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA G H + V+ WG+ G+LG G ++
Sbjct: 401 GTTTDRSTPGAV-SGLPSGVTAIAAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRST 459
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + + +A G YHTCA+T SG ++ WG + G LG G + P V G
Sbjct: 460 PGAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWGR--NDSGQLGDGTTTNRSTPGAVGG 516
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL-KGLRT 237
G V++I+ G +HT + S+G ++ +G G LG G S P V L G+
Sbjct: 517 LPSG--VTAIAAGDYHTCALMSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPSGVMA 574
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ A G +HT A+ S ++ WG G+LG G + P V+ L
Sbjct: 575 IAA--GNYHTCALT------------GSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGL- 619
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR-VEGKLS--KSFVE 354
+A G+ T ALT+SG V+ G + GQLG DG NR G +S S V
Sbjct: 620 PSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLG----DGTTTNRSTPGAVSGLPSGVT 675
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
IA G H LT V+ WG G+LG G T +R++P V L V +IA G
Sbjct: 676 AIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLP-SGVTAIAAGVYH 734
Query: 415 TAAI 418
T A+
Sbjct: 735 TCAL 738
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 153/339 (45%), Gaps = 27/339 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G + S P A+ S + V IA G H + G V+ WG G+LG G ++
Sbjct: 452 GTTTNRSTPGAV-SGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRST 510
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + + +A G+YHTCA+ SG ++ WG N G LG G+ P V G
Sbjct: 511 PGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWG--LNNRGQLGDGSYTDSSTPVAVGG 567
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
G V +I+ G +HT +T + ++ +G + G LG G + S P V L T
Sbjct: 568 LPSG--VMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTA 625
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
AA G +HT A+ SSG ++ WG G+LG G + P V+ L
Sbjct: 626 IAA-GNYHTCALT------------SSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSGL-P 671
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR-VEGKLS--KSFVEE 355
+A G T ALT SG V+ G YGQLG DG NR G +S S V
Sbjct: 672 SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLG----DGTTTNRSTPGAVSGLPSGVTA 727
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
IA G YH LT V WG +G+LG G R +P
Sbjct: 728 IAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 766
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 115/248 (46%), Gaps = 22/248 (8%)
Query: 45 GVLGGGLNRVGSCF-GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
GV GLN G G DSS P A+ + V IA G H + V+ WG
Sbjct: 539 GVWCWGLNNRGQLGDGSYTDSSTPVAV-GGLPSGVMAIAAGNYHTCALTGSDGVWCWGTN 597
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLL 162
S G+LG G ++ P + L + + +A G YHTCA+T SG ++ WG YN G L
Sbjct: 598 SDGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGNYHTCALTSSGGVWCWG---YNLSGQL 653
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
G G + P V+G G V++I+ G HT +T +G ++ +GD +G LG G +
Sbjct: 654 GDGTTTNRSTPGAVSGLPSG--VTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTN 711
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
S P V L T AA GV+HT A+ SG + WG+ G+LG G
Sbjct: 712 RSTPGAVSGLPSGVTAIAA-GVYHTCALT------------GSGGVMCWGNNGDGQLGDG 758
Query: 283 DKEAKLVP 290
+ P
Sbjct: 759 RPLYRTTP 766
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 111/241 (46%), Gaps = 20/241 (8%)
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
PL+G V++I+ G WHT +T +G+++ +G G LG G S P V L T
Sbjct: 58 PLQG--VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTA 115
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
AA G HT A+ SSG + WG G+LG G + P V+ L
Sbjct: 116 IAAGGA-HTCALT------------SSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGL-P 161
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIA 357
+A G + T AL +SG V+ G + GQLG+ + P V G S+ V IA
Sbjct: 162 SGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSE--VTAIA 219
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H LT V+ WG G+LG G D ++P+ V L V +IA G +T A
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLP-SGVTAIAAGGRYTCA 278
Query: 418 I 418
+
Sbjct: 279 L 279
>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 179/366 (48%), Gaps = 42/366 (11%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDALSNMNIELVAC 135
++++I+CGG H + + G V++ G G+LG ++ + P + L +++ A
Sbjct: 66 NLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQISA- 124
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWH 194
G +H+CA+T+ G+LYTWG + G LG G + + VP L GI++ ++ H
Sbjct: 125 GYHHSCAITVDGELYTWGKNSN--GQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182
Query: 195 TAVVTSAGQLFTFGDGTF---------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+ VT GQ ++G G +LG S PR ++ L+G++ A G+
Sbjct: 183 SIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLL 242
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
H+A + E +G ++ +G+ +L GD P+ + L P VA
Sbjct: 243 HSACIDE------------NGSVYIFGEKAVDKLAFGDANNATTPSMIGKL--PYSQEVA 288
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVA 364
CG T +T+ G +YT GS G LGN D +P RVEG +S VE+++CG H A
Sbjct: 289 CGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTA 348
Query: 365 VLTSKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ S+ V+TWG G + G+LGHGD D +P+LV K + ++CG
Sbjct: 349 AI-SEGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGF 407
Query: 413 NFTAAI 418
N T AI
Sbjct: 408 NHTGAI 413
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 15/325 (4%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS--NMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
WG GRLG+G + PKL+++ S N N++ ++CG HT +T +G +Y G
Sbjct: 35 WGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYA--TGLN 92
Query: 158 NFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+FG LG N ++ + P V+G + + IS G H+ +T G+L+T+G + G LG
Sbjct: 93 DFGQLGVSNNTTYCMEPLEVSGLKK--EIVQISAGYHHSCAITVDGELYTWGKNSNGQLG 150
Query: 217 HGDRKS--VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G + V +P +VE L G+ A H+ AV + G + S G
Sbjct: 151 LGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTD---GGQALSWGGGGSGRLGHGH 207
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
LG ++ P + L +A G + + +G VY G +L
Sbjct: 208 QSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFG 267
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
A+ + GKL S +E+ACG YH V+TS E+YTWG NG LG+G D + P
Sbjct: 268 DANNATTPSMIGKLPYS--QEVACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIP 325
Query: 395 SLVEA-LKDKQVKSIACGTNFTAAI 418
VE V+ ++CG TAAI
Sbjct: 326 ERVEGPFLRSPVEKVSCGWKHTAAI 350
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 133/310 (42%), Gaps = 54/310 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS--SLPKALESAVVLDVQNIACGGRHAAL 90
G+++ WG+ + +G LG G K ++ +P +E ++++ +A H+
Sbjct: 136 GELYTWGKNS-NGQLG---------LGKKAENVVPVPTKVECLSGINIKMVALASEHSIA 185
Query: 91 VNKQGEV---------FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
V G+ LG S P+ I L + ++ +A G H+
Sbjct: 186 VTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSA 245
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ +G +Y +G+ + G N + P + G L + ++CG +HT V+TS
Sbjct: 246 CIDENGSVYIFGEKAVDKLAFGDANNAT--TPSMI-GKLP--YSQEVACGGYHTCVITSG 300
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT--VRAACGVWHTAAVVEVMVGNSS 259
G+L+T+G G LG+G + IP VE LR+ + +CG HTAA+ E
Sbjct: 301 GELYTWGSNENGCLGNGSIDVLHIPERVEG-PFLRSPVEKVSCGWKHTAAISE------- 352
Query: 260 SSNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
G +FTWG G G+LGHGD + PT VA + V+CG
Sbjct: 353 ------GNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCG 406
Query: 308 HSLTVALTTS 317
+ T A+ S
Sbjct: 407 FNHTGAILES 416
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D G V+I+GE D + G N + M LP + Q +ACGG H
Sbjct: 248 DENGSVYIFGEKAVDKLAFGDANNATT---PSMIGKLPYS---------QEVACGGYHTC 295
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDA-LSNMNIELVACGEYHTCAVTLSG 147
++ GE+++WG G LG+G DVLH P+ ++ +E V+CG HT A++ G
Sbjct: 296 VITSGGELYTWGSNENGCLGNG-SIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAIS-EG 353
Query: 148 DLYTWG----------DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+++TWG DG + G LGHG++ + P V + + +SCG HT
Sbjct: 354 NVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFE-KKMKALEVSCGFNHTGA 412
Query: 198 V 198
+
Sbjct: 413 I 413
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 24/129 (18%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD-VQNIACGGRHAALV 91
G+++ WG +G LG G V +P+ +E + V+ ++CG +H A +
Sbjct: 301 GELYTWGSNE-NGCLGNGSIDV---------LHIPERVEGPFLRSPVEKVSCGWKHTAAI 350
Query: 92 NKQGEVFSWGE------------ESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+ +G VF+WG SGG+LGHG D D ++P L+ M V+CG H
Sbjct: 351 S-EGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNH 409
Query: 140 TCAVTLSGD 148
T A+ S D
Sbjct: 410 TGAILESVD 418
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 189/399 (47%), Gaps = 40/399 (10%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A+ ++ WG L + GS G +S+ P+ +++ DV + A G ++A
Sbjct: 35 AVSSLYTWGRSD--------LGQTGS--GRDQNSTAPEPVQALQGKDVVHAAGGSYNSAF 84
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
V + GE+++ G +LG L P + AL N+ VACG+ H AV +G L
Sbjct: 85 VTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLA 144
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG Y G LG G + RV + G H + ++ G H+ +TS+GQ+++FG+G
Sbjct: 145 AWGSNEY--GQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEG 202
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+FG LGHGD + + P V++L V A G + +AAV SG++FT
Sbjct: 203 SFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAV------------SLSGRVFT 250
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG+G+ +P V + + +VACG +ALT G VYT G GQ
Sbjct: 251 WGRNKYGQLGNGEFGNAFLPQPVPGIEQA--VQVACGDHHCIALTRWGEVYTWGLHSSGQ 308
Query: 331 LGNPQADGKL--------PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN-- 380
LG G P+RV+ L+ + +++ G+ H ++ ++ WG GAN
Sbjct: 309 LGQGSNLGSEALNGCLCSPSRVD-SLADQSIRQVSAGARHSFFVSPGEQL--WGAGANDE 365
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVK-SIACGTNFTAAI 418
G+L P+ V L ++ ++A G + A +
Sbjct: 366 GQLALQSVPSVALPTRVPGLPGLPMRFAVAAGDHSIAVL 404
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 15/219 (6%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+T+G G G G ++ + P V++L+G V AA G +++A V
Sbjct: 39 LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTR----------- 87
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G+L+T G D +LG +E L P V+AL N VACG +A+ +GH+
Sbjct: 88 -DGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAW 146
Query: 324 GSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
GS YGQLG + A P RV ++ + +A G+ H LTS +VY++G+G+ G
Sbjct: 147 GSNEYGQLGTGEVGASAAQP-RVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFG 205
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
LGHGD ++R P+LV+AL + + SIA G F+AA+ L
Sbjct: 206 ALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSL 244
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 28/280 (10%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
LYTWG + G G G + + P+ V L+G V + G +++A VT G+L+T G
Sbjct: 39 LYTWGRS--DLGQTGSGRDQNSTAPEPVQA-LQGKDVVHAAGGSYNSAFVTRDGELYTTG 95
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
LG R+ P V +L+ ACG H AVV+ +G L
Sbjct: 96 SNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVD------------NGHL 143
Query: 269 FTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WG + G+LG G+ A P + + +F RVA G + ++ALT+SG VY+ G
Sbjct: 144 AAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEE----IACGSYHVAVLTSKTEVYTWGKGANGRL 383
+G LG+ G + NR + L ++ E IA G Y A ++ V+TWG+ G+L
Sbjct: 204 FGALGH----GDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQL 259
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
G+G+ + P V + +Q +ACG + I L +W
Sbjct: 260 GNGEFGNAFLPQPVPGI--EQAVQVACGDHHC--IALTRW 295
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 124/263 (47%), Gaps = 16/263 (6%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
V ++ P+ L+ +A G H+ + G+V+S+GE S G LGHG ++ P
Sbjct: 159 VGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKP 218
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
L+ AL I +A GEY + AV+LSG ++TWG Y G LG+G + ++P+ V G
Sbjct: 219 TLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKY--GQLGNGEFGNAFLPQPVPGI 276
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
+ + V +CG H +T G+++T+G + G LG G E+L G
Sbjct: 277 EQAVQV---ACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLG------SEALNGCLCSP 327
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAAL- 296
+ ++ +V G S S G+ WG G D+G+L + +PT V L
Sbjct: 328 SRVDSLADQSIRQVSAGARHSFFVSPGEQL-WGAGANDEGQLALQSVPSVALPTRVPGLP 386
Query: 297 -VEPNFCRVACGHSLTVALTTSG 318
+ F A HS+ V +SG
Sbjct: 387 GLPMRFAVAAGDHSIAVLDESSG 409
>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
Length = 1062
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 180/374 (48%), Gaps = 35/374 (9%)
Query: 34 DVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG GG+ + S +P ++AV Q +ACG RH +
Sbjct: 6 ELYCWG-STSHGQLGLGGIEDEQ----ILTPSQIPWTPDTAV----QQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPK-----LIDALSNMNIELVACGEYHTCAVTLSG 147
G+V++ G +LGH + + P+ LI L + I + CG H+ A++ G
Sbjct: 57 ATGKVYACGSNDYSQLGHDLPTK--RPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWG 114
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+ +WGD + G LGH + +V L V I+CG H+ +TS G+L+++
Sbjct: 115 QVLSWGDN--DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSW 172
Query: 208 GDGTFGVLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
G +G LG D + P + +L G+ ACG GN S
Sbjct: 173 GSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACG------------GNHSFLISK 220
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SG +F WG + G+LG D+ + PT + L VACG +V LT G V+T G
Sbjct: 221 SGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCG 280
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRL 383
+ YGQLG+ + ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+L
Sbjct: 281 AGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL 340
Query: 384 GHGDTDDRNSPSLV 397
G T P +V
Sbjct: 341 GTRSTKSLMLPQVV 354
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 24/332 (7%)
Query: 96 EVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
E++ WG S G+LG G D +L P I + ++ VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 154 DGTYNFGLLGHG--NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
Y+ LGH + P + L+ + I CG H+ ++ GQ+ ++GD
Sbjct: 66 SNDYS--QLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDND 123
Query: 212 FGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGH D++ V +P+ V L V+ ACG H+ A+ S G+L++
Sbjct: 124 CGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------SCGELYS 171
Query: 271 WGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WG G+LG D P + L+ +ACG + + ++ SG V+ G
Sbjct: 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 231
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG N + + P +++ L V +ACG LT++ V+T G GA G+LGHG
Sbjct: 232 CGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 290
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ + P +V L + +ACG T A+
Sbjct: 291 FSSNEMLPRMVMELMGSTITQVACGNRHTLAL 322
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 88/175 (50%), Gaps = 11/175 (6%)
Query: 264 SSGK-LFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK L+ WG G+LG G + E L P+ + + +VACGH T+ LT +G V
Sbjct: 2 ASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKV 61
Query: 321 YTMGSPVYGQLGN--PQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
Y GS Y QLG+ P ++ P + +L + +I CGS H L+ +V +WG
Sbjct: 62 YACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGD 121
Query: 378 GANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
G+LGH D + P +V L K V IACG N + A+ L+ W S +
Sbjct: 122 NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNI 176
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 185/389 (47%), Gaps = 60/389 (15%)
Query: 70 LESAVVLDVQNI-ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH------PKLI 122
L ++L QN+ ACG HAA+V G+V++WG GRLG G D++ P +
Sbjct: 765 LPVGLLLPTQNVLACGQDHAAIV-ANGDVYTWGRAHEGRLGQG---DIMSLDGRAPPLRV 820
Query: 123 DAL--SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+ L +++ VACG+ HT AVT G LY+WG +Y G LG G+ H P V L
Sbjct: 821 ETLHMHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSY--GQLGVGDRNVHSRPVAVEA-L 877
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
G S++CG HT V+T +L++FG G G LGHGD + +P+ V L V
Sbjct: 878 SGQRCLSVACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGI 937
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+ G H+ A+ + G+++ +G G+LG G VP + AL +
Sbjct: 938 SAGYAHSGALT------------NDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHH 985
Query: 301 FCRVACGHSLTVALTTSGH-VYTMG-SPVY--------------GQLGNPQADGK----- 339
+ CG+ +A+T++ VYT G SP+ + NP +
Sbjct: 986 VSILTCGYYSNIAITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRL 1045
Query: 340 ----------LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LP+ V + ++ ++++ H +LT+ ++Y+WG G+LG G+
Sbjct: 1046 PSLPLENQHLLPSLVPTNI-QAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRV 1104
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++ P L+ +D Q ++A G+ F+ A+
Sbjct: 1105 SQSVPVLINRSRDDQFVAVAAGSRFSLAV 1133
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 163/375 (43%), Gaps = 53/375 (14%)
Query: 23 GSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV--LDVQN 80
G H A GDV+ WG +G LG G + S G + P +E+ + + V+
Sbjct: 780 GQDHAAIVANGDVYTWGRA-HEGRLGQG--DIMSLDG----RAPPLRVETLHMHGIHVRA 832
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+ACG H V ++G+++SWG S G+LG G + P ++ALS VACG+ HT
Sbjct: 833 VACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHT 892
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+T L+++G G + G LGHG+ +PK VN L + IS G H+ +T+
Sbjct: 893 LVLTQDQRLWSFGWGVH--GQLGHGDVEDQILPKLVN-QLSKCAIVGISAGYAHSGALTN 949
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
GQ++ FG +FG LG G ++P +++L CG + A+ +
Sbjct: 950 DGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNIAI---------T 1000
Query: 261 SNCSSGKLFTWGDG---------------DKGRLGHGD--------------KEAKLVPT 291
SN K++TWG R + D + L+P+
Sbjct: 1001 SN--PQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQHLLPS 1058
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSK 350
V ++ ++ + + LTT G +Y+ GS GQLG + +P +
Sbjct: 1059 LVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLINRSRDD 1118
Query: 351 SFVEEIACGSYHVAV 365
FV A + +AV
Sbjct: 1119 QFVAVAAGSRFSLAV 1133
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 176/394 (44%), Gaps = 35/394 (8%)
Query: 44 DGVLGGGLNRVGSCFGVKMD----SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
DG LG G R + + +D S+ PK L + ++ ++CG RH + G V+S
Sbjct: 20 DGQLGTGAKRRPT---LAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYS 76
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSN--MNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
WG S G+LGHG + P+ I + ++ V+CG H+ AVT G LY WG+ +
Sbjct: 77 WGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHW 136
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGI---HVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
L E +H LEG+ V +SCG HTA +T+ G+++ +G G G
Sbjct: 137 GQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQ 196
Query: 215 LGHGDR----------KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
LG G VS P VE G + V+ ACG +H+AAV E
Sbjct: 197 LGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTE------------ 244
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G ++ WG D G LG G + P V + RV+CG T+ + SG Y G
Sbjct: 245 QGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFG 304
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YG+LG + + L V + ACG H +TS Y G+ +GRLG
Sbjct: 305 RGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLG 364
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
D + P+ ++ L V+ ++ G + A+
Sbjct: 365 MTDMKPLSVPTRLD-LGPIPVRQVSAGGAHSMAL 397
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 140/297 (47%), Gaps = 34/297 (11%)
Query: 33 GDVFIWGEGTGDGVLG--GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
G +++WGE T G LG F VK LE V ++CGG H A
Sbjct: 126 GTLYMWGE-THWGQLGLPKEFEAAHESFPVKC-----PLLEGVADESVVKVSCGGTHTAA 179
Query: 91 VNKQGEVFSWGEESGGRLGHGV----DSD------VLHPKLIDALSNMNIELVACGEYHT 140
+ G V+ WG G+LG G D+D V P L++ + + VACG +H+
Sbjct: 180 LTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHS 239
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AVT G +Y WG ++G+LG G PKRV + I +SCG WHT VV
Sbjct: 240 AAVTEQGHVYIWGK--EDYGMLGVGQTSDQQTPKRVEF-FDDIPALRVSCGGWHTMVVAK 296
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G + FG G +G LG GD KS + P V++LKG ++AACG HT V
Sbjct: 297 SGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVT--------- 347
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
S G + G D GRLG D + VPT + P +V+ G + ++ALT S
Sbjct: 348 ---SDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIP-VRQVSAGGAHSMALTHS 400
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS------SLPKALESAVVLDVQNIACGG 85
LG V++WG G G LG +GS + D S P +E V +ACG
Sbjct: 183 LGRVYVWGRGD-SGQLG-----IGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGA 236
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
H+A V +QG V+ WG+E G LG G SD PK ++ ++ V+CG +HT V
Sbjct: 237 FHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCGGWHTMVVAK 296
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SGD Y +G G Y G LG G+ S P V L+G V +CG HT VTS G +
Sbjct: 297 SGDCYAFGRGEY--GRLGLGDTKSRTRPHLVKA-LKGQTVIQAACGGSHTLFVTSDGIAY 353
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVE 230
G G LG D K +S+P ++
Sbjct: 354 VAGRPDHGRLGMTDMKPLSVPTRLD 378
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 168/342 (49%), Gaps = 35/342 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H ALV + G++F +G + G+LG G + V P + AL + ++L ACG HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHG---NEVSHWVPKRVN--GPLEGIHVSSISCGPWHT 195
T G+LY G N G LG G + S + + N GP + ++ G +
Sbjct: 101 LVFTSRGNLYACGGN--NEGQLGLGDCNDRTSFHLVEFFNKQGP-----IKMLAAGSNTS 153
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A +T G+L+ GD + G +G G + P+EV G R +CG +H+A V
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVT---- 207
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVA 313
G L+T+G+ D G+LG ++ VP V + + +VACG TVA
Sbjct: 208 --------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVA 258
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
L T VY+ G +GQLG+ + +LP VE K V+ ACG H A++T
Sbjct: 259 L-TENEVYSFGLGQFGQLGHGTFIFESRLPRVVE-HFRKGRVKHAACGENHTALITDNGL 316
Query: 372 VYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+YT+G G +G+LG G+ + N P+L D V S+ CG
Sbjct: 317 LYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 140/293 (47%), Gaps = 27/293 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT +G L+ +G + N+G LG G + + P V L V +CG
Sbjct: 41 ISCGDEHTALVTENGKLFMFG--SNNWGQLGLGTKTTVNKPTCVKA-LRSERVKLTACGR 97
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V TS G L+ G G LG GD RT ++ ++
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCND-------------RTSFHLVEFFNKQGPIK 144
Query: 253 VMVG--NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
++ N+S++ G+L+ GD +G++G G + L P V+ V V+CG+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS--VGKRVFWVSCGYYH 202
Query: 311 TVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +T G +YT G G+LG A+ K+P +V + V ++ACG H LT
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDR--VVQVACGGGHTVALT 260
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ EVY++G G G+LGHG + P +VE + +VK ACG N TA I
Sbjct: 261 -ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALIT 312
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 151/318 (47%), Gaps = 31/318 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K + P +++ V+ ACG H + +G +++ G + G+LG G +D
Sbjct: 70 LGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRT 129
Query: 118 HPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
L++ + I+++A G + A+T G LY GD + G +G G E + P+ V
Sbjct: 130 SFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSE--GQIGLGKESNALTPQEV 187
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS--IPREVESLKG 234
+ G V +SCG +H+A VT G L+TFG+ G LG K + +P++V +
Sbjct: 188 SV---GKRVFWVSCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
R V+ ACG HT A+ E +++++G G G+LGHG E++L P
Sbjct: 245 -RVVQVACGGGHTVALTE-------------NEVYSFGLGQFGQLGHGTFIFESRL-PRV 289
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
V + ACG + T +T +G +YT G +G+LG + N+ + L F
Sbjct: 290 VEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLG--LGEENFTNQFKPTLCPRF 347
Query: 353 ----VEEIACGSYHVAVL 366
V + CG H+ VL
Sbjct: 348 LDYHVHSVTCGGCHMLVL 365
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 33/228 (14%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ +G +FTFG F + + P + LK +R +CG HTA V E
Sbjct: 9 IPESGAVFTFGKSKF---------ADNAPSKF-WLKNDVPLRISCGDEHTALVTE----- 53
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+GKLF +G + G+LG G K PTCV AL ACG + T+ T+
Sbjct: 54 -------NGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTLVFTSR 106
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-----VEEIACGSYHVAVLTSKTEV 372
G++Y G GQLG G +R L + F ++ +A GS A LT +
Sbjct: 107 GNLYACGGNNEGQLGL----GDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRL 162
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
Y G + G++G G + +P V K+V ++CG +A + +
Sbjct: 163 YMRGDNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFVTV 208
>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
Length = 1058
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 193/406 (47%), Gaps = 31/406 (7%)
Query: 34 DVFIWGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
+++ WG T G LG GG+ + S +P +SA+ + +ACG RH +
Sbjct: 6 ELYCWG-NTSHGQLGLGGIEDEQ----ILTPSQVPWTPDSAI----KQVACGHRHTLFLT 56
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V++ G +LGH + + P LI L + + +ACG H+ A++ G + +W
Sbjct: 57 SSGRVYACGSNDHSQLGHDLPTK--RPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSW 114
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LG + ++ L V I+CG H+ +TS G+L+++G +
Sbjct: 115 GDN--DCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIY 172
Query: 213 GVLGHGDRKSVS---IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG K V+ P + +L G+ ACG GN S S +F
Sbjct: 173 GQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACG------------GNHSFIISKSSAVF 220
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ ++ PT + L VACG +V LT G V+T G+ YG
Sbjct: 221 GWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 280
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ ++ R+ +L S + ++ACG+ H +A++ S+ VY +G G++G+LG T
Sbjct: 281 QLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTRST 340
Query: 389 DDRNSPSLVEA-LKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
P +V ++ ++ ++ +H+ SG DQS +
Sbjct: 341 KSLTLPQVVIGPWVSPSGSALLQSSDAKVSVVIHQIFSGGDQSFVT 386
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 22/228 (9%)
Query: 198 VTSAGQLFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T+ +L+ +G+ + G LG G + + + P +V + ACG HT +
Sbjct: 1 MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLT---- 56
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SSG+++ G D +LGH + P + L++ ++ACG ++AL+
Sbjct: 57 --------SSGRVYACGSNDHSQLGHDLPTKR--PLLIPELLDYVVVQIACGSRHSMALS 106
Query: 316 TSGHVYTMGSPVYGQLGNP--QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G V + G GQLG Q +LP V +SK+ V+ IACG+ H LTS E+Y
Sbjct: 107 EWGQVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQ-IACGNNHSLALTSCGELY 165
Query: 374 TWGKGANGRLGHG---DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+WG G+LG + N P + L V +IACG N + I
Sbjct: 166 SWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFII 213
>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
Length = 1175
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 165/374 (44%), Gaps = 65/374 (17%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+PKAL+ + + I CG H + GEV+S G +LGHG L + AL
Sbjct: 32 IPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHGQSGGQLAK--VVAL 89
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG-HGNEVSHWVPKRVNGPLEGIH 184
+ I VACG YH A+T +G L+TWG + G LG G++ ++ L
Sbjct: 90 EHYRIISVACGAYHNAAITYNGLLFTWGCNSN--GQLGREGDDTG----VKLVRALSDHK 143
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRAAC 242
V +S G HT V+T ++F FG G LG G +SVSIP+++ L GL R
Sbjct: 144 VVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVA 203
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-------GDKEAKL------- 288
G WH+ + SG L+ WG + G+LG D + +L
Sbjct: 204 GGWHSFVLT------------VSGSLYAWGSNNYGQLGLSYFGSSPNDHQNELTLKCGSV 251
Query: 289 --------------------------VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+PT V L +ACG + TVALT G V+T
Sbjct: 252 GSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFT 311
Query: 323 MGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EVYTWGKGAN 380
G+ YGQLG N G R + + V +IACG +H L KT ++ +G+G N
Sbjct: 312 FGAGRYGQLGHNESTIGISVPRKITEFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTN 371
Query: 381 GRLGHGDTDDRNSP 394
+LG GDT +R P
Sbjct: 372 AQLGMGDTKNRLLP 385
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 264 SSGKLFTWGDGDKGRL--GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
++ +LF WG ++G+L D L+P + P ++ CG++ TV LT G VY
Sbjct: 5 ATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVY 64
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
+ G + QLG+ Q+ G+L V L + +ACG+YH A +T ++TWG +NG
Sbjct: 65 SCGCNEFQQLGHGQSGGQLAKVV--ALEHYRIISVACGAYHNAAITYNGLLFTWGCNSNG 122
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+LG D LV AL D +V ++ G T +
Sbjct: 123 QLGR--EGDDTGVKLVRALSDHKVVQVSLGVEHTLVL 157
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLID 123
S+P +++ +V +ACG H + + G VF++G G+LGH + + P+ I
Sbjct: 277 SIPTFVKTLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKIT 336
Query: 124 ALSNMNIELVACGEYHTCA-VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
+ +ACG +HT A V +G L+ +G GT LG G+ + +P V G
Sbjct: 337 EFMGNVVTQIACGRFHTLALVPKTGRLFAFGQGTN--AQLGMGDTKNRLLPCPVKG 390
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/324 (32%), Positives = 163/324 (50%), Gaps = 20/324 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACGG+H + + G V++ G S G+LGH D P+L+ AL I +V+CG
Sbjct: 35 LKEVACGGQHTLFLLQDGSVYTCGSNSCGQLGH--DKAGNSPELVGALDTQKITMVSCGR 92
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLG-HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV G ++ WG G + G LG E + +P R+ L +S + CG H
Sbjct: 93 AHSVAVNEQGQVFVWGAG--DGGQLGLETAETAVRIP-RLLKKLCDHSISQVVCGNQHCI 149
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQLFT+G + G LG G ++ + P V+SL G+ + G H A+
Sbjct: 150 ALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFAL----- 204
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG DK+ + VP + L ++CG T ALT
Sbjct: 205 -------SLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALT 257
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
SG ++T G GQLG+ ++ +L R +L + V +I CG +H +A + S VY
Sbjct: 258 KSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYA 317
Query: 375 WGKGANGRLGHGDTDDRNSPSLVE 398
+G ++G+LG G D SP V+
Sbjct: 318 FGCNSHGQLGTGILADLRSPHPVK 341
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 157/329 (47%), Gaps = 28/329 (8%)
Query: 97 VFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+ WG G+LG GV+ + V P++ S ++ VACG HT + G +YT G
Sbjct: 1 MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60
Query: 156 TYNFGLLGH---GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+ G LGH GN P+ V G L+ ++ +SCG H+ V GQ+F +G G
Sbjct: 61 S--CGQLGHDKAGNS-----PELV-GALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDG 112
Query: 213 GVLG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG +V IPR ++ L + CG H A+ G+LFTW
Sbjct: 113 GQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIAL------------SRDGQLFTW 160
Query: 272 GDGDKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G E +KL P+ V +L ++ G AL+ SG V+ G GQ
Sbjct: 161 GQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQ 220
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG N + D +P ++ S+ V I+CG H A LT ++T+G G+ G+LGHG ++
Sbjct: 221 LGLNDKQDRAVPCHIKFLRSQRVVY-ISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSN 279
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P V L +V I CG + T A
Sbjct: 280 NELLPRRVMELMGTEVSQITCGRHHTLAF 308
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 24/251 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF+WG G G + GL + + P+ L+ + + CG +H ++
Sbjct: 102 GQVFVWGAGDGGQL---GLETAETAVRI------PRLLKKLCDHSISQVVCGNQHCIALS 152
Query: 93 KQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G++F+WG+ S G+LG G ++ L P + +L+ + + + G H A++LSG ++
Sbjct: 153 RDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFG 212
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG G LG ++ VP + L V ISCG HTA +T +G LFTFGDG+
Sbjct: 213 WGKN--KAGQLGLNDKQDRAVPCHIKF-LRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHG + +PR V L G + CG HT A V SSG ++ +
Sbjct: 270 RGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVP-----------SSGTVYAF 318
Query: 272 GDGDKGRLGHG 282
G G+LG G
Sbjct: 319 GCNSHGQLGTG 329
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG+ + G LG G P ++S + + I GG H ++
Sbjct: 155 GQLFTWGQNSS-GQLGLGKGETSKLS--------PSPVKSLAGIPLAQITAGGDHCFALS 205
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ G+LG D P I L + + ++CG+ HT A+T SG L+T+
Sbjct: 206 LSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTF 265
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
GDG+ G LGHG+ + +P+RV L G VS I+CG HT A V S+G ++ FG +
Sbjct: 266 GDGSR--GQLGHGSSNNELLPRRVM-ELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNS 322
Query: 212 FGVLGHGDRKSVSIPREVES 231
G LG G + P V++
Sbjct: 323 HGQLGTGILADLRSPHPVKN 342
>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
Length = 489
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 179/398 (44%), Gaps = 61/398 (15%)
Query: 46 VLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG 105
+L G +G F +K S + +QN C + L+ SWG
Sbjct: 63 ILAGSATLIGGMFLLKNQS---------MSFKLQNAECDAKQQKLL------LSWGNGQN 107
Query: 106 GRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 164
G+LG+G ++ L P + LS+ +I V + AVT G +YTWG G L
Sbjct: 108 GQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGK--TRGGSLSQ 165
Query: 165 GNEVSH----WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
+S +P + P + ++CG H A VT G+L T+G+ G LGH +
Sbjct: 166 QKSLSRATNLLLPTLIVAP--EVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQ 223
Query: 221 -------KSVSIPREVE----------SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
KS S PR +L+ + ++A+CG HTA + +
Sbjct: 224 LQQESKNKSYS-PRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQ----------- 271
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G+++TWG G G LGHG+ + +P V L N ++ CG T AL G++Y+
Sbjct: 272 -DGEVYTWGFGKNGALGHGNWDQVDLPKKVEGL--SNIVKIDCGMDYTFALDKDGNIYSW 328
Query: 324 GSPVYGQLGNPQAD---GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
GS YGQLG Q++ +P +++ S V +I+CG H A L K E + WG G +
Sbjct: 329 GSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGND 388
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LGH + + N P +E + ++ + CG T I
Sbjct: 389 GQLGHKEKTNLNQPKKLEFTEP--LRRVVCGGGHTGVI 424
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 190/420 (45%), Gaps = 74/420 (17%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEV 97
WG G +G LG G + S+P ++ D+ + G +A V QG++
Sbjct: 102 WGNGQ-NGQLGNG--------NETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQI 152
Query: 98 FSWGEESGGRLGHGVD----SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
++WG+ GG L +++L P LI A ++ VACG+ H VT G L TWG
Sbjct: 153 YTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQ-VACGKTHLAGVTKDGKLITWG 211
Query: 154 DGTYNFGLLGHGNEVSH------WVPKR---------VNGPLEGIHVSSISCGPWHTAVV 198
+ + G LGH ++ + P+ V G LE + SCG HTA +
Sbjct: 212 NP--DQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACL 269
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T G+++T+G G G LGHG+ V +P++VE L + V+ CG+ +T A+ +
Sbjct: 270 TQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLSNI--VKIDCGMDYTFALDK------ 321
Query: 259 SSSNCSSGKLFTWGDGDKGRLG--HGDKEAKLVPTCVAALVEP----NFCRVACGHSLTV 312
G +++WG G+LG + VP L P + ++CG +
Sbjct: 322 ------DGNIYSWGSNRYGQLGTTQSNINKHNVPI---QLQLPHGSSHVVDISCGEEHSA 372
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVE---EIACGSYHVAVLTS 368
L G + G GQLG+ + + P ++E F E + CG H V+T+
Sbjct: 373 FLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLE------FTEPLRRVVCGGGHTGVITT 426
Query: 369 KTEVYTWGKGANGRLGHGDTDD-----RNSPSLV----EALKDKQVKSIACGTNFTAAIC 419
+++ +G+G +G+LG GD ++ R P V + LK +V IA G+N AI
Sbjct: 427 AGKLFLFGRGRDGQLGRGDVNESMAAFRIEPKEVVNISQTLK-AEVLEIALGSNHCLAIA 485
>gi|357486571|ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355514908|gb|AES96531.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 615
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 185/379 (48%), Gaps = 48/379 (12%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVN-------KQGEVFSWGEESGGRLGHG-VDSDV 116
+L A VV D+ + CG + A L + G+V SWG + G+LGHG V +++
Sbjct: 257 ALTSAQMEKVVRDIDLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNL 316
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
L+PK I +L N I V+ G H+ V+ SG L+T GDG+ FG LGHG+ SH P +V
Sbjct: 317 LYPKAITSLDNYFITHVSAGWGHSGFVSDSGCLFTCGDGS--FGQLGHGDYASHSSPIKV 374
Query: 177 NGPLEGIHVSSISCGPWHTAVVTS---AGQLFTFGDGTFGVLG--HGDRKSVSIPREVES 231
+ ++ +V+ ++CG H+ V+ + Q++ FG G G LG KS+++P+ +
Sbjct: 375 SSFVDQ-NVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVISG 433
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ V + H+AA+ G L+TWG G KG E +P
Sbjct: 434 FEDEEIVGISANGDHSAAL------------SVDGHLYTWGRGFKGY------EDSHLPQ 475
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP---VYGQLGNPQADGKLPNRVEGKL 348
C+ + F +V G + +A+T G VY +G V L N + L + E L
Sbjct: 476 CLNS--TSKFTKVTLGWNHALAMTGEGKVYMLGGNHLGVLSDLHNARPAKSLFDSREANL 533
Query: 349 SK------SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA--- 399
K + + +IA G+ H ++T E+ TWG G +G+LG GD DR SP V
Sbjct: 534 EKAPGLDGTKITDIATGAEHSVLVTENGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYD 593
Query: 400 LKDKQVKSIACGTNFTAAI 418
L + + CG+ FT A+
Sbjct: 594 LNEAASIRVYCGSGFTFAL 612
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 119/268 (44%), Gaps = 40/268 (14%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNK---QGEVFSWGEESGGRLGHGVDS--DVLHP 119
S P + S V +V +ACG RH+ ++ K +V+ +G G+LG D + P
Sbjct: 369 SSPIKVSSFVDQNVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLP 428
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
K+I + I ++ H+ A+++ G LYTWG G G E SH +P+ +N
Sbjct: 429 KVISGFEDEEIVGISANGDHSAALSVDGHLYTWGRGF-------KGYEDSH-LPQCLNST 480
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDR--KSVSIPREVE----- 230
+ + ++ G H +T G+++ G GVL H R KS+ RE
Sbjct: 481 SK---FTKVTLGWNHALAMTGEGKVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAP 537
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
L G + A G H+ V E +G++ TWG G+ G+LG GD ++ P
Sbjct: 538 GLDGTKITDIATGAEHSVLVTE------------NGEIKTWGWGEHGQLGLGDDGDRISP 585
Query: 291 TCVAA---LVEPNFCRVACGHSLTVALT 315
V L E RV CG T ALT
Sbjct: 586 VTVNLGYDLNEAASIRVYCGSGFTFALT 613
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS--------- 317
+L++WG G G+LG G + + +P ++ + +ACG + +ALT++
Sbjct: 212 RLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPSV-SSLACGGAHVIALTSAQMEKVVRDI 270
Query: 318 -----------------------GHVYTMGSPVYGQLGNPQADGKL--PNRVEGKLSKSF 352
G V + G GQLG+ + L P + L F
Sbjct: 271 DLLECGFKPAILCFTFSVREFRHGKVLSWGRGNSGQLGHGEVVNNLLYPKAIT-SLDNYF 329
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ ++ G H ++ ++T G G+ G+LGHGD +SP V + D+ V +ACG
Sbjct: 330 ITHVSAGWGHSGFVSDSGCLFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQNVAQVACGM 389
Query: 413 NFTAAI---CLHKWVSG 426
+ + CL V G
Sbjct: 390 RHSLVLLKGCLSNQVYG 406
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 171/380 (45%), Gaps = 61/380 (16%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G +H+ G +++WG GRLG G + L P ++D + + ++ V+ G+ H+
Sbjct: 258 AAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSA 317
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
+ G LYTWG G FG LGHG++ VP++V G G+ V ++CG +HT +T
Sbjct: 318 CIDRQGVLYTWGSG--GFGRLGHGDQGEIPVPRKVEG-FGGVPVLQVACGTFHTLALTHK 374
Query: 202 GQLFTFGDG---TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
G +F +G G G G V++P+ + ++ + + A G +H+AAV VG
Sbjct: 375 GTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVT---VG-- 428
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC---------------- 302
G L WG G RLGHGD++ + P VA L +
Sbjct: 429 -------GDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDY 481
Query: 303 -----------------------RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADG 338
+ CG + TVALT +G V+ GS GQLG Q +
Sbjct: 482 SDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEE 541
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
V+ + + IACGS H + +V+ WG +G+LG G P+ V
Sbjct: 542 DQYEPVKLDCFSTPIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVT 601
Query: 399 ALKDKQVKSIACGTNFTAAI 418
AL +Q + CG +++A I
Sbjct: 602 AL--RQAIDVFCGDDYSACI 619
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 129/515 (25%), Positives = 204/515 (39%), Gaps = 142/515 (27%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ WG G G+G LG G NR S P ++ + DV ++ G H+A ++
Sbjct: 271 GTLWTWGHG-GNGRLGLGHNR---------GSLSPAVVDYILDRDVVFVSAGDSHSACID 320
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA---------------------------- 124
+QG +++WG GRLGHG ++ P+ ++
Sbjct: 321 RQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAW 380
Query: 125 ------------------------LSNMNIEL--VACGEYHTCAVTLSGDLYTWGDGTYN 158
LS++ + + VA G YH+ AVT+ GDL WG G +
Sbjct: 381 GAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSS 440
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVS-------------------------------- 186
LGHG++ + PK V ++V+
Sbjct: 441 --RLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANA 498
Query: 187 ------SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV-- 238
S+ CG HT +T G ++ +G G LG G++ V+ L T
Sbjct: 499 AAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVK-LDCFSTPIR 557
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
R ACG H AV + G +F WG D G+LG G P V AL +
Sbjct: 558 RIACGSKHCLAVAQY------------GDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQ 605
Query: 299 P---------NFCRVACGHSLTVAL-----TTSGHVYTMGSPVYGQLG--NPQADGKL-- 340
+ C + G + TV+L T G ++T G+ G+LG A G +
Sbjct: 606 AIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILT 665
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
P +V + V + G+ H +T++ E Y WG G GRLG G T + +P+ +
Sbjct: 666 PQKVPFSVP---VCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFP 722
Query: 401 KDKQVKSIACGTNFTAAICL--HKWVSGVDQSMCS 433
K +++S+A G + + A+ + W+ G + CS
Sbjct: 723 KGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCS 757
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 153/340 (45%), Gaps = 43/340 (12%)
Query: 78 VQNIACGGRHAALVNKQG---EVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELV 133
V+ +A G H +V +G ++ +WG+ LG GV++ + + P L+ S + V
Sbjct: 48 VKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEV 107
Query: 134 ACGEYHTCAVTLS-----GDLYTWGDGTYNFGLLGHGNEVSH------------------ 170
+CG ++ + G +YT+G G N G LG+ +
Sbjct: 108 SCGTNNSAVLVKRAQQSGGKVYTFGLG--NRGRLGYPKSKAEGGARQQGDDAGDGQEDGP 165
Query: 171 -WV---PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
W P RV + ++ ISCG HT ++ G L+ +G G++G LG GD P
Sbjct: 166 SWFTPKPARVRFR-DKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSP 224
Query: 227 REV----ESLKGLRTVRAACGVWHTAAVVEV--MVGNSSSSNCSS-GKLFTWGDGDKGRL 279
V E G + G T VV G S C+S G L+TWG G GRL
Sbjct: 225 VRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRL 284
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADG 338
G G L P V +++ + V+ G S + + G +YT GS +G+LG+ Q +
Sbjct: 285 GLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEI 344
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+P +VEG V ++ACG++H LT K V+ WG G
Sbjct: 345 PVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAG 383
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 161/373 (43%), Gaps = 61/373 (16%)
Query: 78 VQNIACGGRHAALVNKQ-----GEVFSWGEESGGRLGH---------------------- 110
V ++CG ++A++ K+ G+V+++G + GRLG+
Sbjct: 104 VFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQED 163
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G P + I ++CG HT A++ G LY WG G+Y G LG G+
Sbjct: 164 GPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSY--GNLGQGDTSDA 221
Query: 171 WVPKRVN-GPLEG-----------------IHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+ P RV G +G + V+ + G H+ TS G L+T+G G
Sbjct: 222 YSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGN 281
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G + P V+ + V + G H+A + G L+TWG
Sbjct: 282 GRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDR------------QGVLYTWG 329
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G GRLGHGD+ VP V +VACG T+ALT G V+ G+ + LG
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLG 389
Query: 333 NPQADGKLPNRVEGKLS--KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
+ G V LS + V +A G YH A +T ++ WG G + RLGHGD +
Sbjct: 390 EGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQN 449
Query: 391 RNSPSLVEALKDK 403
+ P V L+++
Sbjct: 450 QPFPKYVADLRNR 462
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 136/354 (38%), Gaps = 72/354 (20%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGD---LYTWGDGTYNFGLLGHGNEVSHWV-PKRVN 177
I L +++ VA G YHT V L GD L WG N +LG G E V P V
Sbjct: 40 IARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNN--VLGLGVETRERVFPGLV- 96
Query: 178 GPLEGIH-VSSISCGPWHTAVVT-----SAGQLFTFGDGTFGVLGHGDRKS--------- 222
P H V +SCG ++AV+ S G+++TFG G G LG+ K+
Sbjct: 97 -PFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGD 155
Query: 223 -------------VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
P V + R +CG HT A+ + G L+
Sbjct: 156 DAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSD------------GGALY 203
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEP---------------------NFCRVACGH 308
WG G G LG GD P V E C H
Sbjct: 204 AWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKH 263
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
S+ A T+ G ++T G G+LG G L V + V ++ G H A +
Sbjct: 264 SM--ACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDR 321
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
+ +YTWG G GRLGHGD + P VE V +ACGT T A+ HK
Sbjct: 322 QGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HK 374
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 156/378 (41%), Gaps = 81/378 (21%)
Query: 20 SSQGSGHDDGDAL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVL 76
S G G + AL G V++WG +G LG G V+ D P L+
Sbjct: 504 QSLGCGENHTVALTGTGAVWVWGS-NDEGQLGLGEQ-------VEEDQYEPVKLD-CFST 554
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ IACG +H V + G+VF+WG G+LG GV P + AL I++
Sbjct: 555 PIRRIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQA-IDVFCGD 613
Query: 137 EYHTC------AVTLS---------GDLYTWGDGTYNFGLLGHGNEV---SHWVPKRVNG 178
+Y C A T+S GDL+TWG G LG G +V S P++V
Sbjct: 614 DYSACITSNGGAQTVSLALESGTEFGDLWTWGAA--ESGKLGLGEDVASGSILTPQKV-- 669
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
P + V + S G H +T+ G+ + +G G +G LG G + P + + KG+R
Sbjct: 670 PFS-VPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIR 728
Query: 239 RAACGVWHTAAVV---EVMVGNSSSSNCS------------------------------- 264
A G H+ A+ ++ + CS
Sbjct: 729 SVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHH 788
Query: 265 ------SGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCR-VACGHSLTVALT 315
+G++F WGD + G G ++A+ + P +A L PN C+ VA G + +
Sbjct: 789 SLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRPEMIAGL--PNVCQWVATGPQASFFVL 846
Query: 316 TSGHVYTMGSPVYGQLGN 333
SG VY G G+LG
Sbjct: 847 CSGEVYAAGVINGGRLGT 864
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 139/355 (39%), Gaps = 79/355 (22%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVAC 135
+Q++ CG H + G V+ WG G+LG G V+ D P +D S I +AC
Sbjct: 503 LQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIAC 561
Query: 136 GEYHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
G H AV GD++ WG DG G+L E P V + I V CG
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFE-----PAAVTALRQAIDV---FCGD 613
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
++A +TS G G +TV A
Sbjct: 614 DYSACITSNG-------------------------------GAQTVSLAL---------- 632
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK---LVPTCVAALVEPNFCRVACGHS 309
S G L+TWG + G+LG G+ A L P V V C + H+
Sbjct: 633 -------ESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVPVCACSLGTSHA 685
Query: 310 LTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSF-VEEIACGSYHVAVLT 367
L A+T G Y G+ YG+LG A+ P + + K + +A G+ H L+
Sbjct: 686 L--AITARGECYAWGAGYYGRLGIGTTANAYAPTKCD--FPKGVRIRSVAAGASHSLALS 741
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD----KQVKSIACGTNFTAAI 418
+++ WGK + T + NSP + L+ +VKSIA + + A+
Sbjct: 742 MDGDLWIWGKKEDT----CSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAV 792
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 122/305 (40%), Gaps = 48/305 (15%)
Query: 5 AMDAFRVSLSSAVSSSSQGS-----GHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFG 59
A+D F SA +S+ G+ + G GD++ WG G LG G +
Sbjct: 606 AIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAES-GKLGLGED------- 657
Query: 60 VKMDSSLPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
V S L V V AC G HA + +GE ++WG GRLG G ++
Sbjct: 658 VASGSILTP---QKVPFSVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAY 714
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG-------TYNFGLLGHGNEVSH 170
P D + I VA G H+ A+++ GDL+ WG YN + E
Sbjct: 715 APTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPS 774
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
VPK V SI+ H+ VT G++F +GD G G R++ + R E
Sbjct: 775 GVPK----------VKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRP-E 823
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG--DKEAKL 288
+ GL V C T V SG+++ G + GRLG G ++ +
Sbjct: 824 MIAGLPNV---CQWVATGPQASFFV-------LCSGEVYAAGVINGGRLGTGWSKRKYQF 873
Query: 289 VPTCV 293
P V
Sbjct: 874 APAAV 878
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 167/327 (51%), Gaps = 23/327 (7%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
LD +IACG +V++ G +F+ G+ G LG G DV P+ I L + + VA
Sbjct: 157 LDPSDIACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAI 216
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
G H A+T G +Y+WG G + G LGHGN + + P ++ L+ V+ I+CG
Sbjct: 217 HPGGRHAMALTAEGKVYSWGCG--DRGQLGHGNTLGYLDPTLID-ELKSKEVTKIACGAM 273
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+ V S G++F++GDG+ G LGHG+ + +P+++ SL G + ACG +T AV
Sbjct: 274 HSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAV--- 330
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
+ +++WG G G LG+G + + +PT + AL VACG++ +
Sbjct: 331 ----------AGDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSF 380
Query: 313 ALTTSGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
A++ +G V+ GS + LGN + K P ++G L ++ + +H +
Sbjct: 381 AVSANGKVWAWGSGDRFRLGLGNEKVIVK-PREIQGDLKGKKIKRVVASLFHALAIDENG 439
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLV 397
+VY WG G +G+ D D + ++
Sbjct: 440 QVYIWGSQEIGPVGN-DEDAKQQQCML 465
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 30/307 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F G+G G LG +G+C V + +P+ L V++ I GGRHA +
Sbjct: 176 GGIFACGKGHM-GCLG-----LGNCDDVNVPRQIPQLL--PVMVTTVAIHPGGRHAMALT 227
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+G+V+SWG G+LGHG L P LID L + + +ACG H+ AV G +++W
Sbjct: 228 AEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSW 287
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GDG+ G LGHGN ++ +PK++ L G H+ +++CG +T + + ++++G G
Sbjct: 288 GDGSN--GALGHGNNLAQLLPKKIMS-LNGKHIMAVACGECYT-IAVAGDDVWSWGLGGN 343
Query: 213 GVLGHG-DRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG+G + S +P ++E+L KG+ V ACG + AV ++GK++
Sbjct: 344 GELGYGVEMPSYYMPTKIEALFFKGITNV--ACGYATSFAV------------SANGKVW 389
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
WG GD+ RLG G+++ + P + L RV +A+ +G VY GS
Sbjct: 390 AWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449
Query: 329 GQLGNPQ 335
G +GN +
Sbjct: 450 GPVGNDE 456
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
EV+ WG + L + + L P L N++ +ACG V+ +G ++ G G
Sbjct: 126 EVYVWGSKRNLLLAAD-EKNPLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFACGKG 184
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP--WHTAVVTSAGQLFTFGDGTFG 213
+ G LG GN VP+++ L + V++++ P H +T+ G+++++G G G
Sbjct: 185 --HMGCLGLGNCDDVNVPRQIPQLLP-VMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRG 241
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+ P ++ LK + ACG H+ AV+ S GK+F+WGD
Sbjct: 242 QLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVL------------SDGKIFSWGD 289
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G G LGHG+ A+L+P + +L + VACG T+A+ V++ G G+LG
Sbjct: 290 GSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGY 348
Query: 334 --PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+P ++E K + +ACG +++ +V+ WG G RLG G+
Sbjct: 349 GVEMPSYYMPTKIEALFFKG-ITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVI 407
Query: 392 NSPSLVEA-LKDKQVKSIACGTNFTAAI 418
P ++ LK K++K + AI
Sbjct: 408 VKPREIQGDLKGKKIKRVVASLFHALAI 435
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 19/262 (7%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
GI V P+ V + +++ +G +L D K+ P + + L+ L A
Sbjct: 106 GIDVEKSRTDPYKEMRVEPS-EVYVWGSKR-NLLLAADEKNPLEPDKSKLLENLDPSDIA 163
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG + + VV +G +F G G G LG G+ + VP + L+
Sbjct: 164 CG-YDSLFVVS-----------RNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMV 211
Query: 302 CRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
VA G +ALT G VY+ G GQLG+ G L + +L V +IACG
Sbjct: 212 TTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACG 271
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ H + S ++++WG G+NG LGHG+ + P + +L K + ++ACG +T A+
Sbjct: 272 AMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVA 331
Query: 420 ---LHKWVSGVDQSMCSGCRLP 438
+ W G + + G +P
Sbjct: 332 GDDVWSWGLGGNGELGYGVEMP 353
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 174/363 (47%), Gaps = 44/363 (12%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYH 139
IACGG H + + G V++ G G+LG VD + P + AL I +A G YH
Sbjct: 71 IACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIH-IAAGYYH 129
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW--VPKRVNGPLEGIHVSSISCGPWHTAV 197
+ A+T G+LY WG + G LG G + ++ VP +V L GI + ++ G H+
Sbjct: 130 SAAITADGELYMWGKNSN--GQLGLGKKAANAVSVPSKVE-CLNGISIKMVALGSEHSVA 186
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHTA 248
T G+ ++G G G LGHG S+ PR + L+G++ A G+ H+A
Sbjct: 187 ATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSA 246
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
+ E +G +F +G+ + G + + P+ ++ L P +VACG
Sbjct: 247 CIDE------------NGSVFIFGERAMDKFGFREAKNATAPSMISEL--PYSKQVACGG 292
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
T +++SG ++T GS G LG + P R+EG SK+ V +++CG H A +
Sbjct: 293 YHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI- 351
Query: 368 SKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
S+ V+TWG G + G+LG G D P +VE + + ++CG N T
Sbjct: 352 SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHT 411
Query: 416 AAI 418
AI
Sbjct: 412 GAI 414
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 155/333 (46%), Gaps = 33/333 (9%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
WG GRLG G P + A + ++ +ACG HT +T SG +Y G +F
Sbjct: 38 WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYA--AGLNDF 95
Query: 160 GLLGHGNEVSHWV-PKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LG + ++ P V+ P + IH I+ G +H+A +T+ G+L+ +G + G LG
Sbjct: 96 GQLGVSVDKNYTTEPLEVSALPKKIIH---IAAGYYHSAAITADGELYMWGKNSNGQLGL 152
Query: 218 GDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G + +VS+P +VE L G+ A G H+ A + G+ +WG G
Sbjct: 153 GKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATD------------QGEALSWGAGG 200
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCR---------VACGHSLTVALTTSGHVYTMGSP 326
GRLGHG + + L ++ P R VA G + + +G V+ G
Sbjct: 201 SGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGER 260
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+ G +A + +L S +++ACG YH V++S E++TWG NG LG G
Sbjct: 261 AMDKFGFREAKNATAPSMISELPYS--KQVACGGYHTCVISSSGELFTWGSNENGCLGMG 318
Query: 387 DTDDRNSPSLVEALKDKQ-VKSIACGTNFTAAI 418
+ + P +E K V ++CG TAAI
Sbjct: 319 FMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI 351
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 50/307 (16%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G++++WG+ + +G LG G + S+P +E + ++ +A G H+
Sbjct: 135 ADGELYMWGKNS-NGQLGLGKKAANAV-------SVPSKVECLNGISIKMVALGSEHSVA 186
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDALSNMNIELVACGEYHTC 141
QGE SWG GRLGHG +S +L P+LI L + ++ VA G H+
Sbjct: 187 ATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSA 246
Query: 142 AVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ +G ++ +G+ + FG N + P ++ E + ++CG +HT V++S
Sbjct: 247 CIDENGSVFIFGERAMDKFGFREAKNATA---PSMIS---ELPYSKQVACGGYHTCVISS 300
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSS 259
+G+LFT+G G LG G +++ P +E V + +CG HTAA+ E
Sbjct: 301 SGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISE------- 353
Query: 260 SSNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
G +FTWG G G+LG G + P V +V+CG
Sbjct: 354 ------GNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCG 407
Query: 308 HSLTVAL 314
+ T A+
Sbjct: 408 FNHTGAI 414
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 125/377 (33%), Positives = 180/377 (47%), Gaps = 52/377 (13%)
Query: 35 VFIWGEGT--------GDGVLGGGLNRVGSCFGVKMDSSLPKA-LESAVVLDVQNIACGG 85
++ WGEG+ G+GV G R G P+A + AVVL +ACG
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGPVPFRPG-----------PRAPADQAVVL----VACGE 46
Query: 86 RHAALVNKQGEVFSWGEESGGRLGH----GVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
RH L+ G V S G+ S G+LG G + P+LI AL + V+CG+ H+
Sbjct: 47 RHTLLLRDDGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSL 106
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
AV G +Y+WG GT FG LG G +PK +N L V ++CG H+ +T+
Sbjct: 107 AVCNKGRVYSWGAGT--FGQLGTGELGDRLIPKTINA-LSKYKVIQVACGHDHSIALTND 163
Query: 202 GQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G++F++G G LG G D S + P++V +L G+ + A G H+ A+
Sbjct: 164 GRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFAL---------- 213
Query: 261 SNCSSGKLFTWGDGDKGRLGHGD---KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
SG ++ WG + +LG KE P +AAL + V+CG T LT +
Sbjct: 214 --SLSGVVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQN 271
Query: 318 GHVYTMGSPVYGQLG-NPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EVYT 374
G VYT G GQLG N + K P +VE V +ACGSYH V S + ++ +
Sbjct: 272 GSVYTFGDDSAGQLGRNSSSSPKFGPQKVE--WIDGPVSLLACGSYHTLVRISTSGQLLS 329
Query: 375 WGKGANGRLGHGDTDDR 391
+G+G R G T +
Sbjct: 330 FGRGPLQRNRSGTTQSK 346
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 108/234 (46%), Gaps = 25/234 (10%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR------TVRAACGVWHTAAVVEVMVGN 257
L+ +G+G+ G LG G + VS P V G R V ACG HT + +
Sbjct: 2 LYCWGEGSAGQLGLGKGEGVSGP--VPFRPGPRAPADQAVVLVACGERHTLLLRD----- 54
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGH----GDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G + + GD +G+LG G ++ P + AL V+CG ++A
Sbjct: 55 -------DGGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLA 107
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+ G VY+ G+ +GQLG + +L + LSK V ++ACG H LT+ ++
Sbjct: 108 VCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIF 167
Query: 374 TWGKGANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
+WG+ +G+LG G D + SP V AL + +A G + A+ L V G
Sbjct: 168 SWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYG 221
>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
Length = 409
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 140/277 (50%), Gaps = 34/277 (12%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYH 139
A GG H+A V G++++WG+ GRLGH D L PKL++AL + +AC G+
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T +T +++WGDG Y G LG G VP +++ L G+ V + CG + +T
Sbjct: 61 TLCLTDDDTVWSWGDGDY--GKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALT 117
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+G ++T+G G + LGHG V PR+V+ L+G + + A G H E
Sbjct: 118 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------- 170
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G+++TWGD D+G+LG G A P VAAL RVACG + T+A +TS
Sbjct: 171 -----DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS-- 223
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEI 356
P + GKLP +V + + ++EI
Sbjct: 224 -------------KPASAGKLPAQV--PMEYNHLQEI 245
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 120/227 (52%), Gaps = 16/227 (7%)
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+A VT+AG L+T+G G +G LGH D + P+ VE+L+G R V ACG
Sbjct: 6 HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG---------- 55
Query: 254 MVGNSSSSNC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ + C +++WGDGD G+LG G + VP + +L +V CG +
Sbjct: 56 --SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS 113
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
VALT SG VYT G Y +LG+ D + P +V+G K + IA GS H T
Sbjct: 114 VALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDG 172
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
EVYTWG G+LG G T+ P LV AL+ K+V +ACG+ T A
Sbjct: 173 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 219
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 120/240 (50%), Gaps = 22/240 (9%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD++ WG+G R+G D PK +E+ V +IACG A
Sbjct: 12 AAGDLYTWGKGR--------YGRLG--HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQT 61
Query: 91 --VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ V+SWG+ G+LG G P ID+L+ + + V CG + A+T SG
Sbjct: 62 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGA 121
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+YTWG G Y+ LGHG++ P++V G L+G V +I+ G H T G+++T+G
Sbjct: 122 VYTWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG 178
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
D G LG G ++ PR V +L+G + R ACG HT A S+S S+GKL
Sbjct: 179 DNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAW-------STSKPASAGKL 231
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G H A +T+ ++YTWGKG GRLGH D++D+ P LVEAL+ +V IACG+
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60
Query: 417 AICL 420
+CL
Sbjct: 61 TLCL 64
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YH 362
A G + + +T +G +YT G YG+LG+ ++ +L ++ L V +IACGS
Sbjct: 1 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT V++WG G G+LG G +D P +++L V + CG+ F+ A+
Sbjct: 61 TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 116
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 175/366 (47%), Gaps = 41/366 (11%)
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
+ DV +AC +A ++K G++++WG G LG+G ++ P L+ L +++ + VA
Sbjct: 59 IQDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVA 118
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE------------- 181
CG YH A+T G LYTWG+ ++ G LGH + S +P R +
Sbjct: 119 CGNYHMAAITTDGQLYTWGN--FDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQ 176
Query: 182 -GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP--REVESLKGLRTV 238
V ++ G T +++ G +++ G G+LG+ K+V P +++ LK + +
Sbjct: 177 LNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGY-QTKNVDEPTFKQIPDLKNIVQI 235
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
+ + S + S G +F WG G+LG P + L
Sbjct: 236 DSGT--------------DFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGL-- 279
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIA 357
P + +CG AL+T G +YT G GQLG P + D P++++ + +++++
Sbjct: 280 PKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQDIPTPHKIQFDQN---IDKVS 336
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG HV ++ SK ++Y G+G G+LG G +T+ NS L + V IACG + +
Sbjct: 337 CGQAHVGIV-SKNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVMENVIKIACGGSHSF 395
Query: 417 AICLHK 422
A+ K
Sbjct: 396 AVVNQK 401
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 167/339 (49%), Gaps = 16/339 (4%)
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
++ V Q ++++WG + G+LG G P+L+ ++ VAC + A+ SG
Sbjct: 23 SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKSSVSAAIDKSG 79
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
LYTWG FGLLG+G + VP V L+ + ++CG +H A +T+ GQL+T+
Sbjct: 80 KLYTWGRS--KFGLLGNGQVENINVPSLVQ-CLKHLDFKFVACGNYHMAAITTDGQLYTW 136
Query: 208 GDGTFGVLGHGDRKSVSIP--REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G+ G LGH S +P + E K L + + V V +V +G+ + S
Sbjct: 137 GNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSE 196
Query: 266 -GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G +++ G KG LG+ K PT N ++ G +VAL + G+++ G
Sbjct: 197 DGNVYSVGLNKKGILGYQTKNVD-EPTFKQIPDLKNIVQIDSGTDFSVALDSDGNMFAWG 255
Query: 325 SPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
S +GQLG P + P +++G L K +++ +CG + L++ +YTWG G +G+L
Sbjct: 256 SNYFGQLGTPSPSVVQTPQQIKG-LPK--IKQFSCGEQFIGALSTDGVLYTWGFGGDGQL 312
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
G D +P ++ D+ + ++CG + +K
Sbjct: 313 GTPSKQDIPTPHKIQF--DQNIDKVSCGQAHVGIVSKNK 349
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 41/321 (12%)
Query: 128 MNIELVACGEYHTCAVTLSGD-LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ I + T + S + LY WG NFG LG GN +S + P+ V P++ V
Sbjct: 10 LKIAFIGSSVTFTSSFVFSQEQLYAWGWN--NFGQLGIGNSISQYSPQLV--PIQ--DVL 63
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++C +A + +G+L+T+G FG+LG+G +++++P V+ LK L ACG +H
Sbjct: 64 FVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACGNYH 123
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLV------------PTCV 293
AA+ + G+L+TWG+ D G+LGH D AKL +
Sbjct: 124 MAAIT------------TDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKL 171
Query: 294 AALVEPNF--CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS 351
LV+ NF +VA G T+ L+ G+VY++G G LG + P + K+
Sbjct: 172 PELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKNVDEPTFKQIPDLKN 231
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
V +I G+ L S ++ WG G+LG +P ++ L ++K +CG
Sbjct: 232 IV-QIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKGL--PKIKQFSCG 288
Query: 412 TNFTAAI----CLHKWVSGVD 428
F A+ L+ W G D
Sbjct: 289 EQFIGALSTDGVLYTWGFGGD 309
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 168/386 (43%), Gaps = 68/386 (17%)
Query: 7 DAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
D V+ S+VS++ D G ++ WG + G+LG G + ++
Sbjct: 61 DVLFVACKSSVSAAI--------DKSGKLYTWGR-SKFGLLGNGQVE---------NINV 102
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP------- 119
P ++ LD + +ACG H A + G++++WG G+LGH D+ P
Sbjct: 103 PSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEY 162
Query: 120 -------KLIDALS-NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW 171
KL + + N ++ VA G+ T ++ G++Y+ G G+LG+
Sbjct: 163 QKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKK--GILGYQT----- 215
Query: 172 VPKRVNGPL-----EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
K V+ P + ++ I G + + S G +F +G FG LG V P
Sbjct: 216 --KNVDEPTFKQIPDLKNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTP 273
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
++++ L ++ + +CG E +G S + G L+TWG G G+LG K+
Sbjct: 274 QQIKGLPKIK--QFSCG--------EQFIGALS----TDGVLYTWGFGGDGQLGTPSKQD 319
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN--RV 344
+PT + N +V+CG + V + + +Y G GQLG ++ + PN R
Sbjct: 320 --IPTPHKIQFDQNIDKVSCGQA-HVGIVSKNKLYMHGRGKEGQLGRG-SETESPNSSRY 375
Query: 345 EGKLSKSFVEEIACGSYH-VAVLTSK 369
L V +IACG H AV+ K
Sbjct: 376 SPLLVMENVIKIACGGSHSFAVVNQK 401
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 168/338 (49%), Gaps = 25/338 (7%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H A+V G+++ +G G+LG G + V P + AL +L CG H
Sbjct: 56 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNH 115
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T +G++Y G G LG G+ ++ + ++ G + +A VT
Sbjct: 116 TLVYTENGNMYAAGGNGE--GQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 173
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQLF +GD + G +G D+ VS+P +V+ K + ++ +CG +H+A +
Sbjct: 174 EDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSI--SCGYYHSAFIT-------- 223
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G+L+T+G+ + G+LG ++ K VP V ++E +VACG TV LT +
Sbjct: 224 ----GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTET 278
Query: 318 GHVYTMGSPVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G YGQLG+ K +P V+ L K + I CG H AV+ ++T+
Sbjct: 279 G-VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRKCKIRNITCGESHTAVIAENGLMFTF 336
Query: 376 GKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G G +G+LG G+ + N P+L V +ACG
Sbjct: 337 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 374
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 132/277 (47%), Gaps = 50/277 (18%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
ISCG HTAVVT G+L+ FG +G LG G + +V P V++LK +T A CG HT
Sbjct: 57 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116
Query: 248 AAVVE-----VMVGN------------------------------------SSSSNCSSG 266
E GN +S++ G
Sbjct: 117 LVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDG 176
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+LF WGD +G++G DK VP C + +P ++CG+ + +T G +YT G P
Sbjct: 177 QLFVWGDNSEGQIGLADKTYVSVP-CQVDVGKP-ISSISCGYYHSAFITGDGELYTFGEP 234
Query: 327 VYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG + ++P V G + K V ++ACG H VLT +T VYT+G G G+L
Sbjct: 235 ENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGEHTVVLT-ETGVYTFGLGQYGQL 291
Query: 384 GHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAIC 419
GHG + S P V+ L+ ++++I CG + TA I
Sbjct: 292 GHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIA 328
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 24/193 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ + +G +G K S+P ++ V + +I+CG H+A +
Sbjct: 176 GQLFVWGDNS-EGQIG---------LADKTYVSVPCQVD--VGKPISSISCGYYHSAFIT 223
Query: 93 KQGEVFSWGEESGGRLG----HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
GE++++GE G+LG +S V P ++ + +N VACG HT +T +G
Sbjct: 224 GDGELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEKVN--KVACGGEHTVVLTETG- 279
Query: 149 LYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+YT+G G Y G LGHG + VPK V L + +I+CG HTAV+ G +FTF
Sbjct: 280 VYTFGLGQY--GQLGHGTLLFKTSVPKSVKH-LRKCKIRNITCGESHTAVIAENGLMFTF 336
Query: 208 GDGTFGVLGHGDR 220
GDG G LG G+
Sbjct: 337 GDGRHGKLGLGEE 349
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 42 TGDGVLGGGLNRVGSCF--GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T GV GL + G + +S+PK+++ ++NI CG H A++ + G +F+
Sbjct: 276 TETGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFT 335
Query: 100 WGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVACGEYH 139
+G+ G+LG G + ++ P L + + LVACG H
Sbjct: 336 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 377
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 172/348 (49%), Gaps = 28/348 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+++ A G RH+ L+ G V + G+ S G+LG P LI AL +N++L++CG
Sbjct: 22 ELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCG 81
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+ ++ P +V L GI + +SCG +H+
Sbjct: 82 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEL-NFTPMKVKA-LAGIKIIQVSCGHYHSL 139
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQ+F++G+ + G LG G + S P+ V+SL+G+ + A G H+ A+
Sbjct: 140 ALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFAL----- 194
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
SG F WG + G+L G+ P + AL E ++CG T
Sbjct: 195 -------SLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTA 247
Query: 313 ALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT- 370
LT G V+T G GQLG+ P A+ + P VEG V +I CGSYH V T
Sbjct: 248 VLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLVYVYTTR 305
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPS----LVEA--LKDKQVKSIACGT 412
+V ++G+G + +D S L+ A L + QVK I GT
Sbjct: 306 QVISFGRGPSDTTSSTRSDALTKNSDVSCLISADDLVNVQVKHIFAGT 353
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 133/257 (51%), Gaps = 23/257 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDAL 125
P +++ L+V ++CG H+ V +G VF+WG S G+LG G ++ P + AL
Sbjct: 64 PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPKRVNGPLEGIH 184
+ + I V+CG YH+ A++ G +++WG+ ++ G LG G E +S P+RV LEGI
Sbjct: 124 AGIKIIQVSCGHYHSLALSQDGQVFSWGNNSH--GQLGLGKEFLSQESPQRVKS-LEGIP 180
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVS--IPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G G L G+ V PR + +LK L V +
Sbjct: 181 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYIS 240
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+GD G+LGHG K P V ++
Sbjct: 241 CGSEHTAVLTQ------------DGKVFTFGDNSSGQLGHGPTAEKRGPQLVEG-IDGLV 287
Query: 302 CRVACG--HSLTVALTT 316
++ CG H+L TT
Sbjct: 288 SQIDCGSYHTLVYVYTT 304
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K +
Sbjct: 69 ALETLNVDLLSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKELN 114
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLID 123
P +++ + + ++CG H+ +++ G+VFSWG S G+LG G + P+ +
Sbjct: 115 FTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVK 174
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++LSG + WG L G+ V + P+ + G L+
Sbjct: 175 SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSI-GALKE 233
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD + G LGHG P+ VE + GL + + C
Sbjct: 234 LGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGLVS-QIDC 292
Query: 243 GVWHTAAVV 251
G +HT V
Sbjct: 293 GSYHTLVYV 301
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 19/243 (7%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ S G + GD + G LG P +++L+ L +
Sbjct: 20 GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P V AL
Sbjct: 80 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIK 127
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIAC 358
+V+CGH ++AL+ G V++ G+ +GQLG + P RV+ L + ++A
Sbjct: 128 IIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKS-LEGIPLAQVAA 186
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
G H L+ + WG G+L G+ P + ALK+ V I+CG+ T
Sbjct: 187 GGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246
Query: 416 AAI 418
A +
Sbjct: 247 AVL 249
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
+ + A G H +L S V+ G + G+LG R P L++AL+ V ++CG
Sbjct: 23 LRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGK 82
Query: 413 NFTAAICLHK 422
+ A+C HK
Sbjct: 83 EHSLAVC-HK 91
>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
Length = 363
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/340 (31%), Positives = 164/340 (48%), Gaps = 27/340 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V N++CG H+A+V G+++++G G+LGHG P ++ L + +VACG
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT A T SG LY++G G G LGHG+ VPK + G L+ ++CG +A
Sbjct: 97 NHTIAATESGHLYSFGCG--GDGQLGHGDAEDSHVPKIIEG-LDVQKYKHLACGSDFSAA 153
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T G+L+T+G G G G+ IP + +R V +CG +H A V E
Sbjct: 154 ITENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGKVRMV--SCGYYHMAVVTE----- 204
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGHSLTVALT 315
G L+ G+ + G+LG D E + + + +E ACG T +T
Sbjct: 205 -------DGSLYMCGEKEGGKLGL-DHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVT 256
Query: 316 TSGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+G VYT G GQ LG+ + + P R+ K ++CG AV+T +Y
Sbjct: 257 KNGSVYTFGQGNQGQLGLGSSMMETEFPERIP-LFEKVKARTVSCGESFTAVITKHGNLY 315
Query: 374 TWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
T+G G +G+LG GD N+ P V+ + VK + CG
Sbjct: 316 TFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 151/334 (45%), Gaps = 71/334 (21%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V ++SCG H+AVVT+ G+L+TFG +G LGHG+ KS + P V+ LK + ACG
Sbjct: 37 VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
HT A E SG L+++G G G+LGHGD E VP + L + +
Sbjct: 97 NHTIAATE------------SGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHL 144
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE------------------- 345
ACG + A+T +G +YT GS GQ G + D ++P R+
Sbjct: 145 ACGSDFSAAITENGELYTWGSCGEGQNGLGE-DTEIPTRLHLHGKVRMVSCGYYHMAVVT 203
Query: 346 -------------GKLS---------------KSFVEEI---ACGSYHVAVLTSKTEVYT 374
GKL KS +++ ACG+ AV+T VYT
Sbjct: 204 EDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYT 263
Query: 375 WGKGANGRLGHGDTD-DRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQ 429
+G+G G+LG G + + P + + + ++++CG +FTA I L+ + G
Sbjct: 264 FGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGRHG 323
Query: 430 SMCSGCRLPFNNF---KRKRHNCYNCGLVFCHSC 460
+ G N F K KR N + +V C C
Sbjct: 324 KLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGC 357
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 134/297 (45%), Gaps = 48/297 (16%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ +G G GDG LG G DS +PK +E V +++ACG +A +
Sbjct: 106 GHLYSFGCG-GDGQLG---------HGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAIT 155
Query: 93 KQGEVFSWGEESGGRLGHGVDSDV-----LHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+ GE+++WG G+ G G D+++ LH K + +V+CG YH VT G
Sbjct: 156 ENGELYTWGSCGEGQNGLGEDTEIPTRLHLHGK---------VRMVSCGYYHMAVVTEDG 206
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
LY G+ L H + +++ + + V+ +CG TAVVT G ++TF
Sbjct: 207 SLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVA--ACGAEFTAVVTKNGSVYTF 264
Query: 208 GDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
G G G LG G P + + ++ +CG TA + + G
Sbjct: 265 GQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITK------------HG 312
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
L+T+GDG G+LG GD+ C + +P +V ++ TV + T G + +
Sbjct: 313 NLYTFGDGRHGKLGLGDE-------CFSNTFKPE--KVKRFNNFTVKMVTCGGCHML 360
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 169/361 (46%), Gaps = 43/361 (11%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
IACG H AL+ K G +F +G + G+LG G V P + AL + LVACG HT
Sbjct: 41 IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT 100
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G +++ G + G LG G+ +R++ V ++ G +A +T
Sbjct: 101 LICTAQGKVFSSGGNSE--GQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAALTE 158
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+G+LF +GD T G +G P+EV+ + V +CG +H+A V
Sbjct: 159 SGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGPISWV--SCGYYHSAFVT--------- 207
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+ G L+T+G+ D G+LG ++ VP V ++ EP +VACG TVALT
Sbjct: 208 ---ADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEP-VTQVACGGGHTVALTEE- 262
Query: 319 HVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
++T G +GQLG+ + +LP VE K V ++ACG H AV+T +YT+G
Sbjct: 263 RLFTFGLGQFGQLGHGTFIFESRLPRPVE-HFKKGRVCQVACGENHTAVITDGGLLYTFG 321
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCR 436
G +G+LG G+ + N F +C GV + C GC
Sbjct: 322 DGRHGKLGLGEENFTN--------------------QFKPTVCSRFLKYGVQAATCGGCH 361
Query: 437 L 437
+
Sbjct: 362 M 362
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 156/308 (50%), Gaps = 34/308 (11%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
KAL++ VL V ACG H + QG+VFS G S G+LG G + + I A +
Sbjct: 83 KALKTEKVLLV---ACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDS 139
Query: 128 MN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN--GPLEGIH 184
+ ++++A G + A+T SG L+ WGD T G +G E P+ V+ GP
Sbjct: 140 LGPVKMLAAGSNTSAALTESGKLFMWGDNTE--GQIGLAKESHAPSPQEVDVGGP----- 192
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK--SVSIPREVESLKGLRTVRAAC 242
+S +SCG +H+A VT+ G L+TFG+ G LG + +P+ V+S+K T + AC
Sbjct: 193 ISWVSCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVT-QVAC 251
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTCVAALVEPN 300
G HT A+ E +LFT+G G G+LGHG E++L P V +
Sbjct: 252 GGGHTVALTEE-------------RLFTFGLGQFGQLGHGTFIFESRL-PRPVEHFKKGR 297
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD--GKLPNRVEGKLSKSFVEEIAC 358
C+VACG + T +T G +YT G +G+LG + + + V + K V+ C
Sbjct: 298 VCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATC 357
Query: 359 GSYHVAVL 366
G H+ VL
Sbjct: 358 GGCHMVVL 365
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSY 361
++ACG T +T +G ++ GS +GQLG + P V+ L V +ACG
Sbjct: 40 KIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKA-LKTEKVLLVACGRN 98
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD-KQVKSIACGTNFTAAI 418
H + T++ +V++ G + G+LG GD ++R + + A VK +A G+N +AA+
Sbjct: 99 HTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAAL 156
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 195/447 (43%), Gaps = 67/447 (14%)
Query: 13 LSSAVSSSSQGSGHDDGDALGDVFIWGEGTG-----DGVLGGGLNRVGSCFG-------- 59
+SS ++S G+ D+G G +WG+ G + + G C
Sbjct: 1674 ISSRMTSVRAGAA-DEGPVPGLALVWGKPLGLSLDEEAHISQGGRSATLCLRPTAENASP 1732
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
++M +S P+ L V IACG RH AL+ ++++G GRLGHG D P
Sbjct: 1733 IRM-ASFPRPLRRVV-----QIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEP 1786
Query: 120 -------KLIDA--LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
LI+A + + V+CG HT AVT SGDL+ +G G G LG G S
Sbjct: 1787 VSVGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWG--EAGRLGTGETGSS 1844
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
P RV + ++++++CG HT +T G++F FG G G LG+G +P V+
Sbjct: 1845 LYPTRVT---DLQNIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQ 1901
Query: 231 SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
L+ R G H+ A+ + G + TWG G G LGHGD++ L P
Sbjct: 1902 GLEDYRIAAIDAGECHSCAL------------STEGDVLTWGFGSSGALGHGDRDNCLEP 1949
Query: 291 TCV-------AALVEPN-------FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---- 332
+ A E N +ACG T+A T+ G +Y G GQL
Sbjct: 1950 RRIEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYI 2009
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
P+ P R+ + S + +ACG++ AV T++ ++ WG A G + DD
Sbjct: 2010 TAPEMVVLTPQRIRVP-TNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDA 2068
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+ L + + +ACG AI
Sbjct: 2069 RVKR-IGVLGEFEFSQVACGAYHAVAI 2094
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 138/308 (44%), Gaps = 36/308 (11%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
+CG H V G++F +G GRLG G L+P + L N I VACG HT
Sbjct: 1810 SCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQN--IAAVACGREHTL 1867
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+T G ++ +G G G LG+G+E +P V G LE +++I G H+ +++
Sbjct: 1868 ALTRKGRVFAFGAGFG--GRLGNGSETDEELPFAVQG-LEDYRIAAIDAGECHSCALSTE 1924
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVE------SLKGLRTVRA--------ACGVWHT 247
G + T+G G+ G LGHGDR + PR +E ++ G + ACG +HT
Sbjct: 1925 GDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT 1984
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG----HGDKEAKLVPTCVAALVEPNFCR 303
A S G L+ WGD G+L + L P +
Sbjct: 1985 LAAT------------SDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRS 2032
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
VACG + T GH++ GSP G + D R+ G L + ++ACG+YH
Sbjct: 2033 VACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDARVKRI-GVLGEFEFSQVACGAYHA 2091
Query: 364 AVLTSKTE 371
+T K E
Sbjct: 2092 VAITRKLE 2099
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 141/316 (44%), Gaps = 43/316 (13%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI---- 188
+ACG HT +T LYT+G G G LGHGN+ P V I +
Sbjct: 1748 IACGYRHTALITDDRHLYTFGHG--ECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDVGG 1805
Query: 189 ----SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
SCG HT VT++G LF FG G G LG G+ S P V L+ + V ACG
Sbjct: 1806 VVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIAAV--ACGR 1863
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
HT A+ G++F +G G GRLG+G + + +P V L + +
Sbjct: 1864 EHTLALTR------------KGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAI 1911
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLS-------------K 350
G + AL+T G V T G G LG+ D L P R+EG +
Sbjct: 1912 DAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASET 1971
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN----SPSLVEALKDKQVK 406
S V IACGSYH TS +Y WG A G+L +P + + ++
Sbjct: 1972 SVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIR 2031
Query: 407 SIACGTNFTAAICLHK 422
S+ACGT FT+A+C ++
Sbjct: 2032 SVACGT-FTSAVCTNQ 2046
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 140/312 (44%), Gaps = 64/312 (20%)
Query: 29 GDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA---CGG 85
GD G F WGE G LG G GS +L V D+QNIA CG
Sbjct: 1823 GDLFG--FGWGEA---GRLGTG--ETGS------------SLYPTRVTDLQNIAAVACGR 1863
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
H + ++G VF++G GGRLG+G ++D P + L + I + GE H+CA++
Sbjct: 1864 EHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALST 1923
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-------------VSSISCGP 192
GD+ TWG G+ G LGHG+ + P+R+ GP G VS+I+CG
Sbjct: 1924 EGDVLTWGFGSS--GALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGS 1981
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLG----HGDRKSVSIPREVE--SLKGLRTVRAACGVWH 246
+HT TS G L+ +GD G L V P+ + + G+R+V ACG +
Sbjct: 1982 YHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRSV--ACGTFT 2039
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGD---GDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
+A + G LF WG G+ L D K + L E F +
Sbjct: 2040 SAVCT------------NQGHLFLWGSPAAGNGAPLEVDDARVKR----IGVLGEFEFSQ 2083
Query: 304 VACGHSLTVALT 315
VACG VA+T
Sbjct: 2084 VACGAYHAVAIT 2095
>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
Length = 1271
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 162/335 (48%), Gaps = 39/335 (11%)
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG--------TYNFGLLGHGNE 167
VL PK + L+ I VACG H +T +GD+Y++GD T N+
Sbjct: 485 VLRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADND 544
Query: 168 VSHWVPKRV--NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI 225
+ + K + L ++ ISCG H+ +T AG+L+T+G G G LGHGD + ++
Sbjct: 545 YTRSISKELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAV 604
Query: 226 PREVESLKGLRTVRAACGV----WHTAA-----------VVEVMVG-NSSSSNCSSGKLF 269
PR+V SL A+CG+ W + V+ G N +++ G +F
Sbjct: 605 PRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIF 664
Query: 270 TWGDGDKGR--LGHGDKEAKLVPTCVAALVE----PNFCRVACGHSLTVALTTSGHVYTM 323
TWG +G+ LG+ DK+ ++VP CV L E VACG++ TV LT SG +Y+
Sbjct: 665 TWGKTGEGQCGLGYVDKD-QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYSW 723
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G YGQL Q LP+ + + + + CG++H T K ++ WG + G
Sbjct: 724 GLGEYGQLARVQ----LPS--DALCAPDQLTRVYCGAFHSIATTEKRVMFAWGLNSYGAC 777
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G T +++ P ++ + +ACG +T A+
Sbjct: 778 GLGHTANKDKPERIDCFSSQTELVVACGHKYTIAL 812
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 61/323 (18%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
+ + +L KAL + I+CG +H+ + GE+++WG GRLGHG D P
Sbjct: 549 ISKELALEKALHRTTI---AMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVP 605
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ + +L ++ +CG GD W D P ++ G
Sbjct: 606 RKVMSLLRESVASASCG---------LGD-NKWRD-----------------TPHQIVGF 638
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTF---GDGTFGVLGHGDRKSVSIPREVESLK--- 233
+G +S++ CG TA + G +FT+ G+G G LG+ D+ V +PR VE L+
Sbjct: 639 PQGTRISNVVCGWNFTAALDRQGNIFTWGKTGEGQCG-LGYVDKDQV-VPRCVEKLREVA 696
Query: 234 -GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
G V ACG HT + +SG+L++WG G+ G+L V
Sbjct: 697 AGSAAVDVACGYTHTVVLT------------ASGELYSWGLGEYGQLAR-------VQLP 737
Query: 293 VAALVEPN-FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSK 350
AL P+ RV CG ++A T ++ G YG G A+ P R++ S+
Sbjct: 738 SDALCAPDQLTRVYCGAFHSIATTEKRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQ 797
Query: 351 SFVEEIACGSYHVAVLTSKTEVY 373
+ + +ACG + L +Y
Sbjct: 798 TEL-VVACGHKYTIALEVDPALY 819
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
N S S ++ WG + G L P V+ L +VACG + LT+
Sbjct: 458 NDHQSEEPSSHMWVWG---RPPSLEGGTPLVLRPKQVSLLNGQPIVQVACGGEHLLYLTS 514
Query: 317 SGHVYTMG-------SPVYGQLGNPQADGKLPNRV------EGKLSKSFVEEIACGSYHV 363
+G VY+ G + V AD + E L ++ + I+CG+ H
Sbjct: 515 TGDVYSYGDNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAMISCGAQHS 574
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+T E+YTWG G +GRLGHGD DR P V +L + V S +CG
Sbjct: 575 LAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCG 622
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 169/362 (46%), Gaps = 26/362 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA GG H + G V+ WG+ G+LG G +D
Sbjct: 204 GTTTDRSTPVAV-SGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRST 262
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P + L++ + +A G +HTCA T SG + WG N+ G LG G + P V+
Sbjct: 263 PVAVSGLAS-GVTAIAAGGFHTCARTSSGGVMCWG---ANWSGQLGDGTTTARSTPVAVS 318
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G G V++I+ G HT +TS+G ++ +G FG LG G S P V L T
Sbjct: 319 GLASG--VTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVT 376
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
AA G +HT A++ SSG + WG G+LG G + P V+ LV
Sbjct: 377 AIAA-GDFHTCALM------------SSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLV 423
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI 356
+A G T A T+SG V G GQLG+ D P V G S V I
Sbjct: 424 S-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL--GSGVTAI 480
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G H L S V+ WG+ ++G+LG G T DR +P V L +V +IA G T
Sbjct: 481 AAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLP-SEVTAIASGGVHTC 539
Query: 417 AI 418
A+
Sbjct: 540 AL 541
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 165/361 (45%), Gaps = 26/361 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA G H + G V WG+ G+LG G +D
Sbjct: 102 GTTTDRSTPVAV-SGLTSGVTAIAAGYAHTCALMSSGGVMCWGDNWSGQLGDGTTTDRST 160
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P + L++ + +A G+ HTCA T SG + WGD N+ G LG G P V+
Sbjct: 161 PVAVSGLAS-GVTAIAAGDDHTCARTSSGGVMCWGD---NWSGQLGDGTTTDRSTPVAVS 216
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G G V++I+ G HT + S+G ++ +GD G LG G S P V L T
Sbjct: 217 GLGSG--VTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVT 274
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
AA G HT A SSG + WG G+LG G A+ P V+ L
Sbjct: 275 AIAAGGF-HTCA------------RTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLA 321
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI 356
+A G S T ALT+SG V+ G +GQLG+ D P V G S V I
Sbjct: 322 S-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL--GSGVTAI 378
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G +H L S V WG+ +G+LG G T R++P V L V +IA G + T
Sbjct: 379 AAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLV-SGVTAIAAGDDHTC 437
Query: 417 A 417
A
Sbjct: 438 A 438
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 155/343 (45%), Gaps = 25/343 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA GG H + G V WG G+LG G +D P + L++ + +A G
Sbjct: 69 VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGY 127
Query: 138 YHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HTCA+ SG + WGD N+ G LG G P V+G G V++I+ G HT
Sbjct: 128 AHTCALMSSGGVMCWGD---NWSGQLGDGTTTDRSTPVAVSGLASG--VTAIAAGDDHTC 182
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
TS+G + +GD G LG G S P V L T AA G HT A++
Sbjct: 183 ARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGS-HTCALM----- 236
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SSG ++ WGD G+LG G + P V+ L +A G T A T+
Sbjct: 237 -------SSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLAS-GVTAIAAGGFHTCARTS 288
Query: 317 SGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
SG V G+ GQLG+ + P V G S V IA G H LTS V+ W
Sbjct: 289 SGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASG--VTAIAAGDSHTCALTSSGGVWCW 346
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G+LG G T DR++P V L V +IA G T A+
Sbjct: 347 GYNFFGQLGDGTTTDRSTPVAVSGLG-SGVTAIAAGDFHTCAL 388
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 162/361 (44%), Gaps = 26/361 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA G H + G V WG G+LG G +
Sbjct: 357 GTTTDRSTPVAV-SGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRST 415
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P + L + + +A G+ HTCA T SG + WGD N+ G LG G P V+
Sbjct: 416 PVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGD---NWSGQLGDGTTTDRSTPVAVS 471
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G G V++I+ G HT + S+G ++ +G + G LG G P V L T
Sbjct: 472 GLGSG--VTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVT 529
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
A+ GV HT A+ SSG + WG G+LG G A+ P V+ L
Sbjct: 530 AIASGGV-HTCALT------------SSGGVMCWGANWSGQLGDGTTTARSTPVAVSGL- 575
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEI 356
+A G T ALT+SG V+ G+ GQLG+ + P V G S V I
Sbjct: 576 PSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGL--PSGVTAI 633
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A GS+H LTS V+ WG +G+LG G D ++P V L V +IA G T
Sbjct: 634 AAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGLP-SGVTAIAAGRFHTC 692
Query: 417 A 417
A
Sbjct: 693 A 693
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 161/362 (44%), Gaps = 26/362 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA G H G V WG+ G+LG G +D
Sbjct: 153 GTTTDRSTPVAV-SGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRST 211
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P + L + + +A G HTCA+ SG ++ WGD N+ G LG G P V+
Sbjct: 212 PVAVSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGD---NWSGQLGDGTTTDRSTPVAVS 267
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G G V++I+ G +HT TS+G + +G G LG G + S P V L T
Sbjct: 268 GLASG--VTAIAAGGFHTCARTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLASGVT 325
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
AA G HT A+ SSG ++ WG G+LG G + P V+ L
Sbjct: 326 AIAA-GDSHTCALT------------SSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGL- 371
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEI 356
+A G T AL +SG V G GQLG+ + P V G +S V I
Sbjct: 372 GSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG--VTAI 429
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G H TS V WG +G+LG G T DR++P V L V +IA G + T
Sbjct: 430 AAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLG-SGVTAIAAGGSHTC 488
Query: 417 AI 418
A+
Sbjct: 489 AL 490
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 159/362 (43%), Gaps = 28/362 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G S P A+ S +V V IA G H G V WG+ G+LG G +D
Sbjct: 408 GTTTTRSTPVAV-SGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRST 466
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + + +A G HTCA+ SG ++ WG + G LG G P V+G
Sbjct: 467 PVAVSGLGS-GVTAIAAGGSHTCALMSSGGVWCWGR--NSSGQLGDGTTTDRGTPVAVSG 523
Query: 179 -PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL-KGLR 236
P E V++I+ G HT +TS+G + +G G LG G + S P V L G+
Sbjct: 524 LPSE---VTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSGVM 580
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ A G HT A+ SSG ++ WG G+LG G A+ P V+ L
Sbjct: 581 AIAA--GDLHTCALT------------SSGGVWCWGANSSGQLGDGTTTARSTPVAVSGL 626
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEE 355
+A G T ALT+SG V+ G+ GQLG+ D P V G S V
Sbjct: 627 -PSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL--PSGVTA 683
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
IA G +H T V+ W G+LG G D ++P V L V +IA G T
Sbjct: 684 IAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLV-SGVTAIAAGVVHT 742
Query: 416 AA 417
A
Sbjct: 743 CA 744
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 150/330 (45%), Gaps = 25/330 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D S P A+ S + V IA GG H + G V+ WG S G+LG G +D
Sbjct: 459 GTTTDRSTPVAV-SGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT 517
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P + L + + +A G HTCA+T SG + WG N+ G LG G + P V+
Sbjct: 518 PVAVSGLPS-EVTAIASGGVHTCALTSSGGVMCWG---ANWSGQLGDGTTTARSTPVAVS 573
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G G+ +I+ G HT +TS+G ++ +G + G LG G + S P V L T
Sbjct: 574 GLPSGVM--AIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVT 631
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
AA G +HT A+ SSG ++ WG G+LG G P V+ L
Sbjct: 632 AIAA-GSFHTCALT------------SSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL- 677
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI 356
+A G T A T SG V+ S YGQLG+ D P V G +S V I
Sbjct: 678 PSGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGLVSG--VTAI 735
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
A G H TS V WG ++G+LG G
Sbjct: 736 AAGVVHTCARTSSGGVMCWGANSSGQLGDG 765
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 165/343 (48%), Gaps = 27/343 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ I CGG+H+ + G V++ G S G+LGH + + P+ + AL I LV+CG+
Sbjct: 35 LKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGH--NKPGITPEFVGALDTQKITLVSCGQ 92
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV G ++ WG G G LG G E + +P+ + L ++ + CG H
Sbjct: 93 AHSLAVNEQGQVFAWGAGEE--GQLGLGTTETAVRIPRLIKR-LCDHRIAQVMCGNQHCI 149
Query: 197 VVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQLFT+G T G LG G S P+ ++SL G+ + G
Sbjct: 150 ALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAG------------ 197
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G+ S + SG +F WG G+LG D + + VP + L ++CG T ALT
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALT 257
Query: 316 TSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
G ++T G +GQLG+ A+ LP RV +L + V +I CG +H +A S VY
Sbjct: 258 KDGGLFTFGDGSWGQLGHGSTANELLPRRVL-ELMGTEVSQITCGRHHTLAFAPSSGGVY 316
Query: 374 TWGKGANGRLGHGDTDDRNSP-----SLVEALKDKQVKSIACG 411
+G ++G+LG G SP S + V I CG
Sbjct: 317 AFGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCG 359
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 22/326 (6%)
Query: 97 VFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+ WG+ G+LG GV+ + + P+ + + ++ + CG H+ + G +YT G
Sbjct: 1 MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ G LGH P+ V G L+ ++ +SCG H+ V GQ+F +G G G L
Sbjct: 61 SC--GQLGHNK--PGITPEFV-GALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQL 115
Query: 216 GHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G G ++ V IPR ++ L R + CG H A+ G+LFTWG
Sbjct: 116 GLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIAL------------SKDGQLFTWGQN 163
Query: 275 DKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG- 332
G+LG G E +KL P + +L ++ G + AL+ SG V+ G GQLG
Sbjct: 164 TSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
N D +P ++ S+ V I+CG H A LT ++T+G G+ G+LGHG T +
Sbjct: 224 NDIQDRAVPCHIKFLRSQKVVH-ISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANEL 282
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
P V L +V I CG + T A
Sbjct: 283 LPRRVLELMGTEVSQITCGRHHTLAF 308
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 29/287 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A+D +++L S + S G VF WG G +G LG G
Sbjct: 79 ALDTQKITLVSCGQAHSLAVNEQ-----GQVFAWGAGE-EGQLGLGTTETAV-------- 124
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLID 123
+P+ ++ + + CG +H ++K G++F+WG+ + G+LG G + L P+ +
Sbjct: 125 RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLK 184
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+ + + + G H+ A++LSG ++ WG G LG + VP + L
Sbjct: 185 SLAGIPLAKITAGGDHSFALSLSGAVFGWGKN--KAGQLGLNDIQDRAVPCHIKF-LRSQ 241
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
V ISCG HTA +T G LFTFGDG++G LGHG + +PR V L G + CG
Sbjct: 242 KVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCG 301
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
HT A SSG ++ +G G+LG G A P
Sbjct: 302 RHHTLAFAP-----------SSGGVYAFGCNSHGQLGTGVLSADKSP 337
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 148/296 (50%), Gaps = 28/296 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+ACG H ALV + G ++++G G+LG G P + +L + +LVACG HT
Sbjct: 40 VACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G +Y WG G+ G LG G + + P ++ + I S+SCG +HTAVVT
Sbjct: 100 LIATGDGKVYVWGGGSE--GQLGLGEDTTECTEPTLLDFDSKAI---SVSCGYYHTAVVT 154
Query: 200 SAGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
G L+TFG+ +G LG + D S P++V +K + CG HT A+ E
Sbjct: 155 EDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTAIAE----- 208
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAK-LVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG ++T+G+G G+LGHG+ + P V + + +CG + T +T
Sbjct: 209 -------SGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVITG 261
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVE----GKLSKSFVEEIACGSYHVAVLTS 368
GH+YT G +G+LG D N+ + +K V+ +ACG H+ V+ S
Sbjct: 262 KGHLYTFGDGRHGKLG--LGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIAS 315
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 143/292 (48%), Gaps = 36/292 (12%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ +++CG HTA+VT G+L+TFG +G LG G K+ S P V+SLK + ACG
Sbjct: 37 ICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGR 96
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCR 303
HT + G+ GK++ WG G +G+LG G+ + PT + +
Sbjct: 97 SHTL----IATGD--------GKVYVWGGGSEGQLGLGEDTTECTEPTLLD--FDSKAIS 142
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD---GKLPNRVEGKLSKSFVEEIACGS 360
V+CG+ T +T G++YT G YG+LG +D P +V G K V+ + CG
Sbjct: 143 VSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTG--IKEKVKFVVCGG 200
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDT-DDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
H + VYT+G GA+G+LGHG++ + +P VE +D K +CG NFTA I
Sbjct: 201 GHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVIT 260
Query: 420 ----LHKWVSGV-------DQSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSC 460
L+ + G D+S + F FK R N + V C C
Sbjct: 261 GKGHLYTFGDGRHGKLGLGDESFTN----QFRPFKVARFNKFQVQWVACGGC 308
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 144/293 (49%), Gaps = 24/293 (8%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ N I VACG+ HT VT +G LYT+ G+ ++G LG G+ + P V L+
Sbjct: 32 IRNDRICAVACGDEHTALVTENGRLYTF--GSNDWGQLGLGHTKTASKPSCVKS-LKHEK 88
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
++CG HT + T G+++ +G G+ G LG G+ + + + + +CG
Sbjct: 89 AKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDS-KAISVSCGY 147
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--HGDKEAKLVPTCVAALVEPNFC 302
+HTA V E G L+T+G+ + G+LG + D ++ P V + E
Sbjct: 148 YHTAVVTE------------DGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKE-KVK 194
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQL--GNPQADGKLPNRVEGKLSKSFVEEIACGS 360
V CG T A+ SG VYT G+ GQL GN + P+RVE + + + +CG
Sbjct: 195 FVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVE-RFRDADCKHASCGE 253
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
AV+T K +YT+G G +G+LG GD N P V QV+ +ACG
Sbjct: 254 NFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACG 306
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 22/256 (8%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLI 122
+S P ++S + +ACG H + G+V+ WG S G+LG G D ++ P L+
Sbjct: 75 ASKPSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLL 134
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
D S V+CG YHT VT G+LYT+G+ Y L + + S P++V G E
Sbjct: 135 DFDSKAIS--VSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEK 192
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAA 241
+ + CG HT + +G ++TFG+G G LGHG+ S P VE + A+
Sbjct: 193 VKF--VVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHAS 250
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEP 299
CG TA + G L+T+GDG G+LG GD+ + P VA +
Sbjct: 251 CGENFTAVIT------------GKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKF 298
Query: 300 NFCRVACG--HSLTVA 313
VACG H + +A
Sbjct: 299 QVQWVACGGCHMMVIA 314
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 19/176 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ +GE T G LG LN +DSS + + V+ + CGG H +
Sbjct: 157 GNLYTFGE-TEYGKLG--LNNS------DLDSSDTPQKVTGIKEKVKFVVCGGGHTTAIA 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH---PKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ G V+++G + G+LGHG + +L P ++ + + + +CGE T +T G L
Sbjct: 208 ESGAVYTFGNGASGQLGHG--NSLLESPTPHRVERFRDADCKHASCGENFTAVITGKGHL 265
Query: 150 YTWGDGTYNFGLLGHGNE--VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
YT+GDG + G LG G+E + + P +V V ++CG H V+ S Q
Sbjct: 266 YTFGDGRH--GKLGLGDESFTNQFRPFKV-ARFNKFQVQWVACGGCHMMVIASPRQ 318
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 188/410 (45%), Gaps = 39/410 (9%)
Query: 13 LSSAVSSSSQGSGHDDGDALGD-VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKAL 70
LSS ++S G + G + D VF WG + + D L P+ L
Sbjct: 108 LSSIAAASCNDGGTNGGPSFADEVFCWGSNSSQQLTDA----------TPEDKLLYPRNL 157
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI 130
+V V +I G V G V + G+ S GRLG+G + P LI+ + +
Sbjct: 158 --SVYGKVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRK 215
Query: 131 ELVACG-EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
L + G + H+ A+ +G ++TWGDG Y G LGHG+ + PK + + V +
Sbjct: 216 ILTSKGSDGHSMAIGKNGQIWTWGDGDY--GKLGHGDSTTQKSPKLIEALASRVIVDA-D 272
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG H+A V AG L+ +G+G +G LG GD S+P +V ++ + CG HT
Sbjct: 273 CGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGFNHTVV 330
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ + ++++G + G+LGHGD + P + AL ++A G
Sbjct: 331 L-----------STDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQ 379
Query: 310 LTVALTTSGHVYTMGSPVYGQ-LGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVL 366
++ A+T G +Y G +G LGN +D LP V G LS V +IA G HV L
Sbjct: 380 ISAAVTREGALYVWG---FGPCLGNGSSDETFMLPKVVRG-LSGRVVIDIAIGENHVVAL 435
Query: 367 TSKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFT 415
T V+TWG NG+ G G SP +V+ L ++ + GT T
Sbjct: 436 TKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 162/328 (49%), Gaps = 27/328 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
EVF WG S +L D +L+P+ + + + G+Y T AV +G + G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK--VMSITAGQYCTFAVLSNGTVMANGK 187
Query: 155 GTYNFGLLGHGNEVSHWVPKRVN--GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+Y G LG+G S P + P+ I S S G H+ + GQ++T+GDG +
Sbjct: 188 GSY--GRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDY 243
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHGD + P+ +E+L V A CG H+AAV C +G L+ WG
Sbjct: 244 GKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAV------------CDAGHLYMWG 291
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQL 331
+GD GRLG GD + VP V + E + +V CG + TV L+T G V++ G+ G+L
Sbjct: 292 EGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAENGKL 349
Query: 332 GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
G+ + + ++ L + +IA G+ A +T + +Y WG G LG+G +D+
Sbjct: 350 GHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNGSSDET 407
Query: 392 -NSPSLVEALKDKQVKSIACGTNFTAAI 418
P +V L + V IA G N A+
Sbjct: 408 FMLPKVVRGLSGRVVIDIAIGENHVVAL 435
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 145/286 (50%), Gaps = 24/286 (8%)
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H+ + K G++++WG+ G+LGHG + PKLI+AL++ I CG H+ AV +
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ-LF 205
G LY WG+G Y G LG G+ + VP +V E S + CG HT V+++ G+ ++
Sbjct: 285 GHLYMWGEGDY--GRLGLGDALQRSVPVQVPDIRE---ASQVVCGFNHTVVLSTDGRTVW 339
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+FG G LGHGD P+ +++L+GL + A G +AAV
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR------------E 387
Query: 266 GKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G L+ WG G LG+G E ++P V L +A G + VALT G V+T G
Sbjct: 388 GALYVWGFGPC--LGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWG 445
Query: 325 SPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+ GQ G+ A P V+G L + ++++ G+ H V ++
Sbjct: 446 NNQNGQCGTGSGMATYTSPQMVQG-LHGAGIQQVTAGTTHTFVWSA 490
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
++F WG +L E KL+ P ++ V + G T A+ ++G V G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLLYPRNLS--VYGKVMSITAGQYCTFAVLSNGTVMANGK 187
Query: 326 PVYGQLGN-PQADGKLPNRVE--GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
YG+LGN A P +E + K + + G H + +++TWG G G+
Sbjct: 188 GSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDYGK 245
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
LGHGD+ + SP L+EAL + + CG +AA+C L+ W G
Sbjct: 246 LGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEG 293
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 152/312 (48%), Gaps = 20/312 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PKAL+ V A G H + K G+V+S G G+LGH D P+L+ L
Sbjct: 25 PKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGH--DQPRKRPQLVSGLD 82
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHV 185
+I VACGE H+ A++ G++++WG N+G LGH VPK + L V
Sbjct: 83 AYSIINVACGEMHSLALSRWGEVFSWGSD--NYGQLGHQLGGTLQIVPKLIKS-LAKYQV 139
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV-SIPREVESLKGLRTVRAACGV 244
I+ G H+ +T+AG++F +G FG LG G S P V SL G+ ACG
Sbjct: 140 VQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGA 199
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
HT AV SG +F WG G+LG D +K PT + L +
Sbjct: 200 NHTFAV------------SKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFI 247
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-V 363
+CG + LT G V++ G+ +YGQLG+ ++ R +L S + +I+CG H +
Sbjct: 248 SCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSL 307
Query: 364 AVLTSKTEVYTW 375
A + S+ VY++
Sbjct: 308 AFVPSRGRVYSY 319
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 156/328 (47%), Gaps = 23/328 (7%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F WG G LG G + V PK +D ++ A G HT +T G +Y+ G
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LGH P+ V+G L+ + +++CG H+ ++ G++F++G +G
Sbjct: 61 NDY--GQLGHDQPRKR--PQLVSG-LDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQ 115
Query: 215 LGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGH ++ I P+ ++SL + V+ A G H+ A+ ++G++F WG
Sbjct: 116 LGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT------------NAGEIFVWGA 163
Query: 274 GDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
D G+LG G + PT V +L F +ACG + T A++ SG V+ G + GQLG
Sbjct: 164 NDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N K P ++ L S V I+CG LT V++ G G G+LGHG T +
Sbjct: 224 LNDTVSKKFPTQLR-TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNE 282
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAIC 419
P V L + I+CG + A
Sbjct: 283 ILPRQVLELMGSTITQISCGRQHSLAFV 310
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 21/276 (7%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ WG + LG E + PK ++ E V + G HT +T G++++ G
Sbjct: 1 MFGWGSTIHGELGLGGIEEEHVFTPKALDW-FEAKSVMKAALGANHTLFLTKDGKVYSCG 59
Query: 209 DGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
+G LGH RK P+ V L + ACG H+ A+ G+
Sbjct: 60 SNDYGQLGHDQPRKR---PQLVSGLDAYSIINVACGEMHSLAL------------SRWGE 104
Query: 268 LFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+F+WG + G+LGH ++VP + +L + ++A G +VALT +G ++ G+
Sbjct: 105 VFSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGAN 164
Query: 327 VYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+GQLG P V LS IACG+ H ++ V+ WGK NG+LG
Sbjct: 165 DFGQLGLGTITPYESTPTTV-CSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLG 223
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
DT + P+ + L++ +V+ I+CG F+ + L
Sbjct: 224 LNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTL 259
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 33 GDVFIWGE---GTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
G+VF WG G LGG L V PK ++S V IA G RH+
Sbjct: 103 GEVFSWGSDNYGQLGHQLGGTLQIV------------PKLIKSLAKYQVVQIAAGQRHSV 150
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ GE+F WG G+LG G + P + +LS + L+ACG HT AV+ SG
Sbjct: 151 ALTNAGEIFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGA 210
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ WG G LG + VS P ++ L V ISCG + +T G +F+ G
Sbjct: 211 VFGWGKNIN--GQLGLNDTVSKKFPTQLRT-LRNSRVRFISCGDEFSTFLTLDGGVFSCG 267
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
G +G LGHG + +PR+V L G + +CG H+ A V
Sbjct: 268 AGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQHSLAFV 310
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 178/369 (48%), Gaps = 31/369 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
+F WG +G LG G G++ D L PK ++ ++CG +H V
Sbjct: 1 MFCWGAAR-NGELGLG--------GIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLA 51
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+G V++ G G+LG D P +I AL +I+ V+CG+YH V +++WG
Sbjct: 52 EGTVYTCGSNDYGQLGQ--DKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109
Query: 154 DGTYNFGLLGHGNEV--SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
+ G LGH E ++ R+ L + + ++CG H+ +++ G++F++G+ +
Sbjct: 110 YD--DCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNS 167
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG G K+ P+E+ SL G+ + G G+ S SG +F +
Sbjct: 168 HGQLGIGSTKNQPKPQELTSLTGIPFCQIVAG------------GSHSFVLSKSGAVFGF 215
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG GD + PT V +L ++CG T LT G V T G+ YGQL
Sbjct: 216 GRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQL 275
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
G N LP +V +L V ++ACG H +A + S +Y++G G NG+LG T
Sbjct: 276 GHNSNNHEALPRKV-FELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTT 334
Query: 390 DRNSPSLVE 398
+ N+P V+
Sbjct: 335 NCNTPITVD 343
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 154/328 (46%), Gaps = 26/328 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F WG G LG G ++ DV L PK + + V+CG HT V G +YT G
Sbjct: 1 MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y G LG + H P + L+ + +SCG +H VV Q+F++G G
Sbjct: 61 NDY--GQLGQ--DKGHKRPTVITA-LDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQ 115
Query: 215 LGH----GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LGH G S PR V+ L L+ V+ ACG H+ A+ + G++F+
Sbjct: 116 LGHTLEAGGNNSRR-PRMVKELSSLQIVQVACGGKHSLAL------------SNDGRIFS 162
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG+ G+LG G + + P + +L FC++ G S + L+ SG V+ G +GQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG D K P V+ L V I+CG H AVLT V T+G G+ G+LGH +
Sbjct: 223 LGLGDTGDRKYPTHVKS-LRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P V L +V +ACG T A
Sbjct: 282 HEALPRKVFELMGLEVTQLACGRMHTMA 309
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 23/242 (9%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ +SCG HT V + G ++T G +G LG K P + +L + +CG
Sbjct: 36 MREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGD 93
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-----GDKEAKLVPTCVAALVEP 299
+H V + ++F+WG D G+LGH G+ + P V L
Sbjct: 94 YHNLVVND------------KYQVFSWGYDDCGQLGHTLEAGGNNSRR--PRMVKELSSL 139
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIAC 358
+VACG ++AL+ G +++ G+ +GQLG + P + F + +A
Sbjct: 140 QIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAG 199
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GS H VL+ V+ +G+ G+LG GDT DR P+ V++L+ +V I+CG TA +
Sbjct: 200 GS-HSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258
Query: 419 CL 420
L
Sbjct: 259 TL 260
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 186/405 (45%), Gaps = 31/405 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDS-SLPKALESAVVLDVQNIACGGRHAALVNK 93
VF WG T DG LG S G + S S P+ + + ++ I+CG RH ++ +
Sbjct: 3 VFSWG-CTQDGQLGI------SGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLR 55
Query: 94 QGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V G G+LG S++ H + A + I V+CG HT AVT G + W
Sbjct: 56 DGTVMMCGANDRGQLGQDRPGSELAH---VPATETLVITQVSCGNDHTLAVTDRGQVLGW 112
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G L G+ P+ + L V+ ++CG H+ +T G++F +GD +F
Sbjct: 113 GRNDRGQCGLSTGDSEDKRKPRFLKS-LSSCQVAQVACGSMHSMALTRDGRIFAWGDNSF 171
Query: 213 GVLGHGDRKSVSI---PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG G P+++ SL G+ R ACG WH+ A+ SG +F
Sbjct: 172 GQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL------------SVSGAVF 219
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG G E ++ PT + L +ACG + T LT SG ++ G G
Sbjct: 220 GWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEG 279
Query: 330 QLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EVYTWGKGANGRLGHGD 387
QLG+ ++ P V+G L S + ++ACG H VL +T ++ G+G+ G+LG +
Sbjct: 280 QLGHGSHSNEVNPRSVQGFLG-SEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDN 338
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
++ S V + + C + + +G DQS C
Sbjct: 339 DSSKSCASPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFC 383
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 183/436 (41%), Gaps = 63/436 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG+ + G LG G G + P+ L S + ++ +ACGG H+ ++
Sbjct: 161 GRIFAWGDNSF-GQLGIGAP------GRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALS 213
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ + G+LG G D + P + L ++ +ACG+ +T +T SG L+ +
Sbjct: 214 VSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLF 273
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT-SAGQLFTFGDGT 211
G G+ G LGHG+ + P+ V G L G ++ ++CG HT V+ G+ F+ G G+
Sbjct: 274 GQGSE--GQLGHGSHSNEVNPRSVQGFL-GSEITQVACGRQHTLVLEGRTGRFFSLGQGS 330
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG + S S V G W + E N S G +F
Sbjct: 331 KGQLGLDNDSSKSCASPVP------------GPWEAPSSTE-GCSNGEESRSIIGSIFAG 377
Query: 272 GDGDKGRLGHGD--------KEA----------------------KLVPTCVAALVEPNF 301
GD + G+ +EA L P+ +E
Sbjct: 378 GDQSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMAL 437
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIA 357
AC ++ + SG ++ G GQLG+ G N V + K F + ++A
Sbjct: 438 SSPACLNASFLVGAGSGGLFLFGQGSEGQLGH----GSHSNEVNPRSVKDFLGNEITQVA 493
Query: 358 CGSYHVAVLTSKT-EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG H VL +T Y+ G+G+ G+LG + ++ SLV + + C +
Sbjct: 494 CGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLVPGPWEAPSSTEGCSNGEES 553
Query: 417 AICLHKWVSGVDQSMC 432
+ +G DQS C
Sbjct: 554 RSIIGSIFAGGDQSFC 569
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/317 (31%), Positives = 152/317 (47%), Gaps = 23/317 (7%)
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM 128
A + A + + CG H + G+V +G G+LG G +P+ + LS
Sbjct: 37 AFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGK 96
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
+ +A G H+ A+T SGDLY +GD LGH P++V PL ++ +
Sbjct: 97 GVVKMAAGLEHSLALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVP-PLGRAKITQL 155
Query: 189 SCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRKS---VSIPREVESLKGLRTVRAAC 242
+CG HTAV+TS+G+LF FG DG GV GH + S P+ V LKG V+ C
Sbjct: 156 ACGQDHTAVLTSSGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGC 215
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G+ HT A+ ++G ++ WG+ +G+LG GD + + P+ V + C
Sbjct: 216 GLQHTVALT------------AAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKC 263
Query: 303 -RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACG 359
VACG T+A+T VY GS +GQLG + +P R+ +L V+ G
Sbjct: 264 IHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIV-RLGGRRVKNCVGG 322
Query: 360 SYHVAVLTSKTEVYTWG 376
++H + T E Y G
Sbjct: 323 AWHTIIGTVTGEQYIMG 339
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 130/280 (46%), Gaps = 25/280 (8%)
Query: 151 TWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH-VSSISCGPWHTAVVTSAGQLFTFG 208
W G + G LG+G S ++P RV L ++ + CG HT +TS G + FG
Sbjct: 10 VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
+G G LG G+ S S P+ V L G V+ A G+ H+ A+ E SG L
Sbjct: 70 NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTE------------SGDL 117
Query: 269 FTWGDGDKGRLG--HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+ +GD G+LG H + P V L ++ACG T LT+SG ++ G+
Sbjct: 118 YAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNN 177
Query: 327 VYGQLG-------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
G LG P P V G L V +I CG H LT+ VY WG+
Sbjct: 178 RDGALGVAGHANEGPPIVASAPQLVTG-LKGKHVVQIGCGLQHTVALTAAGGVYCWGENG 236
Query: 380 NGRLGHGDTDDRNSPSLV-EALKDKQVKSIACGTNFTAAI 418
G+LG GDT +R +PSLV + L + +ACG T A+
Sbjct: 237 RGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAV 276
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 144/302 (47%), Gaps = 27/302 (8%)
Query: 97 VFSWGEESGGRLGHGV--DSDVLHPKLIDALS-NMNIELVACGEYHTCAVTLSGDLYTWG 153
V++ G S G+LG+G S L ++ L+ I V CG HT A+T GD+ +G
Sbjct: 10 VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+G G LG GN SH P+RV+ L G V ++ G H+ +T +G L+ FGD G
Sbjct: 70 NGVK--GQLGIGNTDSHSNPQRVH-LLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSG 126
Query: 214 VLGHGDRKSV--SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG G + P++V L + + ACG HTA + SSG+LF +
Sbjct: 127 QLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLT------------SSGELFMF 174
Query: 272 G---DGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G DG G GH ++ +V P V L + ++ CG TVALT +G VY G
Sbjct: 175 GNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGE 234
Query: 326 PVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
GQLG + P+ V LS +ACG H +T +VY +G +G+LG
Sbjct: 235 NGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294
Query: 385 HG 386
G
Sbjct: 295 LG 296
>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
Length = 1052
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 176/369 (47%), Gaps = 30/369 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+++ WG + + GG+ + S +P +SAV IACG RH +
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQ----ILTPSKMPWQPDSAV----NQIACGHRHTLFLTA 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V++ G +LGH + S P I L + I +ACG H+ A+T G + +WG
Sbjct: 54 SGKVYACGSNDYAQLGHELSSK--RPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWG 111
Query: 154 DGTYNFGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
D G LGH ++ +PK V L V I+CG H+ +T G+L+ +G +
Sbjct: 112 DN--ECGQLGHASDQDVVQLPKTVRA-LVSKTVVQIACGNNHSLALTCCGELYAWGSNIY 168
Query: 213 GVLG---HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG + + P + +L G+ ACG GN S S +F
Sbjct: 169 GQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACG------------GNHSFLISKSSAVF 216
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG + G+LG D+ + PT + L VACG +V LT G V+T G+ YG
Sbjct: 217 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYG 276
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDT 388
QLG+ ++ R+ +L S + ++ACG+ H +A++ ++ +Y +G G++G+LG +T
Sbjct: 277 QLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNT 336
Query: 389 DDRNSPSLV 397
N P +V
Sbjct: 337 KSLNLPQMV 345
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-----PKALESAVVLDVQNIACGGRH 87
G+++ WG + + GVK S L P L + + + V+ IACGG H
Sbjct: 158 GELYAWG------------SNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNH 205
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+ L++K VF WG + G+LG +++ +P + L + + VACG+ + +T G
Sbjct: 206 SFLISKSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEG 265
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFT 206
++T G G Y G LGHG + +P+ V L G +S ++CG HT A+V + G+++
Sbjct: 266 GVFTCGAGAY--GQLGHGFCGNEMLPRMV-MELMGSTISQVACGNRHTLAMVPARGRIYG 322
Query: 207 FGDGTFGVLGHGDRKSVSIPREV 229
FG G+ G LG + KS+++P+ V
Sbjct: 323 FGLGSSGQLGTRNTKSLNLPQMV 345
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 203 QLFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+L+ +G+ + G LG G + + + P ++ + ACG HT +
Sbjct: 2 ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLT--------- 52
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+SGK++ G D +LGH + P + LV+ ++ACG ++ALT G V
Sbjct: 53 ---ASGKVYACGSNDYAQLGHELSSKR--PLQIPELVDCVITQIACGSRHSMALTEWGQV 107
Query: 321 YTMGSPVYGQLGNP--QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+ G GQLG+ Q +LP V +SK+ V+ IACG+ H LT E+Y WG
Sbjct: 108 LSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQ-IACGNNHSLALTCCGELYAWGSN 166
Query: 379 ANGRLGHGDTDDR---NSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG + N+P L+ L V++IACG N + I
Sbjct: 167 IYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLI 209
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 171/359 (47%), Gaps = 32/359 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLID------ALSNMNI 130
+ IACGG H ++ G+V+S + + + +++L P+L+ AL I
Sbjct: 242 IAEIACGGNHILYLSSAGDVYSSEDHA---ISTTEPTNMLQTPQLVKELTLEKALHRRPI 298
Query: 131 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
+ACG H+ A+T +G++Y+WG G G LGHG VP+++ L + +SC
Sbjct: 299 IHIACGAKHSVALTSAGEVYSWGSG--EDGRLGHGEMRDRNVPRKIMALLRH-RIEYVSC 355
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES--LKGLRTVRAACGVWHTA 248
G HTAVV+ +FTFG G G LG GD K P+EV + + R ++ CG W+
Sbjct: 356 GGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCG-WNFT 414
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACG 307
+ + G++F+WG +G+ G G + +L P + L++ VACG
Sbjct: 415 IALSL-----------EGRVFSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVDVACG 463
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKL---SKSFVEEIACGSYHVA 364
++ ++ALT+ V + G YGQLG P ++ L + I CG++H
Sbjct: 464 YTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGAFHSI 523
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI-ACGTNFTAAICLHK 422
+ +Y WG + G G G T +R+ P + + + CG +T A+ + K
Sbjct: 524 ITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLCCGHKYTIALEVDK 582
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 144/305 (47%), Gaps = 28/305 (9%)
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
L K VF WG G + +L P+ +D L +I +ACG H ++ +GD+
Sbjct: 206 LDQKCARVFLWGRPPGW----SHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDV 261
Query: 150 YTWGD----GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
Y+ D T +L V ++ IH I+CG H+ +TSAG+++
Sbjct: 262 YSSEDHAISTTEPTNMLQTPQLVKELTLEKALHRRPIIH---IACGAKHSVALTSAGEVY 318
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
++G G G LGHG+ + ++PR++ +L R +CG HTA V S N
Sbjct: 319 SWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVV--------SDQNL-- 368
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAA--LVEPNFCRVACGHSLTVALTTSGHVYTM 323
+FT+G G GRLG GD + P V + +V CG + T+AL+ G V++
Sbjct: 369 --VFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSW 426
Query: 324 GSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G GQ LG D P +E L V+ +ACG H LTS+ EV +WG G G
Sbjct: 427 GKQSEGQCGLGFCDQDELSPCLIEKLLDNRIVD-VACGYTHSLALTSQHEVLSWGLGEYG 485
Query: 382 RLGHG 386
+LG G
Sbjct: 486 QLGRG 490
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 12/202 (5%)
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
S+ P++V+ L G ACG H + SS+ + S + + +
Sbjct: 227 SLLTPQKVDVLPGQSIAEIACGGNHILYL-------SSAGDVYSSEDHAISTTEPTNMLQ 279
Query: 282 GDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKL 340
+ K + T AL +ACG +VALT++G VY+ GS G+LG+ + D +
Sbjct: 280 TPQLVKEL-TLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNV 338
Query: 341 PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA- 399
P ++ L + +E ++CG H AV++ + V+T+G+G NGRLG GDT ++P V
Sbjct: 339 PRKIMALL-RHRIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTW 397
Query: 400 -LKDKQVKSIACGTNFTAAICL 420
+ +++ + CG NFT A+ L
Sbjct: 398 GFRKQRIIKVVCGWNFTIALSL 419
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 38/292 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G DG LG G R D ++P+ + + + ++ ++CGG H A+V+
Sbjct: 315 GEVYSWGSGE-DGRLGHGEMR---------DRNVPRKIMALLRHRIEYVSCGGSHTAVVS 364
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA--LSNMNIELVACGEYHTCAVTLSGDLY 150
Q VF++G GRLG G P+ + I V CG T A++L G ++
Sbjct: 365 DQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVF 424
Query: 151 TWG---DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+WG +G G +E+S P + L+ + ++CG H+ +TS ++ ++
Sbjct: 425 SWGKQSEGQCGLGFCDQ-DELS---PCLIEKLLDN-RIVDVACGYTHSLALTSQHEVLSW 479
Query: 208 GDGTFGVLGHG---DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
G G +G LG G SI + + + +G R CG +H+
Sbjct: 480 GLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGAFHSII------------TAG 527
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVP--TCVAALVEPNFCRVACGHSLTVAL 314
S L+ WG G G G + +P A ++ + + CGH T+AL
Sbjct: 528 SKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVV-LCCGHKYTIAL 578
>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
porcellus]
Length = 1080
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/346 (32%), Positives = 166/346 (47%), Gaps = 41/346 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+++ CG RH V G V++ G G+LGH + P+ + AL NI V+CGE
Sbjct: 36 VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKR-VNGPLE-GIHVS----SISC 190
HT A+ G +Y WG D GLLG +E VP++ + P++ I + + S
Sbjct: 94 AHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPRKSIFMPVDKNIRIKECKKTASR 151
Query: 191 GPW------------HTA----VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLK 233
W H A V SA ++F +G +G LG G D K + P+ ++SL
Sbjct: 152 KSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 211
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
G+ ++ A G H+ + SG +F WG G+LG D+ + VP +
Sbjct: 212 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPYLL 259
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
+L + CG T ALT G V+T G+ YGQLG+ ++ R +L S V
Sbjct: 260 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 319
Query: 354 EEIACGSYHV-AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
+IACG H A + S +Y++G G NG+LG G T +R SP V+
Sbjct: 320 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 365
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 164/338 (48%), Gaps = 22/338 (6%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + VL P+ D N + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---DGT 211
+ G LGH E S P++V L+ ++ ++SCG HT + GQ++ +G DG
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 212 FGVLGHGD-----RKSVSIPRE----VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
G+LG + RKS+ +P + ++ K + ++ + + + S
Sbjct: 116 LGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVA 175
Query: 263 CSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S+ ++F WG G+LG G D + + P + +L+ F +VA G + + LT SG ++
Sbjct: 176 VSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235
Query: 322 TMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G +GQLG N + D +P ++ S+ V I CG H A LT + V+T+G G
Sbjct: 236 GWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIV-YICCGEDHTAALTKEGGVFTFGAGGY 294
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LGH T +P V L V IACG T+A
Sbjct: 295 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAF 332
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF WG+ G LG G++ K +S P+ ++S + + +A GG H+ ++
Sbjct: 180 EVFCWGQNKY-GQLGLGID-------CKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTL 230
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F WG G+LG ++D P L+ +L + I + CGE HT A+T G ++T+G
Sbjct: 231 SGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 290
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTF 212
G Y G LGH N SH + R L G V+ I+CG HT A V S+G++++FG G
Sbjct: 291 AGGY--GQLGH-NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 347
Query: 213 GVLGHG---DRKS 222
G LG G +RKS
Sbjct: 348 GQLGTGSTSNRKS 360
>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
Length = 462
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 185/369 (50%), Gaps = 29/369 (7%)
Query: 58 FGVKMDSSLPKALESAVV-LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
F S P+ L++ +++ A G H+ L+ V+S G+ S G+LG D
Sbjct: 3 FSWAAGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQST 62
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P+ I AL++++++LV+CG+ H+ AV G ++ WG G+ +G E+S ++P ++
Sbjct: 63 ERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKI 121
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGL 235
L GI + +SCG +H+ ++ G +F++G + G LG G + +S +IP++V+SL+G+
Sbjct: 122 KA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGI 180
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTC 292
+ A G H+ A+ +G F WG G+L G+ KE P
Sbjct: 181 PLAQVAAGGTHSFAL------------SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHS 228
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKS 351
+ AL + ++CG+ T LT G V+T G GQL +P++ + P +EG +
Sbjct: 229 IGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR- 287
Query: 352 FVEEIACGSYH-VAVLTSKTEVYTWGKGAN--GRLGHGDTDDRNSPSL----VEALKDKQ 404
V +I C SYH +A + + +V + G+G + H + NS E L D +
Sbjct: 288 -VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIE 346
Query: 405 VKSIACGTN 413
VK I G +
Sbjct: 347 VKDIFAGAH 355
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 21/253 (8%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+R+ GI + + G H+ ++ S ++++ GD ++G LG +S P +++L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPT 291
L +CG H+ AV C GK+F WG G +G+LG G+ KE +PT
Sbjct: 72 NDLHVDLVSCGKEHSVAV------------CHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKL 348
+ AL +V+CGH ++AL+ GHV++ G GQLG N ++ +P +V+ L
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVK-SL 177
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQV 405
+ ++A G H L+ + WG +G+L G+ + P + ALK+ V
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSV 237
Query: 406 KSIACGTNFTAAI 418
I+CG TA +
Sbjct: 238 IYISCGYEHTAVL 250
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 47 LGGGLNRVG----SCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE 102
G G NR G S VK P ++ + L V I+CG H A++ ++G+VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 103 ESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
S G+L S P+LI+ + + + C YHT A V +G + + G G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRG 314
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
A + P R++ S + + A G +H +L S VY+ G + G+LG P
Sbjct: 7 AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66
Query: 396 LVEALKDKQVKSIACGTNFTAAICLHK 422
++AL D V ++CG + A+C HK
Sbjct: 67 PIQALNDLHVDLVSCGKEHSVAVC-HK 92
>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
Length = 1003
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 178/350 (50%), Gaps = 28/350 (8%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+++ A G H+ L+ V+S G+ S G+LG D P+ I AL++++++LV+C
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ H+ AV G ++ WG G+ +G E+S ++P ++ L GI + +SCG +H+
Sbjct: 82 GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHS 139
Query: 196 AVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
++ G +F++G + G LG G + +S +IP++V+SL+G+ + A G H+ A+
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---- 195
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+G F WG G+L G+ KE P + AL + ++CG+ T
Sbjct: 196 --------SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSK 369
LT G V+T G GQL +P++ + P +EG + V +I C SYH +A + +
Sbjct: 248 AVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTT 305
Query: 370 TEVYTWGKGAN--GRLGHGDTDDRNSPSL----VEALKDKQVKSIACGTN 413
+V + G+G + H + NS E L D +VK I G +
Sbjct: 306 GQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAH 355
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 21/253 (8%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+R+ GI + + G H+ ++ S ++++ GD ++G LG +S P +++L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPT 291
L +CG H+ AV C GK+F WG G +G+LG G+ KE +PT
Sbjct: 72 NDLHVDLVSCGKEHSVAV------------CHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKL 348
+ AL +V+CGH ++AL+ GHV++ G GQLG N ++ +P +V+ L
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKS-L 177
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQV 405
+ ++A G H L+ + WG +G+L G+ + P + ALK+ V
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSV 237
Query: 406 KSIACGTNFTAAI 418
I+CG TA +
Sbjct: 238 IYISCGYEHTAVL 250
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 47 LGGGLNRVGSCF----GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE 102
G G NR G VK P ++ + L V I+CG H A++ ++G+VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 103 ESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
S G+L S P+LI+ + + + C YHT A V +G + + G G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRG 314
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
A + P R++ S + + A G +H +L S VY+ G + G+LG P
Sbjct: 7 AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66
Query: 396 LVEALKDKQVKSIACGTNFTAAICLHK 422
++AL D V ++CG + A+C HK
Sbjct: 67 PIQALNDLHVDLVSCGKEHSVAVC-HK 92
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 180/368 (48%), Gaps = 30/368 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
++ WG+ + G LG G G++ + L P +E VQ IACG RH +
Sbjct: 3 LYCWGDAS-HGQLGLG--------GIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTA 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V++ G +LGH + + P I L + +ACG H+ A+T G + +WG
Sbjct: 54 NGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
D + G +GH + ++ L V I+CG H+ +TS G+L+++G +G
Sbjct: 112 DN--DCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYG 169
Query: 214 VLGHGDRKSV---SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LG K + + P + ++ G+ ACG GN S S +F
Sbjct: 170 QLGVQSPKDLPHSNAPLRLTTILGIPLATIACG------------GNHSFLISKSSAVFG 217
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG D++ + P+ + ++ V CG +V LT G V+T G+ YGQ
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ ++ ++ R+ +L S + ++ACG+ H +A++ S VY++G GA+G+LG +T
Sbjct: 278 LGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTI 337
Query: 390 DRNSPSLV 397
+ P +V
Sbjct: 338 SQTLPKVV 345
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 140/276 (50%), Gaps = 23/276 (8%)
Query: 149 LYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
LY WGD ++ GL G NE +P ++ + V I+CG HT +T+ GQ++
Sbjct: 3 LYCWGDASHGQLGLGGIENE-QILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYAC 60
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+ LGH P + L+ ++ ACG H+ A+ E G+
Sbjct: 61 GNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTE------------WGQ 106
Query: 268 LFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+ +WGD D G++GH D + +P + LV ++ACG++ ++ALT+ G +Y+ GS
Sbjct: 107 ILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSN 166
Query: 327 VYGQLGNPQADGKLPN-RVEGKLSKSF---VEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+YGQLG Q+ LP+ +L+ + IACG H +++ + V+ WGK G+
Sbjct: 167 IYGQLG-VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ 225
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG D +R PS +++++ V+ + CG ++ +
Sbjct: 226 LGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 31/333 (9%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++ WG+ S G+LG G + +L P I+ + ++ +ACG HT +T +G +Y G+
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
++ ++ H +P + P L+ V I+CG H+ +T GQ+ ++GD
Sbjct: 63 NDHH--------QLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114
Query: 212 FGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +GH D + +P+ + L V+ ACG H+ A+ S G+L++
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT------------SCGELYS 162
Query: 271 WGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WG G+LG D P + ++ +ACG + + ++ S V+ G
Sbjct: 163 WGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG N + + P++++ + V + CG + LT++ V+T G G G+LGHG
Sbjct: 223 CGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG 281
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+++ P +V L + +ACG T A+
Sbjct: 282 ASNNEMIPRMVIELMGSTITQVACGNRHTLALV 314
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 204 LFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ +GD + G LG G + + + +P ++E + ACG HT +
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLT---------- 52
Query: 262 NCSSGKLFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
++G+++ G+ D +LGH K +P A +V ++ACG ++ALT G
Sbjct: 53 --ANGQVYACGNNDHHQLGHELPTKRPLPIPELQAYVV----IQIACGSRHSMALTEWGQ 106
Query: 320 VYTMGSPVYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+ + G GQ+G+ + +LP + +S++ V+ IACG+ H LTS E+Y+WG
Sbjct: 107 ILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQ-IACGNNHSLALTSCGELYSWGS 165
Query: 378 GANGRLG---HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
G+LG D N+P + + + +IACG N + I V G ++ C
Sbjct: 166 NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTC 223
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 45 GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
V G G N G + + + P L+S L V+ + CG ++ + +G VF+ G
Sbjct: 214 AVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAG 273
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLL 162
+ G+LGHG ++ + P+++ L I VACG HT A+ SG +Y++G G G L
Sbjct: 274 NYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS--GQL 331
Query: 163 GHGNEVSHWVPKRVNGP 179
G N +S +PK V GP
Sbjct: 332 GTRNTISQTLPKVVIGP 348
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 172/367 (46%), Gaps = 28/367 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHA-ALVNK 93
V WG G DG LG G D P+A+ S + ++ CG ++ A+
Sbjct: 31 VLSWGRGE-DGQLG---------HGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGG 80
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+V+SWG GRLG G DV P + AL+ + VACG+ HT T G L+ +G
Sbjct: 81 DKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFG 140
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G G G+ P+ V L+G V +++CG H+ VTS G+++ +G G +G
Sbjct: 141 RN--QNGQCGLGSIQDCLEPQLVTA-LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYG 197
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G G+ + +P + L+G++ + CG H+ AV E G ++TWG
Sbjct: 198 NIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDE------------GGAMYTWGW 245
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G +L GD++ VP V A+ + VA G T+A + G ++ G +GQ G
Sbjct: 246 GAYAQLMQGDRKDHYVPKRVEAVQQ--VATVAGGWRHTMAADSQGRLFASGWNKFGQCGV 303
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ + + L+ V ++ G H +T + ++WG+ NG+LGH D NS
Sbjct: 304 GHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNS 363
Query: 394 PSLVEAL 400
P + AL
Sbjct: 364 PVELAAL 370
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 146/303 (48%), Gaps = 25/303 (8%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A GD ++ G GD R+G+ G D +P L + V ++ACG H +
Sbjct: 78 AGGDKQVYSWGWGD------FGRLGT--GDVKDVFIPCPLPALAGRRVASVACGDTHTLV 129
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+G++F++G G+ G G D L P+L+ AL + VACG H+ VT G++Y
Sbjct: 130 ATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVY 189
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG G Y G +G G +P G LEG+ V+ ++CG H+ V G ++T+G G
Sbjct: 190 CWGWGRY--GNIGDGESQDRHLPTLAKG-LEGVKVAQVNCGWRHSIAVDEGGAMYTWGWG 246
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ L GDRK +P+ VE+++ + TV A G HT A S G+LF
Sbjct: 247 AYAQLMQGDRKDHYVPKRVEAVQQVATV--AGGWRHTMAAD------------SQGRLFA 292
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+ G G E + V AL +V G T+A+T +G ++ G V GQ
Sbjct: 293 SGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQ 352
Query: 331 LGN 333
LG+
Sbjct: 353 LGH 355
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 137/290 (47%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAV--TLSGDL-YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+ACG H+ A+ T SG + +WG G G LGHG+ P+ V L +S+
Sbjct: 12 LACGSSHSLALISTPSGSMVLSWGRG--EDGQLGHGDAEDRQEPQAVFSLLH-RGATSVH 68
Query: 190 CGP-WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
CG + AV Q++++G G FG LG GD K V IP + +L G R ACG HT
Sbjct: 69 CGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL 128
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
+ G+LF +G G+ G G + L P V AL VACG
Sbjct: 129 VAT------------AEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGA 176
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
++ +T+ G VY G YG +G+ ++ D LP +G L V ++ CG H +
Sbjct: 177 EHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKG-LEGVKVAQVNCGWRHSIAVD 235
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+YTWG GA +L GD D P VEA+ +QV ++A G T A
Sbjct: 236 EGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAV--QQVATVAGGWRHTMA 283
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 118/259 (45%), Gaps = 18/259 (6%)
Query: 185 VSSISCGPWHTAVVTS---AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V ++CG H+ + S + ++G G G LGHGD + P+ V SL
Sbjct: 9 VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVH 68
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG ++ AV ++++WG GD GRLG GD + +P + AL
Sbjct: 69 CGAEYSMAVAG-----------GDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRV 117
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
VACG + T+ T G ++ G GQ G L ++ L V +ACG+
Sbjct: 118 ASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAE 177
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI--- 418
H +TS+ EVY WG G G +G G++ DR+ P+L + L+ +V + CG + A+
Sbjct: 178 HSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEG 237
Query: 419 -CLHKWVSGVDQSMCSGCR 436
++ W G + G R
Sbjct: 238 GAMYTWGWGAYAQLMQGDR 256
>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 197/415 (47%), Gaps = 58/415 (13%)
Query: 30 DALGDVFIWGEGTG-DGVLGGGLNRVGSCFGVKMDSSLPKALES---AVVLDVQNIACGG 85
D G+V IW G G DG LG R+ D LP+ L+ + + +ACGG
Sbjct: 15 DKGGEVEIWSWGAGTDGQLG--TTRL-------EDEHLPQLLDLPRFSSAGPISLLACGG 65
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
H + G+V +WG + G+LGHG L PK + L + + V+ G H+ V+
Sbjct: 66 AHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSD 125
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV-----TS 200
+G L+T GDG+ FG LGHG+ SH P +V+ + HV I+CG H+ V+ S
Sbjct: 126 TGCLFTCGDGS--FGQLGHGDCKSHCSPVKVS-YFDSKHVDQIACGMRHSLVLLKGTGLS 182
Query: 201 AGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
Q++ FG G G LG + +S+S+P+ L+G+ + H+AA+
Sbjct: 183 GDQVYGFGSGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAAL-------- 234
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
++G L+TWG G G P C+ + + F +VA G + + LT G
Sbjct: 235 ----SANGHLYTWGR------GFGSTSDVHCPRCLPSSL--CFTQVALGWNHMLVLTGGG 282
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----------VEEIACGSYHVAVLTS 368
V+ +G +G LG+PQ ++ + E ++ V +IA G+ H A++T
Sbjct: 283 EVFMLGGNRHGVLGDPQKGSQVKHLSEESREENLEKVQGLDGLNVVQIAAGAEHSALVTG 342
Query: 369 KTEVY-TWGKGANGRLGHGDTDDRNSPSLVEALK----DKQVKSIACGTNFTAAI 418
V TWG G +G+LG G+T D+ SP V + + CG+ FT AI
Sbjct: 343 NILVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 397
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 180/368 (48%), Gaps = 30/368 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNK 93
++ WG+ + G LG G G++ + L P +E VQ IACG RH +
Sbjct: 3 LYCWGDAS-HGQLGLG--------GIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTA 53
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+V++ G +LGH + + P I L + +ACG H+ A+T G + +WG
Sbjct: 54 NGQVYACGNNDHHQLGHELPTK--RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
D + G +GH + ++ L V I+CG H+ +TS G+L+++G +G
Sbjct: 112 DN--DCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYG 169
Query: 214 VLGHGDRKSV---SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LG K + + P + ++ G+ ACG GN S S +F
Sbjct: 170 QLGVQSPKDLPHSNAPLRLTTILGIPLATIACG------------GNHSFLISKSSAVFG 217
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG D++ + P+ + ++ V CG +V LT G V+T G+ YGQ
Sbjct: 218 WGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQ 277
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ ++ ++ R+ +L S + ++ACG+ H +A++ S VY++G GA+G+LG +T
Sbjct: 278 LGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTI 337
Query: 390 DRNSPSLV 397
+ P +V
Sbjct: 338 SQTLPKVV 345
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 141/276 (51%), Gaps = 23/276 (8%)
Query: 149 LYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
LY WGD ++ GL G NE +P ++ + V I+CG HT +T+ GQ++
Sbjct: 3 LYCWGDASHGQLGLGGIENE-QILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYAC 60
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+ LGH +P + L+ ++ ACG H+ A+ E G+
Sbjct: 61 GNNDHHQLGHELPTKRPLP--IPELQAYVVIQIACGSRHSMALTE------------WGQ 106
Query: 268 LFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+ +WGD D G++GH D + +P + LV ++ACG++ ++ALT+ G +Y+ GS
Sbjct: 107 ILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSN 166
Query: 327 VYGQLGNPQADGKLPN-RVEGKLSKSF---VEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+YGQLG Q+ LP+ +L+ + IACG H +++ + V+ WGK G+
Sbjct: 167 IYGQLG-VQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ 225
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG D +R PS +++++ V+ + CG ++ +
Sbjct: 226 LGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFL 261
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 158/333 (47%), Gaps = 31/333 (9%)
Query: 97 VFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
++ WG+ S G+LG G + +L P I+ + ++ +ACG HT +T +G +Y G+
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
++ ++ H +P + P L+ V I+CG H+ +T GQ+ ++GD
Sbjct: 63 NDHH--------QLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114
Query: 212 FGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +GH D + +P+ + L V+ ACG H+ A+ S G+L++
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT------------SCGELYS 162
Query: 271 WGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
WG G+LG D P + ++ +ACG + + ++ S V+ G
Sbjct: 163 WGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG N + + P++++ + V + CG + LT++ V+T G G G+LGHG
Sbjct: 223 CGQLGLNDEQNRAYPSQLKSMRTLG-VRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG 281
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+++ P +V L + +ACG T A+
Sbjct: 282 VSNNEMIPRMVIELMGSTITQVACGNRHTLALV 314
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 204 LFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ +GD + G LG G + + + +P ++E + ACG HT +
Sbjct: 3 LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLT---------- 52
Query: 262 NCSSGKLFTWGDGDKGRLGHG--DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
++G+++ G+ D +LGH K +P A +V ++ACG ++ALT G
Sbjct: 53 --ANGQVYACGNNDHHQLGHELPTKRPLPIPELQAYVV----IQIACGSRHSMALTEWGQ 106
Query: 320 VYTMGSPVYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
+ + G GQ+G+ + +LP + +S++ V+ IACG+ H LTS E+Y+WG
Sbjct: 107 ILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQ-IACGNNHSLALTSCGELYSWGS 165
Query: 378 GANGRLGHGDTDD---RNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
G+LG D N+P + + + +IACG N + I V G ++ C
Sbjct: 166 NIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTC 223
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 45 GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
V G G N G + + + P L+S L V+ + CG ++ + +G VF+ G
Sbjct: 214 AVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAG 273
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLL 162
+ G+LGHGV ++ + P+++ L I VACG HT A+ SG +Y++G G G L
Sbjct: 274 NYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS--GQL 331
Query: 163 GHGNEVSHWVPKRVNGP 179
G N +S +PK V GP
Sbjct: 332 GTRNTISQTLPKVVIGP 348
>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
Length = 511
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 163/339 (48%), Gaps = 29/339 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V ++ HAA V + GEVF+ G+ S GHG + P+L++AL + + VA G
Sbjct: 165 VAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 195
T +T+ G +YT G T+ G LGHG+ V PK V LEG+ V I+ GP +
Sbjct: 225 LSFTVFLTMKGHVYTCGTNTH--GQLGHGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYA 281
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 253
VT G + +FG G+ LGHG++ + PR ++S K + VR + G H A+
Sbjct: 282 MAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALD-- 339
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SSG ++TWG G G LGHGD+ K P +++L +V T
Sbjct: 340 ----------SSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFV 389
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
L +G VY G +G LG P +D + + L ++ +I+ G YH + +K
Sbjct: 390 LVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKG 449
Query: 371 EVYTWGKGANGRLGHGD-------TDDRNSPSLVEALKD 402
+++ +G +LGH T+ SP++ E +D
Sbjct: 450 QIFGFGDNERAQLGHDTLRGCPVPTEIFASPTVAEMERD 488
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 157/322 (48%), Gaps = 26/322 (8%)
Query: 87 HAAL-VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
+AAL +N Q ++F E+ R+ + S V I S N++ + G YHT +
Sbjct: 71 YAALSLNAQKDLFDRCGENWKRVLRFLQS-VEQSSYISETSAGNMQ-ITTGRYHTLLIK- 127
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
D + G+ G+LGHG E + V R+N P HV+ +S H A V +G++
Sbjct: 128 --DSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLA-HVAQVSASHNHAAFVMQSGEV 184
Query: 205 FTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
FT GD + GHGD + + PR VE+LKG+ + A G+ T +
Sbjct: 185 FTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLT------------ 232
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGHSLTVALTTSGHVY 321
G ++T G G+LGHGD + P V L V P ++A G S +A+T G V+
Sbjct: 233 MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGP-VVQIAAGPSYAMAVTDDGTVH 291
Query: 322 TMGSPVYGQLGNPQADGKL-PNRVEGKLSKSF-VEEIACGSYHVAVLTSKTEVYTWGKGA 379
+ GS LG+ + +L P ++ K+ V I+ G HV L S VYTWGKG
Sbjct: 292 SFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGY 351
Query: 380 NGRLGHGDTDDRNSPSLVEALK 401
G LGHGD D+ +P ++ +LK
Sbjct: 352 CGALGHGDEIDKTTPEILSSLK 373
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 19/277 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ + + +A G + +G V++ G + G+LGHG D PK+++ L
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ + +A G + AVT G ++++G G+ NF LGHG + + P+ + + IH
Sbjct: 267 GVGPVVQIAAGPSYAMAVTDDGTVHSFGSGS-NF-CLGHGEQHNELRPRAIQSFRRKTIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V IS G H + S+G ++T+G G G LGHGD + P + SLK V+
Sbjct: 325 VVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK---LVPTCVAALVEPNF 301
T +V+ +G ++ +G G LG D+ A + P + +L
Sbjct: 385 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYI 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG 338
+++ G TVA+ G ++ G QLG+ G
Sbjct: 433 SQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRG 469
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 14/223 (6%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
I+ G +HT ++ + +++ G GVLGHG + + + L V +
Sbjct: 116 ITTGRYHTLLIKDS-SVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNH 174
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVAC 306
AA V SG++FT GD GHGD + P V AL +VA
Sbjct: 175 AAFV-----------MQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAA 223
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G S TV LT GHVYT G+ +GQLG+ D + P VE V +IA G +
Sbjct: 224 GLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMA 283
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+T V+++G G+N LGHG+ + P +++ + K + +
Sbjct: 284 VTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVV 326
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 67 PKALES--AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
P+A++S + V I+ G H ++ G V++WG+ G LGHG + D P+++ +
Sbjct: 312 PRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSS 371
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR--VNGPLEG 182
L + V + T + +G +Y G G FG LG + + R + L G
Sbjct: 372 LKSHLAVQVCARKRKTFVLVDTGSVY--GFGWMGFGSLGFPDRGASDKVMRPWILDSLRG 429
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
++S IS G +HT V + GQ+F FGD LGH + +P E+
Sbjct: 430 HYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ GS + G LG+ P+ + + V +++ H A + EV+T G
Sbjct: 131 VYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQSGEVFTCGDN 190
Query: 379 ANGRLGHGDT-DDRNSPSLVEALKDKQVKSIACGTNFTAAICL--HKWVSGVD 428
++ GHGDT P LVEALK K +A G +FT + + H + G +
Sbjct: 191 SSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTN 243
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 174/328 (53%), Gaps = 25/328 (7%)
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
++ + G ++ +G G+LG G V P + L + + +ACG HT A+T L
Sbjct: 44 VITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRHL 103
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+++G G G LG G+ + P+ + LE +SCG H+A +T++G L+ +G
Sbjct: 104 HSFGAG--GEGQLGVGDSKQYEAPRMIEE-LEEQDYLLLSCGTDHSAALTASGTLYMWGG 160
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G+ G LGHG+ V IPRE+ +R V +CG +HTA + E KL+
Sbjct: 161 GSEGQLGHGEDTEVQIPRELSMGVPVRMV--SCGYYHTALLTE------------DKKLY 206
Query: 270 TWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
T+G+G+ G+LG G+ V P V+ EP V+CG++ T A+T GHVYT G+
Sbjct: 207 TFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEP-VDSVSCGNAHTAAITEKGHVYTFGNGA 265
Query: 328 YGQLGN--PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
GQLG+ + +P RV +L + + ++CG H A++T+K +YT+G G +G+LG
Sbjct: 266 SGQLGHGPDHLETNIPKRV-ARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKLGQ 324
Query: 386 GDTDDRN--SPSLVEALKDKQVKSIACG 411
G+ N +PS V V+ ++CG
Sbjct: 325 GEESFSNVFTPSKVHRFNGFLVEEVSCG 352
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 157/329 (47%), Gaps = 23/329 (6%)
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+ +T +G LY +G ++G LG G+ S P V G L+ V I+CG HT
Sbjct: 40 FFDVVITENGRLYVFG--ANDWGQLGLGHRKSVNKPSSVKG-LKHAGVVKIACGRVHTIA 96
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T L +FG G G LG GD K PR +E L+ + +CG H+AA+
Sbjct: 97 LTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAALT------ 150
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+SG L+ WG G +G+LGHG+ +P ++ V V+CG+ T LT
Sbjct: 151 ------ASGTLYMWGGGSEGQLGHGEDTEVQIPRELSMGVPVRM--VSCGYYHTALLTED 202
Query: 318 GHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
+YT G G+LG +A G + V+ ++CG+ H A +T K VYT+G
Sbjct: 203 KKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEPVDSVSCGNAHTAAITEKGHVYTFG 262
Query: 377 KGANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI----CLHKWVSGVDQSM 431
GA+G+LGHG D + N P V L+ + K ++CG TA + CL+ + G +
Sbjct: 263 NGASGQLGHGPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYTFGDGRHGKL 322
Query: 432 CSGCRLPFNNFKRKRHNCYNCGLVFCHSC 460
G N F + + +N LV SC
Sbjct: 323 GQGEESFSNVFTPSKVHRFNGFLVEEVSC 351
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 153/295 (51%), Gaps = 27/295 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IACG H + K + S+G G+LG G P++I+ L + L++CG
Sbjct: 84 VVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGT 143
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A+T SG LY WG G+ G LGHG + +P+ ++ G+ V +SCG +HTA+
Sbjct: 144 DHSAALTASGTLYMWGGGSE--GQLGHGEDTEVQIPRELS---MGVPVRMVSCGYYHTAL 198
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRK--SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T +L+TFG+G G LG G+ V+ P+ V S +CG HTAA+ E
Sbjct: 199 LTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHV-SFFTEPVDSVSCGNAHTAAITE--- 254
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCR-VACGHSLTVA 313
G ++T+G+G G+LGHG D +P VA L E C+ V+CG T
Sbjct: 255 ---------KGHVYTFGNGASGQLGHGPDHLETNIPKRVARL-EWTRCKWVSCGDCHTAI 304
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
+T G +YT G +G+LG + ++ P++V + + VEE++CG H V
Sbjct: 305 VTAKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVH-RFNGFLVEEVSCGGCHTLV 358
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLS 349
TC + E N V +T +G +Y G+ +GQLG + P+ V+G L
Sbjct: 22 TCPLSFPELNCSPFPFLFFFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKG-LK 80
Query: 350 KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
+ V +IACG H LT ++++G G G+LG GD+ +P ++E L+++ ++
Sbjct: 81 HAGVVKIACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLS 140
Query: 410 CGTNFTAAI----CLHKWVSGVDQSMCSG 434
CGT+ +AA+ L+ W G + + G
Sbjct: 141 CGTDHSAALTASGTLYMWGGGSEGQLGHG 169
>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
Length = 926
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 178/350 (50%), Gaps = 28/350 (8%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+++ A G H+ L+ V+S G+ S G+LG D P+ I AL++++++LV+C
Sbjct: 22 IELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSC 81
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ H+ AV G ++ WG G+ +G E+S ++P ++ L GI + +SCG +H+
Sbjct: 82 GKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHS 139
Query: 196 AVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
++ G +F++G + G LG G + +S +IP++V+SL+G+ + A G H+ A+
Sbjct: 140 LALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL---- 195
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+G F WG G+L G+ KE P + AL + ++CG+ T
Sbjct: 196 --------SLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHT 247
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSK 369
LT G V+T G GQL +P++ + P +EG + V +I C SYH +A + +
Sbjct: 248 AVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTT 305
Query: 370 TEVYTWGKGAN--GRLGHGDTDDRNSPSL----VEALKDKQVKSIACGTN 413
+V + G+G + H + NS E L D +VK I G +
Sbjct: 306 GQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAH 355
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 21/253 (8%)
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+R+ GI + + G H+ ++ S ++++ GD ++G LG +S P +++L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPT 291
L +CG H+ AV C GK+F WG G +G+LG G+ KE +PT
Sbjct: 72 NDLHVDLVSCGKEHSVAV------------CHKGKVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKL 348
+ AL +V+CGH ++AL+ GHV++ G GQLG N ++ +P +V+ L
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQA-IPQKVKS-L 177
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQV 405
+ ++A G H L+ + WG +G+L G+ + P + ALK+ V
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSV 237
Query: 406 KSIACGTNFTAAI 418
I+CG TA +
Sbjct: 238 IYISCGYEHTAVL 250
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 47 LGGGLNRVGSCF----GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE 102
G G NR G VK P ++ + L V I+CG H A++ ++G+VF++G
Sbjct: 202 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 261
Query: 103 ESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
S G+L S P+LI+ + + + C YHT A V +G + + G G
Sbjct: 262 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRG 314
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
A + P R++ S + + A G +H +L S VY+ G + G+LG P
Sbjct: 7 AGSRKPRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPE 66
Query: 396 LVEALKDKQVKSIACGTNFTAAICLHK 422
++AL D V ++CG + A+C HK
Sbjct: 67 PIQALNDLHVDLVSCGKEHSVAVC-HK 92
>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
Length = 907
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 183/412 (44%), Gaps = 34/412 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V NI+ HAA V + GEVF+ G+ S GHG V + P I AL ++ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHT 195
T +T G +YT G T+ G LGHG+ + PK V EG+ V ++ G +T
Sbjct: 217 LSFTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYT 273
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEV 253
VT G +++FG T LGHGD+ PR ++S K + VR + G H A+ +
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G ++TWG G G LGHGD+ K P +++L +V T
Sbjct: 334 ------------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFV 381
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
LT G V+ G +G LG P +D + RV L +V +I+ G YH +T++
Sbjct: 382 LTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRG 441
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQS 430
V+ +G +LG P+ E + K ++ I A ++ V +
Sbjct: 442 IVFGFGDNERAQLGQEYIRGCLKPT--EIMFQKSMEEIV----IAAPSGRQRFPGTVIKK 495
Query: 431 MCSGCRLPFNNFKRKR----HNCYN--CGLVFCHSCSSKKSLKASMAPNPNK 476
C G P N K+ H+ Y+ G+ S K +K+ A ++
Sbjct: 496 RCCGWHQPLGNHKQYHPQFLHHLYSERTGIFKVMGSSKKAKVKSRRAAKSDR 547
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 136/285 (47%), Gaps = 24/285 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 191
VA G YHT V D + G+ G+LGHG + + RV P V +IS
Sbjct: 108 VATGRYHTLLV---HDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS-RVVNISAS 163
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAV 250
H A VT G++FT GD + GHG+ +++ P E+++LKG+ + A G+ T +
Sbjct: 164 HNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVIL 223
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGH 308
+ G+++T G G+LGHGD + P V + P +VA G
Sbjct: 224 T------------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAP-VVQVAAGA 270
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG-KLSKSFVEEIACGSYHVAVL 366
S T A+T G VY+ GS LG+ Q D P ++ K V ++ G H L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+ VYTWG+G G LGHGD +D+ SP L+ +LK QV C
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVCA 374
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 155/350 (44%), Gaps = 39/350 (11%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVD-------SDVLHPKLIDALSNMNIELVACGE 137
GR+ L+ V+S G G LGHG D S V P L ++ ++
Sbjct: 111 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVN------ISASH 164
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGL-LGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWH 194
H VT G+++T GD N L GHG EV + P + L+GI ++ G
Sbjct: 165 NHAAFVTELGEVFTCGD---NSSLCCGHG-EVGRTIFRPTEIKA-LKGISCKQVATGLSF 219
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR-TVRAACGVWHTAAVVEV 253
T ++T+ GQ++T G T G LGHGD + P+ VE +GL V+ A G +T AV +
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD- 278
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLT 311
G ++++G LGHGD+ +L P + + N RV+ G
Sbjct: 279 -----------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 327
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
VAL G+VYT G G LG+ + K + L ++ VLT +
Sbjct: 328 VALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGS 387
Query: 372 VYTWGKGANGRLG---HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+ +G G LG G +D P ++++L+D V I+ G T A+
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 156/358 (43%), Gaps = 38/358 (10%)
Query: 12 SLSSAVSSSSQGSGHDDGDALGDVFIWGEGT----GDGVLGGGLNRVGSCFGVKMDSSLP 67
SLS V+ S+ + LG+VF G+ + G G +G + R P
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFR-------------P 199
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
+++ + + +A G ++ G+V++ G + G+LGHG D PK+++
Sbjct: 200 TEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEG 259
Query: 128 MN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHV 185
+ + VA G +T AVT G +Y++G T NF LGHG++ P+ + IHV
Sbjct: 260 LAPVVQVAAGASYTFAVTDDGTVYSFGSCT-NF-CLGHGDQHDELRPRAIQSFKRRNIHV 317
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+S G H + + G ++T+G G G LGHGD + P + SLK V+
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKR 377
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNFC 302
T + + G +F +G G LG D+ + + P + +L +
Sbjct: 378 KTFVLTD------------EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVS 425
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
+++ G TVA+T G V+ G QLG G L E KS +EEI +
Sbjct: 426 QISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCL-KPTEIMFQKS-MEEIVIAA 481
>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
Length = 396
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 172/342 (50%), Gaps = 27/342 (7%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIELVA 134
++V+++ACGG+H L+++ G+V+SWG + GHGV D P+ I AL + + +A
Sbjct: 38 VEVKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIA 97
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
GE H+ A+T +++TWG G + G LGHG+ W P V G L+G + SI CG +
Sbjct: 98 AGEDHSVALTDRSEVFTWGRGLH--GQLGHGDVSDVWFPFLVKG-LQGKGIKSIGCGYEN 154
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRK-----SVSIPREVESLKGLRTVRAACGVWHTAA 249
T +T G++ FG G LG+GD +V +P +++SL ++A G
Sbjct: 155 TFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGK----- 209
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-----FCR- 303
N S +G+L++ G G+LG +E + + ++ F +
Sbjct: 210 -------NFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKY 262
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
V+CG S ++AL+ G VY+ GS + LG+ + ++ L ++ G YH
Sbjct: 263 VSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHS 322
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQV 405
A +++ +YTWG+ G+LG G D +S V+ L + +
Sbjct: 323 AAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVI 364
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 30/336 (8%)
Query: 97 VFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
V+S G +GGRLG + + + L ++ ++ +ACG H ++ +G +Y+WG
Sbjct: 6 VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWG-- 63
Query: 156 TYNFG-LLGHGNE-VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN GHG E +S W P+ + LE + V I+ G H+ +T ++FT+G G G
Sbjct: 64 -YNDSRQTGHGVEDLSDWEPRWIR-ALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHG 121
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHGD V P V+ L+G CG +T A+ +GK+ +G
Sbjct: 122 QLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAIT------------GTGKVLGFGS 169
Query: 274 GDKGRLGHGDKEAKL-----VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
G+LG+GD + + +P + +L + + G + ++ L+ +G +Y++G
Sbjct: 170 AASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAAN 229
Query: 329 GQLGNPQADGKLPNR-VEGKLSKS-----FVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
GQLG P + + N G + + FV+ ++CG H L+ VY+WG G N
Sbjct: 230 GQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWA 289
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LGHG T+D +P +V L+ S++ G +AA+
Sbjct: 290 LGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 147/328 (44%), Gaps = 39/328 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + + V IA G H+ + + EVF+WG G+LGHG SDV P L+ L
Sbjct: 82 PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQ 141
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-----LE 181
I+ + CG +T A+T +G + G G+ G LG+G +V + V P L
Sbjct: 142 GKGIKSIGCGYENTFAITGTGKVL--GFGSAASGKLGNG-DVDGGIGGNVYLPVQLKSLA 198
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRKSVSIP-----REVESLKG 234
+ + G + ++ GQL++ G G LG + +S+++P +EV S KG
Sbjct: 199 KFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEV-SHKG 257
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
+ +CG H+ A+ E G +++WG G LGHG E P VA
Sbjct: 258 VFVKYVSCGDSHSLALSE------------DGIVYSWGSGINWALGHGGTEDTFTPKMVA 305
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ------AD--GKLPNRV-- 344
L V+ G + A++ +G +YT G GQLG Q AD +LP RV
Sbjct: 306 MLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVIL 365
Query: 345 EGKL-SKSFVEEIACGSYHVAVLTSKTE 371
+G + S + CG H + E
Sbjct: 366 KGSVDSSEMAMRVGCGQCHTILQVCVVE 393
>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
member 6 [Xenopus laevis]
gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
Length = 1028
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 181/360 (50%), Gaps = 39/360 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACG 136
VQ ++ G +H+ + K G + S G+ G+LG G +S + + I +L I V+CG
Sbjct: 36 VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNNSRI---EQISSLEAQTIVDVSCG 92
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-HWVPKRVNGPLEGIHVSSISCGPWHT 195
H+ A+ G++Y+WGDG+ G LG G S ++ PKR+ G L + ISCG +H+
Sbjct: 93 TNHSVAMCDEGNIYSWGDGSE--GQLGTGKFSSKNFTPKRITGLLNR-KIIQISCGNFHS 149
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ G++F++G G LG G + + + P+ V+SLKG+ V+ G
Sbjct: 150 VALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAG----------- 198
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G+ + + SG +F WG + G+LG + K+ P V +L + ++CG T
Sbjct: 199 -GSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTA 257
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKT 370
L G VYT G YGQLG + +P ++E + S+ V ++ACG YH + +
Sbjct: 258 VLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIE-EYSRQ-VSQVACGRYHTLLYVFTCN 315
Query: 371 EVYTWGKGANGRLGHGDTDDR----------NSPSLVEA--LKDKQVKSIACGTNFTAAI 418
+ ++GKG+ + G+ ++ D+ + SLV A LKD VK I G N A+
Sbjct: 316 RIVSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNNVGFAV 375
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 144/322 (44%), Gaps = 26/322 (8%)
Query: 97 VFSWGEESGGRLG-HGVDSDVLHPKLIDALSNM-NIELVACGEYHTCAVTLSGDLYTWGD 154
++ WG+ G+L + +V+H K D +++ V+ GE H+ + G L + G
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 155 GTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
Y G G+ + + LE + +SCG H+ + G ++++GDG+ G
Sbjct: 61 NPYGQLGRKGNNSRIEQI------SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEG 114
Query: 214 VLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG G S + P+ + L + ++ +CG +H+ A+ E G++F+WG
Sbjct: 115 QLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAE------------DGRVFSWG 162
Query: 273 DGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G + + P V +L +V G S T AL+ SG V+ G GQL
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQL 222
Query: 332 G--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
G N G L V I+CG H AVL VYT+G G+LG +
Sbjct: 223 GFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGN 282
Query: 390 DRNSPSLVEALKDKQVKSIACG 411
+ P +E +QV +ACG
Sbjct: 283 QTSVPQKIEEY-SRQVSQVACG 303
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG+G+ +G LG G + PK + + + I+CG H+ +
Sbjct: 103 GNIYSWGDGS-EGQLGTG--------KFSSKNFTPKRITGLLNRKIIQISCGNFHSVALA 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH---PKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ G VFSWG+ G+LG G S +++ P+L+ +L + + V G T A+++SG +
Sbjct: 154 EDGRVFSWGQNKCGQLGLG--SQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTV 211
Query: 150 YTWGDGTYNFGLLGHGNEVSH--WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+ WG N G LG N+ + P V+ L + V+ ISCG HTAV+ G ++TF
Sbjct: 212 FAWGRN--NAGQLGFKNDAKKGTFKPYAVDS-LRDLGVAYISCGEEHTAVLNKDGIVYTF 268
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
GD T+G LG S+P+++E + + ACG +HT V
Sbjct: 269 GDDTYGQLGQQSGNQTSVPQKIEEYSR-QVSQVACGRYHTLLYV 311
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 28/293 (9%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ ++ SSL E+ ++DV +CG H+ + +G ++SWG+ S G+L
Sbjct: 64 GQLGRKGNNSRIEQISSL----EAQTIVDV---SCGTNHSVAMCDEGNIYSWGDGSEGQL 116
Query: 109 GHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G S PK I L N I ++CG +H+ A+ G +++WG G LG G++
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQN--KCGQLGLGSQ 174
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSI 225
+ + ++ L+GI + ++ G T ++ +G +F +G G LG + +K
Sbjct: 175 IINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
P V+SL+ L +CG HTA + + G ++T+GD G+LG
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNK------------DGIVYTFGDDTYGQLGQQSGN 282
Query: 286 AKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
VP + +VACG H+L T + + + G Q GN ++
Sbjct: 283 QTSVPQKIEEYSR-QVSQVACGRYHTLLYVFTCN-RIVSFGKGSQRQQGNDES 333
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVE--PNFCRVACGHSLTVALTTSGHVYTMGS 325
++ WGD G+L ++E ++V + + +V+ G ++ L G + + G
Sbjct: 1 MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
YGQLG + ++ L + +++CG+ H + + +Y+WG G+ G+LG
Sbjct: 61 NPYGQLGRKGNNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGT 118
Query: 386 GDTDDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
G +N +P + L ++++ I+CG + A+
Sbjct: 119 GKFSSKNFTPKRITGLLNRKIIQISCGNFHSVAL 152
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 166/350 (47%), Gaps = 44/350 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPK--------------------LIDALSNMNIELVAC 135
++FSWG + G+LG G++ ++P IDA S+ ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISC 108
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G +H+ +T+ GDL+ WG G + G LG G E S +VP +N E + I+ G H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T G +FT+G G FG LGH +PR V+ + A HTAA+ E
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITE--- 221
Query: 256 GNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPTCVAALVEPNFCRVACGH 308
SG+L+ WG +GD + VP+ V AL P V+CG
Sbjct: 222 ---------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGG 271
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T+ALT G ++ G+ +LG G L + +IACG YH LT
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTK 331
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ +V +WG G +G+LG+ ++ P+ +EAL DK++ IACG + +AAI
Sbjct: 332 EGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAI 381
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 192/412 (46%), Gaps = 45/412 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVG------SCFGVKMDSSLPKALESAVVLDVQN------I 81
+F WG G G LGGG+ + + ++ D S A ++ +D ++ I
Sbjct: 49 QLFSWGRGA-SGQLGGGIEEIRMYPSPVANLLLRSDQSFSLA-QTPGRIDAESSSFPIGI 106
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
+CG H+ L G+++ WG+ GGRLG G ++ V P L +I +A G H+
Sbjct: 107 SCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSV 165
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+T GD++TWG G FG LGH VP+ V+G + +S+I+ HTA +T +
Sbjct: 166 ALTHQGDVFTWGYG--GFGALGHKVYTRELVPRCVDGSWD-CKISAIATSGTHTAAITES 222
Query: 202 GQLFTFG-------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
G+L+ +G G G + +S+P +V++L + +CG + T A+ +
Sbjct: 223 GELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK-- 279
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G+L+ WG LG GD P V +L ++ACG ++AL
Sbjct: 280 ----------EGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLAL 329
Query: 315 TTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T G V + G +GQLGN + K+P +E K V IACG A +T E++
Sbjct: 330 TKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVF-IACGGSSSAAITDGGELW 388
Query: 374 TWGKGANGRLG-HGDTDDRNSPSLVEALKDKQV----KSIACGTNFTAAICL 420
WG + +LG G + + +P V L ++ K I+ + A+CL
Sbjct: 389 MWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHALCL 440
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD++IWG+G G R+G FG + +P ++ IA GG H+ +
Sbjct: 119 GDLWIWGKGDG--------GRLG--FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALT 168
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
QG+VF+WG G LGH V + L P+ +D + I +A HT A+T SG+LY W
Sbjct: 169 HQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMW 228
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
GDG G NE VP +V + V+S+SCG + T +T GQL+ +
Sbjct: 229 GREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNW 286
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G + LG GD P V SL +R + ACG +H+ A+ + GK
Sbjct: 287 GANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTK------------EGK 334
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ +WG G G+LG+ + +PT + AL + +ACG S + A+T G ++ G+
Sbjct: 335 VLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAK 394
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEE-----------IACGSYHVAVLTSKT 370
QLG P LP + +F+ E ++ G+ H L S++
Sbjct: 395 DFQLGVP----GLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHALCLVSRS 444
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 169/371 (45%), Gaps = 68/371 (18%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H+ + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 16 ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + S ++Y+WG G +FG LGHGN + P + L G+ + I+CG H VT
Sbjct: 76 VAYSQSRLEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGVMIKQIACGDSHCLAVT 132
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG G+ + +P+++++ +G+R A G HTAAV E
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 185
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT----CV----AALVEPN----------- 300
G L+ W DG + G D+ +L CV A+++P+
Sbjct: 186 -----DGDLYGW-DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYL 239
Query: 301 ------------------------------FCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
F +++ G T+ LT+ G +Y G +GQ
Sbjct: 240 WMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQ 299
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
+G D P +V + V +++CG H +T + V+ WG+G NG+LG G++
Sbjct: 300 VGVGNNLDQCSPVQVRFPDDQKVV-QVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESL 358
Query: 390 DRNSPSLVEAL 400
DRNSP+++EAL
Sbjct: 359 DRNSPNIIEAL 369
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 2/171 (1%)
Query: 250 VVEVMVGNSSSSNCSSGKLF-TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
V+ + G S S SG++ +WG G+ G+LGHGD E + PT ++AL E V CG
Sbjct: 13 VLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGA 72
Query: 309 SLTVALTTSG-HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
TVA + S VY+ G +G+LG+ + L +++IACG H +T
Sbjct: 73 DHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVT 132
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
EV +WG+ NG+LG G+T+D P ++A + ++K +A G TAA+
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAV 183
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 125/309 (40%), Gaps = 69/309 (22%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP-KALESAVVLDVQNIACGGRHAALVN 92
+V+ WG G R+G + + LP KAL ++ + IACG H V
Sbjct: 84 EVYSWGWGD--------FGRLGHGNSSDLFTPLPIKALHGVMI---KQIACGDSHCLAVT 132
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
GEV SWG G+LG G D L P+ I A + I++VA G HT AVT GDLY W
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW 192
Query: 153 GDGTYNFGLLGHGNE--VSHWV--PKRVNGPLEGIHVS---------------------- 186
+ FG+ + + ++ + V+G + H+S
Sbjct: 193 DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRL 252
Query: 187 -------------------SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
IS G HT +TS G+L+ +G FG +G G+ P
Sbjct: 253 GGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPV 312
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
+V + V+ +CG HT AV E +F WG G G+LG G+ +
Sbjct: 313 QVRFPDDQKVVQVSCGWRHTLAVTE------------RNNVFAWGRGTNGQLGIGESLDR 360
Query: 288 LVPTCVAAL 296
P + AL
Sbjct: 361 NSPNIIEAL 369
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 144/339 (42%), Gaps = 66/339 (19%)
Query: 130 IELVACGEYHTCAVTLSGDLY-TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
+ +++ G H+ A+ LSG++ +WG G G LGHG+ P +++ L+ + S+
Sbjct: 13 VLIISAGASHSVAL-LSGEVVCSWGRG--EDGQLGHGDAEDRSSPTQLSA-LDEHQIVSV 68
Query: 189 SCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+CG HT A S +++++G G FG LGHG+ + P +++L G+ + ACG H
Sbjct: 69 TCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHC 128
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
AV G++ +WG G+LG G+ E LVP + A VA G
Sbjct: 129 LAVT------------MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAG 176
Query: 308 HSLTVALTTSGHVYTMGSPVY------------------------GQLGNPQADGKL--- 340
T A+T G +Y ++ G + P L
Sbjct: 177 AEHTAAVTEDGDLYGWDGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSI 236
Query: 341 ---------PNRV------------EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
P R + + +F +I+ G H LTS ++Y WG
Sbjct: 237 IYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNK 296
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++G G+ D+ SP V D++V ++CG T A+
Sbjct: 297 FGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 335
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH- 362
++ G S +VAL + V + G GQLG+ A+ + L + + + CG+ H
Sbjct: 16 ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
VA S+ EVY+WG G GRLGHG++ D +P ++AL +K IACG + A+ +
Sbjct: 76 VAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTM 133
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
I+ G RH + G+++ WG G++G G + D P + + + V+CG H
Sbjct: 272 QISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRH 331
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG----PLEGIHVSSISCGP 192
T AVT +++ WG GT G LG G + P + G H+ S S P
Sbjct: 332 TLAVTERNNVFAWGRGTN--GQLGIGESLDRNSPNIIEALSVDGASGQHIESSSFDP 386
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 42 TGDGVL-GGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG L G G N+ G G +D P + V ++CG RH V ++ VF+
Sbjct: 284 TSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFA 343
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS 126
WG + G+LG G D P +I+ALS
Sbjct: 344 WGRGTNGQLGIGESLDRNSPNIIEALS 370
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 159/342 (46%), Gaps = 23/342 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA GG H G V+ WG GRLG G +D P + L + + +A G
Sbjct: 55 VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGG 113
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HTCA+T SG+++ WG Y G LG G+ + P V+G G V++I+ G WHT
Sbjct: 114 AHTCALTSSGEVWCWGSNFY--GQLGDGSYTTRSTPVAVSGLPSG--VTAIAAGGWHTCA 169
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
TS+G ++ +G G LG G S P V L T AA G HT A +
Sbjct: 170 RTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVTAIAA-GDAHTCARM------ 222
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
SSG+++ WG + G+LG G P V+ L +A G T ALT S
Sbjct: 223 ------SSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGL-PSGVTAIAAGGVHTCALTGS 275
Query: 318 GHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V G+ GQLGN G+ P V G S V IA G YH LT V+ WG
Sbjct: 276 GGVRCWGANYSGQLGNGLTFGRSTPGAVSGL--PSGVTAIAAGDYHTCALTGSGGVWCWG 333
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+LG G T R++P V L V++IA G T A+
Sbjct: 334 GNYSGQLGDGTTTARSTPVAVSGLPSG-VETIAAGDYHTCAL 374
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 166/362 (45%), Gaps = 26/362 (7%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G+ S P A+ S + V IA G H + G V+ WG G+LG G +
Sbjct: 292 GLTFGRSTPGAV-SGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARST 350
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + +E +A G+YHTCA+ SG + WG + G LG G + P V+G
Sbjct: 351 PVAVSGLPS-GVETIAAGDYHTCALMSSGGVRCWGH--NDRGQLGDGTTTARSTPVAVSG 407
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL-KGLRT 237
G V++I+ G HT TS+G ++ +GD + G LG G S P V L G+ T
Sbjct: 408 LPSG--VTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLASGVET 465
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ A G WHT A+ SG ++ WG + G+LG G + P V+ L
Sbjct: 466 IAA--GGWHTCALT------------GSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGL- 510
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI 356
+A G T ALT SG V+ G GQLG+ D P V G S V I
Sbjct: 511 PSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGL--PSGVTAI 568
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G H LT V+ WG G+LG G T +R++P V L V +IA G +T
Sbjct: 569 AAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSG-VTAIAAGLRYTC 627
Query: 417 AI 418
A+
Sbjct: 628 AL 629
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/360 (33%), Positives = 164/360 (45%), Gaps = 23/360 (6%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G S P A+ S + V IA G H G V+ WG+ S G+LG G +D
Sbjct: 394 GTTTARSTPVAV-SGLPSGVTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSST 452
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L++ +E +A G +HTCA+T SG ++ WG N G LG G+ + H P V+G
Sbjct: 453 PVAVSGLAS-GVETIAAGGWHTCALTGSGGVWCWGR--NNSGQLGDGSTIYHITPVAVSG 509
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
G V++I+ G HT +T +G ++ +G G LG G S P V L T
Sbjct: 510 LPSG--VTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSGVTA 567
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
AA + HT A+ SG ++ WG D G+LG G + P V+ L
Sbjct: 568 IAAGDI-HTCALT------------GSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGL-P 613
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
+A G T ALT SG V+ G + GQL + P V G S V IA
Sbjct: 614 SGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTSRSTPVAVSGL--PSGVTAIAA 671
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G ++ TS V WG +G+LG G T R++P V L V +IA G T A+
Sbjct: 672 GGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPSG-VTAIAAGGEHTCAL 730
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 172/387 (44%), Gaps = 36/387 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G R+G G DSS P A+ S + V IA GG H +
Sbjct: 72 GGVWCWG--------GNDFGRLGD--GSYTDSSTPVAV-SGLPSGVTAIAAGGAHTCALT 120
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
GEV+ WG G+LG G + P + L + + +A G +HTCA T SG ++ W
Sbjct: 121 SSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPS-GVTAIAAGGWHTCARTSSGGVWCW 179
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G G Y G LG G P V+G P E V++I+ G HT S+G+++ +G
Sbjct: 180 G-GNYR-GQLGDGTTTDRSTPVAVSGLPSE---VTAIAAGDAHTCARMSSGEVWCWGGNN 234
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LG G S P V L T AA GV HT A+ SG + W
Sbjct: 235 YGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGV-HTCALT------------GSGGVRCW 281
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG+G + P V+ L +A G T ALT SG V+ G GQL
Sbjct: 282 GANYSGQLGNGLTFGRSTPGAVSGL-PSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQL 340
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P V G S VE IA G YH L S V WG G+LG G T
Sbjct: 341 GDGTTTARSTPVAVSGL--PSGVETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTA 398
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
R++P V L V +IA G T A
Sbjct: 399 RSTPVAVSGLPSG-VTAIAAGRLHTCA 424
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 174/387 (44%), Gaps = 34/387 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G DSS P A+ S + V IA GG H +
Sbjct: 225 GEVWCWG-GNNYGQLG---------DGSYTDSSTPVAV-SGLPSGVTAIAAGGVHTCALT 273
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V WG G+LG+G+ P + L + + +A G+YHTCA+T SG ++ W
Sbjct: 274 GSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCW 332
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G Y+ G LG G + P V+G G+ +I+ G +HT + S+G + +G
Sbjct: 333 G-GNYS-GQLGDGTTTARSTPVAVSGLPSGVE--TIAAGDYHTCALMSSGGVRCWGHNDR 388
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G + S P V L T AA G HT A SSG ++ WG
Sbjct: 389 GQLGDGTTTARSTPVAVSGLPSGVTAIAA-GRLHTCA------------RTSSGGVWCWG 435
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
D G+LG G P V+ L +A G T ALT SG V+ G GQLG
Sbjct: 436 DNSDGQLGDGSFTDSSTPVAVSGLAS-GVETIAAGGWHTCALTGSGGVWCWGRNNSGQLG 494
Query: 333 NPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ + P V G S V IA G H LT V+ WG G+LG G T DR
Sbjct: 495 DGSTIYHITPVAVSGL--PSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDR 552
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
++P V L V +IA G T A+
Sbjct: 553 STPVAVSGLPSG-VTAIAAGDIHTCAL 578
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 165/364 (45%), Gaps = 36/364 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+ + DG LG G DSS P A+ S + V+ IA GG H +
Sbjct: 429 GGVWCWGDNS-DGQLG---------DGSFTDSSTPVAV-SGLASGVETIAAGGWHTCALT 477
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V+ WG + G+LG G + P + L + + +A G HTCA+T SG ++ W
Sbjct: 478 GSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVWCW 536
Query: 153 GDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G NF G LG G P V+G G V++I+ G HT +T +G ++ +G
Sbjct: 537 GG---NFAGQLGDGTTTDRSTPVAVSGLPSG--VTAIAAGDIHTCALTGSGGVWCWGGND 591
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
FG LG G + S P V L T AA G+ +T A+ SG ++ W
Sbjct: 592 FGQLGDGTTTNRSTPVAVSGLPSGVTAIAA-GLRYTCALT------------GSGGVWCW 638
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+L G ++ P V+ L +A G T A T+SG V G+ GQL
Sbjct: 639 GYNLSGQLDDG-TTSRSTPVAVSGL-PSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQL 696
Query: 332 GNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ + P V G S V IA G H L S V+ WG+ +G+LG G
Sbjct: 697 GDGTTTKRSTPVAVSGL--PSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLY 754
Query: 391 RNSP 394
R +P
Sbjct: 755 RTTP 758
>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Cricetulus griseus]
Length = 887
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 28/329 (8%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
DS P+ L L++ A G RH+ L+ V+S G+ S G+LG + + P+ I
Sbjct: 8 DSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPI 67
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
AL ++I+LV+CG+ H+ AV G ++ WG G+ +G E++ +P R+ L G
Sbjct: 68 QALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEIN-LMPMRIK-TLGG 125
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAA 241
I + +SCG +H+ ++ GQ+F++G + G LG G + S P++V SL+G+ + A
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVA 185
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVE 298
G H+ A+ +G + WG G+L + + + P + AL
Sbjct: 186 AGGSHSFAL------------SLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKN 233
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL-GNPQADGKLPNRVEGKLSKSFVEEIA 357
++CG+ T LT G V+T G GQL NP+ + P VEG K V +I
Sbjct: 234 LGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEG--IKGQVSKIE 291
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
CGSYH T Y + G LGHG
Sbjct: 292 CGSYH-------TIAYVYTTGQVVSLGHG 313
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 154/310 (49%), Gaps = 23/310 (7%)
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
+D P+ ++ + + A GE H+ + + +Y+ GD + G LG E + P
Sbjct: 7 ADSRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNS--LGQLGQKREQNTEQP 64
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESL 232
+ + L + + +SCG H+ V G++F +G G+ G LG G+ K +++ P +++L
Sbjct: 65 EPIQA-LGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMPMRIKTL 123
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPT 291
G++ ++ +CG +H+ A+ E G++F+WG +G+LG G ++ P
Sbjct: 124 GGIKIIQVSCGHYHSLALSE------------DGQVFSWGKNSQGQLGLGMQSSSQASPQ 171
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGK 347
V +L +VA G S + AL+ +G Y GS GQL N P+ ++
Sbjct: 172 KVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDA- 230
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
L V I+CG H AVLT +V+T+G ++G+L + R P LVE +K QV
Sbjct: 231 LKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEGIKG-QVSK 289
Query: 408 IACGTNFTAA 417
I CG+ T A
Sbjct: 290 IECGSYHTIA 299
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 138/270 (51%), Gaps = 22/270 (8%)
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHP 119
+ ++ P+ +++ LD+ ++CG H+ V +G VF+WG S G+LG G ++ L P
Sbjct: 58 EQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEINLMP 117
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNG 178
I L + I V+CG YH+ A++ G +++WG + G LG G + S P++V
Sbjct: 118 MRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQ--GQLGLGMQSSSQASPQKVTS 175
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL---GHGDRKSVSIPREVESLKGL 235
LEGI ++ ++ G H+ ++ G + +G + G L G +S P +++LK L
Sbjct: 176 -LEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDALKNL 234
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
+ +CG HTA + + G++FT+GD G+L + + + P V
Sbjct: 235 GVIYISCGYEHTAVLTK------------DGQVFTFGDNSSGQLQNNPRGKRRGPQLVEG 282
Query: 296 LVEPNFCRVACGHSLTVA-LTTSGHVYTMG 324
++ ++ CG T+A + T+G V ++G
Sbjct: 283 -IKGQVSKIECGSYHTIAYVYTTGQVVSLG 311
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 31/263 (11%)
Query: 170 HWV-----PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
HW P+R+NG +G+ + + G H+ ++ S ++++ GD + G LG ++
Sbjct: 4 HWAADSRQPRRLNGR-DGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE 62
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD- 283
P +++L L +CG H+ AV C G++F WG G +G+LG G+
Sbjct: 63 QPEPIQALGTLDIDLVSCGKEHSIAV------------CHKGRVFAWGAGSEGQLGIGEF 110
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-----NPQADG 338
KE L+P + L +V+CGH ++AL+ G V++ G GQLG + QA
Sbjct: 111 KEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASP 170
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPS 395
+ +EG + ++A G H L+ Y WG + G+L G T + P
Sbjct: 171 QKVTSLEGIP----LAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPH 226
Query: 396 LVEALKDKQVKSIACGTNFTAAI 418
++ALK+ V I+CG TA +
Sbjct: 227 SIDALKNLGVIYISCGYEHTAVL 249
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
AD + P R+ G+ ++ A G H +L S VY+ G + G+LG + P
Sbjct: 7 ADSRQPRRLNGRDGLELLQA-ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPE 65
Query: 396 LVEALKDKQVKSIACGTNFTAAICLHK 422
++AL + ++CG + A+C HK
Sbjct: 66 PIQALGTLDIDLVSCGKEHSIAVC-HK 91
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 18/315 (5%)
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPKRVNGPLEG 182
AL NI V+CG+ HT A+ G +Y WG T G LG G E VP+ + L
Sbjct: 29 ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTD--GQLGLPGTEECIRVPRNIKS-LSD 85
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAA 241
I + +SCG +H+ ++ ++F++G +G LG G + K + P+ ++SL G+ ++ A
Sbjct: 86 IQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIA 145
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G H+ + SG +F WG G+LG D+ + VP + +L
Sbjct: 146 AGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI 193
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+ CG T ALT G V+T G+ YGQLG+ ++ R +L S V ++ACG
Sbjct: 194 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ 253
Query: 362 HV-AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
H A + S +Y++G G NG+LG G T +R SP V+ + + C+
Sbjct: 254 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQDPSNIDGEQYYCV 313
Query: 421 HKWVSGVDQSMCSGC 435
+ SG DQS C
Sbjct: 314 KRIFSGGDQSFSHYC 328
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 71 ESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALS 126
E V LD QNI +CG H +N +G+V++WG ++ G+LG G + + P+ I +LS
Sbjct: 25 EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLS 84
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
++ I V+CG YH+ A++ ++++WG Y G LG G E ++ L GI
Sbjct: 85 DIQIVQVSCGYYHSLALSKGSEVFSWGQNKY--GQLGLGFEFKKQTSPQLIKSLLGIPFM 142
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
I+ G H+ V+T +G +F +G FG LG D +P ++SL+ + V CG H
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TAA+ + G +FT+G G G+LGH ++ P V L+ +VAC
Sbjct: 203 TAALTK------------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 250
Query: 307 GHSLTVALT-TSGHVYTMGSPVYGQLG 332
G T A +SG +Y+ G GQLG
Sbjct: 251 GRQHTSAFVPSSGRIYSFGLGGNGQLG 277
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG L C V P+ ++S + + ++CG H+ ++
Sbjct: 52 GQVYAWGLDT-DGQLG--LPGTEECIRV------PRNIKSLSDIQIVQVSCGYYHSLALS 102
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K EVFSWG+ G+LG G + P+LI +L + +A G H+ +TLSG ++
Sbjct: 103 KGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFG 162
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG FG LG +E +VP + L + I CG HTA +T G +FTFG G
Sbjct: 163 WGRN--KFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 219
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G LGH PR+V L G + ACG HT+A V SSG+++++
Sbjct: 220 YGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVP-----------SSGRIYSF 268
Query: 272 GDGDKGRLGHGDKEAKLVPTCV 293
G G G+LG G + P V
Sbjct: 269 GLGGNGQLGTGSTSNRKSPFTV 290
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-GDKE 285
+V +L V +CG HT A+ + G+++ WG G+LG G +E
Sbjct: 25 EQVVALDAQNIVAVSCGDAHTLALND------------KGQVYAWGLDTDGQLGLPGTEE 72
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL--PNR 343
VP + +L + +V+CG+ ++AL+ V++ G YGQLG K P
Sbjct: 73 CIRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQL 132
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
++ L F++ IA G H VLT ++ WG+ G+LG D +DR P+L+++L+ +
Sbjct: 133 IKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 191
Query: 404 QVKSIACGTNFTAAI 418
++ I CG + TAA+
Sbjct: 192 KIVYICCGEDHTAAL 206
>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
Length = 1016
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 170/342 (49%), Gaps = 28/342 (8%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G H+ L+ G V S G+ S G+LG P+ I AL +N+ LV+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AV G ++ WG + G LG G + + ++PK++ L GI + ++CG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIKT-LAGIKIIQVACGHYHSVALSE 145
Query: 201 AGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQ+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196
Query: 260 SSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG F WG G+L G+ + P + AL ++CG+ T LT
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 317 SGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G YGQLG +P A+ + P VE + V +I CGS H +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 375 WGKGAN--GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGT 412
+G+G R H + + LV A L D QVK I GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V+L S S H G VF WG +G LG G K +
Sbjct: 71 ALETLNVALVSCGKEHSLAVCHK-----GRVFAWG-AASEGQLGIG--------EFKETT 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+PK +++ + + +ACG H+ +++ G+VFSWG S G+LG G + P+ +
Sbjct: 117 FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G +H+ A++LSG + WG + L G+ V + P + G L+
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKT 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V SISCG HTAV+T G++FTFGD ++G LGH P+ VE ++GL + + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G HT A +
Sbjct: 295 GSDHTLAYI 303
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
P+ + + L+V ++CG H+ V +G VF+WG S G+LG G PK I L
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+ + I VACG YH+ A++ G +++WG ++ G LG G E S P+RV LEGI
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVS--IPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G + G L G+ V P + +LK L V +
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+GD G+LGH K P V +E
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGLV 289
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ CG T+A + T+G V + G
Sbjct: 290 SQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ S G + + GD + G LG P + +L+ L +CG H+ AV
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHS 309
C G++F WG +G+LG G+ KE +P + L +VACGH
Sbjct: 91 ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAV 365
+VAL+ G V++ G+ +GQLG + P++ + +S + ++A G +H
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195
Query: 366 LTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L+ + WG + G+L G+ R P + ALK V SI+CG TA +
Sbjct: 196 LSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ + L V +I+CG +H A++ + G+VF++G+ S G+LGH ++ P+L++ +
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286
Query: 127 NMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
+ + + CG HT A + +G + ++G G
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 25/338 (7%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H A+V G+++ +G G+LG G + V P + AL +L CG H
Sbjct: 43 HISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNH 102
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G++Y G + G LG G+ ++ + ++ G + +A VT
Sbjct: 103 TLVYTEKGNVYAAGGNSE--GQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVT 160
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQLF +GD + G +G D+ VS+P +V+ K + ++ +CG +H+A +
Sbjct: 161 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFIT-------- 210
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G+L+T+G+ + G+LG ++ K VP V ++E +VACG TV LT +
Sbjct: 211 ----GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTET 265
Query: 318 GHVYTMGSPVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G YGQLG+ K +P V+ L + + CG H AV+ ++T+
Sbjct: 266 G-VYTFGLGQYGQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIAENGLMFTF 323
Query: 376 GKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G G +G+LG G+ + N P+L V +ACG
Sbjct: 324 GDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 131/277 (47%), Gaps = 50/277 (18%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
ISCG HTAVVT G+L+ FG +G LG G + +V P V++LK +T A CG HT
Sbjct: 44 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103
Query: 248 AAVVE-----VMVGNS------------------------------------SSSNCSSG 266
E GNS S++ G
Sbjct: 104 LVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDG 163
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+LF WGD +G++G DK VP C + +P ++CG+ + +T G +YT G P
Sbjct: 164 QLFVWGDNSEGQIGLADKTCVSVP-CQVDVGKP-VSSISCGYYHSAFITGDGELYTFGEP 221
Query: 327 VYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG + ++P V G + K V ++ACG H VLT +T VYT+G G G+L
Sbjct: 222 ENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGEHTVVLT-ETGVYTFGLGQYGQL 278
Query: 384 GHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAIC 419
GHG + S P V+ L+ ++ ++ CG + TA I
Sbjct: 279 GHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIA 315
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 28/195 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGV--KMDSSLPKALESAVVLDVQNIACGGRHAAL 90
G +F+WG+ + +G +G +C V ++D P V +I+CG H+A
Sbjct: 163 GQLFVWGDNS-EGQIGLADK---TCVSVPCQVDVGKP----------VSSISCGYYHSAF 208
Query: 91 VNKQGEVFSWGEESGGRLG----HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
+ GE++++GE G+LG +S V P ++ + +N VACG HT +T +
Sbjct: 209 ITGDGELYTFGEPENGKLGLLPEQLKNSRVPQP-VLGIMEKVN--KVACGGEHTVVLTET 265
Query: 147 GDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G +YT+G G Y G LGHG + VPK V L + +++CG HTAV+ G +F
Sbjct: 266 G-VYTFGLGQY--GQLGHGTLLFKTSVPKSVK-HLRSHKIHNVTCGESHTAVIAENGLMF 321
Query: 206 TFGDGTFGVLGHGDR 220
TFGDG G LG G+
Sbjct: 322 TFGDGRHGKLGLGEE 336
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKL 121
+S+PK+++ + N+ CG H A++ + G +F++G+ G+LG G + ++ P L
Sbjct: 287 TSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPAL 346
Query: 122 IDALSNMNIELVACGEYH 139
+ + LVACG H
Sbjct: 347 CSNFLSFTVLLVACGGCH 364
>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
Length = 1016
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 170/342 (49%), Gaps = 28/342 (8%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G H+ L+ G V S G+ S G+LG P+ I AL +N+ LV+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AV G ++ WG + G LG G + + ++PK++ L GI + ++CG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIKT-LAGIKIIQVACGHYHSVALSE 145
Query: 201 AGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQ+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196
Query: 260 SSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG F WG G+L G+ + P + AL ++CG+ T LT
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 317 SGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G YGQLG +P A+ + P VE + V +I CGS H +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 375 WGKGAN--GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGT 412
+G+G R H + + LV A L D QVK I GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 128/249 (51%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V+L S S H G VF WG +G LG G K +
Sbjct: 71 ALETLNVALVSCGKEHSLAVCHK-----GRVFAWG-AASEGQLGIG--------EFKETT 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+PK +++ + + +ACG H+ +++ G+VFSWG S G+LG G + P+ +
Sbjct: 117 FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G +H+ A++LSG + WG + L G+ V + P + G L+
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKT 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V SISCG HTAV+T G++FTFGD ++G LGH P+ VE ++GL + + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G HT A +
Sbjct: 295 GSDHTLAYI 303
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
P+ + + L+V ++CG H+ V +G VF+WG S G+LG G PK I L
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+ + I VACG YH+ A++ G +++WG ++ G LG G E S P+RV LEGI
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVS--IPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G + G L G+ V P + +LK L V +
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+GD G+LGH K P V +E
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGLV 289
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ CG T+A + T+G V + G
Sbjct: 290 SQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ S G + + GD + G LG P + +L+ L +CG H+ AV
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHS 309
C G++F WG +G+LG G+ KE +P + L +VACGH
Sbjct: 91 ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAV 365
+VAL+ G V++ G+ +GQLG + P++ + +S + ++A G +H
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195
Query: 366 LTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L+ + WG + G+L G+ R P + ALK V SI+CG TA +
Sbjct: 196 LSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ + L V +I+CG +H A++ + G+VF++G+ S G+LGH ++ P+L++ +
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286
Query: 127 NMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
+ + + CG HT A + +G + ++G G
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315
>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 485
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 160/348 (45%), Gaps = 33/348 (9%)
Query: 45 GVLGGGLNRVGSCFGVKMDSS-LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
GVLG G ++DS LP+ V +++ HAA V + GEVF+ G+
Sbjct: 140 GVLGQGSETTQCVAFTRIDSPPLPR---------VVHVSASFNHAAFVMQSGEVFTCGDN 190
Query: 104 SGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 162
S GH + P+L+++L + + VA G T +T G +YT G T+ G L
Sbjct: 191 SSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTH--GQL 248
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
GHG+ PK + V I+ GP + VT G +++FG G LGHG++
Sbjct: 249 GHGDTQDRPTPKMIEVLSS---VVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHD 305
Query: 223 VSIPREVESL--KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
PR ++ KG+ VR + G H A+ S+G ++TWG G G LG
Sbjct: 306 ELQPRPIQKFRRKGIHIVRVSAGDEHAVALD------------SNGFVYTWGKGYCGALG 353
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQAD 337
HGD+ K P + +L +V T L SG VY GS +G LG +D
Sbjct: 354 HGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSD 413
Query: 338 GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
L R+ L V +I+ G YH V+TS+ +++ +G +LGH
Sbjct: 414 KVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGH 461
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 140/284 (49%), Gaps = 25/284 (8%)
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEG 182
+L NM I G+YHT ++ S +Y+ G G G+LG G+E + V R++ P
Sbjct: 110 SLGNMQI---TTGKYHTLLISNS-SVYSCGSGLC--GVLGQGSETTQCVAFTRIDSP-PL 162
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAA 241
V +S H A V +G++FT GD + GH D + + PR VESLKG+ + A
Sbjct: 163 PRVVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVA 222
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G+ T + G ++T G G+LGHGD + + P + L +
Sbjct: 223 AGLNFTVFLTR------------QGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL--SSV 268
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS--FVEEIACG 359
++A G S +++T +G VY+ GS LG+ + +L R K + + ++ G
Sbjct: 269 VQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAG 328
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
H L S VYTWGKG G LGHGD ++ +P L+ +LK++
Sbjct: 329 DEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQ 372
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 22/238 (9%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D PK +E V+ V IA G + V + G V+S+G + LGHG D L
Sbjct: 251 GDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQ 308
Query: 119 PKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P+ I I +V + G+ H A+ +G +YTWG G G LGHG+E+ P+ +
Sbjct: 309 PRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVYTWGKGYC--GALGHGDEIEKTTPELL 366
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLK 233
L+ + T V+ ++G ++ FG FG LG DR+ V PR +++L+
Sbjct: 367 TS-LKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLR 425
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ + G++HT + S G++F +GD ++ +LGH + L PT
Sbjct: 426 AHHVSQISTGLYHTVVIT------------SRGQIFGFGDNERAQLGHDTLRSCLEPT 471
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 143/340 (42%), Gaps = 22/340 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
G++ L+ V+S G G LG G ++ + ID+ + V+ H V
Sbjct: 119 GKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNHAAFV 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG+++T GD + + GH + R+ L+GI ++ G T +T G
Sbjct: 179 MQSGEVFTCGDNSSS--CCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGH 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T G T G LGHGD + P+ +E L + V+ A G + +V E
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGPSYILSVTE----------- 283
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGHSLTVALTTSGHVY 321
+G ++++G G LGHG++ +L P + + RV+ G VAL ++G VY
Sbjct: 284 -NGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSNGFVY 342
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
T G G LG+ K + L ++ VL + VY +G G
Sbjct: 343 TWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGSMGFG 402
Query: 382 RLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG D +D P +++ L+ V I+ G T I
Sbjct: 403 SLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVI 442
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 110/236 (46%), Gaps = 19/236 (8%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP-REVESLKGLRTVRAACGVWH 246
I+ G +HT +++++ +++ G G GVLG G + + ++S R V + H
Sbjct: 116 ITTGKYHTLLISNS-SVYSCGSGLCGVLGQGSETTQCVAFTRIDSPPLPRVVHVSASFNH 174
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVA 305
A V++ SG++FT GD GH D + P V +L +VA
Sbjct: 175 AAFVMQ------------SGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVA 222
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
G + TV LT GHVYT G+ +GQLG+ D P +E S V +IA G ++
Sbjct: 223 AGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIE---VLSSVVQIAAGPSYIL 279
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+T VY++G GAN LGHG+ D P ++ + K + + A+ L
Sbjct: 280 SVTENGTVYSFGSGANFCLGHGEQHDELQPRPIQKFRRKGIHIVRVSAGDEHAVAL 335
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 4/156 (2%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ + ++ G HA ++ G V++WG+ G LGHG + + P+L+ +L N V
Sbjct: 320 IHIVRVSAGDEHAVALDSNGFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCA 379
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPK-RVNGPLEGIHVSSISCGPW 193
+ T + SG +Y G G+ FG LG VS V K R+ L HVS IS G +
Sbjct: 380 RKRKTFVLVNSGSVY--GFGSMGFGSLGFLDRRVSDKVLKPRILDTLRAHHVSQISTGLY 437
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
HT V+TS GQ+F FGD LGH +S P ++
Sbjct: 438 HTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTQI 473
>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
Length = 980
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 170/342 (49%), Gaps = 28/342 (8%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G H+ L+ G V S G+ S G+LG P+ I AL +N+ LV+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AV G ++ WG + G LG G + + ++PK++ L GI + ++CG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIK-TLAGIKIIQVACGHYHSVALSE 145
Query: 201 AGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQ+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196
Query: 260 SSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG F WG G+L G+ + P + AL ++CG+ T LT
Sbjct: 197 ---SLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 317 SGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G YGQLG +P A+ + P VE + V +I CGS H +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 375 WGKGAN--GRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGT 412
+G+G R H + + LV A L D QVK I GT
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGT 353
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 129/249 (51%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V+L S S H G VF WG + +G LG G K +
Sbjct: 71 ALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAAS-EGQLGIG--------EFKETT 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+PK +++ + + +ACG H+ +++ G+VFSWG S G+LG G + P+ +
Sbjct: 117 FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G +H+ A++LSG + WG + L G+ V + P + G L+
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKT 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V SISCG HTAV+T G++FTFGD ++G LGH P+ VE ++GL + + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G HT A +
Sbjct: 295 GSDHTLAYI 303
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 133/264 (50%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
P+ + + L+V ++CG H+ V +G VF+WG S G+LG G PK I L
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+ + I VACG YH+ A++ G +++WG ++ G LG G E S P+RV LEGI
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVS--IPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G + G L G+ V P + +LK L V +
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+GD G+LGH K P V +E
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGLV 289
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ CG T+A + T+G V + G
Sbjct: 290 SQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 23/236 (9%)
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ S G + + GD + G LG P + +L+ L +CG H+ AV
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAV 90
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHS 309
C G++F WG +G+LG G+ KE +P + L +VACGH
Sbjct: 91 ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAV 365
+VAL+ G V++ G+ +GQLG + P++ + +S + ++A G +H
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195
Query: 366 LTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L+ + WG + G+L G+ R P + ALK V SI+CG TA +
Sbjct: 196 LSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ + L V +I+CG +H A++ + G+VF++G+ S G+LGH ++ P+L++ +
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286
Query: 127 NMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
+ + + CG HT A + +G + ++G G
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRG 315
>gi|303271437|ref|XP_003055080.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463054|gb|EEH60332.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1071
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 140/456 (30%), Positives = 195/456 (42%), Gaps = 90/456 (19%)
Query: 34 DVFIWGE----GTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
DVF+WG T L + V V S +P AL A D ++IA G RHA
Sbjct: 220 DVFVWGRVPSVMTTPETLASSPHHVVVDRFVMTPSPVP-ALGGAAC-DPRSIALGTRHAV 277
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM------------NIELVACGE 137
+ G V++WG+ GGRLGHG D P + A ++ +V CG
Sbjct: 278 AATRAGGVYTWGDGVGGRLGHGDVVDRATPTRVRAADDVFDVKAGGGGDGGARAVVRCGG 337
Query: 138 YHTCAVTLSGD----------LYTWGDGTYNFGLLGHG------NEVSHWVPKRV----- 176
T +T D LY WG +FG+ G G + + W R+
Sbjct: 338 DRTVVLTRDRDDDGVEDGGGALYAWGGSGDDFGVGGGGGGSSAEDAATRWTLSRIWFSSS 397
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-------------SV 223
+ ++ +S G +H A V+ G LFT+G+G F LGHG S
Sbjct: 398 SSSSPEARITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGGGGGGGGGGASRPPTSE 457
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
PR VE L+G +CGVWHTAAVV+ G+L+TWGDGD G+LGH D
Sbjct: 458 PRPRRVEGLRGRVVADVSCGVWHTAAVVD------------DGQLYTWGDGDGGKLGHAD 505
Query: 284 KEAKL-VPT------------CVAALVEPNFCRV------ACGHSLTVALTTSGHVYTMG 324
+ VPT E N + +CG S T+AL +G + +G
Sbjct: 506 VTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAASCGQSHTLALDANGVAWCLG 565
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
S G+ G P P R+ V ++ G H A LT + +Y WG G G LG
Sbjct: 566 S--VGKTGAPPP--PTPRRIAS--IPDAVASLSSGDSHAAALTRRGRLYVWGVGKRGALG 619
Query: 385 HGDTDDRNSPSLVE-ALKDKQVKSIACGTNFTAAIC 419
HG + +P L+E AL+ + ++ + CG TA +
Sbjct: 620 HGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVV 655
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 17/181 (9%)
Query: 33 GDVFIWGEGTG---------DGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIAC 83
G ++ WG+G G D V RV + ++ ++ + +C
Sbjct: 488 GQLYTWGDGDGGKLGHADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAASC 547
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G H ++ G +W S G+ G P+ I ++ + L + G+ H A+
Sbjct: 548 GQSHTLALDANG--VAWCLGSVGKTGAPPPPT---PRRIASIPDAVASL-SSGDSHAAAL 601
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G LY WG G G LGHG P+ + G LEG + ++CGP TAVV A
Sbjct: 602 TRRGRLYVWGVG--KRGALGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVVDAAA 659
Query: 204 L 204
L
Sbjct: 660 L 660
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 166/337 (49%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H A+V G+++ +G + G+LG G + V P + AL +L CG HT
Sbjct: 35 ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G++Y G + G LG G+ ++ + ++ G + +A VT
Sbjct: 95 LVYTEKGNVYAAGGNSE--GQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTE 152
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
GQLF +GD + G +G D VS+P +V+ K + ++ +CG +H+A +
Sbjct: 153 DGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVSSI--SCGYYHSALIT--------- 201
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG ++ K VP V ++E +VACG TV LT +
Sbjct: 202 ---GDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME-KVNKVACGGEHTVVLTET- 256
Query: 319 HVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G YGQLG+ + +P V+ L + + I CG H AV+ ++T+G
Sbjct: 257 DVYTFGLGQYGQLGHGTFIFETSVPKSVK-HLRRHKICNITCGENHTAVVAENGLMFTFG 315
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G+ + N P+L V +ACG
Sbjct: 316 DGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACG 352
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 25/292 (8%)
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
L++CG+ HT VT +G LY + G+ N+G LG G++ + P V L+ CG
Sbjct: 34 LISCGDEHTAIVTGNGKLYMF--GSNNWGQLGLGSKNTVSKPTCVKA-LKPEKTKLAVCG 90
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAV 250
HT V T G ++ G + G LG GD + S + ++ A G + +AAV
Sbjct: 91 RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAV 150
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
E G+LF WGD +G++G D+ VP C + +P ++CG+
Sbjct: 151 TE------------DGQLFVWGDNSEGQIGLADEACVSVP-CQVDVGKP-VSSISCGYYH 196
Query: 311 TVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +T G +YT G P G+LG + ++P V G + K V ++ACG H VLT
Sbjct: 197 SALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEK--VNKVACGGEHTVVLT 254
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAI 418
+T+VYT+G G G+LGHG S P V+ L+ ++ +I CG N TA +
Sbjct: 255 -ETDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVV 305
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 151/319 (47%), Gaps = 29/319 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K S P +++ + CG H + ++G V++ G S G+LG G +
Sbjct: 64 LGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERS 123
Query: 118 HPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
LI +N + I+ +A G Y + AVT G L+ WGD + G +G +E VP +V
Sbjct: 124 TFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSE--GQIGLADEACVSVPCQV 181
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG--HGDRKSVSIPREVESLKG 234
+ G VSSISCG +H+A++T G+L+TFG+ G LG K+ +P+ V +
Sbjct: 182 D---VGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME 238
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCV 293
+ + ACG HT + E V +T+G G G+LGHG + VP V
Sbjct: 239 -KVNKVACGGEHTVVLTETDV-------------YTFGLGQYGQLGHGTFIFETSVPKSV 284
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF- 352
L C + CG + T + +G ++T G +G+LG + N+ + L +F
Sbjct: 285 KHLRRHKICNITCGENHTAVVAENGLMFTFGDGRHGKLG--LGEENYTNQFDPTLCYNFL 342
Query: 353 ---VEEIACGSYHVAVLTS 368
V +ACG H+ V +
Sbjct: 343 RFTVLLVACGGCHMLVFAA 361
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 24/220 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ + +G +G +C V + K + S I+CG H+AL+
Sbjct: 154 GQLFVWGDNS-EGQIGLADE---ACVSVPCQVDVGKPVSS--------ISCGYYHSALIT 201
Query: 93 KQGEVFSWGEESGGRLG---HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
GE++++GE G+LG + ++ + + + +N VACG HT +T + D+
Sbjct: 202 GDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNK--VACGGEHTVVLTET-DV 258
Query: 150 YTWGDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
YT+G G Y G LGHG + VPK V L + +I+CG HTAVV G +FTFG
Sbjct: 259 YTFGLGQY--GQLGHGTFIFETSVPKSVKH-LRRHKICNITCGENHTAVVAENGLMFTFG 315
Query: 209 DGTFGVLGHGDRKSVSI--PREVESLKGLRTVRAACGVWH 246
DG G LG G+ + P + + ACG H
Sbjct: 316 DGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 189/396 (47%), Gaps = 36/396 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT G LG G + + S + PK E+ + ++ G H+A ++++
Sbjct: 71 VYTWGNGT-LGQLGHG-SVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAIDEE 128
Query: 95 GEVFSWGEESGGRLGHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G+++ WG +LG G S++ P+ ++AL + I V+CG+Y T AV G +Y+WG
Sbjct: 129 GKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYSWG 188
Query: 154 DG--TYNFGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
G T R+ L +G+ ++++ CG +HT +T G+++ +G+
Sbjct: 189 WGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGN 248
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G +G LG+G+ + +P +E V A G + S + G+L+
Sbjct: 249 GEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGR------------DFSFALTDKGELY 296
Query: 270 TWGDGDKGRLGHGDKEA------KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
+WG + +LG G A + +P V A ++A G+ A+T G +Y
Sbjct: 297 SWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRLYMW 356
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+ ++ + P+ + +++ + ++ACG + LT +V+T+GKG++ L
Sbjct: 357 GAKIWIE----------PHEMTA-VNEHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCL 405
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
GHGD ++ P ++AL + S++CG AI
Sbjct: 406 GHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAIA 441
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 152/310 (49%), Gaps = 41/310 (13%)
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-------HWVPKRVNGPLEGIHVSSISCGP 192
T + +YTWG+GT G LGHG+ + + ++ LEG ++ + G
Sbjct: 62 TASYATQSSVYTWGNGT--LGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGA 119
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV-SIPREVESLKGLRTVRAACGVWHTAAVV 251
H+A + G+L+ +G + LG G+ + ++PREVE+LKG++ V +CG + TAAV
Sbjct: 120 SHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVD 179
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGD---KGRLGHGDKEAKLVPT--CVAALVEPN--FCRV 304
E GK+++WG G KG G G K PT + LV+ V
Sbjct: 180 E------------DGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATV 227
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHV 363
CG TVALT G ++ G+ YG+LGN ++D ++P +E SK V IA G
Sbjct: 228 ECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE-FFSKDNVVSIAAGRDFS 286
Query: 364 AVLTSKTEVYTWGKGANGRLGHG-----DTDDRNS-PSLVEALKDKQVKSIACGTNFTAA 417
LT K E+Y+WG + +LG G D + S P LVEA VK IA G + AA
Sbjct: 287 FALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAA 346
Query: 418 IC----LHKW 423
+ L+ W
Sbjct: 347 VTEDGRLYMW 356
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 30/260 (11%)
Query: 63 DSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D P+ L + V + + + CG H + K GE+++WG GRLG+G P+
Sbjct: 207 DEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPE 266
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW----VPKRV 176
I+ S N+ +A G + A+T G+LY+WG + N +G G + + +P V
Sbjct: 267 PIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLV 326
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
G+ V I+ G H A VT G+L+ +G K P E+ ++ +
Sbjct: 327 E-AFNGLLVKQIAAGYDHAAAVTEDGRLYMWG-----------AKIWIEPHEMTAVNEHK 374
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ ACG +T + + GK+FT+G G LGHGD++ +L P + AL
Sbjct: 375 MTQVACGRQYTVGLTD------------DGKVFTFGKGSSNCLGHGDRKNQLQPVKIQAL 422
Query: 297 VEPNFCRVACGHSLTVALTT 316
N V+CG A+ T
Sbjct: 423 AGVNITSVSCGDYHMGAIAT 442
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 193/400 (48%), Gaps = 46/400 (11%)
Query: 41 GTGD-GVLGGGLNRVG----SCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
G GD GV G NR G S F +++ SL ++L ++ V A G + + ++G
Sbjct: 36 GEGDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKV---AAGSETSYFLTEEG 92
Query: 96 EVFSWGEESGGRLGHGV-----------DSDVLHPKLIDALS-NMNIELVAC--GEYHTC 141
+V+ G S G+L SD+ +L++ L + + V+C G H
Sbjct: 93 KVYCCGLNSTGQLARETHQGSANRSKEYSSDI---ELMEGLPPDCKVVQVSCFNGAEHVL 149
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV-NGPLEGIHVSSISCGPWHTAVVTS 200
VT +G +Y+ G N G LG G+ + P + L+ + V S SC H+ VV+S
Sbjct: 150 VVTSAGQVYSCG--CNNHGQLGLGS--TKMSPSLLLVESLKHVRVLSASCSYHHSVVVSS 205
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR-AACGVWHTAAVVEVMVGNSS 259
G F+FG G LG G R + +P VE L VR AACG +HT + E
Sbjct: 206 DGSAFSFGLNDCGQLGIGTRPNQLLPHRVE-LPSPHLVRLAACGQYHTIFLTE------- 257
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G +F+ G G+LG G + + VPT +AAL E +ACG+S T + G
Sbjct: 258 -----EGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGK 312
Query: 320 VYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
++T G GQLG D P +VE L V +I+CG++ VL+ E++++G
Sbjct: 313 LFTFGYNHQGQLGLGHTDSVSSPMQVE-TLRNVKVVKISCGTHFTCVLSESGELWSFGCN 371
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+LG GD+ DR P LV ++ K + IACG + AI
Sbjct: 372 CHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 17/292 (5%)
Query: 78 VQNIAC--GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
V ++C G H +V G+V+S G + G+LG G L+++L ++ + +C
Sbjct: 136 VVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASC 195
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
+H+ V+ G +++G + G LG G + +P RV P + V +CG +HT
Sbjct: 196 SYHHSVVVSSDGSAFSFG--LNDCGQLGIGTRPNQLLPHRVELPSPHL-VRLAACGQYHT 252
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T G +F+ G G LG G R S ++P + +L+ ACG HT V+E
Sbjct: 253 IFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLE--- 309
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
GKLFT+G +G+LG G ++ P V L +++CG T L+
Sbjct: 310 ---------DGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLS 360
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
SG +++ G +GQLG + +L + ++K + EIACG +H+ ++
Sbjct: 361 ESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
S P +E+ + V I+CG ++++ GE++S+G G+LG G +D L P L+ +
Sbjct: 333 SSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPS 392
Query: 125 LSNMNIELVACGEYHTCAVT 144
++ N+ +ACG +H A++
Sbjct: 393 MTKKNLSEIACGFHHLVAIS 412
>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
vinifera]
gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
Length = 492
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 22/315 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V ++ HAA V + GEVF+ G+ S GHG + P+L++AL + + VA G
Sbjct: 165 VAQVSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 195
T +T+ G +YT G T+ G LGHG+ V PK V LEG+ V I+ GP +
Sbjct: 225 LSFTVFLTMKGHVYTCGTNTH--GQLGHGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYA 281
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 253
VT G + +FG G+ LGHG++ + PR ++S K + VR + G H A+
Sbjct: 282 MAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALD-- 339
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SSG ++TWG G G LGHGD+ K P +++L +V T
Sbjct: 340 ----------SSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFV 389
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
L +G VY G +G LG P +D + + L ++ +I+ G YH + +K
Sbjct: 390 LVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKG 449
Query: 371 EVYTWGKGANGRLGH 385
+++ +G +LGH
Sbjct: 450 QIFGFGDNERAQLGH 464
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 157/322 (48%), Gaps = 26/322 (8%)
Query: 87 HAAL-VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTL 145
+AAL +N Q ++F E+ R+ + S V I S N++ + G YHT +
Sbjct: 71 YAALSLNAQKDLFDRCGENWKRVLRFLQS-VEQSSYISETSAGNMQ-ITTGRYHTLLIK- 127
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
D + G+ G+LGHG E + V R+N P HV+ +S H A V +G++
Sbjct: 128 --DSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLA-HVAQVSASHNHAAFVMQSGEV 184
Query: 205 FTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
FT GD + GHGD + + PR VE+LKG+ + A G+ T +
Sbjct: 185 FTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLT------------ 232
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGHSLTVALTTSGHVY 321
G ++T G G+LGHGD + P V L V P ++A G S +A+T G V+
Sbjct: 233 MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGP-VVQIAAGPSYAMAVTDDGTVH 291
Query: 322 TMGSPVYGQLGNPQADGKL-PNRVEGKLSKSF-VEEIACGSYHVAVLTSKTEVYTWGKGA 379
+ GS LG+ + +L P ++ K+ V I+ G HV L S VYTWGKG
Sbjct: 292 SFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGY 351
Query: 380 NGRLGHGDTDDRNSPSLVEALK 401
G LGHGD D+ +P ++ +LK
Sbjct: 352 CGALGHGDEIDKTTPEILSSLK 373
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 148/341 (43%), Gaps = 21/341 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
GR+ L+ K V+S G G LGHG ++ + I+ ++ V+ H V
Sbjct: 119 GRYHTLLIKDSSVYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFV 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG+++T GD + +F GHG+ V R+ L+G+ ++ G T +T G
Sbjct: 179 MQSGEVFTCGDNS-SF-CCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGH 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSSSN 262
++T G T G LGHGD P+ VE L+G+ V+ A G + AV +
Sbjct: 237 VYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTD---------- 286
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLTVALTTSGHV 320
G + ++G G LGHG++ +L P + + R++ G VAL +SG V
Sbjct: 287 --DGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFV 344
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
YT G G LG+ K + L ++ VL VY +G
Sbjct: 345 YTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGF 404
Query: 381 GRLG---HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G LG G +D P ++++L+ + I+ G T A+
Sbjct: 405 GSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAV 445
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 136/295 (46%), Gaps = 27/295 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ + + +A G + +G V++ G + G+LGHG D PK+++ L
Sbjct: 207 PRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLE 266
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ + +A G + AVT G ++++G G+ NF LGHG + + P+ + + IH
Sbjct: 267 GVGPVVQIAAGPSYAMAVTDDGTVHSFGSGS-NF-CLGHGEQHNELRPRAIQSFRRKTIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V IS G H + S+G ++T+G G G LGHGD + P + SLK V+
Sbjct: 325 VVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK---LVPTCVAALVEPNF 301
T +V+ +G ++ +G G LG D+ A + P + +L
Sbjct: 385 RKTFVLVD------------TGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYI 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEE 355
+++ G TVA+ G ++ G QLG+ G +P + FV+E
Sbjct: 433 SQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI-------FVQE 480
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAV-VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G +D PK +E V V IA G +A V G V S+G S LGHG + L
Sbjct: 251 GDTVDRRTPKIVELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL 310
Query: 118 HPKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P+ I + I +V + G+ H A+ SG +YTWG G G LGHG+E+ P+
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYC--GALGHGDEIDKTTPE- 367
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS---VSIPREVESL 232
+ L+ + T V+ G ++ FG FG LG DR + V P ++SL
Sbjct: 368 ILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+G + + G++HT AV + G++F +GD ++ +LGH VPT
Sbjct: 428 RGHYISQISTGLYHTVAV------------NNKGQIFGFGDNERAQLGHDTLRGCPVPT 474
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
VY+ GS + G LG+ P+ + + V +++ H A + EV+T G
Sbjct: 131 VYSCGSSLCGVLGHGPETTQCVAFSRINFPPLAHVAQVSASHNHAAFVMQSGEVFTCGDN 190
Query: 379 ANGRLGHGDT-DDRNSPSLVEALKDKQVKSIACGTNFTAAICL--HKWVSGVD 428
++ GHGDT P LVEALK K +A G +FT + + H + G +
Sbjct: 191 SSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTN 243
>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
CNS-205]
Length = 556
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 189/420 (45%), Gaps = 29/420 (6%)
Query: 1 MKAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGV 60
+ M A +SL++A + S D F WG+ + DG LG G S
Sbjct: 29 LAVMVTQAATMSLAAAENGPSAAIRASD-----TYFAWGDNS-DGQLGNGTTTGSST--- 79
Query: 61 KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
+D LP + + GG H+ + G V +WG G+LG+G ++ P
Sbjct: 80 PVDVYLPAGTT------ITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPV 133
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
+D + I +A G +H+ A+T +G + WG+ + G LG+G + P V+ P
Sbjct: 134 DVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLH--GQLGNGGTTNMSTPVGVSLP- 190
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
G+ +++++ G +H+ VTS G + +GD + G LG+G S P +V+
Sbjct: 191 AGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVD---------L 241
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
G TA V S + S+G WG+ G+LG+GD + P V
Sbjct: 242 PAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVT 301
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACG 359
VA G ++ALT +G V G V GQLGN G P V+ + + + IA G
Sbjct: 302 ITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVD-LPTGATINAIAAG 360
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
LT+ V WG+ +G+LG+GDT +R++P V+ + ++A G + A+
Sbjct: 361 FDFGLALTTAGAVVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALV 420
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 33 GDVFIWGEGTGDGVLGGG--LNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
G V WG G LG G NR +D LP + IA G H+
Sbjct: 108 GAVLAWGRNF-SGQLGNGDTTNR-----STPVDVDLPAGTT------ITAIAAGAFHSLA 155
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G V +WGE G+LG+G +++ P + + + I VA G +H+ AVT +G +
Sbjct: 156 LTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVTSTGAVL 215
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS---SISCGPWHTAVVTSAGQLFTF 207
WGD + G LG+G P V+ P G ++ + G H+ +TS G +
Sbjct: 216 AWGDNSN--GQLGNGTTTGSSTPVDVDLP-AGTTITAVAAGVAGAAHSLALTSTGAALAW 272
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+ G LG+GD + S P +V+ G+ A G H+ A+ ++G
Sbjct: 273 GNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLAL------------TAAGA 320
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ WG G+LG+G P V +A G +ALTT+G V G V
Sbjct: 321 VVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNV 380
Query: 328 YGQLGNPQADGKLPNR---VEGKLSKSF-VEEIACGSYH----VAVLTSKTEV 372
GQLGN G NR V+ L + +A G H VA+ TS T +
Sbjct: 381 SGQLGN----GDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVALPTSTTTL 429
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 166/361 (45%), Gaps = 31/361 (8%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G + D P L + V IA G RH V + G V++WG+ + G+LG G ++ L
Sbjct: 142 GTRADRHTPVQLPE--LTGVTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLT 199
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L+ + +A G+YHT AV G ++ WG+ G LG G P +V G
Sbjct: 200 PVQVPGLT--GVTAIAAGDYHTLAVRQDGTVWAWGNNA--LGQLGDGTYTERLTPVQVPG 255
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
L G V++IS G HT V G ++ +GD +G LG G R P +V L G+ +
Sbjct: 256 -LTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI 312
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
A G HT AV + G ++ WG G+LG G + +L P V L
Sbjct: 313 --AEGRRHTFAVRQ------------DGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLT- 357
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIA 357
+ +A G T+A+ G V+ G V+GQLG+ +L P +V G + V IA
Sbjct: 358 -SVTAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPG---LTGVTAIA 413
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H + V+ WG G+LG G DR +P V L V +IA G T A
Sbjct: 414 AGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDL--TSVTAIAAGDYHTLA 471
Query: 418 I 418
+
Sbjct: 472 V 472
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 157/342 (45%), Gaps = 29/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA G RH V++ G V++WG+ G+LG G +D P + L+ + +A G
Sbjct: 109 VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELT--GVTAIAAGR 166
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT AV G ++ WGD + G LG G + P +V G L G V++I+ G +HT
Sbjct: 167 RHTFAVRQDGTVWAWGDNAW--GQLGDGTRTNRLTPVQVPG-LTG--VTAIAAGDYHTLA 221
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
V G ++ +G+ G LG G P +V L G+ + A HT AV +
Sbjct: 222 VRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTGVTAISAGES--HTVAVRQ----- 274
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G ++ WGD G+LG G + +L P V L +A G T A+
Sbjct: 275 -------DGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGL--SGVTAIAEGRRHTFAVRQD 325
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G +GQLG+ ++D P +V S V IA G YH + V+ WG
Sbjct: 326 GTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLTS---VTAIAAGDYHTLAVRQDGTVWAWG 382
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G DR +P V L V +IA G + T A+
Sbjct: 383 DNVWGQLGDGTYTDRLTPVQVPGLTG--VTAIAAGESHTVAM 422
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 157/342 (45%), Gaps = 29/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +A G H V + G V++WG G+LG G ++ P + L+ + +A G
Sbjct: 59 VTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT--GVTAIAAGR 116
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT AV+ G ++ WGD ++G LG G P ++ E V++I+ G HT
Sbjct: 117 RHTFAVSQDGTVWAWGDN--DWGQLGDGTRADRHTPVQLP---ELTGVTAIAAGRRHTFA 171
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
V G ++ +GD +G LG G R + P +V L G+ + A G +HT AV +
Sbjct: 172 VRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTGVTAI--AAGDYHTLAVRQ----- 224
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G ++ WG+ G+LG G +L P V L ++ G S TVA+
Sbjct: 225 -------DGTVWAWGNNALGQLGDGTYTERLTPVQVPGLT--GVTAISAGESHTVAVRQD 275
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G V+GQLG+ + D P +V G S V IA G H + V+ WG
Sbjct: 276 GTVWAWGDNVWGQLGDGTRTDRLTPVQVPG---LSGVTAIAEGRRHTFAVRQDGTVWAWG 332
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G DR +P V L V +IA G T A+
Sbjct: 333 LNFWGQLGDGTRSDRLTPVQVPDL--TSVTAIAAGDYHTLAV 372
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 154/342 (45%), Gaps = 29/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V G H V + G ++WG + G+LG G +D L P + L+ + VA G
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLT--GVTAVAAGR 66
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+HT AV G ++ WG + G LG G P +V G L G V++I+ G HT
Sbjct: 67 HHTFAVRQDGTVWAWGLNVW--GQLGDGTHTERHTPVQVPG-LTG--VTAIAAGRRHTFA 121
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
V+ G ++ +GD +G LG G R P ++ L G+ + A G HT AV +
Sbjct: 122 VSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTGVTAI--AAGRRHTFAVRQ----- 174
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G ++ WGD G+LG G + +L P V L +A G T+A+
Sbjct: 175 -------DGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLT--GVTAIAAGDYHTLAVRQD 225
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G+ GQLG+ +L P +V G + V I+ G H + V+ WG
Sbjct: 226 GTVWAWGNNALGQLGDGTYTERLTPVQVPG---LTGVTAISAGESHTVAVRQDGTVWAWG 282
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G DR +P V L V +IA G T A+
Sbjct: 283 DNVWGQLGDGTRTDRLTPVQVPGLSG--VTAIAEGRRHTFAV 322
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 157/344 (45%), Gaps = 30/344 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA G H + + G V++WG+ G+LG G +D L P + L++ + +A G+
Sbjct: 409 VTAIAAGESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQVPDLTS--VTAIAAGD 466
Query: 138 YHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHV-SSISCGPWHT 195
YHT AV G + WG +N +G LG G P V G L G+ V ++++ G HT
Sbjct: 467 YHTLAVRQDGTVCAWG---FNAYGQLGDGTSSRSPSPVMVPG-LTGVTVFAALAAGDSHT 522
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
V G ++ +G G LG G IP ++ L G+ + A HT A +
Sbjct: 523 VAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAGVTAIAAGSA--HTLAAGQ--- 577
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +++WG G+LG G +L P V L +A G + +VAL
Sbjct: 578 ---------DGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLT--GVSAMAAGDAHSVALL 626
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G V G +GQLG+ +L P +V G + V +A GS H L V+
Sbjct: 627 QDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGL---TGVTAVAAGSLHTVALRQDGTVWA 683
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG G+LG G T R +P V+ L D V +IA G T A+
Sbjct: 684 WGYNDLGQLGDGTTTRRLAPVQVQGLTD--VTAIAAGYFHTVAV 725
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 29/340 (8%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+A G H V + G V++WG + G+LG G D P I L+ + +A G HT
Sbjct: 515 LAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPGLAG--VTAIAAGSAHT 572
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A G +++WG +Y G LG G P +V G L G VS+++ G H+ +
Sbjct: 573 LAAGQDGAVWSWGANSY--GQLGDGTTTHRLSPVQVPG-LTG--VSAMAAGDAHSVALLQ 627
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G + +G ++G LG G + P +V L G+ V A G HT A+ +
Sbjct: 628 DGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAV--AAGSLHTVALRQ-------- 677
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
G ++ WG D G+LG G +L P V L + +A G+ TVA+ G V
Sbjct: 678 ----DGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTD--VTAIAAGYFHTVAVRQDGTV 731
Query: 321 YTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
+ G ++GQLG+ + + P +V+ + V +A G H + V+ WG +
Sbjct: 732 WAWGYNLWGQLGDGSSTARSTPVQVQ---ELTGVSALAAGYAHTVAVKQDGTVWAWGNNS 788
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+LG+G + DR +P VE L V ++ G TAA+
Sbjct: 789 GTQLGNGSSTDRYTPVWVEGLTG--VSALTAGRFHTAAVS 826
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 157/351 (44%), Gaps = 30/351 (8%)
Query: 46 VLGGGLNRVGSCF-GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
V GLN G G +D +P + + V IA G H + G V+SWG S
Sbjct: 531 VWAWGLNASGQLGDGATIDRRIPVQIPG--LAGVTAIAAGSAHTLAAGQDGAVWSWGANS 588
Query: 105 GGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH 164
G+LG G + L P + L+ + +A G+ H+ A+ G + WG ++ G LG
Sbjct: 589 YGQLGDGTTTHRLSPVQVPGLT--GVSAMAAGDAHSVALLQDGTVSAWGRNSW--GQLGD 644
Query: 165 GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
G + P +V+G L G V++++ G HT + G ++ +G G LG G
Sbjct: 645 GTTAARLTPVQVHG-LTG--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRL 701
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
P +V+ L + + A G +HT AV + G ++ WG G+LG G
Sbjct: 702 APVQVQGLTDVTAI--AAGYFHTVAVRQ------------DGTVWAWGYNLWGQLGDGSS 747
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNR 343
A+ P V L +A G++ TVA+ G V+ G+ QLGN D P
Sbjct: 748 TARSTPVQVQELT--GVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVW 805
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
VEG + V + G +H A ++ + + WG+ G++G G T DR P
Sbjct: 806 VEG---LTGVSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGDGTTADRPRP 853
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 11/155 (7%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
DV IA G H V + G V++WG G+LG G + P + L+ + +A G
Sbjct: 711 DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTG--VSALAAG 768
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGL-LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
HT AV G ++ WG+ N G LG+G+ + P V G L G VS+++ G +HT
Sbjct: 769 YAHTVAVKQDGTVWAWGN---NSGTQLGNGSSTDRYTPVWVEG-LTG--VSALTAGRFHT 822
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
A V+ G + +G FG + GD + PR V+
Sbjct: 823 AAVSPEGFGWAWGRNNFGQV--GDGTTADRPRPVD 855
>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
Length = 1059
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 122/371 (32%), Positives = 182/371 (49%), Gaps = 37/371 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF WG + DG L G + S PK + LD++ I+CG +H +V K
Sbjct: 4 VFGWGR-SNDGQLSIGFSEETSILS-------PKEVSRLQELDIKEISCGEKHTLIVTKD 55
Query: 95 GEVFSWGEESGGRLGH------GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
G+++S G G LGH V DV+ +L+ +LS+M + A G + +T +G+
Sbjct: 56 GKLYSCGSNEYGELGHSKPRSRAVSIDVV--ELVSSLSSMQVIQAAGGSEFSLVITTAGE 113
Query: 149 LYTWGDGTYNFGLLGHG--NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
+++WG + G LG G ++ PK + L V I+CG H +T G+LF+
Sbjct: 114 VFSWGRN--DKGQLGRGKLSKEEERKPKLMKS-LAVCTVVQITCGANHCLALTDDGRLFS 170
Query: 207 FGDGTFGVLGHGDRKSV-SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+G +G LG G S P+++ L+G+ + A G GN S S
Sbjct: 171 WGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASG------------GNHSFILTWS 218
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
+F WG G+LG D+ K PT +L ++CG TVALT G V++ G+
Sbjct: 219 RAVFGWGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGA 278
Query: 326 PVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRL 383
+GQLG N + LP RV +L S + ++ACG H VA S ++Y +G G +G+L
Sbjct: 279 GGFGQLGHNSTQNEILPKRV-MELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQL 337
Query: 384 GHGDTDDRNSP 394
G GDT RNSP
Sbjct: 338 GLGDTSARNSP 348
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 152/331 (45%), Gaps = 24/331 (7%)
Query: 97 VFSWGEESGGRLGHGV--DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
VF WG + G+L G ++ +L PK + L ++I+ ++CGE HT VT G LY+ G
Sbjct: 4 VFGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGS 63
Query: 155 GTYNFGLLGHGNEVSHWVPKRVN---GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
Y G LGH S V V L + V + G + V+T+AG++F++G
Sbjct: 64 NEY--GELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRND 121
Query: 212 FGVLGHGD--RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG G ++ P+ ++SL V+ CG H A+ + G+LF
Sbjct: 122 KGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTD------------DGRLF 169
Query: 270 TWGDGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+WG G+LG G + P + L ++A G + + LT S V+ G +
Sbjct: 170 SWGCNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSF 229
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG N + D P + L V I+CG H LT + V+++G G G+LGH
Sbjct: 230 GQLGLNDEYDKSHPTLCKS-LRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNS 288
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
T + P V L + +ACG T A
Sbjct: 289 TQNEILPKRVMELMGSVISQVACGRRHTVAF 319
>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
Length = 660
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 176/380 (46%), Gaps = 59/380 (15%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG--HGVDSDVLHPKLIDA 124
PK LE + ++ I+ H++ V+ G+++ G G+LG + +++ +++ A
Sbjct: 87 PKNLEK---IYIKQISTSQNHSSCVSSNGDLYVCGSALHGKLGLENLTMANINKFQILTA 143
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN------G 178
L + + VACG+YHT A+T + +Y WG Y K+V G
Sbjct: 144 LKGIKVLQVACGDYHTLALTENDQVYAWGGTLY----------------KKVGQRGGKPG 187
Query: 179 PLEGIH---VSSISCGPWHTAVVTSAGQLFTFGDG----TFGVLGHGDRKSVSIPREVES 231
P+ + V+ I CG +H+ +T+ G ++T+G G G LG G K + IP +++
Sbjct: 188 PIHQLTNKGVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQIQF 247
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
K + ++ +CG +HT A+++ +L+ WG G+ G LG G L
Sbjct: 248 FKNKKVIKVSCGQFHTMALID------------DNQLYGWGAGELGELGSGKVLYFLYLL 295
Query: 292 CVAALV-------------EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG 338
+ L +P + CG T+ L G+VY+ G YGQLG +
Sbjct: 296 IILILKKYITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYSTGYGSYGQLGLKTTNN 355
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
++ L+K + +IA G H VLT +V++ G A G+LG GD + R + +
Sbjct: 356 HCEFQLVWTLTKKKIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHIS 415
Query: 399 ALKDKQVKSIACGTNFTAAI 418
AL K V I+ G + + AI
Sbjct: 416 ALAGKNVVEISAGGSHSWAI 435
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 34/239 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD++ WG G G N+ G D +P+ ++ V ++CG H +
Sbjct: 214 GDIYTWGGG------GQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMALI 267
Query: 93 KQGEVFSWGEESGGRLGHG-------------------VDSDVLHPKLIDALSNMNIELV 133
+++ WG G LG G ++ + + K + I +
Sbjct: 268 DDNQLYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKK------DPQISDI 321
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
CG +HT + G +Y+ G G+Y G LG +H + V L + I+ G
Sbjct: 322 KCGGHHTLILLNIGYVYSTGYGSY--GQLGLKTTNNHCEFQLV-WTLTKKKIIKIAAGWN 378
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V+T +F+ G +G LG GD +S ++ + +L G V + G H+ A++E
Sbjct: 379 HSLVLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVVEISAGGSHSWAILE 437
>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
anophagefferens]
Length = 369
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 150/320 (46%), Gaps = 44/320 (13%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+ V CG H +T +G++YTWG G FG LGHG+ S P+ V G L G+ + ++
Sbjct: 2 VAAVCCGGQHAAVLTAAGEVYTWGRG--GFGRLGHGDAHSLKAPRLVRGALVGVVCAQVA 59
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVL------GHGDRKSVSIPREVESLKG--LRTVRAA 241
CG +TA V++ G L+T+G G G L GHG V PR +++ G +R +
Sbjct: 60 CGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVG 119
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE--------AKLVPTC- 292
G +HT A+V S ++TWG G+LG+ + + A VP
Sbjct: 120 PGGYHTVALV------------SPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPR 167
Query: 293 -VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---------NPQADGKLPN 342
V ++ RV G T LT G Y G GQLG N + P+
Sbjct: 168 RVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPD 227
Query: 343 -RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
R+ +L V +IACG H LT EV++ G G G+LGHG+ D+ P +V LK
Sbjct: 228 FRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLK 287
Query: 402 --DKQVKSIACGTNFTAAIC 419
+ V +ACG N T +C
Sbjct: 288 ASRRDVLEVACGNNGTLVLC 307
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 144/311 (46%), Gaps = 28/311 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI-DALSNMNIELVACG 136
V + CGG+HAA++ GEV++WG GRLGHG + P+L+ AL + VACG
Sbjct: 2 VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-----LEGIHVSSISCG 191
+T AV+ G LYTWG G G LG G+ H V P G V IS G
Sbjct: 62 FAYTAAVSAQGALYTWGAG--ENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVG 119
Query: 192 P--WHTAVVTSAGQLFTFGDGTFGVLGHGDRKS----------VSIPREVESLKGLRTVR 239
P +HT + S ++T+G G LG+ + V PR V+S+ GLR R
Sbjct: 120 PGGYHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRR 179
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT--CVAALV 297
G HTA ++ ++ C G GD H ++ P + L
Sbjct: 180 VVAGWGHTA----LLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLG 235
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKL--SKSFVEE 355
++ACG +VALT G V++ G+ GQLG+ D + RV +L S+ V E
Sbjct: 236 AKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLE 295
Query: 356 IACGSYHVAVL 366
+ACG+ VL
Sbjct: 296 VACGNNGTLVL 306
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE-ALKDKQVKSIACG 411
V + CG H AVLT+ EVYTWG+G GRLGHGD +P LV AL +ACG
Sbjct: 2 VAAVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACG 61
Query: 412 TNFTAAI----CLHKWVSG 426
+TAA+ L+ W +G
Sbjct: 62 FAYTAAVSAQGALYTWGAG 80
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL------HP- 119
P+ ++S L V+ + G H AL+ +G + G G+LG G D + HP
Sbjct: 166 PRRVDSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGLG-DPESFPHNERGHPY 224
Query: 120 ----KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
+L+D L + +ACG H+ A+T G++++ G G N G LGHGN + P+
Sbjct: 225 QPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAG--NKGQLGHGNVDNEQFPRV 282
Query: 176 VN 177
V+
Sbjct: 283 VS 284
>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
Length = 1914
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 148/315 (46%), Gaps = 37/315 (11%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
I+ + + I VA G H V + +YTWG+G+ G LGHG+ + P+ V L+
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSK--GQLGHGDLLGRSKPEMVEA-LK 691
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + CG + V+ G + T GDG+ G LGHGD S S PR +E L + +
Sbjct: 692 GKSIVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAIS 751
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG H AV S G++F WG G G LG GD+E P V + EP F
Sbjct: 752 CGPHHVVAV------------GSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQ-ISEPVF 798
Query: 302 CR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-----------------KLPNR 343
R V CG T+ LT G V G+ +LG G K+P
Sbjct: 799 IREVKCGVDGTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTV 858
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE--ALK 401
V L+ ++A G +H +VL +VYT+G+ G+LG G T R++P V+ ++
Sbjct: 859 VRA-LTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSIS 917
Query: 402 DKQVKSIACGTNFTA 416
DK V +ACG FTA
Sbjct: 918 DKTVTMLACGDMFTA 932
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 154/329 (46%), Gaps = 40/329 (12%)
Query: 70 LESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL---HPKLIDALS 126
+E + ++ +A G H +V + V++WGE S G+LGHG D+L P++++AL
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHG---DLLGRSKPEMVEALK 691
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+I CG+ + V+ +G + T GDG+ G LGHG+ +S P+ + PL + V
Sbjct: 692 GKSIVRACCGDGFSVFVSDNGIVMTCGDGSN--GCLGHGDWMSASRPRLIE-PLLSVDVR 748
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+ISCGP H V S G++F +G G G LG GD + P+EV+ + + CGV
Sbjct: 749 AISCGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDG 808
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL----------------VP 290
T + ++ G + G+ + +LG ++ L VP
Sbjct: 809 TMFLTDM------------GSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVP 856
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEG-KL 348
T V AL +A G T L G VYT G + GQLG + P V+ +
Sbjct: 857 TVVRALTNHRAIDMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSI 916
Query: 349 SKSFVEEIACGSYHVAV-LTSKTEVYTWG 376
S V +ACG AV + S+ ++ WG
Sbjct: 917 SDKTVTMLACGDMFTAVGINSENALFFWG 945
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WGEG+ G LG G + S P+ +E+ + CG + V+
Sbjct: 662 VYTWGEGS-KGQLG---------HGDLLGRSKPEMVEALKGKSIVRACCGDGFSVFVSDN 711
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V + G+ S G LGHG P+LI+ L ++++ ++CG +H AV G+++ WG
Sbjct: 712 GIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAVGSDGEVFAWGR 771
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G + G LG G+E H+ P+ V E + + + CG T +T G + G+
Sbjct: 772 GKH--GCLGLGDEEDHFSPQEVQIS-EPVFIREVKCGVDGTMFLTDMGSVLACGNNENNK 828
Query: 215 LGHGDRKSV----------------SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
LG R+ +P V +L R + A G HT+ +VE
Sbjct: 829 LGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVLVE------ 882
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA--ALVEPNFCRVACGHSLT 311
GK++T+G +G+LG G + + P V ++ + +ACG T
Sbjct: 883 ------PGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDMFT 931
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 349 SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+K + ++A G H+ V+ + VYTWG+G+ G+LGHGD R+ P +VEALK K +
Sbjct: 639 AKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKSIVRA 698
Query: 409 ACGTNFTAAI 418
CG F+ +
Sbjct: 699 CCGDGFSVFV 708
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEG 346
L P + A ++ V H + VA+ + VYT G GQLG+ G+ P VE
Sbjct: 632 LTPIELPAKIKIRQVAVGLEHMVVVAMERA--VYTWGEGSKGQLGHGDLLGRSKPEMVEA 689
Query: 347 KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK 406
KS V CG ++ V T G G+NG LGHGD + P L+E L V+
Sbjct: 690 LKGKSIVR-ACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVR 748
Query: 407 SIACGTNFTAAI 418
+I+CG + A+
Sbjct: 749 AISCGPHHVVAV 760
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 159/336 (47%), Gaps = 22/336 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+++ACG H ALV + G +F++G G+LG P + L +++VACG
Sbjct: 38 AKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGR 97
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT T SG LYT+ G G LG + S P +V E +++ G H+
Sbjct: 98 IHTIVATESGCLYTF--GANGDGQLGVEDIPSSNCPVKVE--CEPRQYKALAAGADHSVA 153
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T G+L+ +G G+ G LG GD S P + + + + ACG +HTA V +V
Sbjct: 154 LTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDN--KVISVACGYYHTAFVTDV---- 207
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G++FT+G+GD G+LG G K V + E VACG S TV LT
Sbjct: 208 --------GEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPE-KAKSVACGGSHTVVLTEC 258
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
G VYT G GQLG+ V K V +IA G H A++T K ++YT+G
Sbjct: 259 GKVYTFGEGGNGQLGHKNKYFYCETPVWLNF-KHKVTQIAAGENHTALVTEKGQLYTFGD 317
Query: 378 GANGRLG--HGDTDDRNSPSLVEALKDKQVKSIACG 411
G + +LG H ++ P + V ++CG
Sbjct: 318 GRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCG 353
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 152/321 (47%), Gaps = 40/321 (12%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACG 136
V+ +ACG H + + G ++++G G+LG + S K+ + +A G
Sbjct: 90 VKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKV--ECEPRQYKALAAG 147
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A+T G+LY WG G+ G LG G+ P ++ V S++CG +HTA
Sbjct: 148 ADHSVALTDDGELYVWGGGSE--GQLGLGDIDDKSTPTLLS---TDNKVISVACGYYHTA 202
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
VT G++FTFG+G G LG G D P++V + ++V ACG HT + E
Sbjct: 203 FVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSV--ACGGSHTVVLTEC-- 258
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
GK++T+G+G G+LGH +K T V + ++A G + T +T
Sbjct: 259 ----------GKVYTFGEGGNGQLGHKNKYF-YCETPVWLNFKHKVTQIAAGENHTALVT 307
Query: 316 TSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
G +YT G + +LG ++ P R + + SK V +++CG H+ VL
Sbjct: 308 EKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSK-RFSKFIVTQVSCGGCHMIVL------ 360
Query: 373 YTWGKGANGRLGHGDTDDRNS 393
A RL +G+ D +S
Sbjct: 361 ------AYPRLQNGEVDSTSS 375
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 136/317 (42%), Gaps = 60/317 (18%)
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+ SG ++T+G + L WV G S++CG HTA+VT +G
Sbjct: 9 IPESGAIFTFGKSRFGDNLPN-----KFWV--------RGDKAKSVACGDEHTALVTESG 55
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE---------- 252
+LFTFG +G LG + K + P V+ LK + ACG HT E
Sbjct: 56 RLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGAN 115
Query: 253 ----VMVGNSSSSNC-------------------------SSGKLFTWGDGDKGRLGHGD 283
+ V + SSNC G+L+ WG G +G+LG GD
Sbjct: 116 GDGQLGVEDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGD 175
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK--LP 341
+ K PT ++ + VACG+ T +T G V+T G G+LG GK P
Sbjct: 176 IDDKSTPTLLS--TDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAP 233
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
+V + +ACG H VLT +VYT+G+G NG+LGH + + K
Sbjct: 234 KKVN---IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFK 290
Query: 402 DKQVKSIACGTNFTAAI 418
K V IA G N TA +
Sbjct: 291 HK-VTQIAAGENHTALV 306
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 23/239 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++++WG G+ +G LG G D S P L + V ++ACG H A V
Sbjct: 158 GELYVWGGGS-EGQLG---------LGDIDDKSTPTLLSTDN--KVISVACGYYHTAFVT 205
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEVF++GE GG+LG G D + PK ++ + VACG HT +T G +YT
Sbjct: 206 DVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKA--KSVACGGSHTVVLTECGKVYT 263
Query: 152 WGDGTYNFGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+G+G G LGH N+ + P +N + V+ I+ G HTA+VT GQL+TFGDG
Sbjct: 264 FGEG--GNGQLGHKNKYFYCETPVWLNFKHK---VTQIAAGENHTALVTEKGQLYTFGDG 318
Query: 211 TFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
LG H + P+ + + +CG H + + N + SS +
Sbjct: 319 RHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCGGCHMIVLAYPRLQNGEVDSTSSNE 377
>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 485
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 148/314 (47%), Gaps = 23/314 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACG 136
V +++ HAA V + GEVF+ G+ S GH + P+L+++L + + VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
T +T G +YT G T+ G LGHG+ PK + V I+ GP +
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTH--GQLGHGDTQDRPTPKMIEVLSS---VVQIAAGPSYIL 279
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEVM 254
VT G +++FG G LGHG++ PR ++ KG+ VR + G H A+
Sbjct: 280 SVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALD--- 336
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
S+G ++TWG G G LGHGD+ K P + +L +V T L
Sbjct: 337 ---------SNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVL 387
Query: 315 TTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
SG VY GS +G LG +D L R+ L V +I+ G YH V+TS+ +
Sbjct: 388 VDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQ 447
Query: 372 VYTWGKGANGRLGH 385
++ +G +LGH
Sbjct: 448 IFGFGDNERAQLGH 461
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 140/286 (48%), Gaps = 25/286 (8%)
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHV 185
NM I G+YHT ++ S +Y+ G G G+LG G+E + V R++ P V
Sbjct: 113 NMQI---TTGKYHTLLISNS-SVYSCGSGLC--GVLGQGSETTQCVAFTRIDFPPLA-RV 165
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGV 244
+S H A V +G++FT GD + GH D + + PR VESLKG+ + A G+
Sbjct: 166 VHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGL 225
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
T + G ++T G G+LGHGD + + P + L + ++
Sbjct: 226 NFTVFLTR------------KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL--SSVVQI 271
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS--FVEEIACGSYH 362
A G S +++T +G VY+ GS LG+ + +L R K + + ++ G H
Sbjct: 272 AAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEH 331
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
L S VYTWGKG G LGHGD ++ +P L+ +LK++ V +
Sbjct: 332 AVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +ES + + +A G + ++G V++ G + G+LGHG D PK+I+ LS
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS 266
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHV 185
++ +A G + +VT +G +Y++G G NF LGHG + P+ + +GIH+
Sbjct: 267 --SVVQIAAGPSYILSVTENGTVYSFGSGA-NF-CLGHGEQHDELQPRAIQKFRRKGIHI 322
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+S G H + S G ++T+G G G LGHGD + P + SLK V+
Sbjct: 323 VRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKR 382
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK---LVPTCVAALVEPNFC 302
T +V+ SG ++ +G G LG D+ L P + L +
Sbjct: 383 KTFVLVD------------SGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLRTHHVS 430
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
+++ G TV +T+ G ++ G QLG+
Sbjct: 431 QISTGLYHTVVITSRGQIFGFGDNERAQLGH 461
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 22/238 (9%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D PK +E V+ V IA G + V + G V+S+G + LGHG D L
Sbjct: 251 GDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQ 308
Query: 119 PKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P+ I I +V + G+ H A+ +G +YTWG G G LGHG+E+ P+ +
Sbjct: 309 PRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC--GALGHGDEIEKTTPELL 366
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLK 233
L+ V + T V+ +G ++ FG FG LG DR+ V PR +++L+
Sbjct: 367 T-SLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSDKVLKPRILDTLR 425
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ + G++HT + S G++F +GD ++ +LGH + L PT
Sbjct: 426 THHVSQISTGLYHTVVIT------------SRGQIFGFGDNERAQLGHDTLRSCLEPT 471
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 22/340 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
G++ L+ V+S G G LG G ++ + ID + V+ H V
Sbjct: 119 GKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFV 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG+++T GD + + GH + R+ L+GI ++ G T +T G
Sbjct: 179 MQSGEVFTCGDNSSS--CCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGH 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T G T G LGHGD + P+ +E L + V+ A G + +V E
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGPSYILSVTE----------- 283
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGHSLTVALTTSGHVY 321
+G ++++G G LGHG++ +L P + + RV+ G VAL ++G+VY
Sbjct: 284 -NGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVY 342
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
T G G LG+ K + L V ++ VL VY +G G
Sbjct: 343 TWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFG 402
Query: 382 RLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG D +D P +++ L+ V I+ G T I
Sbjct: 403 SLGFLDRRVSDKVLKPRILDTLRTHHVSQISTGLYHTVVI 442
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+A++ + + ++ G HA ++ G V++WG+ G LGHG + +
Sbjct: 301 GEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEK 360
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSHWVPK- 174
P+L+ +L N + V + T + SG +Y G G+ FG LG VS V K
Sbjct: 361 TTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVY--GFGSMGFGSLGFLDRRVSDKVLKP 418
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
R+ L HVS IS G +HT V+TS GQ+F FGD LGH +S P E+
Sbjct: 419 RILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTLRSCLEPTEI 473
>gi|255646519|gb|ACU23737.1| unknown [Glycine max]
Length = 485
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 150/314 (47%), Gaps = 23/314 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACG 136
V +++ HAA V + GEVF+ G+ S GH + P+L+++L + + VA G
Sbjct: 165 VVHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
T +T G +YT G T+ G LGHG+ PK + V I+ GP +
Sbjct: 225 LNFTVFLTRKGHVYTCGTNTH--GQLGHGDTQDRPTPKMIEVLSS---VVQIAAGPSYIL 279
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEVM 254
VT G +++FG G LGHG++ PR ++ KG+ VR + G H A+
Sbjct: 280 SVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALD--- 336
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
S+G ++TWG G G LGHGD+ K P + +L +V T L
Sbjct: 337 ---------SNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVL 387
Query: 315 TTSGHVYTMGSPVYGQLG--NPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
SG VY GS +G LG + + GK L R+ L V +I+ G YH V+TS+ +
Sbjct: 388 VDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQ 447
Query: 372 VYTWGKGANGRLGH 385
++ +G +LGH
Sbjct: 448 IFGFGDNERAQLGH 461
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 140/286 (48%), Gaps = 25/286 (8%)
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHV 185
NM I G+YHT ++ S +Y+ G G G+LG G+E + V R++ P V
Sbjct: 113 NMQI---TTGKYHTLLISNS-SVYSCGSGLC--GVLGQGSETTQCVAFTRIDFPPLA-RV 165
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGV 244
+S H A V +G++FT GD + GH D + + PR VESLKG+ + A G+
Sbjct: 166 VHVSASFNHAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFKPRLVESLKGIPCKQVAAGL 225
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
T + G ++T G G+LGHGD + + P + L + ++
Sbjct: 226 NFTVFLTR------------KGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL--SSVVQI 271
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS--FVEEIACGSYH 362
A G S +++T +G VY+ GS LG+ + +L R K + + ++ G H
Sbjct: 272 AAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEH 331
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
L S VYTWGKG G LGHGD ++ +P L+ +LK++ V +
Sbjct: 332 AVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQV 377
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 129/271 (47%), Gaps = 20/271 (7%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +ES + + +A G + ++G V++ G + G+LGHG D PK+I+ LS
Sbjct: 207 PRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLS 266
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHV 185
++ +A G + +VT +G +Y++G G NF LGHG + P+ + +GIH+
Sbjct: 267 --SVVQIAAGPSYILSVTENGTVYSFGSGA-NF-CLGHGEQHDELQPRAIQKFRRKGIHI 322
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
+S G H + S G ++T+G G G LGHGD + P + SLK V+
Sbjct: 323 VRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKR 382
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK---LVPTCVAALVEPNFC 302
T +V+ SG ++ +G G LG D+ L P + L +
Sbjct: 383 KTFVLVD------------SGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLRTHHVS 430
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
+++ G TV +T+ G ++ G QLG+
Sbjct: 431 QISTGLYHTVVITSRGQIFGFGDNERAQLGH 461
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 113/238 (47%), Gaps = 22/238 (9%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D PK +E V+ V IA G + V + G V+S+G + LGHG D L
Sbjct: 251 GDTQDRPTPKMIE--VLSSVVQIAAGPSYILSVTENGTVYSFGSGANFCLGHGEQHDELQ 308
Query: 119 PKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
P+ I I +V + G+ H A+ +G +YTWG G G LGHG+E+ P+ +
Sbjct: 309 PRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYC--GALGHGDEIEKTTPELL 366
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLK 233
L+ V + T V+ +G ++ FG FG LG DR+ V PR +++L+
Sbjct: 367 T-SLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLDRRVSGKVLKPRILDTLR 425
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ + G++HT + S G++F +GD ++ +LGH + L PT
Sbjct: 426 THHVSQISTGLYHTVVIT------------SRGQIFGFGDNERAQLGHDILRSCLEPT 471
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 142/340 (41%), Gaps = 22/340 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
G++ L+ V+S G G LG G ++ + ID + V+ H V
Sbjct: 119 GKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFV 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG+++T GD + + GH + R+ L+GI ++ G T +T G
Sbjct: 179 MQSGEVFTCGDNSSS--CCGHRDTTRPIFKPRLVESLKGIPCKQVAAGLNFTVFLTRKGH 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T G T G LGHGD + P+ +E L + V+ A G + +V E
Sbjct: 237 VYTCGTNTHGQLGHGDTQDRPTPKMIEVLSSV--VQIAAGPSYILSVTE----------- 283
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGHSLTVALTTSGHVY 321
+G ++++G G LGHG++ +L P + + RV+ G VAL ++G+VY
Sbjct: 284 -NGTVYSFGSGANFCLGHGEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVY 342
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
T G G LG+ K + L V ++ VL VY +G G
Sbjct: 343 TWGKGYCGALGHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFG 402
Query: 382 RLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG D + P +++ L+ V I+ G T I
Sbjct: 403 SLGFLDRRVSGKVLKPRILDTLRTHHVSQISTGLYHTVVI 442
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 90/175 (51%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+A++ + + ++ G HA ++ G V++WG+ G LGHG + +
Sbjct: 301 GEQHDELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGALGHGDEIEK 360
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 174
P+L+ +L N + V + T + SG +Y G G+ FG LG + VS V K
Sbjct: 361 TTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVY--GFGSMGFGSLGFLDRRVSGKVLKP 418
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
R+ L HVS IS G +HT V+TS GQ+F FGD LGH +S P E+
Sbjct: 419 RILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDILRSCLEPTEI 473
>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 150/315 (47%), Gaps = 22/315 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V NI+ HAA V + GEVF+ G+ S GHG V + P I AL ++ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHT 195
T +T G +YT G T+ G LGHG+ + PK V EG+ V ++ G +T
Sbjct: 217 LSFTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYT 273
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEV 253
VT G +++FG T LGHGD+ PR ++S K + VR + G H A+ +
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G ++TWG G G LGHGD+ K P +++L +V T
Sbjct: 334 ------------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFV 381
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
LT G V+ G +G LG P +D + RV L +V +I+ G YH +T++
Sbjct: 382 LTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRG 441
Query: 371 EVYTWGKGANGRLGH 385
V+ +G +LG
Sbjct: 442 IVFGFGDNERAQLGQ 456
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 134/277 (48%), Gaps = 23/277 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 191
VA G YHT V D + G+ G+LGHG + + RV P V +IS
Sbjct: 108 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS-RVVNISAS 163
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAV 250
H A VT G++FT GD + GHG+ +++ P E+++LKG+ + A G+ T +
Sbjct: 164 HNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVIL 223
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGH 308
+ G+++T G G+LGHGD + P V + P +VA G
Sbjct: 224 T------------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAP-VVQVAAGA 270
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG-KLSKSFVEEIACGSYHVAVL 366
S T A+T G VY+ GS LG+ Q D P ++ K V ++ G H L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
+ VYTWG+G G LGHGD +D+ SP L+ +LK +
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQ 367
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 155/350 (44%), Gaps = 39/350 (11%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVD-------SDVLHPKLIDALSNMNIELVACGE 137
GR+ L+ V+S G G LGHG D S V P L ++ ++
Sbjct: 111 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVN------ISASH 164
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLL-GHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWH 194
H VT G+++T GD N L GHG EV + P + L+GI ++ G
Sbjct: 165 NHAAFVTELGEVFTCGD---NSSLCCGHG-EVGRTIFRPTEIKA-LKGISCKQVATGLSF 219
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR-TVRAACGVWHTAAVVEV 253
T ++T+ GQ++T G T G LGHGD + P+ VE +GL V+ A G +T AV +
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD- 278
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLT 311
G ++++G LGHGD+ +L P + + N RV+ G
Sbjct: 279 -----------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 327
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
VAL G+VYT G G LG+ + K + L ++ VLT +
Sbjct: 328 VALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGS 387
Query: 372 VYTWGKGANGRLG---HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+ +G G LG G +D P ++++L+D V I+ G T A+
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 148/335 (44%), Gaps = 40/335 (11%)
Query: 32 LGDVFIWGEGT----GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
LG+VF G+ + G G +G + R P +++ + + +A G
Sbjct: 173 LGEVFTCGDNSSLCCGHGEVGRTIFR-------------PTEIKALKGISCKQVATGLSF 219
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACGEYHTCAVTLS 146
++ G+V++ G + G+LGHG D PK+++ + + VA G +T AVT
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDD 279
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLF 205
G +Y++G T NF LGHG++ P+ + IHV +S G H + + G ++
Sbjct: 280 GTVYSFGSCT-NF-CLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVY 337
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
T+G G G LGHGD + P + SLK V+ T + +
Sbjct: 338 TWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTD------------E 385
Query: 266 GKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
G +F +G G LG D+ + + P + +L + +++ G TVA+T G V+
Sbjct: 386 GSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFG 445
Query: 323 MGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEI 356
G QLG G L P + + + +EEI
Sbjct: 446 FGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEI 477
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 20/233 (8%)
Query: 183 IHVSS----ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRT 237
+H SS ++ G +HT +V + +++ G GVLGHG D + V R
Sbjct: 99 VHTSSGNMQVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRV 157
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAAL 296
V + H A V E+ G++FT GD GHG+ + PT + AL
Sbjct: 158 VNISASHNHAAFVTEL------------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKAL 205
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEE 355
+ +VA G S TV LTT G VYT GS +GQLG+ D P VE + V +
Sbjct: 206 KGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQ 265
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+A G+ + +T VY++G N LGHGD D P +++ K + + +
Sbjct: 266 VAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/357 (30%), Positives = 170/357 (47%), Gaps = 24/357 (6%)
Query: 55 GSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS 114
G+C KM ++ A + + +++ H+ + +GE +WG RLGHG S
Sbjct: 192 GNCTENKMVPTMIAATRDVLFRKIDSLST---HSIAITAKGEAMAWGNGDKYRLGHGSSS 248
Query: 115 DVLHPKLIDALS-NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
P+ I+ LS + +ACG HT A+ SG+LY WG+G+ G LG G+ P
Sbjct: 249 KEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGELYAWGNGSN--GRLGLGDTNDRSSP 306
Query: 174 KRVNGP-LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
R NG + + I CG H+ ++ G+ + +G G GHG +E+ES
Sbjct: 307 TRSNGASIAPVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESF 366
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR--------LGHGDK 284
+ V + A E + ++S G++++ G G K LGHGD
Sbjct: 367 RDTEEGEEEEFVVYAAGGWEHTLFCTAS-----GRVYSCGCGYKDSRRAGIPPVLGHGDC 421
Query: 285 EAKLVPTCVAAL--VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLP 341
+ +L PT V AL +VACG ++A+T +G VYT GS G+LG+ + +P
Sbjct: 422 DRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIP 481
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
V K V++ G H LT E++T G+G +GRLGHGD+ R P+ +E
Sbjct: 482 TLVRCMDGKK-VKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIE 537
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 154/354 (43%), Gaps = 44/354 (12%)
Query: 95 GEVFSWGEESGGRLGHGVDSDV-----------LHPKLIDALSNMNIELVACGEYHTCAV 143
G + S+G+ G+LGHG S V + P +I A ++ + H+ A+
Sbjct: 166 GYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAI 225
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G+ WG+G LGHG+ + P+ + V ++CG HT + +G+
Sbjct: 226 TAKGEAMAWGNGDKY--RLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGE 283
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVE--SLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ +G+G+ G LG GD S P S+ +R CG H+ +
Sbjct: 284 LYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFCGASHSLGL----------- 332
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-------FCRVACGHSLTVAL 314
G+ + WG ++G+ GHG + + + + A G T+
Sbjct: 333 -SWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFC 391
Query: 315 TTSGHVYTMG--------SPVYGQLGNPQADGKL-PNRVEG-KLSKSFVEEIACGSYHVA 364
T SG VY+ G + + LG+ D +L P V+ + V ++ACG H
Sbjct: 392 TASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSL 451
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+T+ VYTWG GANG+LGHGD + + P+LV + K+VK G T +
Sbjct: 452 AVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFL 505
>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
Length = 484
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 150/315 (47%), Gaps = 22/315 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V NI+ HAA V + GEVF+ G+ S GHG V + P I AL ++ + VA G
Sbjct: 157 VVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATG 216
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHT 195
T +T G +YT G T+ G LGHG+ + PK V EG+ V ++ G +T
Sbjct: 217 LSFTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYT 273
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEV 253
VT G +++FG T LGHGD+ PR ++S K + VR + G H A+ +
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G ++TWG G G LGHGD+ K P +++L +V T
Sbjct: 334 ------------GYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFV 381
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
LT G V+ G +G LG P +D + RV L +V +I+ G YH +T++
Sbjct: 382 LTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRG 441
Query: 371 EVYTWGKGANGRLGH 385
V+ +G +LG
Sbjct: 442 IVFGFGDNERAQLGQ 456
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 136/284 (47%), Gaps = 24/284 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 191
VA G YHT V D + G+ G+LGHG + + RV P V +IS
Sbjct: 108 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS-RVVNISAS 163
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAV 250
H A VT G++FT GD + GHG+ +++ P E+++LKG+ + A G+ T +
Sbjct: 164 HNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVIL 223
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGH 308
+ G+++T G G+LGHGD + P V + P +VA G
Sbjct: 224 T------------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAP-VVQVAAGA 270
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG-KLSKSFVEEIACGSYHVAVL 366
S T A+T G VY+ GS LG+ Q D P ++ K V ++ G H L
Sbjct: 271 SYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVAL 330
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
+ VYTWG+G G LGHGD +D+ SP L+ +LK QV C
Sbjct: 331 DALGYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 155/350 (44%), Gaps = 39/350 (11%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVD-------SDVLHPKLIDALSNMNIELVACGE 137
GR+ L+ V+S G G LGHG D S V P L ++ ++
Sbjct: 111 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVN------ISASH 164
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLL-GHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWH 194
H VT G+++T GD N L GHG EV + P + L+GI ++ G
Sbjct: 165 NHAAFVTELGEVFTCGD---NSSLCCGHG-EVGRTIFRPTEIKA-LKGISCKQVATGLSF 219
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR-TVRAACGVWHTAAVVEV 253
T ++T+ GQ++T G T G LGHGD + P+ VE +GL V+ A G +T AV +
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTD- 278
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLT 311
G ++++G LGHGD+ +L P + + N RV+ G
Sbjct: 279 -----------DGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHA 327
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
VAL G+VYT G G LG+ + K + L ++ VLT +
Sbjct: 328 VALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGS 387
Query: 372 VYTWGKGANGRLG---HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V+ +G G LG G +D P ++++L+D V I+ G T A+
Sbjct: 388 VFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAV 437
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 148/335 (44%), Gaps = 40/335 (11%)
Query: 32 LGDVFIWGEGT----GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
LG+VF G+ + G G +G + R P +++ + + +A G
Sbjct: 173 LGEVFTCGDNSSLCCGHGEVGRTIFR-------------PTEIKALKGISCKQVATGLSF 219
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACGEYHTCAVTLS 146
++ G+V++ G + G+LGHG D PK+++ + + VA G +T AVT
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDD 279
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLF 205
G +Y++G T NF LGHG++ P+ + IHV +S G H + + G ++
Sbjct: 280 GTVYSFGSCT-NF-CLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVY 337
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
T+G G G LGHGD + P + SLK V+ T + +
Sbjct: 338 TWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTD------------E 385
Query: 266 GKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
G +F +G G LG D+ + + P + +L + +++ G TVA+T G V+
Sbjct: 386 GSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVFG 445
Query: 323 MGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEI 356
G QLG G L P + + + +EEI
Sbjct: 446 FGDNERAQLGQEYIRGCLKPTEI---MFQKSMEEI 477
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 111/245 (45%), Gaps = 20/245 (8%)
Query: 183 IHVSS----ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRT 237
+H SS ++ G +HT +V + +++ G GVLGHG D + V R
Sbjct: 99 VHTSSGNMQVATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRV 157
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAAL 296
V + H A V E+ G++FT GD GHG+ + PT + AL
Sbjct: 158 VNISASHNHAAFVTEL------------GEVFTCGDNSSLCCGHGEVGRTIFRPTEIKAL 205
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEE 355
+ +VA G S TV LTT G VYT GS +GQLG+ D P VE + V +
Sbjct: 206 KGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQ 265
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
+A G+ + +T VY++G N LGHGD D P +++ K + + +
Sbjct: 266 VAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDE 325
Query: 416 AAICL 420
A+ L
Sbjct: 326 HAVAL 330
>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
familiaris]
Length = 1015
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 30/350 (8%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
++++ A G RH+ L+ G+V S G+ G+LG K I AL ++++LV+C
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSC 82
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ H+ AV G ++ WG G+ G LG G + ++ +P ++ L I + +SCG +H
Sbjct: 83 GKEHSLAVCHKGRVFAWGAGSE--GQLGTGEFKETNLIPMKIKT-LNDIKIKQVSCGHYH 139
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+ ++ GQ+F++G + G LG G + S + P+ V SL G+ + A G H+ A+
Sbjct: 140 SLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL--- 196
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLG-HGDKEA--KLVPTCVAALVEPNFCRVACGHSL 310
SG F WG + G+L H + + P ++AL ++CG+
Sbjct: 197 ---------SLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEH 247
Query: 311 TVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTS 368
TV LT +G V+T G YGQLG+ P A+ P VEG V +I CGSYH +A + +
Sbjct: 248 TVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYHTLAYVYT 305
Query: 369 KTEVYTWGKGANGRLG----HGDTDDRNSPSLVEA--LKDKQVKSIACGT 412
+V ++G+ + T++ + L+ A L D QVK I GT
Sbjct: 306 TGKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAGT 355
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 147/304 (48%), Gaps = 33/304 (10%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L + + A GE H+ + +G +++ GD G LG KR+ LE +H
Sbjct: 20 LGGVELRQAASGERHSLLLLSNGQVHSCGDN--GRGQLGQRGAPCSAQLKRIRA-LETLH 76
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACG 243
V +SCG H+ V G++F +G G+ G LG G+ K + IP ++++L ++ + +CG
Sbjct: 77 VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIKIKQVSCG 136
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFC 302
+H+ A+ E G++F+WG G+LG G K ++ P V +L
Sbjct: 137 HYHSLALSE------------GGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLA 184
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF---------V 353
+VA G + + AL+ SG + G GQL + N V G+ K + V
Sbjct: 185 QVAAGGAHSFALSLSGTSFGWGRNNAGQLALHK------NNVSGQSYKPYSISALKNLGV 238
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
I+CG H VLT +V+T+G G+LGH T +++ P LVE + D V I CG+
Sbjct: 239 IYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI-DGLVSQIDCGSY 297
Query: 414 FTAA 417
T A
Sbjct: 298 HTLA 301
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 128/251 (50%), Gaps = 22/251 (8%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K +
Sbjct: 71 ALETLHVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGTG--------EFKETN 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+P +++ + ++ ++CG H+ +++ G+VFSWG S G+LG G P+ +
Sbjct: 117 LIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG-HGNEVS--HWVPKRVNGPL 180
+L + + VA G H+ A++LSG + WG N G L H N VS + P ++ L
Sbjct: 177 SLDGIPLAQVAAGGAHSFALSLSGTSFGWGRN--NAGQLALHKNNVSGQSYKPYSISA-L 233
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ + V ISCG HT V+T G++FTFGD T+G LGH S P+ VE + GL + +
Sbjct: 234 KNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS-QI 292
Query: 241 ACGVWHTAAVV 251
CG +HT A V
Sbjct: 293 DCGSYHTLAYV 303
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 29/265 (10%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDALS 126
+ALE+ L V ++CG H+ V +G VF+WG S G+LG G + L P I L+
Sbjct: 70 RALET---LHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN 126
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIHV 185
++ I+ V+CG YH+ A++ G +++WG + G LG G + S P+RV L+GI +
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSD--GQLGLGKKFPSQASPQRVRS-LDGIPL 183
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKS--VSIPREVESLKGLRTVRAAC 242
+ ++ G H+ ++ +G F +G G L H + S P + +LK L + +C
Sbjct: 184 AQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISC 243
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G HT + + +GK+FT+GD G+LGH K P V ++
Sbjct: 244 GYEHTVVLTQ------------NGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG-IDGLVS 290
Query: 303 RVACGHSLTVALTTSGHVYTMGSPV 327
++ CG T+A +VYT G V
Sbjct: 291 QIDCGSYHTLA-----YVYTTGKVV 310
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 10/139 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG G L N V S P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLSGTSFGWGRNNA-GQLALHKNNVSG------QSYKPYSISALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H ++ + G+VF++G+ + G+LGH ++ P+L++ + + + + C
Sbjct: 236 LGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWG 153
G YHT A V +G + ++G
Sbjct: 295 GSYHTLAYVYTTGKVVSFG 313
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 165/350 (47%), Gaps = 44/350 (12%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL---SNMNIEL-----------------VAC 135
++FSWG + G+LG G++ ++P + L S+ + L ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G +H+ +T+ GDL+ WG G + G LG G E S +VP +N E + I+ G H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T G +FT+G G FG LGH +PR V+ + A HTAA+ E
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE--- 221
Query: 256 GNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPTCVAALVEPNFCRVACGH 308
SG+L+ WG +GD + VP+ V AL P V+CG
Sbjct: 222 ---------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVP-VASVSCGG 271
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T+ALT G ++ G+ +LG G L + +IACG YH LT
Sbjct: 272 FFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ +V +WG G +G+LG ++ P+ +EAL DK++ IA G + +AAI
Sbjct: 332 EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD++IWG+G G R+G FG + +P ++ IA GG H+ +
Sbjct: 119 GDLWIWGKGDG--------GRLG--FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALT 168
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
QG+VF+WG G LGH V + L P+ +D + I +A HT A+T SG+LY W
Sbjct: 169 HQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMW 228
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
GDG G NE VP +V + V+S+SCG + T +T GQL+ +
Sbjct: 229 GREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNW 286
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G + LG GD P V SL+G+R + ACG +H+ A+ E GK
Sbjct: 287 GANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGK 334
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ +WG G G+LG + VPT + AL + +A G S + A+T G ++ G+
Sbjct: 335 VLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAK 394
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEE-----------IACGSYHVAVLTSKT 370
QLG P LP + +F+ E I+ G+ H L S++
Sbjct: 395 DFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 444
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 192/414 (46%), Gaps = 49/414 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVG------SCFGVKMDSSLPKALESAVVLDVQN------I 81
+F WG G G LGGG+ + + + D S A ++ +D + I
Sbjct: 49 QLFSWGRGA-SGQLGGGIEEIRMYPSPVANLLFRSDQSFSLA-QTPGRIDADSSSFRIGI 106
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
+CG H+ L G+++ WG+ GGRLG G ++ V P L +I +A G H+
Sbjct: 107 SCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSV 165
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+T GD++TWG G FG LGH VP+RV+ + +S+I+ HTA +T +
Sbjct: 166 ALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITES 222
Query: 202 GQLFTFG-------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
G+L+ +G G G + +S+P +V++L + +CG + T A+ +
Sbjct: 223 GELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK-- 279
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G+L+ WG LG GD P V +L ++ACG ++AL
Sbjct: 280 ----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLAL 329
Query: 315 TTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T G V + G +GQLG+ + K+P +E K V IA G A +T E++
Sbjct: 330 TEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVF-IASGGSSSAAITDGGELW 388
Query: 374 TWGKGANGRLG-HGDTDDRNSPSLVEALKDK------QVKSIACGTNFTAAICL 420
WG + +LG G + + +P V L ++ +V SI+ G + A+CL
Sbjct: 389 MWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 440
>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
sativus]
Length = 491
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 162/338 (47%), Gaps = 22/338 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACG 136
V+ ++ HAA V + G+VF+ G+ S GH + P+L++AL+ + + V+ G
Sbjct: 165 VEQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ +T G +YT G TY G LGHGN + PK V +E V I+ GP +
Sbjct: 225 HNFSVFLTRQGHVYTCGTNTY--GQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVL 282
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES--LKGLRTVRAACGVWHTAAVVEVM 254
V + G++++FG G+ LGHG++ + PR +++ LK + V + G H A+
Sbjct: 283 AVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALD--- 339
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
S+G ++TWG G G LGHGD+ K +P + +L +V T L
Sbjct: 340 ---------SNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVL 390
Query: 315 TTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+G VY G +G LG P +D L R L V +I+ G YH V+T K +
Sbjct: 391 VDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEKGK 450
Query: 372 VYTWGKGANGRLGHGDTDDRNSPS--LVEALKDKQVKS 407
++ +G +LGH P+ + L D+ + S
Sbjct: 451 IFGFGDNERAQLGHESLRGCLEPTEIFIHDLDDESIVS 488
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 134/281 (47%), Gaps = 24/281 (8%)
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHV 185
NM I A G YHT ++ +G +Y+ G G+LGHG+E + V R+N P I+V
Sbjct: 113 NMQI---ATGRYHTLLIS-NGSVYSCGSSLC--GVLGHGSETTQCVTFTRINFP-PSIYV 165
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGV 244
+S H A VT +GQ+FT GD + GH D + PR VE+L G+ + + G
Sbjct: 166 EQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG- 224
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCR 303
N S G ++T G G+LGHG+ P V LVE + +
Sbjct: 225 -----------HNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQ 273
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV--EGKLSKSFVEEIACGSY 361
+A G S +A+ G VY+ GS LG+ + + RV +L V ++ G
Sbjct: 274 IAAGPSYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDE 333
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
H L S VYTWGKG G LGHGD D+ P + +LK+
Sbjct: 334 HAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKN 374
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 115/239 (48%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAVVL-DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G ++ PK ++ V + V IA G + V G V+S+G S LGHG +
Sbjct: 251 GNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEF 310
Query: 118 HPKLIDA--LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P+++ L N+++ V+ G+ H A+ +G +YTWG G G LGHG+E+ +P+
Sbjct: 311 QPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYC--GALGHGDEIDKTIPQP 368
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
+N + V + T V+ G ++ FG FG LG DR V PR ++SL
Sbjct: 369 LNSLKNHLAVQ-VCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ R + + G++HT V E GK+F +GD ++ +LGH L PT
Sbjct: 428 RVHRVSQISTGLYHTVVVTE------------KGKIFGFGDNERAQLGHESLRGCLEPT 474
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 19/279 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ + + ++ G + + +QG V++ G + G+LGHG + PK++ L
Sbjct: 207 PRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLV 266
Query: 127 NM-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ ++ +A G + AV G +Y++G G+ NF LGHG + + + P+ + L+ IH
Sbjct: 267 EIGSVIQIAAGPSYVLAVVNDGRVYSFGSGS-NF-CLGHGEQHNEFQPRVLQTFRLKNIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V S+S G H + S G ++T+G G G LGHGD +IP+ + SLK V+
Sbjct: 325 VVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 301
T +V+ +G ++ +G G LG D+ + L P + +L
Sbjct: 385 RKTFVLVD------------TGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRV 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
+++ G TV +T G ++ G QLG+ G L
Sbjct: 433 SQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCL 471
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 149/342 (43%), Gaps = 23/342 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
GR+ L+ G V+S G G LGHG ++ + I+ ++ +E V+ H V
Sbjct: 119 GRYHTLLISNGSVYSCGSSLCGVLGHGSETTQCVTFTRINFPPSIYVEQVSASHNHAAFV 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T SG ++T GD + +F GH + R+ L GI +S G + +T G
Sbjct: 179 TQSGQVFTCGDNS-SF-CCGHRDTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQGH 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSSSN 262
++T G T+G LGHG+ P+ V+ L + ++ A G + AVV
Sbjct: 237 VYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVLAVV----------- 285
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLTVALTTSGHV 320
+ G+++++G G LGHG++ + P + N V+ G VAL ++G V
Sbjct: 286 -NDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLV 344
Query: 321 YTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
YT G G LG+ + D +P + L ++ VL VY +G
Sbjct: 345 YTWGKGYCGALGHGDEIDKTIPQPLN-SLKNHLAVQVCARKRKTFVLVDTGIVYGFGWMG 403
Query: 380 NGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G LG D +D P +++L+ +V I+ G T +
Sbjct: 404 FGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVV 445
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 115/237 (48%), Gaps = 20/237 (8%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS--VSIPREVESLKGLRTVRAACGVW 245
I+ G +HT ++ S G +++ G GVLGHG + V+ R + + + +
Sbjct: 116 IATGRYHTLLI-SNGSVYSCGSSLCGVLGHGSETTQCVTFTR-INFPPSIYVEQVSASHN 173
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRV 304
H A V + SG++FT GD GH D ++ P V AL +V
Sbjct: 174 HAAFVTQ------------SGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQV 221
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHV 363
+ GH+ +V LT GHVYT G+ YGQLG+ +G P V+ + V +IA G +V
Sbjct: 222 SVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYV 281
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA--LKDKQVKSIACGTNFTAAI 418
+ + VY++G G+N LGHG+ + P +++ LK+ V S++ G A+
Sbjct: 282 LAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVAL 338
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + + P+ L++ + + V +++ G HA ++ G V++WG+ G LGHG + D
Sbjct: 304 GEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDK 363
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 174
P+ +++L N V + T + +G +Y G G FG LG + VS V +
Sbjct: 364 TIPQPLNSLKNHLAVQVCARKRKTFVLVDTGIVY--GFGWMGFGSLGFPDRGVSDKVLRP 421
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
R L VS IS G +HT VVT G++F FGD LGH + P E+
Sbjct: 422 RSLDSLRVHRVSQISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEI 476
>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 292
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 157/324 (48%), Gaps = 41/324 (12%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
VFSWG +GG+LGH + + P+ + AL ++A G +
Sbjct: 2 VFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGES---------------- 45
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG GNE +PKR+N + V +SCG H+AV T A + T+G+GT G LG
Sbjct: 46 ---GRLGLGNENCCNIPKRINIKKK---VVGVSCGDEHSAVFTEANTVLTWGNGTGGRLG 99
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GD S + P E + + +CG TA + +GK+FT+G G
Sbjct: 100 TGDEISRTQPVLPEH----KVAQISCGSDWTAVLT------------LAGKVFTFGVGSY 143
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQ 335
G+LGHG+ +LVP V L ++CG AL G V+T G G+LG+ +
Sbjct: 144 GKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSE 203
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSP 394
D K P V+G ++ + CG YH+ V T E+Y WG G+ G G +++ +P
Sbjct: 204 RDSKKPVLVKG-MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLTP 262
Query: 395 SLVEALKDKQVKSIACGTNFTAAI 418
LVE L+ K+V +ACG + T A+
Sbjct: 263 VLVEQLRGKRVLMVACGESHTMAL 286
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 20/241 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++CG H+A+ + V +WG +GGRLG G + P L + ++CG
Sbjct: 68 VVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQP----VLPEHKVAQISCGS 123
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
T +TL+G ++T+G G+Y G LGHGN+ + VPK V L+ V S+SCG H A
Sbjct: 124 DWTAVLTLAGKVFTFGVGSY--GKLGHGNDSNQLVPKLVE-ELDTERVVSLSCGADHMAA 180
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G +FT+G G G LGHG + P V+ + GL + CG +H
Sbjct: 181 LNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECGGYHMGVTT------ 234
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G+L+ WG G+ G G E +L P V L VACG S T+AL +
Sbjct: 235 ------LDGELYMWGWNVYGQCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTMALVS 288
Query: 317 S 317
+
Sbjct: 289 N 289
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 113/218 (51%), Gaps = 18/218 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG GTG R+G+ G ++ + P E V I+CG A++
Sbjct: 87 VLTWGNGTG--------GRLGT--GDEISRTQPVLPEHKVA----QISCGSDWTAVLTLA 132
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+VF++G S G+LGHG DS+ L PKL++ L + ++CG H A+ + GD++TWG
Sbjct: 133 GKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGC 192
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHG+E P V G + G+ ++ CG +H V T G+L+ +G +G
Sbjct: 193 G--GNGRLGHGSERDSKKPVLVKG-MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQ 249
Query: 215 LGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVV 251
G G + P VE L+G R + ACG HT A+V
Sbjct: 250 CGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTMALV 287
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+PK +E V +++CG H A +N +G+VF+WG GRLGHG + D P L+ +
Sbjct: 156 VPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGM 215
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+ + V CG YH TL G+LY WG Y G G G V + + + L G V
Sbjct: 216 NGLVALTVECGGYHMGVTTLDGELYMWGWNVY--GQCGLGLHVENQLTPVLVEQLRGKRV 273
Query: 186 SSISCGPWHTAVVTS 200
++CG HT + S
Sbjct: 274 LMVACGESHTMALVS 288
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 180/418 (43%), Gaps = 59/418 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG T DG LG L V + L ++ IACG H L
Sbjct: 83 GSVWAWGNPT-DGQLGLRLTN-DHTLAVPEPTELEAFSSVSMSTLASAIACGRAHT-LFL 139
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V+S G G+LGH P+ +DAL I +ACGE H+ A+T +G ++ W
Sbjct: 140 VDGQVYSCGSNDQGQLGHKKHRS--KPERVDALEPYTITQIACGETHSLALTSNGQVFAW 197
Query: 153 GDG-TYNFGLLGHGNEVSHWVPKRVNGP-------------------------------- 179
GD GL +E S R + P
Sbjct: 198 GDNKASQLGLTP--SESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRA 255
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L G + I CG + V++ G +F +GD T G L + K+V +P V+ L G+ +
Sbjct: 256 LTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQ 315
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A G HT A+ +G++++WG+ G+LG GD +P+ + L E
Sbjct: 316 LAAGGRHTLALT------------FNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTL-EH 362
Query: 300 NFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
FC +ACG +V LT +G VY+ G+ GQLG+ ++ R+ +L ++ C
Sbjct: 363 QFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLC 422
Query: 359 GSYHVAVLTSKT-EVYTWGKGANGRLGHG----DTDDRNSPSLVEALKDKQVKSIACG 411
G H V KT ++Y +G G NG+LG G +P LV L + IA G
Sbjct: 423 GRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPILRIATG 480
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 166/371 (44%), Gaps = 62/371 (16%)
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSD----VLHPKLIDALSNMNIEL----VACGEYH 139
AA G V++WG + G+LG + +D V P ++A S++++ +ACG H
Sbjct: 76 AAHAQLAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAH 135
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T + + G +Y+ G + G LGH S P+RV+ LE ++ I+CG H+ +T
Sbjct: 136 TLFL-VDGQVYSCGSN--DQGQLGHKKHRSK--PERVDA-LEPYTITQIACGETHSLALT 189
Query: 200 SAGQLFTFGDGTFGVLGHGDRKS----------------------------------VSI 225
S GQ+F +GD LG +S ++
Sbjct: 190 SNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTR 249
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
PR V +L G + V+ CG N S G +F WGD G+L + +
Sbjct: 250 PRLVRALTGHKIVQIVCG------------ANFSLVLSERGDVFAWGDNTSGQLCLRELK 297
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRV 344
VPT V L ++A G T+ALT +G VY+ G+ +GQLG A +P+R+
Sbjct: 298 TVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRL 357
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
+ L F IACG H VLT VY++G G G+LGHG + +P ++ L K
Sbjct: 358 K-TLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKS 416
Query: 405 VKSIACGTNFT 415
+ CG T
Sbjct: 417 ASQVLCGRRHT 427
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 127/269 (47%), Gaps = 18/269 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + + I CG + +++++G+VF+WG+ + G+L V P L+ L
Sbjct: 250 PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELY 309
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ I +A G HT A+T +G +Y+WG+ FG LG G+ H +P R+ LE +
Sbjct: 310 GIPIRQLAAGGRHTLALTFNGQVYSWGNN--QFGQLGVGDTAPHTIPSRLKT-LEHQFCA 366
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
I+CG H+ V+T G +++FG G G LGHG ++ PR + L G + CG H
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRH 426
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG----DKEAKLVPTCVAALVEPNFC 302
T + K++ +G G G+LG G ++ L P V L
Sbjct: 427 TIVFFP-----------KTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPIL 475
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
R+A G S + G+ +G+ QL
Sbjct: 476 RIATGASASHCFAVVGNRNHVGAAESAQL 504
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 146/343 (42%), Gaps = 56/343 (16%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG-------- 109
G K S P+ +++ + IACG H+ + G+VF+WG+ +LG
Sbjct: 155 LGHKKHRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSR 214
Query: 110 -------------------HGVDSDVL-------HPKLIDALSNMNIELVACGEYHTCAV 143
+D+ L P+L+ AL+ I + CG + +
Sbjct: 215 QPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVL 274
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+ GD++ WGD T L V VP V L GI + ++ G HT +T GQ
Sbjct: 275 SERGDVFAWGDNTSGQLCLRELKTVP--VPTLVK-ELYGIPIRQLAAGGRHTLALTFNGQ 331
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++++G+ FG LG GD +IP +++L+ ACG H+ + E
Sbjct: 332 VYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTE----------- 380
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA-LTTSGHVYT 322
+G ++++G G +G+LGHG + ++ P + L+ + +V CG T+ + +Y
Sbjct: 381 -TGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYA 439
Query: 323 MGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGS 360
G GQLG PQ P V L + + IA G+
Sbjct: 440 FGLGGNGQLGTGVGVEPQQHVLTPMLVR-VLDATPILRIATGA 481
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 60/316 (18%)
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-------VSSISCGPWHTAV 197
L+G ++ WG+ T L N+ + VP+ LE S+I+CG HT
Sbjct: 81 LAGSVWAWGNPTDGQLGLRLTNDHTLAVPEPTE--LEAFSSVSMSTLASAIACGRAHTLF 138
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ GQ+++ G G LGH +K S P V++L+ + ACG H+ A+
Sbjct: 139 LVD-GQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGETHSLALT------ 189
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT-------------------------- 291
S+G++F WGD +LG E+ P+
Sbjct: 190 ------SNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAY 243
Query: 292 --------CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPN 342
V AL ++ CG + ++ L+ G V+ G GQL + +P
Sbjct: 244 MDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPT 303
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
V+ +L + ++A G H LT +VY+WG G+LG GDT PS ++ L+
Sbjct: 304 LVK-ELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEH 362
Query: 403 KQVKSIACGTNFTAAI 418
+ IACG + + +
Sbjct: 363 QFCAHIACGEDHSVVL 378
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDVF WG+ T + C +P ++ + ++ +A GGRH +
Sbjct: 278 GDVFAWGDNTSGQL----------CLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALT 327
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V+SWG G+LG G + P + L + +ACGE H+ +T +G +Y++
Sbjct: 328 FNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSF 387
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV-VTSAGQLFTFGDGT 211
G G G LGHG + + + R+ L G S + CG HT V +++ FG G
Sbjct: 388 GAGGQ--GQLGHGT-LQNEINPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGG 444
Query: 212 FGVLGHG----DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G LG G ++ V P V L +R A G +A+ +VGN + +
Sbjct: 445 NGQLGTGVGVEPQQHVLTPMLVRVLDATPILRIATGA--SASHCFAVVGNRNHVGAAESA 502
Query: 268 LFTW 271
W
Sbjct: 503 QLPW 506
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 32/356 (8%)
Query: 35 VFIWGEGTGDGVL---GGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
+F WG T + G L+ V + +L K ES+ +Q I+ G H +
Sbjct: 1 MFCWGNATHHELCIECPGNLDLV-------IKPTLSKWKESS---HIQQISAGEFHTLYL 50
Query: 92 NKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G +++ G G+LG +S D P L+D + +ACG H+ A+ G +
Sbjct: 51 SNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPF 110
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+WG + G LG N SH K ++ L +V ++CG +HT V+T+ G L+ +G
Sbjct: 111 SWGSDS--MGQLG-SNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGA 167
Query: 210 GTFGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
++G G G+R + + P+ + S+ G+ ACG HT A+ + SG +
Sbjct: 168 NSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQ------------SGAV 215
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F WG G+LG D+E++ PT + L C ++CG T LT G V+T G+ Y
Sbjct: 216 FGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEY 275
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
GQ G+ +L R +L S V ++ACG H+ + + G GA G+LG
Sbjct: 276 GQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGE-RILACGYGARGQLG 330
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 131/256 (51%), Gaps = 16/256 (6%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL-HPKLIDALSNMNIELVACGEYH 139
IACG +H+ +++ G+ FSWG +S G+LG + S PK+I L+ N+ VACG YH
Sbjct: 93 IACGLQHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYH 152
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T +T +GDLY WG +Y G G GN + + + GI ++ I+CG HT ++
Sbjct: 153 TVVLTNNGDLYAWGANSY--GQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALS 210
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+G +F +G + G LG DR+S P +++L+ ++ +CG TA +
Sbjct: 211 QSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLT-------- 262
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G +FT G G+ G+ GHG+ + +LVP V L+ +VACG +
Sbjct: 263 ----LDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHMLC-RVGER 317
Query: 320 VYTMGSPVYGQLGNPQ 335
+ G GQLG P
Sbjct: 318 ILACGYGARGQLGCPH 333
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
++ WG+ T++ + + + ++ E H+ IS G +HT +++ G L+T G
Sbjct: 1 MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60
Query: 209 DGTFGVLG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G LG + + P V++ KG ACG+ H+ A+ E G+
Sbjct: 61 SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDE------------WGQ 108
Query: 268 LFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
F+WG G+LG A+ P + L N +VACG TV LT +G +Y G+
Sbjct: 109 PFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGAN 168
Query: 327 VYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YGQ LGN P + L + IACGS H L+ V+ WGK ++G+LG
Sbjct: 169 SYGQCGLGNRSNKETTPQALSSILGIP-IALIACGSNHTFALSQSGAVFGWGKNSHGQLG 227
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
D + R P+ ++ L++ +V I+CG +FTA + L
Sbjct: 228 LQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTL 263
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 145/324 (44%), Gaps = 27/324 (8%)
Query: 97 VFSWGEESGGRLG---HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+F WG + L G V+ P L + +I+ ++ GE+HT ++ +G LYT G
Sbjct: 1 MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG + + +G +S+I+CG H+ + GQ F++G + G
Sbjct: 61 SN--EVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMG 118
Query: 214 VLG-----HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
LG H K P+ +++L ++ ACG +HT + ++G L
Sbjct: 119 QLGSNLGSHAQDK----PKIIKTLATKNVIQVACGSYHTVVLT------------NNGDL 162
Query: 269 FTWGDGDKGRLGHGDKEAK-LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ WG G+ G G++ K P +++++ +ACG + T AL+ SG V+ G
Sbjct: 163 YAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNS 222
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
+GQLG + + L V I+CG A LT V+T G G G+ GHG+
Sbjct: 223 HGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGN 282
Query: 388 TDDRNSPSLVEALKDKQVKSIACG 411
T D P V L V +ACG
Sbjct: 283 TKDELVPRKVMELMGSTVTQVACG 306
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 90/185 (48%), Gaps = 15/185 (8%)
Query: 33 GDVFIWGEGT-GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
GD++ WG + G LG N+ + P+AL S + + + IACG H +
Sbjct: 160 GDLYAWGANSYGQCGLGNRSNK----------ETTPQALSSILGIPIALIACGSNHTFAL 209
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
++ G VF WG+ S G+LG +P + L N+ + ++CGE T +TL G ++T
Sbjct: 210 SQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFT 269
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G G Y G GHGN VP++V L G V+ ++CG H + ++ G G
Sbjct: 270 CGAGEY--GQTGHGNTKDELVPRKV-MELMGSTVTQVACGRRH-MLCRVGERILACGYGA 325
Query: 212 FGVLG 216
G LG
Sbjct: 326 RGQLG 330
>gi|198435791|ref|XP_002121699.1| PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family
member (nekl-1) [Ciona intestinalis]
Length = 1265
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 155/349 (44%), Gaps = 42/349 (12%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVL--------HPKLIDAL-SNMNIELVACGEYHTCAV 143
++ + + ES R H VL H I+ L S + I VA G H V
Sbjct: 537 ERNHMITTSRESNDRRNHETTRSVLYLYNTFDMHLTPIEGLPSKVKIRQVAVGTNHVVVV 596
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T +Y+WG+ Y G LGHG+ P + L+G +++ SCG + VT G
Sbjct: 597 TTERVVYSWGENAY--GQLGHGHLEPVAKPHVIEA-LKGKPITTTSCGSNFSVFVTDNGI 653
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L T GDG+ G LG G+ S + P VE L + ACG H A+
Sbjct: 654 LLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDAHVVAL------------S 701
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
S G+++ WG G +GRLG G + + P VA + V CGH T+ +T G +
Sbjct: 702 SEGEIYAWGCGSQGRLGTGHDDHCIEPHRVA--INQAIRDVRCGHDGTMFITDVGTLLAC 759
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVE---------------EIACGSYHVAVLTS 368
G+ Y +LG + G + +L K+ VE ++A G +H VLT
Sbjct: 760 GNNQYNKLGLNERTGFI-MMFNNRLKKTEVECRKTPTVVKSIKGVVDVAMGRHHTTVLTE 818
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V G G++G GD R SP LV+ +KD V +ACG +TA
Sbjct: 819 SNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNTYTAV 867
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 147/313 (46%), Gaps = 27/313 (8%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ ++ +A G H +V + V+SWGE + G+LGHG V P +I+AL I +C
Sbjct: 581 VKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSC 640
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G + VT +G L T GDG+ G LG GN S P V PL + VS+++CG H
Sbjct: 641 GSNFSVFVTDNGILLTCGDGSQ--GCLGQGNLSSTTRPSMVE-PLLSVDVSTVACGDAHV 697
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV-- 253
++S G+++ +G G+ G LG G P V + +R VR CG T + +V
Sbjct: 698 VALSSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVAINQAIRDVR--CGHDGTMFITDVGT 755
Query: 254 --MVGNSSSS----NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
GN+ + N +G + + + RL + E + PT V ++ VA G
Sbjct: 756 LLACGNNQYNKLGLNERTGFIMMFNN----RLKKTEVECRKTPTVVKSI--KGVVDVAMG 809
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHV 363
T LT S V +GS GQ+G D KL R L K V +ACG+ +
Sbjct: 810 RHHTTVLTESNQVLMLGSNKEGQMGT--GDNKL--RTSPYLVKCIKDYDVMVVACGNTYT 865
Query: 364 AVLTSKTEVYTWG 376
AV TS V WG
Sbjct: 866 AVGTSNNIVLYWG 878
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 130/308 (42%), Gaps = 49/308 (15%)
Query: 36 FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG 95
+ WGE + G L V P +E+ + +CG + V G
Sbjct: 603 YSWGENAYGQLGHGHLEPVAK----------PHVIEALKGKPITTTSCGSNFSVFVTDNG 652
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+ + G+ S G LG G S P +++ L ++++ VACG+ H A++ G++Y WG G
Sbjct: 653 ILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDAHVVALSSEGEIYAWGCG 712
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIH--VSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ G LG G++ P RV I+ + + CG T +T G L G+ +
Sbjct: 713 SQ--GRLGTGHDDHCIEPHRV-----AINQAIRDVRCGHDGTMFITDVGTLLACGNNQYN 765
Query: 214 VLGHGDR-----------KSVSI-----PREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
LG +R K + P V+S+KG+ V A G HT + E
Sbjct: 766 KLGLNERTGFIMMFNNRLKKTEVECRKTPTVVKSIKGV--VDVAMGRHHTTVLTE----- 818
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
S ++ G +G++G GD + + P V + + + VACG++ T T++
Sbjct: 819 -------SNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNTYTAVGTSN 871
Query: 318 GHVYTMGS 325
V GS
Sbjct: 872 NIVLYWGS 879
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 50/75 (66%)
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
+EG SK + ++A G+ HV V+T++ VY+WG+ A G+LGHG + P ++EALK K
Sbjct: 574 IEGLPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGK 633
Query: 404 QVKSIACGTNFTAAI 418
+ + +CG+NF+ +
Sbjct: 634 PITTTSCGSNFSVFV 648
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+VA G + V +TT VY+ G YGQLG+ + V L + +CGS
Sbjct: 585 QVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSCGSNF 644
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+T + T G G+ G LG G+ PS+VE L V ++ACG A+
Sbjct: 645 SVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDAHVVAL 700
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 170/372 (45%), Gaps = 28/372 (7%)
Query: 50 GLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
GLN G G + L P ++ IA G H V + G V++WG G+L
Sbjct: 796 GLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQL 855
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
G G + L P + M++ +A G YH A G L+TWG +Y G LG G
Sbjct: 856 GDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSY--GQLGGGPLS 913
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
+P +V G ++ V++++ G +H A G L+T+G ++G LG G +P +
Sbjct: 914 YRLLPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQ 970
Query: 229 VESLKGLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
V+ GL +V A A G +H AA + G L+TWG G+LG G
Sbjct: 971 VQ---GLMSVTAMAAGGYHMAAAGQ------------DGTLWTWGLNSYGQLGGGPLSQS 1015
Query: 288 LVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG 346
L P V +A G S T+A+ G V++ G YGQLG+ A P +V+G
Sbjct: 1016 LTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQG 1075
Query: 347 KLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK 406
+ V I+ G H L V+ WG+ + G+LG G T R +P V+ L V
Sbjct: 1076 ---LTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VI 1130
Query: 407 SIACGTNFTAAI 418
+IA G+ T A+
Sbjct: 1131 AIAAGSLHTVAL 1142
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 173/372 (46%), Gaps = 30/372 (8%)
Query: 50 GLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
GLN G G + SL P ++ + V IA G H V + G V+SWG + G+L
Sbjct: 1000 GLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQL 1059
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
G G + L P + L+ + ++ G+ HT A+ G ++ WG ++ G LG G
Sbjct: 1060 GDGTTAQSLTPVQVQGLTG--VTAISAGDAHTVALRRDGTVWAWGRNSW--GQLGDGTTT 1115
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
P +V G L G V +I+ G HT + G ++ +G ++G LG G + P +
Sbjct: 1116 HRATPVQVQG-LTG--VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQ 1172
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
V+ L G+ + A G HT A+ + G ++ WG D G+LG G +L
Sbjct: 1173 VQGLTGV--IAIAAGSLHTVALRQ------------DGTVWAWGFNDLGQLGDGTTTRRL 1218
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGK 347
P V L +A G+ T A+ G +T G ++GQLG+ D P +V+G
Sbjct: 1219 TPAQVQGLT--GVTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGL 1276
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
+ V +A G H V+ V+ WG + +LG+G + DR++P VEAL S
Sbjct: 1277 ---TGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGA--FS 1331
Query: 408 IACGTNFTAAIC 419
+A G T A+
Sbjct: 1332 LAAGRFHTVAMS 1343
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 148/339 (43%), Gaps = 35/339 (10%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G H V + G V++WG G+LG G + P + +A G YHT
Sbjct: 79 AGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV----MTGATAIAAGIYHTV 134
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A + G ++TWG + G LG G + + P +V G L G V++++ G H+A +
Sbjct: 135 AASQDGTVWTWGR--NSSGQLGDGTSIQRFSPVQVQG-LTG--VTAVAAGRNHSAALGQG 189
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
G ++T+GD G LG G P +V+ L G+ + A N S +
Sbjct: 190 GTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTGVIAISA----------------NDSET 233
Query: 262 NC--SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G ++ WG+ G+LG G + P V L +A G VAL G
Sbjct: 234 VALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLT--GVTAIAAGGGFAVALRQDGT 291
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
++ GS GQLGN G P +V+G + V IA H L ++ WG
Sbjct: 292 LWAWGSNSRGQLGNGTTFGSYRPEQVQG---LTGVTAIAASGIHTVALRQDGTLWAWGNN 348
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
++G+LG G T R +P V+ L V +IA G +T A
Sbjct: 349 SSGQLGDGTTTVRFTPVQVQGLTG--VTAIAAGYLYTVA 385
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 150/342 (43%), Gaps = 29/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA G + + G V++WG+ G+LG G + L P + L+ + +A G
Sbjct: 373 VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTG--VTAIAAGY 430
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+T A G ++ WGD + LG G P V G LEGI ++I+ T
Sbjct: 431 LYTVASKQDGTVWAWGDNKRS--QLGEGAVSQRHTPGEVQG-LEGI--TAIAASNLLTVA 485
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
V G ++ +GD G LG G P +V+ L G+ V A+ +H AV +
Sbjct: 486 VRQDGTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTAVAASD--YHLVAVRQ----- 538
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G ++ WG G G+LG G + P V L +A G + TVAL
Sbjct: 539 -------DGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLT--GVTAIAAGSNHTVALRQD 589
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G YGQLG+ G L P +V G + IA G H L V+TWG
Sbjct: 590 GTVWAWGFNNYGQLGDGTTAGHLTPVQVPGV---TGAVAIAAGGSHTVALLQDGTVWTWG 646
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G T R+SP V+ L D V +IA T A+
Sbjct: 647 YNIWGQLGDGTTTHRHSPVQVQGLAD--VIAIATNNGHTVAV 686
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 151/342 (44%), Gaps = 25/342 (7%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
DV IA H V + G V++WG S G+LG G + L P + L++ L +
Sbjct: 672 DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSS 731
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ T A+ L+ WGD ++G LG G P +V G ++ V++++ G +H A
Sbjct: 732 Q--TVAMRQDRTLWAWGD--NHWGQLGDGTTTRRLTPVQVQGLMD---VTAMAAGGYHMA 784
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
G L+T+G ++G LG G +P +V+ L A G HT AV +
Sbjct: 785 AAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQ---- 840
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G ++ WG G+LG G L P V + +A G A
Sbjct: 841 --------DGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQ 892
Query: 317 SGHVYTMGSPVYGQL-GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G ++T G YGQL G P + LP +V+G + V +A G YH+A ++TW
Sbjct: 893 DGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMD---VTAMAAGGYHMAAAGQDGTLWTW 949
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G + G+LG G R P V+ L V ++A G AA
Sbjct: 950 GLNSYGQLGGGPLSYRLLPVQVQGLMS--VTAMAAGGYHMAA 989
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 155/344 (45%), Gaps = 30/344 (8%)
Query: 55 GSCFGVKMDSSLPKALESAVV---LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG 111
G+ +G D + ++L V V I+ G H + + G V++WG S G+LG G
Sbjct: 1053 GNAYGQLGDGTTAQSLTPVQVQGLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDG 1112
Query: 112 VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW 171
+ P + L+ + +A G HT A+ G ++ WG ++ G LG G
Sbjct: 1113 TTTHRATPVQVQGLTG--VIAIAAGSLHTVALRQDGTVWAWGRNSW--GQLGDGTTTHRA 1168
Query: 172 VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
P +V G L G V +I+ G HT + G ++ +G G LG G P +V+
Sbjct: 1169 TPVQVQG-LTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQG 1225
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
L G+ T+ A G +HTAAV + G +TWG G+LG G + P
Sbjct: 1226 LTGVTTI--AAGYFHTAAVRQ------------DGTAWTWGFNLWGQLGDGTFTDRATPV 1271
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSK 350
V L +A G++ TV + G V+ G+ QLGN D P +VE L+
Sbjct: 1272 QVQGLT--GVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVE-ALTG 1328
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+F +A G +H ++ + WG+ G++G G T DR +P
Sbjct: 1329 AF--SLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTP 1370
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 155/342 (45%), Gaps = 29/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +A G H+A + + G V++WG+ G+LG G + L P + L+ + ++ +
Sbjct: 173 VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLT--GVIAISAND 230
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
T A+ G ++ WG+ + G LG G + P +V G L G V++I+ G
Sbjct: 231 SETVALRQDGTVWAWGN--NSSGQLGDGTTTVRFTPVQVLG-LTG--VTAIAAGGGFAVA 285
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G L+ +G + G LG+G P +V+ L G+ + AA G+ HT A+ +
Sbjct: 286 LRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAI-AASGI-HTVALRQ----- 338
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G L+ WG+ G+LG G + P V L +A G+ TVA
Sbjct: 339 -------DGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLT--GVTAIAAGYLYTVASKQD 389
Query: 318 GHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G +GQLG+ +L P +V+G + V IA G + V+ WG
Sbjct: 390 GTVWAWGDNEWGQLGDGTTTRRLTPVQVQG---LTGVTAIAAGYLYTVASKQDGTVWAWG 446
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+LG G R++P V+ L+ + +IA T A+
Sbjct: 447 DNKRSQLGEGAVSQRHTPGEVQGLEG--ITAIAASNLLTVAV 486
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 7/125 (5%)
Query: 295 ALVEPNFCRVACGH-SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
A P +A G+ + T+A+ G V+ G+ GQLG DG R +
Sbjct: 68 AFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLG----DGTTTRRFSPVQVMTGA 123
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
IA G YH + V+TWG+ ++G+LG G + R SP V+ L V ++A G N
Sbjct: 124 TAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG--VTAVAAGRN 181
Query: 414 FTAAI 418
+AA+
Sbjct: 182 HSAAL 186
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V IA G H A V + G ++WG G+LG G +D P + L+ + +A G
Sbjct: 1229 VTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTG--VSALAAGY 1286
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGL-LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT V G ++ WG+ N G LG+G+ P +V L G S++ G +HT
Sbjct: 1287 AHTVVVGEDGTVWAWGN---NSGTQLGNGSSTDRSTPVQVE-ALTGAF--SLAAGRFHTV 1340
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
++ G + +G G +G G P V +G
Sbjct: 1341 AMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNVMVQEG 1378
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D + P ++ + V +A G H +V + G V++WG SG +LG+G +D
Sbjct: 1262 GTFTDRATPVQVQG--LTGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRST 1319
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P ++AL+ +A G +HT A +S D WG G N G +G G P VN
Sbjct: 1320 PVQVEALTGAFS--LAAGRFHTVA--MSPDGAGWGWGRNNLGQVGDGTTADR--PTPVN 1372
>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Acyrthosiphon pisum]
Length = 893
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 170/353 (48%), Gaps = 37/353 (10%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL--IDALSNMNIELVA 134
+++++ACG H V + G++++ G G+LGH D KL I + ++ + VA
Sbjct: 55 NIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGH----DGCRTKLQKIPGVESLVMTSVA 110
Query: 135 CGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
CGE H+ A+ G LYTWG D GL +E + PK V L + + ISCG
Sbjct: 111 CGEAHSMALNEWGQLYTWGSDSCGQLGL--ETDEGIQYKPKIVK-TLASMLLVQISCGYK 167
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H +T+ G+L+T+G FG LG G +VS P V SL GL ACG +H+ V
Sbjct: 168 HCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV-- 225
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
SG +F WG D G+LG + + P + + +A G +V
Sbjct: 226 ----------SKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSV 275
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTE 371
LT G V+T G+ +YGQLG+ ++ R +L S V ++ CG H L SK
Sbjct: 276 FLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGR 335
Query: 372 VYTWGKGANGRLGHGDTDDRNSP-------------SLVEALKDKQVKSIACG 411
VY++G G+ G+LG + + N+P S++E K VKSI G
Sbjct: 336 VYSFGLGSVGQLGTKSSINSNTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAG 388
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 25/269 (9%)
Query: 14 SSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
S ++S + G H + G ++ WG + G LG + G++ + K L S
Sbjct: 103 SLVMTSVACGEAHSMALNEWGQLYTWGSDSC-GQLGLETDE-----GIQYKPKIVKTLAS 156
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWG-EESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
+++ I+CG +H + GE+++WG E G +V P L+++L + I
Sbjct: 157 MLLVQ---ISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPIS 213
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+ACG YH+ V+ SG ++ WG +FG LG ++ S P ++ + + V I+ G
Sbjct: 214 FIACGGYHSFVVSKSGAVFGWGKN--DFGQLGINSQTSLSSPAQLK-TIRTVKVKYIAGG 270
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ +T G +FT G G +G LGHG + +PR+V L G + CG HT +V
Sbjct: 271 EDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 330
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
S G+++++G G G+LG
Sbjct: 331 P-----------SKGRVYSFGLGSVGQLG 348
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 231/540 (42%), Gaps = 61/540 (11%)
Query: 90 LVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSN-MNIELVACGEYHTCAVTLS 146
L+ K + G S G+LG G + +V L+++ N + I +ACG +H+ +
Sbjct: 11 LILKSMSLLCCGNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDD 70
Query: 147 GDLYTWGDGTYNFGLLGHG--------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
G +++ G+ +F LGH E HW V GIHV S++CG H +
Sbjct: 71 GSVFSCGNN--DFYQLGHDGIKRKPNLYENLHWYID-VKQSFVGIHVISVACGDAHCVAL 127
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPR--EVESLKGLRTVRAACGVWHTAAVVEVMVG 256
T+ G LF++G +G LG V+ R ++ + V+ ACG H+ A+
Sbjct: 128 TNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLAL------ 181
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+ G L WG D G+LG G +E+ + PT V L+ C++A G S ++ LT
Sbjct: 182 -----ESTDGVLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTP 236
Query: 317 SGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
SG V+ G ++GQ+G N Q D P+ V+ L V +ACG +T+ ++T+
Sbjct: 237 SGTVFGWGKNMFGQIGQNEQRDILYPSLVK-LLRTQKVIRLACGEDFSVAVTATGGLFTF 295
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK-WVSGVDQSMCSG 434
G G G+LGHG+ + P V L V +ACG T AI +K + G++ S
Sbjct: 296 GAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITENKLYAFGLNTS---- 351
Query: 435 CRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTFDT 494
+L N K ++ L + P K NK T +
Sbjct: 352 GQLGLLNVKH----------------TTSIPLPIPIEKQPRKNGDDDGGGDNK-AITVPS 394
Query: 495 DGSSHSSVSR-RGSINQGPNEFIDKDEKLDSRSRAQLTRF-SSMESFKQSEGRSKRNKKL 552
H S+S R IN+ P D +++ R +ME+F + K+
Sbjct: 395 FPVKHLSLSFVRHLINEEPEHLYDGNDRFGVTERHSCINMDEAMETFLLLSDYCTAHPKV 454
Query: 553 E---FNSSRVSPIPNGSSQWGALNISKSFNPM-----FGSSKKFFSASVPGSRIVSRATS 604
E S VS IP+ S + ++ + + F SK + + VP + +S S
Sbjct: 455 ESIMVRSVEVSLIPSLRSSLIDIEFARVYLILPWCHIFSFSKYYRNIVVPFTLCLSDQNS 514
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 167/358 (46%), Gaps = 41/358 (11%)
Query: 42 TGDGVLGGGLNRVGSCFGVKMDS--SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T DG LG G G+ ++ SL + L ++ IACG H+ ++ G VFS
Sbjct: 24 TSDGQLGLG--------GIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFS 75
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALS----------NMNIELVACGEYHTCAVTLSGDL 149
G +LGH D P L + L +++ VACG+ H A+T G L
Sbjct: 76 CGNNDFYQLGH--DGIKRKPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVALTNDGHL 133
Query: 150 YTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFT 206
++WG Y G LG N V+ R+ + ++ I+CG H+ A+ ++ G L
Sbjct: 134 FSWGSNVY--GQLGVERMNVVAKARYPRIQ-EINLANIVQIACGSNHSLALESTDGVLHA 190
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G G LG G R+S P V L G+ + A G H+ + SG
Sbjct: 191 WGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLT------------PSG 238
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+F WG G++G ++ L P+ V L R+ACG +VA+T +G ++T G+
Sbjct: 239 TVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAG 298
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YGQLG+ + +L + +L S V ++ACG H +T + ++Y +G +G+LG
Sbjct: 299 TYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFGLNTSGQLG 355
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 11/193 (5%)
Query: 44 DGVLGG-GLNRVGSCFGVKMDSSL--PKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
DGVL GLN G G+ S P + + + + +A G H+ ++ G VF W
Sbjct: 185 DGVLHAWGLNDHGQ-LGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGW 243
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFG 160
G+ G++G D+L+P L+ L + +ACGE + AVT +G L+T+G GTY G
Sbjct: 244 GKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTY--G 301
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LGHGN+ S PK+V L G V ++CG HT +T +L+ FG T G LG +
Sbjct: 302 QLGHGNQNSELFPKQV-MELMGSVVLDVACGRCHTLAITE-NKLYAFGLNTSGQLGLLNV 359
Query: 221 K---SVSIPREVE 230
K S+ +P +E
Sbjct: 360 KHTTSIPLPIPIE 372
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 167/348 (47%), Gaps = 43/348 (12%)
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
++++CGG H+A++ + G + +G + G+LG + P + AL + ++L ACG
Sbjct: 39 KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRD 98
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH---------WVPKRVNGPLEGIHVSSIS 189
HT T G +Y+ G LGH ++ ++ W P + +S
Sbjct: 99 HTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAP-----------IKMLS 147
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
G +A +T G+LF +GD + G + GD + PREV G + +CG H+A
Sbjct: 148 AGCNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVHV--GEAVIWVSCGYKHSAF 205
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACG 307
V G+L+T+G+ GRLG ++ VP V ++ + RV CG
Sbjct: 206 VT------------VYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVL-GHVTRVCCG 252
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
TV LT +VYT G YGQLG+ + LP ++ S V IACG H AV
Sbjct: 253 GEHTVVLTEK-NVYTFGRGQYGQLGHGTFLFEVHLPKALQ-HFCNSKVRHIACGENHTAV 310
Query: 366 LTSKTEVYTWGKGANGRLGHGDTD--DRNSPSLVEALKDKQVKSIACG 411
+T +YT+G G +G+LG G+ + ++ SP+L V+S++CG
Sbjct: 311 VTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQYAVQSVSCG 358
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 129/285 (45%), Gaps = 50/285 (17%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L+ H +SCG H+AV+T G+L FG T+G LG + S P V++LK +
Sbjct: 33 LKNDHPKHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKL 92
Query: 240 AACGVWHT----------------------------------------AAVVEVMVG-NS 258
AACG HT A + + G N+
Sbjct: 93 AACGRDHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNT 152
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
S++ G+LF WGD G++ GD+ P V V V+CG+ + +T G
Sbjct: 153 SAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVH--VGEAVIWVSCGYKHSAFVTVYG 210
Query: 319 HVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
+YT G G+LG A+ ++P +V+G L V + CG H VLT K VYT+
Sbjct: 211 RLYTFGESANGRLGLQKEQLANHRVPQQVQGVLG--HVTRVCCGGEHTVVLTEKN-VYTF 267
Query: 376 GKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G+G G+LGHG + + P ++ + +V+ IACG N TA +
Sbjct: 268 GRGQYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVVT 312
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 29/317 (9%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
+K + P ++++ V+ ACG H + G V+S G G+LG G +
Sbjct: 72 IKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYF 131
Query: 120 KLIDALSN-MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
L+ + I++++ G + A+T G L+ WGD + G + G+E P+ V+
Sbjct: 132 HLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNS--VGQIAFGDEGFAAEPREVHV 189
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS--IPREVESLKGLR 236
G V +SCG H+A VT G+L+TFG+ G LG + + +P++V+ + G
Sbjct: 190 ---GEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLG-H 245
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAA 295
R CG HT + E V +T+G G G+LGHG ++ +P +
Sbjct: 246 VTRVCCGGEHTVVLTEKNV-------------YTFGRGQYGQLGHGTFLFEVHLPKALQH 292
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF--- 352
+ACG + T +T SG +YT G +G+LG + N+ L F
Sbjct: 293 FCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLG--LGEENFINQFSPTLCTRFLQY 350
Query: 353 -VEEIACGSYHVAVLTS 368
V+ ++CG +H+ VL +
Sbjct: 351 AVQSVSCGGHHMLVLAT 367
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
++CG H AV+T + +G G+LG P+ V+ALK ++VK ACG + T
Sbjct: 41 MSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHT 100
Query: 416 AAICLH 421
H
Sbjct: 101 IVCTFH 106
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 165/345 (47%), Gaps = 54/345 (15%)
Query: 76 LDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
LD Q I +CG H+ VN+QG+VF+WG GG+LG G ++ V P+LI L + I
Sbjct: 80 LDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIA 139
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISC 190
V CG H A++ G L+TWG T G LG G E S P+ + L GI ++ I+
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTS--GQLGLGKGEPSKLFPQPLKS-LAGIPLAKITA 196
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ +G +F +G G LG D + ++P ++ L+ + V +CG HTAA+
Sbjct: 197 GGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAAL 256
Query: 251 VEVMVGNSSS------SNCSS------------------------GKLFTWGDGDKGRLG 280
+V + ++S CS+ G LFT+GDG G+LG
Sbjct: 257 TKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLG 316
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMGSPVYGQLGNPQADGK 339
HG +L+P V L+ ++ CG T+A +SG VY G +GQLG + +
Sbjct: 317 HGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAE 376
Query: 340 ---LP----------NRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
P +R + K K V +I CG H +L S +
Sbjct: 377 KCLYPVKINLLSGNNHRTDSK--KYSVTKITCGGDHSFLLYSNEQ 419
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 156/353 (44%), Gaps = 49/353 (13%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ CGG+H+ + G V++ G G+LGH P+L+ AL I LV+CG+
Sbjct: 35 LKEAVCGGQHSVFLLHDGSVYTCGSNGCGQLGHNKPGT--SPELVGALDTQRITLVSCGQ 92
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV G ++ WG G + G LG G E + +P+ + L ++ + CG H
Sbjct: 93 AHSMAVNEQGQVFAWGAG--DGGQLGLGTTEAAVRIPRLIKR-LCDHRIAQVMCGNQHCI 149
Query: 197 VVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQLFT+G T G LG G S P+ ++SL G+ + G
Sbjct: 150 ALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAG------------ 197
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G+ S + SG +F WG G+LG D + + VP + L ++CG T ALT
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALT 257
Query: 316 ------TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG-SYHVAVLTS 368
S T G G+ NP F + I C S V +L
Sbjct: 258 KVRIRSASQCFRTSG----GRCSNP----------------FFCQRIGCSHSTRVTILLW 297
Query: 369 KTE---VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ ++T+G G+ G+LGHG T + P V L +V I CG + T A
Sbjct: 298 LFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAF 350
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 138/337 (40%), Gaps = 73/337 (21%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A+D R++L S + S G VF WG G G G LG G
Sbjct: 79 ALDTQRITLVSCGQAHSMAVNEQ-----GQVFAWGAGDG-GQLGLGTTEAA--------V 124
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLID 123
+P+ ++ + + CG +H ++K G++F+WG+ + G+LG G + L P+ +
Sbjct: 125 RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLK 184
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+L+ + + + G H+ A++LSG ++ WG G LG + VP + L
Sbjct: 185 SLAGIPLAKITAGGDHSFALSLSGAVFGWGKN--KAGQLGLNDIQDRAVPCHIKF-LRSQ 241
Query: 184 HVSSISCGPWHTAVVTSA------------------------------------------ 201
V ISCG HTA +T
Sbjct: 242 KVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQD 301
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
G LFTFGDG++G LGHG + +PR V L G + CG HT A
Sbjct: 302 GGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAP--------- 352
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAAL 296
SSG ++ +G G+LG G+ A+ L P + L
Sbjct: 353 --SSGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLL 387
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 172/379 (45%), Gaps = 77/379 (20%)
Query: 4 MAMDAFRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKM 62
+ +D R + + + G GH D G+V+ WG + G LG + S +
Sbjct: 15 LEIDMLR---NKGIYQVAGGDGHTVAVDIKGNVYSWG-ASACGQLG-----LASMKDLPT 65
Query: 63 D------SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
D P+ +E + V IACG H + + G+++SWG G+LGH D+
Sbjct: 66 DVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHP-DTSA 124
Query: 117 L-----------HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG 165
+ PKLI L N+ ++ VACG+ HT AV +G LY+WG G G LGH
Sbjct: 125 MPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGA--CGQLGHP 182
Query: 166 NEVS----------HWVPKRVNG--PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ S +P+ V P + IH SCG HT V+T G+++ FG G+ G
Sbjct: 183 DTSSFPADEDGYPYQPIPRCVTALKPFKLIHA---SCGDVHTMVLTDQGEIYCFGGGSCG 239
Query: 214 VLGHGDRKS----------VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
LG G+ + +P+++ESL+G+ V +CG H+ A+
Sbjct: 240 QLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMAL------------S 287
Query: 264 SSGKLFTWGDGDKGRLGHGD----------KEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G ++ WG+ G+LG D K + P V AL+ ++CG + T+A
Sbjct: 288 REGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLA 347
Query: 314 LTTSGHVYTMGSPVYGQLG 332
LT GH+Y+ G GQLG
Sbjct: 348 LTEGGHLYSFGGNTCGQLG 366
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 168/369 (45%), Gaps = 63/369 (17%)
Query: 67 PKALESAVVLD--VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-------- 116
P LE ++ + + +A G H V+ +G V+SWG + G+LG D+
Sbjct: 12 PHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYP 71
Query: 117 --LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY------NFGLLGHGNEV 168
P++I+ L ++ + +ACG+ HT A+T G LY+WG G + + +
Sbjct: 72 YQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDG 131
Query: 169 SHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---- 223
+ PK ++ L+ + V ++CG HT V + G L+++G G G LGH D S
Sbjct: 132 CPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADE 191
Query: 224 ------SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
IPR V +LK + + A+CG HT + + G+++ +G G G
Sbjct: 192 DGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTD------------QGEIYCFGGGSCG 239
Query: 278 RLGHGD-KEAKL---------VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+LG G+ + L VP + +L ++CG S ++AL+ GHVY G
Sbjct: 240 QLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEAT 299
Query: 328 YGQLG-------NPQADGK----LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
YGQLG D K P +V ++K V I+CG H LT +Y++G
Sbjct: 300 YGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIV-AISCGETHTLALTEGGHLYSFG 358
Query: 377 KGANGRLGH 385
G+LG
Sbjct: 359 GNTCGQLGQ 367
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 157/349 (44%), Gaps = 61/349 (17%)
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD------GTYNFGLLGHGNEVSHW 171
HP ID L N I VA G+ HT AV + G++Y+WG G + L E +
Sbjct: 13 HPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPY 72
Query: 172 VPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------- 223
P R+ L+ + V I+CG HT +T G+L+++G G G LGH D ++
Sbjct: 73 QPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132
Query: 224 ---SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
P+ + LK L + ACG HT AV+ ++G L++WG G G+LG
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVL------------NNGHLYSWGAGACGQLG 180
Query: 281 HGDKEA----------KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
H D + + +P CV AL +CG T+ LT G +Y G GQ
Sbjct: 181 HPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGGSCGQ 240
Query: 331 LGNPQADGK-----------LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
LG +P ++E L F+ ++CG H L+ + VY WG+
Sbjct: 241 LGFGNISQMPLDVDSCPFMPVPKKIES-LQGIFIVSLSCGDSHSMALSREGHVYAWGEAT 299
Query: 380 NGRLGHGDTDD--RNS--------PSLVEALKDKQVKSIACGTNFTAAI 418
G+LG D D +N+ P V AL +K++ +I+CG T A+
Sbjct: 300 YGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLAL 348
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGK-- 347
P + L +VA G TVA+ G+VY+ G+ GQLG LP VEG
Sbjct: 14 PLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMK-DLPTDVEGYPY 72
Query: 348 ---------LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT-----DD--- 390
L V +IACG H LT ++Y+WG G G+LGH DT D+
Sbjct: 73 QPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGC 132
Query: 391 --RNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+ P L+ LK+ +VK +ACG T A+ L+ W +G
Sbjct: 133 PYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNNGHLYSWGAG 174
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 161/321 (50%), Gaps = 22/321 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ +ACG +H+ + G V++ G S G+LGH D P+L+ AL I V+CG+
Sbjct: 36 LKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQ 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV G ++ WG G + G LG G E + VP+ + E +S + CG H
Sbjct: 94 AHSLAVNEQGQVFAWGAG--DGGQLGLGTAEEAVRVPRLIKKLCEH-RISQVMCGNHHCI 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQLF +G+ + G LG G + ++ P+ ++SL G+ + + G
Sbjct: 151 ALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAG------------ 198
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G+ S + SG +F WG G+LG D++ + VP + L ++CG T ALT
Sbjct: 199 GDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
G ++T G+ GQLG+ + LP RV +L + V +IACG H +A + S +Y
Sbjct: 259 KEGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIY 317
Query: 374 TWGKGANGRLGHGDTDDRNSP 394
+G G+LG G SP
Sbjct: 318 AFGCNTQGQLGTGIRGSAKSP 338
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 157/326 (48%), Gaps = 22/326 (6%)
Query: 97 VFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+ WG G+LG G ++ V P+ ++ VACG H+ + G +YT G
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ G LGH S P+ V G L+ +S +SCG H+ V GQ+F +G G G L
Sbjct: 62 SC--GQLGHDKGGSR--PELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQL 116
Query: 216 GHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G G ++V +PR ++ L R + CG H A+ + G+LF WG+
Sbjct: 117 GLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK------------DGQLFVWGEN 164
Query: 275 DKGRLGHGDKE-AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG- 332
G+LG G E + L P + +L +++ G + AL+ SG V+ G GQLG
Sbjct: 165 SSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
N + D +P ++ S+ V I+CG H A LT + ++T+G G+ G+LGH T +
Sbjct: 225 NDEQDRAVPCHIKFLRSQKVVY-ISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEP 283
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
P V L +V IACG N T A
Sbjct: 284 LPRRVMELMGTEVSQIACGRNHTLAF 309
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 138/263 (52%), Gaps = 21/263 (7%)
Query: 76 LDVQNIA---CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIE 131
LD Q I+ CG H+ VN+QG+VF+WG GG+LG G + + P+LI L I
Sbjct: 81 LDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRIS 140
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISC 190
V CG +H A++ G L+ WG+ + G LG G E S P+ + L GI ++ IS
Sbjct: 141 QVMCGNHHCIALSKDGQLFVWGENSS--GQLGLGKGEPSTLSPQPLKS-LCGIPLTQISA 197
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ +G +F +G + G LG D + ++P ++ L+ + V +CG HTAA+
Sbjct: 198 GGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ G LFT+G+G KG+LGH + +P V L+ ++ACG +
Sbjct: 258 TK------------EGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNH 305
Query: 311 TVALTTS-GHVYTMGSPVYGQLG 332
T+A S G +Y G GQLG
Sbjct: 306 TLAFVPSTGLIYAFGCNTQGQLG 328
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 34/307 (11%)
Query: 14 SSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
+ +S S G H + G VF WG G G G LG G + +P+ ++
Sbjct: 83 AQKISGVSCGQAHSLAVNEQGQVFAWGAGDG-GQLGLG--------TAEEAVRVPRLIKK 133
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIE 131
+ + CG H ++K G++F WGE S G+LG G + L P+ + +L + +
Sbjct: 134 LCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLT 193
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
++ G H+ A++ SG ++ WG + G LG +E VP + L V ISCG
Sbjct: 194 QISAGGDHSFALSFSGAVFGWGKNSA--GQLGLNDEQDRAVPCHIKF-LRSQKVVYISCG 250
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
HTA +T G LFTFG+G+ G LGH ++ +PR V L G + ACG HT A V
Sbjct: 251 EEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFV 310
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK--------EAKLVPTCVA-ALVEPNFC 302
S+G ++ +G +G+LG G + + + P C+ A C
Sbjct: 311 P-----------STGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHC 359
Query: 303 RVACGHS 309
+A HS
Sbjct: 360 TIAKIHS 366
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 171/346 (49%), Gaps = 34/346 (9%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G RHA L+ V + G+ SGG+LG P+ I AL N+ ++LV+CG+ H+
Sbjct: 35 ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSL 94
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AV G ++ WG G+ G LG G E ++P+++ L GI + ISCG +H+ ++
Sbjct: 95 AVCHKGKVFAWGVGSD--GQLGTGKFEEICFIPQKIKA-LTGIKIIQISCGYYHSLALSK 151
Query: 201 AGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQ+F++G + G LG G S + P+ V SL+G+ + A G H+ A+
Sbjct: 152 DGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--------- 202
Query: 260 SSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG F WG+ G+L G+ P V AL ++CG+ T LT
Sbjct: 203 ---SLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQ 259
Query: 317 SGHVYTMGSPVYGQLGN---PQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEV 372
+ V+T G +GQLG+ Q G P VEG V +I CGSYH +A + + +V
Sbjct: 260 NDQVFTFGDNSFGQLGHNGVSQTTG--PQLVEGIGGP--VSQIDCGSYHTLAYVYTTGQV 315
Query: 373 YTWGK--GANGRLGHGDTDDRNS--PSLVEA--LKDKQVKSIACGT 412
++G+ H +T NS L+ A L+D Q+K I GT
Sbjct: 316 VSFGREPSHTSNPTHPETPSENSDISCLISADDLRDIQIKHIFAGT 361
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 119/221 (53%), Gaps = 13/221 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ DG LG G CF +P+ +++ + + I+CG H+ ++
Sbjct: 100 GKVFAWGVGS-DGQLGTG-KFEEICF-------IPQKIKALTGIKIIQISCGYYHSLALS 150
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K G+VFSWG+ S G+LG G + P+ + +L + + VA G H+ A++LSG +
Sbjct: 151 KDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFG 210
Query: 152 WGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG+ + G+ V + P+ V G L+ + V ISCG HTAV+T Q+FTFGD
Sbjct: 211 WGNNSAGQLAFSGNNVLVQSYKPRSV-GALKNLGVVYISCGYEHTAVLTQNDQVFTFGDN 269
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+FG LGH + P+ VE + G + CG +HT A V
Sbjct: 270 SFGQLGHNGVSQTTGPQLVEGIGG-PVSQIDCGSYHTLAYV 309
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 23/236 (9%)
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H ++ + + GD + G LG S P +++L L +CG H+ AV
Sbjct: 37 GERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAV 96
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHS 309
C GK+F WG G G+LG G +E +P + AL +++CG+
Sbjct: 97 ------------CHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYY 144
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAV 365
++AL+ G V++ G +GQLG Q + P++ + +S + ++A G H
Sbjct: 145 HSLALSKDGQVFSWGKNSHGQLGLGQ---EFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 201
Query: 366 LTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L+ + WG + G+L G+ P V ALK+ V I+CG TA +
Sbjct: 202 LSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVL 257
>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 173/356 (48%), Gaps = 34/356 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
VQ ++CG +H + + G + S G+ G+LG ++ + I +L I ++CG
Sbjct: 36 VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGRKSNNSSIEQ--ISSLEAQTIVDISCGT 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-HWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV+ G +Y+WGDG+ G LG GN S ++ PK++ G L + ISCG +H+
Sbjct: 94 NHSVAVSDEGSIYSWGDGSE--GQLGTGNLSSRNFTPKKITG-LFNTKIIQISCGNFHSL 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ G++F++G G LG G + + + P+ V+SLKG+ V+ G
Sbjct: 151 ALSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAG------------ 198
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVA 313
G+ S + SG +F WG + G+LG K P V +L ++CG T
Sbjct: 199 GSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAV 258
Query: 314 LTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTE 371
L+ G VYT G +GQLG N +P ++E + V ++ACG YH + S
Sbjct: 259 LSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQ--VSQVACGRYHTLLYVFSCNR 316
Query: 372 VYTWGKGANGRLGHGD-TDDRNSPSLVEA--------LKDKQVKSIACGTNFTAAI 418
+ ++GKG+ + + +D+ PS + L+D VK I G N A+
Sbjct: 317 IVSFGKGSLRPQDNTECSDEAELPSEFDISSLVPTNDLRDVYVKWIFAGNNVGFAV 372
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 157/323 (48%), Gaps = 28/323 (8%)
Query: 97 VFSWGEESGGRLG--HGVDSDVLHPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWG 153
++ WG+ G+L G + +V+H K D + ++ V+CGE HT + G L + G
Sbjct: 1 MYCWGDNCFGQLALLQG-EKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCG 59
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
Y G LG + S ++++ LE + ISCG H+ V+ G ++++GDG+ G
Sbjct: 60 QNPY--GQLGRKSNNSSI--EQISS-LEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEG 114
Query: 214 VLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG G+ S + P+++ L + ++ +CG +H+ A+ E G++F+WG
Sbjct: 115 QLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE------------DGRVFSWG 162
Query: 273 DGDKGRLGHGDKEA-KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G + + P V +L +V G S + AL+ SG V+ G GQL
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQL 222
Query: 332 G---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G +P P+ V L V I+CG H AVL+ VYT+G +G+LG
Sbjct: 223 GFKSDPMKGTFKPHAVNS-LRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSG 281
Query: 389 DDRNSPSLVEALKDKQVKSIACG 411
+ + P +E QV +ACG
Sbjct: 282 NQTSVPQKIEDYAG-QVSQVACG 303
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 117/224 (52%), Gaps = 20/224 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ WG+G+ +G LG G + + PK + + I+CG H+ ++
Sbjct: 103 GSIYSWGDGS-EGQLGTG--------NLSSRNFTPKKITGLFNTKIIQISCGNFHSLALS 153
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH---PKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ G VFSWG+ G+LG G S +++ P+L+ +L + + V G + A+++SG +
Sbjct: 154 EDGRVFSWGQNKCGQLGLG--SQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTV 211
Query: 150 YTWGDGTYNFGLLGHGNEVSH--WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+ WG N G LG ++ + P VN L + V+ ISCG HTAV++ G ++TF
Sbjct: 212 FAWGKN--NAGQLGFKSDPMKGTFKPHAVNS-LRNLGVAYISCGEEHTAVLSKDGSVYTF 268
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
GD T G LG S+P+++E G + + ACG +HT V
Sbjct: 269 GDDTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTLLYV 311
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 22/286 (7%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+++ +GT +L G N G G K ++S + + S + +I+CG H+ V+ +
Sbjct: 47 LYLLEDGT---LLSCGQNPYGQ-LGRKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDE 102
Query: 95 GEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G ++SWG+ S G+LG G + S PK I L N I ++CG +H+ A++ G +++WG
Sbjct: 103 GSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWG 162
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G LG G+++ + ++ L+GI + ++ G + ++ +G +F +G G
Sbjct: 163 QN--KCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAG 220
Query: 214 VLGHGD--RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG K P V SL+ L +CG HTA + G ++T+
Sbjct: 221 QLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVL------------SKDGSVYTF 268
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
GD G+LG VP + +VACG T+ S
Sbjct: 269 GDDTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTLLYVFS 313
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 5/154 (3%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC--RVACGHSLTVALTTSGHVYTMGS 325
++ WGD G+L E ++V + C +V+CG T+ L G + + G
Sbjct: 1 MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
YGQLG + + L + +I+CG+ H ++ + +Y+WG G+ G+LG
Sbjct: 61 NPYGQLGRKSNNSSIEQI--SSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGT 118
Query: 386 GDTDDRN-SPSLVEALKDKQVKSIACGTNFTAAI 418
G+ RN +P + L + ++ I+CG + A+
Sbjct: 119 GNLSSRNFTPKKITGLFNTKIIQISCGNFHSLAL 152
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 45/331 (13%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPK--LIDALSN-MNIELVACGEYHTCAVTLS-GDLY 150
G V++WG G+ G + + P L + N + I+ +ACG+ H+ A+ +Y
Sbjct: 97 GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH------VSSISCGPWHTAVVTSAGQL 204
+WG +G LGHG++++ P ++ G S ++CG H+ +V++ G+L
Sbjct: 157 SWG--VNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+TFG GT G LGHGD + P V SL G V A GV H++ V S
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVD------------S 262
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPT----------------CVAALVEPNFCRVACGH 308
+GK+++WG G+LG+G +++ +PT L++ NF +V CG
Sbjct: 263 NGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGK 322
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ T+AL++SG V G GQLGN D P ++E V +IA G YH LT
Sbjct: 323 NHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIE---FNEHVIDIASGYYHSLCLT 379
Query: 368 SKTEVYTWGKGANGRLGHGDT-DDRNSPSLV 397
E Y+WG ++G LG G+ + P L+
Sbjct: 380 DNGEAYSWGYMSDGSLGLGEVYTHQTKPKLI 410
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 193/427 (45%), Gaps = 89/427 (20%)
Query: 46 VLGGGLNRVGSCFGVKMDSSL--PKALESAVV---LDVQNIACGGRHAALVNKQGE-VFS 99
V G N G C G K + ++ P ++ + + ++ IACG H+ + +Q V+S
Sbjct: 99 VYAWGYNYFGQC-GDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVYS 157
Query: 100 WGEESGGRLGHGVDSDVLHPKLI-------DALSNMNIELVACGEYHTCAVTLSGDLYTW 152
WG G+LGHG + P L+ + ++++ +VACG H+ V+ G+LYT+
Sbjct: 158 WGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGELYTF 217
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G GT G LGHG+E + P V+ L G + S++ G H++ V S G+++++G +
Sbjct: 218 GCGTT--GRLGHGDEQPKFKPTPVSS-LVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRY 274
Query: 213 GVLGHGDRKSVSIP----------------REVESLKGLRTVRAACGVWHTAAVVEVMVG 256
G LG+G KS ++P ++ L L ++ CG HT A+
Sbjct: 275 GQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLAL------ 328
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SSG++ +G G+LG+G+ +L P V + +A G+ ++ LT
Sbjct: 329 ------SSSGEVVGFGFNACGQLGNGNHMDQLYP--VKIEFNEHVIDIASGYYHSLCLTD 380
Query: 317 SGHVYTMGSPVYGQLG-----NPQADGKLP----------------NRVEGK-------- 347
+G Y+ G G LG Q KL N + G+
Sbjct: 381 NGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIRHCFTDSNDAFNEIYGRQDENTTQE 440
Query: 348 --------LSKSF-----VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
LSK + V+ I+ G+++ A++TS +++ +G G R G+ D++ P
Sbjct: 441 TIDQHKLYLSKKYSVGDTVDMISAGAWNSAIITSSGKLFCFGFGDTYRNGNQSEFDQDMP 500
Query: 395 SLVEALK 401
+VE K
Sbjct: 501 IIVEPTK 507
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN---FCRVACG--HSLTVALTTSGHV 320
G ++ WG G+ G + VPT + N ++ACG HSL +A G V
Sbjct: 97 GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYG-V 155
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKL-----------SKSFVEEIACGSYHVAVLTSK 369
Y+ G +GQLG+ G NR + L + +ACGS H ++++
Sbjct: 156 YSWGVNRWGQLGH----GDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNY 211
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
E+YT+G G GRLGHGD + P+ V +L K + S+A G ++ +
Sbjct: 212 GELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCV 260
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 168/350 (48%), Gaps = 38/350 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++IWG+G G G LG G F ++ +L A + +A GG H+ +
Sbjct: 125 GNIWIWGKGDG-GRLGFGHEN--PVFVPTLNPNLDPA---------KCVALGGVHSVALT 172
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VF+WG G LGH V L P+L+ +SN I +A HT A+T +G++YTW
Sbjct: 173 SLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTW 232
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
GDG G NE +P +V + V+++ CG + TAV+T GQ++ +
Sbjct: 233 GRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT--VPVAAVFCGGFFTAVLTEEGQIWNW 290
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G + LG G++ P+ + +L+G+R ++ A G +H+ A+ + GK
Sbjct: 291 GANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTD------------EGK 338
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ +WG G G+LGH + + +P + AL + +ACG S + A+T G +Y G+
Sbjct: 339 VLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAK 398
Query: 328 YGQLGNPQADGKLPNRVE-------GKLSKSFVEEIACGSYHVAVLTSKT 370
QLG P P VE L V +A G+ H L +T
Sbjct: 399 DSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCLVLRT 448
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 174/374 (46%), Gaps = 57/374 (15%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDAL------------------SNMN-------- 129
++ SWG S G+LG G++ L+P + L N N
Sbjct: 48 QLLSWGRGSSGQLGGGIEETRLYPSPVANLHALPSSFSLSPTPGQLLIKNQNSTITKQEA 107
Query: 130 IEL-VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
IE+ ++CG +H+ A+ + G+++ WG G + G LG G+E +VP +N L+ +
Sbjct: 108 IEVGISCGLFHS-ALLVDGNIWIWGKG--DGGRLGFGHENPVFVPT-LNPNLD--PAKCV 161
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+ G H+ +TS GQ+FT+G G FG LGH +PR V+ + + A HTA
Sbjct: 162 ALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTA 221
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPTCVAALVEPNF 301
A+ E +G+++TWG +GD + +P+ V AL P
Sbjct: 222 AITE------------TGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVP-V 268
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
V CG T LT G ++ G+ +LG G + L V +IA G Y
Sbjct: 269 AAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGY 328
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H LT + +V +WG G +G+LGH ++ P +++AL D++V IACG + +AAI
Sbjct: 329 HSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDE 388
Query: 420 --LHKWVSGVDQSM 431
L+ W + D +
Sbjct: 389 GKLYMWGNAKDSQL 402
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 204/470 (43%), Gaps = 76/470 (16%)
Query: 1 MKAMAMDAFRVSLSSAVSSSS-------------QGSGHDDGDALG-DVFIWGEGTGDGV 46
MK F SL+ +S+SS + + H+ D++ + WG G+ G
Sbjct: 1 MKHFLHQRFTASLTRRISTSSPNKNKLPILYKTPEINDHNRNDSVTLQLLSWGRGS-SGQ 59
Query: 47 LGGGLNR-------VGSCFGVKMDSSLPKALESAVVLDVQN------------IACGGRH 87
LGGG+ V + + SL +++ QN I+CG H
Sbjct: 60 LGGGIEETRLYPSPVANLHALPSSFSL-SPTPGQLLIKNQNSTITKQEAIEVGISCGLFH 118
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE---LVACGEYHTCAVT 144
+AL+ G ++ WG+ GGRLG G ++ V P L N N++ VA G H+ A+T
Sbjct: 119 SALL-VDGNIWIWGKGDGGRLGFGHENPVFVPTL-----NPNLDPAKCVALGGVHSVALT 172
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
G ++TWG G FG LGH +P+ V G + + I+ HTA +T G++
Sbjct: 173 SLGQVFTWGYG--GFGALGHCVYHRELLPRLVQG-ISNEKIRHIATSGTHTAAITETGEV 229
Query: 205 FTFG-------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T+G G G + +SIP +V++L + CG + TA + E
Sbjct: 230 YTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT-VPVAAVFCGGFFTAVLTE----- 283
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G+++ WG LG G+K P + L ++A G ++ALT
Sbjct: 284 -------EGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDE 336
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
G V + G +GQLG+P + V L+ V IACG A +T + ++Y WG
Sbjct: 337 GKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGN 396
Query: 378 GANGRLG-HGDTDDRNSPSLV------EALKDKQVKSIACGTNFTAAICL 420
+ +LG G + + P V + L +V S+A G + A+CL
Sbjct: 397 AKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASH--AMCL 444
>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Acyrthosiphon pisum]
Length = 1053
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 170/353 (48%), Gaps = 37/353 (10%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL--IDALSNMNIELVA 134
+++++ACG H V + G++++ G G+LGH D KL I + ++ + VA
Sbjct: 36 NIKSVACGNNHTLAVTEDGQLYACGSNDFGQLGH----DGCRTKLQKIPGVESLVMTSVA 91
Query: 135 CGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
CGE H+ A+ G LYTWG D GL +E + PK V L + + ISCG
Sbjct: 92 CGEAHSMALNEWGQLYTWGSDSCGQLGL--ETDEGIQYKPKIVK-TLASMLLVQISCGYK 148
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H +T+ G+L+T+G FG LG G +VS P V SL GL ACG +H+ V
Sbjct: 149 HCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVV-- 206
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
SG +F WG D G+LG + + P + + +A G +V
Sbjct: 207 ----------SKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSV 256
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT-SKTE 371
LT G V+T G+ +YGQLG+ ++ R +L S V ++ CG H L SK
Sbjct: 257 FLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGR 316
Query: 372 VYTWGKGANGRLGHGDTDDRNSP-------------SLVEALKDKQVKSIACG 411
VY++G G+ G+LG + + N+P S++E K VKSI G
Sbjct: 317 VYSFGLGSVGQLGTKSSINSNTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAG 369
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 25/269 (9%)
Query: 14 SSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES 72
S ++S + G H + G ++ WG + G LG + G++ + K L S
Sbjct: 84 SLVMTSVACGEAHSMALNEWGQLYTWGSDSC-GQLGLETDE-----GIQYKPKIVKTLAS 137
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWG-EESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
+++ I+CG +H + GE+++WG E G +V P L+++L + I
Sbjct: 138 MLLV---QISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPIS 194
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+ACG YH+ V+ SG ++ WG +FG LG ++ S P ++ + + V I+ G
Sbjct: 195 FIACGGYHSFVVSKSGAVFGWGKN--DFGQLGINSQTSLSSPAQLK-TIRTVKVKYIAGG 251
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ +T G +FT G G +G LGHG + +PR+V L G + CG HT +V
Sbjct: 252 EDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLV 311
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
S G+++++G G G+LG
Sbjct: 312 P-----------SKGRVYSFGLGSVGQLG 329
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
S P + S V L + IACGG H+ +V+K G VF WG+ G+LG + + P +
Sbjct: 180 SKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKT 239
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ + ++ +A GE + +T G ++T G G Y G LGHG+ + VP++V L G
Sbjct: 240 IRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMY--GQLGHGSFSNEIVPRKV-LELMGST 296
Query: 185 VSSISCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
V+ ++CG HT +V S G++++FG G+ G LG + + P+ V
Sbjct: 297 VTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 342
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 144/281 (51%), Gaps = 32/281 (11%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
SG L + + Y +GLLG G + P++VN LEG V+ +S G H A + G +F
Sbjct: 46 SGRLRRFLERMYCWGLLGLGETLDVLYPQKVN--LEG--VTCVSAGHRHAAAIVGGGDVF 101
Query: 206 TFGDGTFGVLGHGDRKS------VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+G G G LG G KS +S P V++L +CG H+ + E
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSFPMPVKAL--------SCGGSHSLFITE------- 146
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA-CGHSLTVALTTSG 318
G+L+ G G +G+LG G +E+ L P V + A CG +V T SG
Sbjct: 147 -----DGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESG 201
Query: 319 HVYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
V+T GS YGQLG Q A + + L+ V IA G YH A +TS ++YTWG
Sbjct: 202 QVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGY 261
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G +G+LG+G+T D + P LV L++ +V+S+ACG + T A+
Sbjct: 262 GRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 160/334 (47%), Gaps = 49/334 (14%)
Query: 106 GRLGHGVDSDVLHPKLIDALSNMNIELVAC---GEYHTCAVTLSGDLYTWGDGTYNFGLL 162
G LG G DVL+P+ +N+E V C G H A+ GD++ WG G G L
Sbjct: 60 GLLGLGETLDVLYPQ------KVNLEGVTCVSAGHRHAAAIVGGGDVFVWGRGFS--GQL 111
Query: 163 GHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS 222
G G SH+ P+ ++ P+ V ++SCG H+ +T G+L+ G G G LG G ++S
Sbjct: 112 GLGTNKSHFTPQPLSFPMP---VKALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQES 168
Query: 223 VSIPREVESLKGLRTVRAA-CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
V P EV+ +G V+AA CG + E SG++FT+G D G+LG
Sbjct: 169 VLSPVEVQMPEGSGRVKAAECGKDFSVIATE------------SGQVFTFGSDDYGQLGL 216
Query: 282 GD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGK 339
G + P VA L N +A G A+T+ G +YT G GQLGN D
Sbjct: 217 GQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVS 276
Query: 340 LPNRVEGKLSKSFVEEIACGSYHVAVLTSK----------------TEVYTWGKGANGRL 383
LP V +L V+ +ACG H + + EV+ G+G G+L
Sbjct: 277 LPVLVR-ELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQL 335
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G GD + SP++ ++ QV+ +ACGT+ T A
Sbjct: 336 GRGDIVE--SPAVYRSVP-LQVQQVACGTSHTLA 366
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 151/299 (50%), Gaps = 27/299 (9%)
Query: 24 SGHDDGDAL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQN 80
+GH A+ GDVF+WG G G LG G N+ S F P+ L + + V+
Sbjct: 86 AGHRHAAAIVGGGDVFVWGRGF-SGQLGLGTNK--SHF-------TPQPL--SFPMPVKA 133
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM-NIELVACGEYH 139
++CGG H+ + + G +++ G G+LG G VL P + ++ CG+
Sbjct: 134 LSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDF 193
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+ T SG ++T+G Y G LG G + + + L G +V SI+ G +H A VT
Sbjct: 194 SVIATESGQVFTFGSDDY--GQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVT 251
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS- 258
S G+L+T+G G G LG+G+ VS+P V L+ LR ACG HT AV++ +
Sbjct: 252 SDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQL 311
Query: 259 ---SSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SS SG++F G G +G+LG GD E+ V V V+ +VACG S T+A
Sbjct: 312 MLISSQVLESGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQVQ----QVACGTSHTLA 366
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 144/328 (43%), Gaps = 51/328 (15%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G +D P+ + + V ++ G RHAA + G+VF WG G+LG G +
Sbjct: 64 LGETLDVLYPQKVN---LEGVTCVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHF 120
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P+ + M ++ ++CG H+ +T G LY G G G LG G++ S P V
Sbjct: 121 TPQPLSF--PMPVKALSCGGSHSLFITEDGRLYATGRGKE--GQLGTGSQESVLSPVEVQ 176
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLR 236
P V + CG + + T +GQ+FTFG +G LG G ++ P+EV L G
Sbjct: 177 MPEGSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKN 236
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
A G +H AAV S GKL+TWG G G+LG+G+ +P V L
Sbjct: 237 VRSIAAGDYHAAAVT------------SDGKLYTWGYGRSGQLGNGNTVDVSLPVLVREL 284
Query: 297 VEPNFCRVACGHSLTVALT----------------TSGHVYTMGSPVYGQLG------NP 334
VACG TVA+ SG V+ MG GQLG +P
Sbjct: 285 QNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVESP 344
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYH 362
+P + V+++ACG+ H
Sbjct: 345 AVYRSVPLQ---------VQQVACGTSH 363
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 170/359 (47%), Gaps = 20/359 (5%)
Query: 63 DSSLPKAL-ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES-GGRLGHGVDSDVLHPK 120
D LP + E V + A G L+ + E++ WG L D + +P
Sbjct: 73 DYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRRDKRIYYPT 132
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
L + ++ I + G H A++ +G++Y WG+ FG G GN+ + +P R+
Sbjct: 133 LCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNS--EFGQTGLGNKEAQHLPIRMEF-F 189
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ +SCG H+A V+ G+++T+G G G LGH + P+E+ ++G R
Sbjct: 190 RDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRV 249
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
CG T + N + G+LFT+G+G+ G+LGHG++ L P+ V N
Sbjct: 250 TCGTDFTGLL-----------NETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL---DN 295
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACG 359
VA G + +ALT G ++ G G+LG+ + L P + V ++ G
Sbjct: 296 VKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAG 355
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H LT +VY WG A+GRLG G+ +P+L++AL DK+V CG + + I
Sbjct: 356 GGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFI 414
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 138/304 (45%), Gaps = 20/304 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P E A L + I G +H ++K GEV+ WG G+ G G P ++
Sbjct: 131 PTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEFFR 190
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ +I V+CG H+ AV+ G ++TWG G G LGH PK + + G +S
Sbjct: 191 DKSIVDVSCGLDHSAAVSKDGRVWTWGYGID--GQLGHNGTEDELKPKELT-VIRGEGIS 247
Query: 187 SISCGPWHTAVVT-SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
++CG T ++ + G+LFTFG+G G LGHG+R + + V L ++ V A G
Sbjct: 248 RVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGER-GLCLEPSVVPLDNVKEV--AAGGA 304
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCRV 304
H A+ + G+ ++WG G+ GRLGHG E L P + L V
Sbjct: 305 HMLALTK------------DGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSV 352
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
+ G ++ALT SG VY G G+LG + + L+ V CG H
Sbjct: 353 SAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSL 412
Query: 365 VLTS 368
+T
Sbjct: 413 FITQ 416
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 136/296 (45%), Gaps = 35/296 (11%)
Query: 24 SGHDDGDAL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQN 80
+G G AL G+V+IWG + G G K LP +E + +
Sbjct: 147 TGRQHGIALSKNGEVYIWGNSE--------FGQTG--LGNKEAQHLPIRMEFFRDKSIVD 196
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H+A V+K G V++WG G+LGH D L PK + + I V CG T
Sbjct: 197 VSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFT 256
Query: 141 CAVT-LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+ G L+T+G+G G LGHG P V PL+ +V ++ G H +T
Sbjct: 257 GLLNETEGRLFTFGNG--EAGQLGHGERGLCLEPSVV--PLD--NVKEVAAGGAHMLALT 310
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL-KGLRTVRAACGVWHTAAVVEVMVGNS 258
GQ +++G G G LGHG + P + +L + V + G H+ A+ E
Sbjct: 311 KDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTE------ 364
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
SG+++ WG GRLG G++ + + PT + AL + R CG HSL +
Sbjct: 365 ------SGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFI 414
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 16/221 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G DG LG D PK L + + CG L+N
Sbjct: 211 GRVWTWGYGI-DGQLGHNGTE---------DELKPKELTVIRGEGISRVTCGTDFTGLLN 260
Query: 93 K-QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ +G +F++G G+LGHG L P ++ N++ VA G H A+T G ++
Sbjct: 261 ETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL---DNVKEVAAGGAHMLALTKDGQAWS 317
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG G G LGHG P+ + + V S+S G H+ +T +GQ++ +G
Sbjct: 318 WGWG--EDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNA 375
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
G LG G+ SV P +++L R +RA CG+ H+ + +
Sbjct: 376 SGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 198 VTSAGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLK-GLRTVRAACGVWHTAAVVEVMV 255
V GQ ++T G G LG GD + +P V+ L G + AA G W ++
Sbjct: 48 VPKPGQGVYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAG-WTQNFLL---- 102
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVAL 314
+ +L+ WG L ++ ++ PT ++ G +AL
Sbjct: 103 -------TTRHELYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIAL 155
Query: 315 TTSGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
+ +G VY G+ +GQ LGN +A LP R+E KS V+ ++CG H A ++ V
Sbjct: 156 SKNGEVYIWGNSEFGQTGLGNKEAQ-HLPIRMEFFRDKSIVD-VSCGLDHSAAVSKDGRV 213
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+TWG G +G+LGH T+D P + ++ + + + CGT+FT +
Sbjct: 214 WTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLL 259
>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
mutus]
Length = 1019
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 171/344 (49%), Gaps = 30/344 (8%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G H+ L+ G V S G+ S G+LG P+ I AL +++ LV+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 88
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
AV G ++ WG + G LG G + + ++PK++ L GI + ++CG +H+ ++
Sbjct: 89 AVCHKGRVFAWGAASE--GQLGIGEFKETTFIPKKIKT-LAGIKIIQVACGHYHSVALSE 145
Query: 201 AGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQ+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL--------- 196
Query: 260 SSNCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
SG F WG + G+L G+ + P + AL ++CG+ T LT
Sbjct: 197 ---SLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 317 SGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G YGQLG +P A+ + P VE + V +I CGS H +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 375 WGKGAN--GRLGH----GDTDDRNSPSLVEALKDKQVKSIACGT 412
+G+G R H ++ D + + L D QVK I GT
Sbjct: 312 FGRGPGCASRSPHPGALAESSDISCLVSAKDLADVQVKHIFAGT 355
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V+L S S H G VF WG +G LG G K +
Sbjct: 71 ALETLHVALVSCGKEHSLAVCHK-----GRVFAWG-AASEGQLGIG--------EFKETT 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+PK +++ + + +ACG H+ +++ G+VFSWG S G+LG G + P+ +
Sbjct: 117 FIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G +H+ A++LSG + WG L G+ V + P + G L+
Sbjct: 177 SLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSI-GALKT 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V SISCG HTAV+T G++FTFGD ++G LGH P+ VE ++GL + + C
Sbjct: 236 LGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G HT A +
Sbjct: 295 GSDHTLAYI 303
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
P+ + + L V ++CG H+ V +G VF+WG S G+LG G PK I L
Sbjct: 66 PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+ + I VACG YH+ A++ G +++WG ++ G LG G E S P+RV LEGI
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVS--IPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G G L G+ V P + +LK L V +
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+GD G+LGH K P V +E
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER-IEGLV 289
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ CG T+A + T+G V + G
Sbjct: 290 SQIDCGSDHTLAYIYTTGQVVSFG 313
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 23/236 (9%)
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ S G + + GD + G LG P + +L+ L +CG H+ AV
Sbjct: 31 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 90
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHS 309
C G++F WG +G+LG G+ KE +P + L +VACGH
Sbjct: 91 ------------CHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAV 365
+VAL+ G V++ G+ +GQLG + P++ + +S + ++A G +H
Sbjct: 139 HSVALSEDGQVFSWGTNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFA 195
Query: 366 LTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L+ + WG G+L G+ R P + ALK V SI+CG TA +
Sbjct: 196 LSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P ++ + L V +I+CG +H A++ + G+VF++G+ S G+LGH ++ P+L++ +
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286
Query: 127 NMNIELVACGEYHTCA-VTLSGDLYTWGDG------TYNFGLLGHGNEVSHWVPKRVNGP 179
+ + + CG HT A + +G + ++G G + + G L +++S V +
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGALAESSDISCLVSAK---D 342
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
L + V I G + V TS D S S+PR+
Sbjct: 343 LADVQVKHIFAGTYANFVTTS----------------QKDTSSTSVPRK 375
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 32/298 (10%)
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-HWVPKRVN----GPLEGIHVS 186
++ CG HT A+ +G +YTWG G LG G +S H +P ++ LE ++V
Sbjct: 827 VLNCGYGHT-ALIRNGTIYTWGQTVK--GCLGQGPTMSRHSLPSPISLLNCFKLEVLYV- 882
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+CG HT +T+ G ++ +G +G LG GD PR + SL + +CG +H
Sbjct: 883 --ACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFH 939
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
T A+ E G++F WG G G+LG G+ + + +P CV L + +A
Sbjct: 940 TLALTE------------KGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAA 987
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG------KLSKSFVEEIACG 359
GH ++ L+ G +++ GS V+GQLG +P ++G ++ + I+CG
Sbjct: 988 GHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCG 1047
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+H A+LT VYTWG+ +G+LG+G + +P+ + + I+CG FTAA
Sbjct: 1048 CHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINE-NTFKADCISCGCEFTAA 1104
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 158/315 (50%), Gaps = 28/315 (8%)
Query: 23 GSGHDDGDALGDVFIWGEGTGDGVLGGG--LNRVGSCFGVKMDSSLPK--ALESAVVLDV 78
G GH G ++ WG+ T G LG G ++R SLP +L + L+V
Sbjct: 831 GYGHTALIRNGTIYTWGQ-TVKGCLGQGPTMSR----------HSLPSPISLLNCFKLEV 879
Query: 79 QNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY 138
+ACG H + G V++WG G+LG G + +P+LI +L+N N+ ++CG++
Sbjct: 880 LYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQF 938
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
HT A+T G ++ WG G + G LG GN +P VN L+ + I+ G H+ V+
Sbjct: 939 HTLALTEKGQVFAWGWGVH--GQLGLGNIDDQRLPVCVNH-LKDQVIKDIAAGHGHSLVL 995
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
+ GQ+F+FG G FG LG G+ S+P ++ + + + A G +H+ + G
Sbjct: 996 SDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISE-KIILIATGYFHS-----ISCGCH 1049
Query: 259 SSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT-T 316
S+ + SG ++TWG G+LG+G + PT + C ++CG T A
Sbjct: 1050 HSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTFKADC-ISCGCEFTAAQEKQ 1108
Query: 317 SGHVYTMGSPVYGQL 331
+G ++ GS GQ+
Sbjct: 1109 TGKIFCWGSNSVGQV 1123
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG---DRKSVSIPREVESLKGLRTVRAAC 242
S ++CG HTA++ + G ++T+G G LG G R S+ P + + L + AC
Sbjct: 826 SVLNCGYGHTALIRN-GTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVAC 884
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G HT A+ ++ ++ WG G+LG GD P + +L N
Sbjct: 885 GKNHTTAL-------------TNNGVYAWGCSKYGQLGLGDVYESPYPRLITSLANENVI 931
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
++CG T+ALT G V+ G V+GQLG D + L +++IA G H
Sbjct: 932 TLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGH 991
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQV-------KSIACGTNFT 415
VL+ K +++++G G G+LG G+T + P L++ + +K + SI+CG + +
Sbjct: 992 SLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHS 1051
Query: 416 AAIC----LHKWVSGVDQSMCSG--------CRLPFNNFKRKRHNCYNCGLVF 456
A + ++ W +D + +G ++ N FK +C +CG F
Sbjct: 1052 ALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTFKA---DCISCGCEF 1101
>gi|299117183|emb|CBN75147.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1991
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 161/342 (47%), Gaps = 56/342 (16%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV--AC 135
V +ACG RH+ALV G V + G GRLGHG + D L PK++ AL++ +V C
Sbjct: 1596 VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAGC 1655
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISCGPWH 194
G HT SG +Y+WG G LG + V P+RV G+ ++ +SCG H
Sbjct: 1656 GREHTLVALASGSVYSWGWGEGGRLGLGEVDAV--LSPRRVEEFDNLGVRITRVSCGREH 1713
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHG---DRKSVSIPREVES--LKGLRTVRAACGVWHTAA 249
+ V+ AG+L+ FG G LG VS PR V + L R V AA G H++
Sbjct: 1714 SLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVVAAAGGQMHSSC 1773
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL------------- 296
V C+SGK+FTWG G G LGHG E + P V+
Sbjct: 1774 V------------CASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAG 1821
Query: 297 --VEPN----FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG---- 346
+P+ VACG T+ LT +G V+ G GQLG G+ +R
Sbjct: 1822 EQDDPDADILATSVACGAWHTLVLTKAGKVHAFGDGFTGQLGLEDRGGEKESRALSPRVV 1881
Query: 347 KLSKS-----------FVEEIACGSYHVAVLTSKTEVYTWGK 377
++ ++ +V E+ACGS+ AV++S+ +Y WGK
Sbjct: 1882 RIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGK 1923
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 115/238 (48%), Gaps = 21/238 (8%)
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR--TVRAA 241
V ++CG H+A+VT++G + T G G G LGHGD + P+ V +L + V A
Sbjct: 1595 QVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAG 1654
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEP 299
CG HT + +SG +++WG G+ GRLG G+ +A L P V +
Sbjct: 1655 CGREHTLVAL------------ASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGV 1702
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG----KLPNRVEGK-LSKSFVE 354
RV+CG ++A++ +G +Y G G+LG G P V L++ V
Sbjct: 1703 RITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVV 1762
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
A G H + + + +V+TWG G+ G LGHG +D +P +V + +S G
Sbjct: 1763 AAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGA 1820
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 138/307 (44%), Gaps = 62/307 (20%)
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL--VACGEYHT 140
CG H + G V+SWG GGRLG G VL P+ ++ N+ + + V+CG H+
Sbjct: 1655 CGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGVRITRVSCGREHS 1714
Query: 141 CAVTLSGDLYTWGD---GTYNF-GLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHT 195
AV+ +G LY +G G F ++G G VS P+ V P L V + + G H+
Sbjct: 1715 LAVSDAGRLYAFGPSDGGRLGFKAVVGTGG-VS--APRIVRAPCLAEERVVAAAGGQMHS 1771
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL-------------------KGLR 236
+ V ++G++FT+G G+ G LGHG + PR V +
Sbjct: 1772 SCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAGEQDDPDADIL 1831
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH----GDKEAK-LVPT 291
ACG WHT + + +GK+ +GDG G+LG G+KE++ L P
Sbjct: 1832 ATSVACGAWHTLVLTK------------AGKVHAFGDGFTGQLGLEDRGGEKESRALSPR 1879
Query: 292 CVAALVEPN------------FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK 339
V +E N VACG + +++ G++Y G P +P AD +
Sbjct: 1880 VVR--IERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYHWGKPDAFSDDDPVADKR 1937
Query: 340 --LPNRV 344
LP RV
Sbjct: 1938 YLLPRRV 1944
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 336 ADGKL---PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
ADG L P R+ + V ++ACG H A++T+ V T G G GRLGHGD +D
Sbjct: 1579 ADGALKLLPLRIPTEWQ---VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDAL 1635
Query: 393 SPSLVEALKDKQVKSI--ACGTNFT 415
P +V AL D + + CG T
Sbjct: 1636 EPKVVRALADTKQAVVWAGCGREHT 1660
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 170/364 (46%), Gaps = 40/364 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ IACGG H + + G V++ G G+LG L + ++ G
Sbjct: 67 LNAIACGGAHTLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGY 126
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-LEGIHVSSISCGPWHTA 196
H+CA+T+ G+LY WG T G LG G + VP L+GI++ + G H+
Sbjct: 127 NHSCAITVDGELYMWGKNTS--GQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSV 184
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHT 247
++ G F++G G G LGHG SV PR ++ L+G++ A G+ ++
Sbjct: 185 AISDGGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNS 244
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A E +G +F +G+ +L + P+ ++ L P+ VACG
Sbjct: 245 ACTDE------------NGCVFVFGERGIEKLRLKEMSDATKPSLISEL--PSSKEVACG 290
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVL 366
T LT SG +YT GS G LG +D LP +V+G KS V +++CG H A +
Sbjct: 291 GYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI 350
Query: 367 TSKTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
S+ V+TWG G ++G+LGHG D +P+ V +D + ++CG N
Sbjct: 351 -SEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNH 409
Query: 415 TAAI 418
T AI
Sbjct: 410 TGAI 413
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 154/348 (44%), Gaps = 40/348 (11%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G R AAL WG GRLG G P + A N + +ACG HT +
Sbjct: 30 GKRFAAL---------WGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFL 80
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T G +Y G +FG LG +E H+ + + E V IS G H+ +T G+
Sbjct: 81 TEDGCVYA--TGLNDFGQLGV-SESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137
Query: 204 LFTFGDGTFGVLGHGDRKS--VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
L+ +G T G LG G R V +P +VE LKG+ AA G H+ A+ +
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISD--------- 188
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKL---------VPTCVAALVEPNFCRVACGHSLTV 312
G F+WG G GRLGHG + + L P + L VA G +
Sbjct: 189 ---GGAAFSWGIGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSA 245
Query: 313 ALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+G V+ G +L +D P+ + +L S +E+ACG YH VLT+ E
Sbjct: 246 CTDENGCVFVFGERGIEKLRLKEMSDATKPSLIS-ELPSS--KEVACGGYHTCVLTNSGE 302
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEA-LKDKQVKSIACGTNFTAAI 418
+YTWG NG LG G +D + P V+ V ++CG TAAI
Sbjct: 303 LYTWGSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI 350
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 115/232 (49%), Gaps = 18/232 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG G G LG G F P+ ++ + V+ +A G ++A +
Sbjct: 190 GAAFSWGIGV-SGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTD 248
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G VF +GE +L SD P LI L + + VACG YHTC +T SG+LYTW
Sbjct: 249 ENGCVFVFGERGIEKLRLKEMSDATKPSLISELPSS--KEVACGGYHTCVLTNSGELYTW 306
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---- 208
G + G LG G+ +P++V GP VS +SCG HTA + S G++FT+G
Sbjct: 307 G--SNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAI-SEGRVFTWGWGGS 363
Query: 209 DGTF--------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+GTF G LGHG P V + ++ ++ +CG HT A++E
Sbjct: 364 NGTFSEVGHSSSGQLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILE 415
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 18/293 (6%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVF-SWGEESGGRLGHGVDSDVLHPKLIDA 124
L + L S +L C +A+ VN G V SWG G+LGHG D L P + A
Sbjct: 38 LARFLISTPLLPESWRLCSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSA 97
Query: 125 LSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+I V CG +T A + SG D+Y+WG G +FG LGHG+ ++P + L+G+
Sbjct: 98 FDGQDIVSVTCGADYTVARSKSGKDVYSWGWG--DFGRLGHGDPSDLFIPHPIRA-LQGL 154
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
+ ISCG H VT ++ ++G G LG G K +P+++ + +G+R A G
Sbjct: 155 RIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAG 214
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
H+ A+ E G L+ WG G G LG GD +L+P V +
Sbjct: 215 AEHSVAITE------------DGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVM 261
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEI 356
V+CG T+++++SG +YT G YGQLG+ + L R LS + ++
Sbjct: 262 VSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 20/277 (7%)
Query: 135 CGEYHTCAVTLSGDLY-TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
C + + AV G++ +WG G G LGHG+ +P +++ +G + S++CG
Sbjct: 55 CSKVNASAVNFPGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGAD 111
Query: 194 HTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+T + +G+ ++++G G FG LGHGD + IP + +L+GLR + +CG H AV
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT- 170
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
K+ +WG G LG G + VP + A VA G +V
Sbjct: 171 -----------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSV 219
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
A+T G +Y G YG LG + +L P +V + + ++CG H ++S
Sbjct: 220 AITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGG 277
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+YT G G+LGHGD +D P V+AL DK + +
Sbjct: 278 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WG G R+G G D +P + + L ++ I+CG H V
Sbjct: 122 DVYSWGWGD--------FGRLG--HGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+ +V SWG G LG G D P+ I A + I++VA G H+ A+T GDLY WG
Sbjct: 172 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 231
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ +P++VN ++G + +SCG HT ++S+G L+T G +G
Sbjct: 232 WGRY--GNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 287
Query: 214 VLGHGDRKSVSIPREVESL 232
LGHGD + +PR+V++L
Sbjct: 288 QLGHGDFEDCLVPRKVQAL 306
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 92/164 (56%), Gaps = 3/164 (1%)
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
N+S+ N + +WG G+ G+LGHGD + +L+PT ++A + V CG TVA +
Sbjct: 59 NASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSK 118
Query: 317 SGH-VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
SG VY+ G +G+LG+ +D +P+ + L +++I+CG H +T + +V +
Sbjct: 119 SGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLS 177
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG+ NG LG G T D + P + A + ++K +A G + AI
Sbjct: 178 WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 221
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 329 GQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS-YHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG+ D +L P ++ + V + CG+ Y VA S +VY+WG G GRLGHG
Sbjct: 79 GQLGHGDTDDRLLPTKLSAFDGQDIVS-VTCGADYTVARSKSGKDVYSWGWGDFGRLGHG 137
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
D D P + AL+ ++K I+CG A+ +
Sbjct: 138 DPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 172/364 (47%), Gaps = 46/364 (12%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEY 138
++ACGG H + + G VF+ G G+LG G + L P + +E V+ G +
Sbjct: 77 SLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNH 135
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTA 196
H+CAVT G L+ WG + G LG G V P++V+ L V ++ G H+
Sbjct: 136 HSCAVTADGKLFAWGRNSS--GQLGLGKRAGKVVSTPRKVD-CLADARVKMVALGSEHSI 192
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHT 247
T G++ ++G G LGHG + S+ PR +++L G++ R A G+ H+
Sbjct: 193 ATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHS 252
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A + E G LF +G K G G +L PT V + P VACG
Sbjct: 253 ACIDE------------KGTLFIFGQ--KTEKGFGRSGDELRPTVVEEV--PFSEEVACG 296
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVL 366
T +T SG +Y+ GS G LG D + P ++ L K V +++CG H AV+
Sbjct: 297 GYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 356
Query: 367 TSKTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
S ++YTWG G + G+LGHG+ D P +VE K+ + ++CG N
Sbjct: 357 -SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNH 415
Query: 415 TAAI 418
T AI
Sbjct: 416 TGAI 419
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 20/232 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V WG G G LG G F + P+ +++ + ++ IA G H+A ++
Sbjct: 198 GEVLSWG-AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACID 256
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
++G +F +G+++ G G D L P +++ + E VACG YHTC VT SGDLY+W
Sbjct: 257 EKGTLFIFGQKT--EKGFGRSGDELRPTVVEEVPFS--EEVACGGYHTCVVTDSGDLYSW 312
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---- 208
G + G LG G P+ + L VS +SCG HTAV+ S G ++T+G
Sbjct: 313 G--SNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI-SGGDIYTWGWGGA 369
Query: 209 DGTF--------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+GTF G LGHG+ P VE K R V +CG HT A+ E
Sbjct: 370 NGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 421
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALV--------EPNFCRVACGHSLTVALTTSGHVYT 322
WG+GD GRLG G E++ PT + + +ACG + T+ LT SG V+
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G +GQLG + +E V E++ G++H +T+ +++ WG+ ++G+
Sbjct: 97 AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQ 156
Query: 383 LGHGDTDDR--NSPSLVEALKDKQVKSIACGTNFTAA 417
LG G + ++P V+ L D +VK +A G+ + A
Sbjct: 157 LGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIA 193
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 164/331 (49%), Gaps = 32/331 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-VLHPKLIDAL 125
P ++S V +ACG H L + G+++S+G + +LG G+D + V P +I L
Sbjct: 68 PTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGL 127
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-HWVPKRVNGPLEGIH 184
+ +++++ G YH+C +T G +Y WG G G LG G +V+ H P+R++ E
Sbjct: 128 ESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEE--GQLGFGEDVTKHETPERLDVDDE--- 182
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACG 243
V I+CG +HTA+VT+ G+L TFG+ G LG G D +P+ V+ ++G V ACG
Sbjct: 183 VVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACG 241
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A+ +V +T+G+G G+LGHG+ + +P R
Sbjct: 242 GAHTVAITGWLV-------------YTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVR 288
Query: 304 VA-CGHSLTVALTTSGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
A CG + T +T G ++T G +G+ LG + + SK VE+++CG
Sbjct: 289 SASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGG 348
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
H + T K + NG H +D+
Sbjct: 349 CHT-LATGKPSL------QNGNAAHDSSDEE 372
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 168/346 (48%), Gaps = 25/346 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +I+CG H +L+ G VF++G+ + G+LG G V P I +L + VACG
Sbjct: 27 VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT T SG +Y++ G N LG G + V LE V +S G +H+ V
Sbjct: 87 SHTLLATESGKIYSF--GCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSCV 144
Query: 198 VTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+T G ++ +G G G LG G D P ++ V ACG +HTA V
Sbjct: 145 LTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDD--EVVCIACGYYHTALVT----- 197
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ GKL T+G+ D+G+LG G D +P V +E + VACG + TVA+
Sbjct: 198 -------AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDG-IEGHVVSVACGGAHTVAI- 248
Query: 316 TSGHVYTMGSPVYGQL--GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T VYT G+ GQL GN P+++ + + V +CG H A++T + +++
Sbjct: 249 TGWLVYTFGNGSSGQLGHGNMLLQADTPHKIVWQ-KPTKVRSASCGENHTALVTDRGQLW 307
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQ--VKSIACGTNFTAA 417
T G G +G+L G+ + N +++ + V+ ++CG T A
Sbjct: 308 TCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLA 353
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 20/238 (8%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V ISCG HT+++ G++FTFGD +G LG G K V+ P ++SLK + + ACG
Sbjct: 27 VLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGR 86
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCR 303
HT E SGK++++G + +LG G D E PT + L
Sbjct: 87 SHTLLATE------------SGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKM 134
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSY 361
++ G + LT G VY G GQLG + + P R++ V IACG Y
Sbjct: 135 LSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLD---VDDEVVCIACGYY 191
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H A++T+ ++ T+G+ G+LG G DT D P +V+ + + V S+ACG T AI
Sbjct: 192 HTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACGGAHTVAI 248
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 24/239 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V++WG G +G LG G + P+ L+ V +V IACG H ALV
Sbjct: 149 GSVYLWGGGE-EGQLGFGEDVT--------KHETPERLD--VDDEVVCIACGYYHTALVT 197
Query: 93 KQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
G++ ++GE G+LG G D+ D PK++D + ++ VACG HT A+T +YT
Sbjct: 198 AGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEG-HVVSVACGGAHTVAIT-GWLVYT 255
Query: 152 WGDGTYNFGLLGHGNEVSHW-VPKRV--NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
+G+G+ G LGHGN + P ++ P + V S SCG HTA+VT GQL+T G
Sbjct: 256 FGNGSS--GQLGHGNMLLQADTPHKIVWQKPTK---VRSASCGENHTALVTDRGQLWTCG 310
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTV--RAACGVWHTAAVVEVMVGNSSSSNCSS 265
DG G L G+ + + S++ + V + +CG HT A + + N ++++ SS
Sbjct: 311 DGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLATGKPSLQNGNAAHDSS 369
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 3/116 (2%)
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEI 356
E ++CG T L G V+T G +GQLG P R++ L V ++
Sbjct: 24 EDKVLHISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIK-SLKAEKVHQV 82
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN-SPSLVEALKDKQVKSIACG 411
ACG H + T ++Y++G + +LG G D++ SP++++ L+ VK ++ G
Sbjct: 83 ACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAG 138
>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 151/315 (47%), Gaps = 22/315 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V ++ HAA V + GEVF+ G+ S GH + + P+L++AL + + VA G
Sbjct: 165 VIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 195
T +T G LYT G T+ G LGHG+ PK + LEG+ V I+ GP +
Sbjct: 225 LNFTVFLTRQGQLYTCGTNTH--GQLGHGDTQDRPTPKIIE-LLEGVGSVVQIAAGPSYV 281
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 253
VT G +++FG G+ LGHG++ PR +++ K + V + G H A+
Sbjct: 282 LAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALD-- 339
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SSG +++WG G G LGHGD+ K +P V L +V T
Sbjct: 340 ----------SSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFV 389
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
L G VY G +G LG P +D + RV L V +I+ G YH V+T++
Sbjct: 390 LVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQG 449
Query: 371 EVYTWGKGANGRLGH 385
+++ +G +LGH
Sbjct: 450 QMFGFGDNERAQLGH 464
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 133/281 (47%), Gaps = 24/281 (8%)
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIH 184
SNM V G YHT + D + G+ G+LGHG E + V R+ P +
Sbjct: 112 SNMQ---VTTGRYHTLLIR---DSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFP-SLAY 164
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACG 243
V +S H A V +G++FT GD + GH D + + PR VE+LKG+ + A G
Sbjct: 165 VIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVG 224
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFC 302
+ T + G+L+T G G+LGHGD + + P + L +
Sbjct: 225 LNFTVFLTR------------QGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVV 272
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSF-VEEIACGS 360
++A G S +A+T +G VY+ GS LG+ Q D P ++ K V ++ G
Sbjct: 273 QIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGD 332
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
H L S VY+WGKG G LGHGD D+ P+LV LK
Sbjct: 333 EHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLK 373
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 23/342 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
GR+ L+ + V+S G G LGHG ++ + I S + V+ H V
Sbjct: 119 GRYHTLLIRDSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAFV 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG+++T GD + +F GH + R+ L+G+ ++ G T +T GQ
Sbjct: 179 LQSGEVFTCGDNS-SF-CCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQ 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAVVEVMVGNSSSSN 262
L+T G T G LGHGD + P+ +E L+G+ V+ A G + AV +
Sbjct: 237 LYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTD---------- 286
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLTVALTTSGHV 320
+G ++++G G LGHG++ + P + + V+ G VAL +SG V
Sbjct: 287 --NGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFV 344
Query: 321 YTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
Y+ G G LG+ + D LP V L ++ VL VY +G
Sbjct: 345 YSWGKGYCGALGHGDEIDKTLPALVN-CLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMG 403
Query: 380 NGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G LG D +D P ++++L+ + V I+ G T +
Sbjct: 404 FGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVV 445
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 19/279 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ + + +A G + +QG++++ G + G+LGHG D PK+I+ L
Sbjct: 207 PRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLE 266
Query: 127 NM-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ ++ +A G + AVT +G +Y++G G+ N LGHG + + P+ + + IH
Sbjct: 267 GVGSVVQIAAGPSYVLAVTDNGVVYSFGSGS-NL-CLGHGEQHDEFRPRAIQTFRRKDIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +S G H + S+G ++++G G G LGHGD ++P V LK V+
Sbjct: 325 VVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 301
T +V+ G ++ +G G LG D+ + + P + +L +
Sbjct: 385 RKTFVLVD------------GGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHV 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
+++ G TV +T G ++ G QLG+ G L
Sbjct: 433 SQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCL 471
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 108/239 (45%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAV-VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G D PK +E V V IA G + V G V+S+G S LGHG D
Sbjct: 251 GDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQHDEF 310
Query: 118 HPKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P+ I +I +V + G+ H A+ SG +Y+WG G G LGHG+E+ +P
Sbjct: 311 RPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC--GALGHGDEIDKTLPAL 368
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
VN L+ + T V+ G ++ FG FG LG DR V PR ++SL
Sbjct: 369 VN-CLKSHLAVQVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ + + G++HT V + G++F +GD ++ +LGH L PT
Sbjct: 428 RARHVSQISTGLYHTVVVT------------NQGQMFGFGDNERAQLGHDTLRGCLQPT 474
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVVLDVQ--NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+A+++ D+ +++ G HA ++ G V+SWG+ G LGHG + D
Sbjct: 304 GEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDK 363
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 174
P L++ L + ++ + C V + G +G G FG LG + +S V +
Sbjct: 364 TLPALVNCLKS-HLAVQVCARKRKTFVLVDGG-SVYGFGWMGFGSLGFPDRGLSDKVMRP 421
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
RV L HVS IS G +HT VVT+ GQ+F FGD LGH + P E+
Sbjct: 422 RVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 18/236 (7%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
++ G +HT ++ + +++ G GVLGHG + + L
Sbjct: 116 VTTGRYHTLLIRDS-SVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSL------------ 162
Query: 248 AAVVEVMVG-NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVA 305
A V++V N ++ SG++FT GD GH D + P V AL +VA
Sbjct: 163 AYVIQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVA 222
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
G + TV LT G +YT G+ +GQLG+ D P +E V +IA G +V
Sbjct: 223 VGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVL 282
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL--KDKQVKSIACGTNFTAAI 418
+T VY++G G+N LGHG+ D P ++ KD V ++ G A+
Sbjct: 283 AVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVAL 338
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 164/346 (47%), Gaps = 27/346 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIELVAC- 135
+++IA G A+V K G VF+ G G+ G+G + V+ + ALS + I +VA
Sbjct: 504 IRDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAA 563
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGP 192
G H AV G +Y+WG YN G LG G+ +S P+ ++ E H+++ +
Sbjct: 564 NGCEHMLAVASDGAVYSWG---YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSY 620
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+AVV+S G+L FG G LG + P+ V+SL ACG++HT A+
Sbjct: 621 HHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT- 679
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV---EPNFCRVACGHS 309
S G+++++G D G+LG G VPT V + + V+CG+
Sbjct: 680 -----------SGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYY 728
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
TV ++ G + T G YGQLG D K + S ++ +CG YH +L S
Sbjct: 729 HTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSN 788
Query: 370 TEVYTWGKGANGRLGHGD----TDDRNSPSLVEALKDKQVKSIACG 411
V +G+ G+LG G + D P +L + +V IA G
Sbjct: 789 GRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAG 834
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 30/340 (8%)
Query: 45 GVLGGGLNRVGSC----FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
V GLN+ G C F ++ + P S +V+++ A G H V G V+SW
Sbjct: 522 AVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSW 581
Query: 101 GEESGGRLGHGVDSDVLH-PKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN 158
G G+LG G H P++ID+L +I A +H+ V+ +G+L +G +
Sbjct: 582 GYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG--MND 639
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG + P+ V+ L ++ ++CG +HT +TS G++++FG +G LG G
Sbjct: 640 CGQLGLDHTQHQHTPQLVDS-LSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLG 698
Query: 219 DRKSVSIPREVESLKGL---RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
+++ +P V++ G + V +CG +HT + E GKL TWG D
Sbjct: 699 HARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISE------------KGKLITWGRND 746
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-- 333
G+LG G K+ K V + +CG T+ L ++G V G GQLG
Sbjct: 747 YGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806
Query: 334 ---PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
P AD LP L+ V IA G Y +LT ++
Sbjct: 807 RTLPSADLPLP-VPSNSLANDEVVRIAAGFYSSYILTGRS 845
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 157/340 (46%), Gaps = 41/340 (12%)
Query: 96 EVFSWGEESGGRL--GH-GVDSDVLHPKLIDALSNMNI----ELVAC----GEYHTCAVT 144
E+FS G+ + G L GH S + H A + +I E++A G TC +
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAG 202
SG G+GT+ V P R L GI ++ ++ G H V S G
Sbjct: 530 KSGQC---GNGTFE-------ERVIIATPVRA---LSGIVINMVAAANGCEHMLAVASDG 576
Query: 203 QLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++++G G LG G S S PR ++SL+ + A +H +AVV
Sbjct: 577 AVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVS--------- 627
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
S+G+L +G D G+LG + + P V +L VACG T+A+T+ G VY
Sbjct: 628 --SNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVY 685
Query: 322 TMGSPVYGQLGNPQA-DGKLPNRVEGKLSKS--FVEEIACGSYHVAVLTSKTEVYTWGKG 378
+ G YGQLG A + K+P V+ L +S + ++CG YH ++ K ++ TWG+
Sbjct: 686 SFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRN 745
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G D +NS V ++K+ +CG T +
Sbjct: 746 DYGQLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLIL 785
>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
Length = 410
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 163/342 (47%), Gaps = 37/342 (10%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL-- 117
+++ +P+ +E+ L+V+ + G RH+A++ + G+++++G + G LGHG + DV
Sbjct: 36 IQIPKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFD 95
Query: 118 HPKLIDALSNMNIEL--VACGEYHTCAVTLSGDLYTWGDG----------TYNFGLLGHG 165
+P+L++ N ++ V GEYHT A+T G++YTWG G T G LGHG
Sbjct: 96 NPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHG 155
Query: 166 NEVSHWVPKRVN-GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
++ H+ PK+V+ I VS I G +HT ++ G L+T+G G FGVLG+
Sbjct: 156 DKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNSYSL 215
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
P + ++ + + E + + + G L+ WG D+G+LG G
Sbjct: 216 TPMLNDEFHIMKQEKPDLKIQKIDVADEY-----TGALMNDGTLYVWGKNDRGQLGTGSG 270
Query: 285 ------EAKLVPTCVAAL---VEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
E++ VP + L +P+ + G + + ++Y +G +
Sbjct: 271 IGIDMIESENVPIAITVLDKNDQPHLVKDFHPGQNTMIIRDDEDNIYKVGLKL------- 323
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
K N + K V +++CG H VL ++ ++ WG
Sbjct: 324 DYSPKQVNIFNEEFKKEDVTQLSCGRKHYCVLNNQNKLMVWG 365
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 112/243 (46%), Gaps = 40/243 (16%)
Query: 172 VPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI--P 226
+PK + +E ++V ++ G H+AV+T G+L+TFG G +G LGHG K V P
Sbjct: 38 IPKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNP 97
Query: 227 REVESL--KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK-------- 276
+ VE + + V G +HTAA+ S G+++TWG G K
Sbjct: 98 QLVEFFEKRNKKIVEVGLGEYHTAAL------------TSDGEVYTWGYGGKQTLFNWMI 145
Query: 277 ----GRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G LGHGDK+ P V + N R+ G T+A++ +G +YT G ++G
Sbjct: 146 TQEVGGLGHGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGV 205
Query: 331 LGNPQADGKLPNRV--EGKLSKSF-----VEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
LGN L + E + K +++I + L + +Y WGK G+L
Sbjct: 206 LGNASNSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVWGKNDRGQL 265
Query: 384 GHG 386
G G
Sbjct: 266 GTG 268
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-D 283
IP+++E+ L + G+ H+A + E GKL+T+G G+ G LGHG +
Sbjct: 42 IPQKMEAFDKLNVKKLNIGLRHSAVITE------------DGKLYTFGSGNWGPLGHGSE 89
Query: 284 KEAKLV-PTCVAALVEPN--FCRVACGHSLTVALTTSGHVYTMG------------SPVY 328
K+ K P V + N V G T ALT+ G VYT G +
Sbjct: 90 KDVKFDNPQLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEV 149
Query: 329 GQLGNPQADGK---LPNRVEGKLSKSF-VEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G LG+ D K P +V+ + V I G YH ++ ++YTWG+G G LG
Sbjct: 150 GGLGH--GDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLG 207
Query: 385 HGDTDDRNSPSLVEALK-------DKQVKSIACGTNFTAAIC----LHKW 423
+ +P L + D +++ I +T A+ L+ W
Sbjct: 208 NASNSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVW 257
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKL--PNRVE 345
+P + A + N ++ G + +T G +YT GS +G LG+ + D K P VE
Sbjct: 42 IPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLVE 101
Query: 346 --GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDR 391
K +K VE + G YH A LTS EVYTWG G G LGHGD
Sbjct: 102 FFEKRNKKIVE-VGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHGDKKHH 160
Query: 392 NSPSLVEALKDKQVK--SIACGTNFTAAIC----LHKWVSGV 427
P V+ + +K I G T AI L+ W G+
Sbjct: 161 FFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGL 202
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 172/364 (47%), Gaps = 46/364 (12%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEY 138
++ACGG H + + G VF+ G G+LG G + L P + +E V+ G +
Sbjct: 77 SLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNH 135
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTA 196
H+CAVT G L+ WG + G LG G V P++V+ L V ++ G H+
Sbjct: 136 HSCAVTADGKLFAWGRNSS--GQLGLGKRAGKVVSTPRKVD-CLADSRVKMVALGSEHSI 192
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHT 247
T G++ ++G G LGHG + S+ PR +++L G++ R A G+ H+
Sbjct: 193 ATTEEGEVLSWGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHS 252
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A + E G LF +G K G G +L PT V + P VACG
Sbjct: 253 ACIDE------------KGTLFIFGQ--KTEKGFGRSGDELRPTVVEEV--PFSEEVACG 296
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVL 366
T +T SG +Y+ GS G LG D + P ++ L K V +++CG H AV+
Sbjct: 297 GYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI 356
Query: 367 TSKTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
S ++YTWG G + G+LGHG+ D P +VE K+ + ++CG N
Sbjct: 357 -SGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNH 415
Query: 415 TAAI 418
T AI
Sbjct: 416 TGAI 419
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 117/232 (50%), Gaps = 20/232 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V WG G G LG G F + P+ +++ + ++ IA G H+A ++
Sbjct: 198 GEVLSWG-AAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACID 256
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
++G +F +G+++ G G D L P +++ + E VACG YHTC VT SGDLY+W
Sbjct: 257 EKGTLFIFGQKT--EKGFGRSGDELRPTVVEEVPFS--EEVACGGYHTCVVTDSGDLYSW 312
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---- 208
G + G LG G P+ + L VS +SCG HTAV+ S G ++T+G
Sbjct: 313 G--SNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVI-SGGDIYTWGWGGA 369
Query: 209 DGTF--------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+GTF G LGHG+ P VE K R V +CG HT A+ E
Sbjct: 370 NGTFFEEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFE 421
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALV--------EPNFCRVACGHSLTVALTTSGHVYT 322
WG+GD GRLG G E++ PT + + +ACG + T+ LT SG V+
Sbjct: 37 WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96
Query: 323 MGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G +GQLG + +E V E++ G++H +T+ +++ WG+ ++G+
Sbjct: 97 AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSGQ 156
Query: 383 LGHGDTDDR--NSPSLVEALKDKQVKSIACGTNFTAA 417
LG G + ++P V+ L D +VK +A G+ + A
Sbjct: 157 LGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIA 193
>gi|224128193|ref|XP_002329104.1| predicted protein [Populus trichocarpa]
gi|222869773|gb|EEF06904.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 153/316 (48%), Gaps = 22/316 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVAC 135
+V ++ HAA V + GEVF+ G+ S GH + + P+L++AL ++ + V+
Sbjct: 164 NVVQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSV 223
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWH 194
G T +T G LYT G T+ G LGHG+ + PK + LEGI V I+ GP +
Sbjct: 224 GLNFTVFLTRQGQLYTCGSNTH--GQLGHGDTLDRPTPKIIE-LLEGIGPVVQIAAGPSY 280
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVE 252
VT G +++FG G+ LGHG++ PR +++ K + V + G H A+
Sbjct: 281 VLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALD- 339
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
SSG +++WG G G LGHGD+ K +P+ V L + T
Sbjct: 340 -----------SSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARKRKTF 388
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQAD---GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
L G VY G +G LG P D + RV L V +I+ G YH V+T++
Sbjct: 389 VLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRVSQISTGLYHTVVVTNQ 448
Query: 370 TEVYTWGKGANGRLGH 385
+++ +G +LGH
Sbjct: 449 GQMFGFGDNERVQLGH 464
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 191
V G YHT + D + G+ G+LGHG E + V R+ P +V +S
Sbjct: 116 VTTGRYHTLLIR---DSSVYSCGSSLCGVLGHGAETTQCVAFTRIRFP-SLANVVQVSAS 171
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
H A V +G++FT GD + GH D + + PR VE+LK + + + G+ T +
Sbjct: 172 HNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQVSVGLNFTVFL 231
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVACGH 308
G+L+T G G+LGHGD + P + L + P ++A G
Sbjct: 232 TR------------QGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGP-VVQIAAGP 278
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSF-VEEIACGSYHVAVL 366
S +A+T +G VY+ G LG+ Q D P ++ K V ++ G H L
Sbjct: 279 SYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVAL 338
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
S VY+WGKG G LGHGD D+ PSLV LK +
Sbjct: 339 DSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSR 375
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 141/296 (47%), Gaps = 25/296 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ + + ++ G + +QG++++ G + G+LGHG D PK+I+ L
Sbjct: 207 PRLVEALKAVSCKQVSVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLE 266
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ + +A G + AVT +G +Y++G G+ NF LGHG + + P+ + + IH
Sbjct: 267 GIGPVVQIAAGPSYVLAVTDNGVVYSFGYGS-NF-CLGHGEQHDEFQPRAIQTFRRKDIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +S G H + S+G ++++G G G LGHGD ++P V LK V+A
Sbjct: 325 VVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPSLVNCLKSRLAVQACARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 301
T +V+ G ++ +G G LG D+ E + P + +L
Sbjct: 385 RKTFVLVD------------DGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSLRAHRV 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+++ G TV +T G ++ G QLG+ G L + ++ FV+E A
Sbjct: 433 SQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCL------QPTEIFVQETA 482
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAV-VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G +D PK +E + V IA G + V G V+S+G S LGHG D
Sbjct: 251 GDTLDRPTPKIIELLEGIGPVVQIAAGPSYVLAVTDNGVVYSFGYGSNFCLGHGEQHDEF 310
Query: 118 HPKLIDALSNMNIELV--ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P+ I +I +V + G+ H A+ SG +Y+WG G G LGHG+E+ +P
Sbjct: 311 QPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYC--GALGHGDEIDKTLPSL 368
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
VN + V + + T V+ G ++ FG FG LG DR + V PR ++SL
Sbjct: 369 VNCLKSRLAVQACA-RKRKTFVLVDDGSVYGFGCMGFGSLGFPDRDITEKVMTPRVLDSL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ R + + G++HT V + G++F +GD ++ +LGH L PT
Sbjct: 428 RAHRVSQISTGLYHTVVVT------------NQGQMFGFGDNERVQLGHDTLRGCLQPT 474
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++ G +HT ++ + +++ G GVLGHG + + L
Sbjct: 115 QVTTGRYHTLLIRDS-SVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSL----------- 162
Query: 247 TAAVVEVMVG-NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRV 304
A VV+V N ++ SG++FT GD GH D + P V AL + +V
Sbjct: 163 -ANVVQVSASHNHAAFVLQSGEVFTCGDNSSFCCGHKDTNRPIFRPRLVEALKAVSCKQV 221
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHV 363
+ G + TV LT G +YT GS +GQLG+ D P +E V +IA G +V
Sbjct: 222 SVGLNFTVFLTRQGQLYTCGSNTHGQLGHGDTLDRPTPKIIELLEGIGPVVQIAAGPSYV 281
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+T VY++G G+N LGHG+ D P ++ + K + +
Sbjct: 282 LAVTDNGVVYSFGYGSNFCLGHGEQHDEFQPRAIQTFRRKDIHVV 326
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 84/175 (48%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVVLDVQ--NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+A+++ D+ +++ G HA ++ G V+SWG+ G LGHG + D
Sbjct: 304 GEQHDEFQPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDK 363
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE--VSHWVPK 174
P L++ L + + + AC V L D +G G FG LG + +
Sbjct: 364 TLPSLVNCLKS-RLAVQACARKRKTFV-LVDDGSVYGFGCMGFGSLGFPDRDITEKVMTP 421
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
RV L VS IS G +HT VVT+ GQ+F FGD LGH + P E+
Sbjct: 422 RVLDSLRAHRVSQISTGLYHTVVVTNQGQMFGFGDNERVQLGHDTLRGCLQPTEI 476
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 198/429 (46%), Gaps = 54/429 (12%)
Query: 12 SLSSAVSSSSQGSGHDDGDALG-DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKAL 70
++SS SS+ G+++ +F WG+ G L G + F K ++ PK L
Sbjct: 521 NISSMKSSNVNVQNEGQGNSIKCYIFAWGKNES-GELSFGNQK--QPFYNKPEN--PKNL 575
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG--HGVDSDVLHPKLIDALSNM 128
+ + + I+ H+A ++ GE++ G G+LG +++ ++I +
Sbjct: 576 DRIYI---KQISTSQNHSACISANGELYVCGSALHGKLGLEELTMANINKFQMIPIFKGI 632
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-----LEGI 183
+ VACG+YHT A+T + +Y+WG GT + V +R P L
Sbjct: 633 KVLQVACGDYHTLALTDTDQVYSWG-GT-----------LHKKVGQRSGKPAPIQQLNKK 680
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFG----DGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
V + CG +H+A +T G ++T+G D G LG G K + P +++ +G + V+
Sbjct: 681 GVIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVK 740
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA----- 294
+CG +HT A+ S +LF WG G+ G LG E + V
Sbjct: 741 VSCGQFHTMALT------------SENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYN 788
Query: 295 -----ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLS 349
L E + + CG T+ LT +G++Y+ G GQLG ++ + ++ L+
Sbjct: 789 ILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLT 848
Query: 350 KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
K + +IA G H L+ + +++ G GA G+LG GD + R + V +L K +I+
Sbjct: 849 KKKIIKIAAGWNHSLALSDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATIS 908
Query: 410 CGTNFTAAI 418
G + + A+
Sbjct: 909 AGGDHSWAV 917
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 71/242 (29%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWG----EESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
V + CG H+A + + G++++WG + + G+LG G D+ +P+ + I V
Sbjct: 682 VIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKV 741
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV-------NGPLEGI--- 183
+CG++HT A+T +L+ WG G FG LG + P RV N E I
Sbjct: 742 SCGQFHTMALTSENELFGWGAGE--FGELGTSKH--EYTPIRVKVNFNQYNILYENILFE 797
Query: 184 -HVSSISCGPWHTAVVTSAG---------------------------------------- 202
+ +I CG HT ++T+ G
Sbjct: 798 NSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIKIAA 857
Query: 203 ------------QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
+F G G G LG GD +S +I V SL G T + G H+ AV
Sbjct: 858 GWNHSLALSDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAV 917
Query: 251 VE 252
++
Sbjct: 918 LD 919
>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 186/397 (46%), Gaps = 46/397 (11%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKM-DSSLPKALESAVVLDVQNI---ACGGRHAA 89
++ WG GT +G LG G K+ D LP+ L + ++I ACGG H
Sbjct: 15 QIWSWGAGT-EGQLGTG----------KLEDEYLPQLLHLPFLSSAESISTLACGGAHVI 63
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ G VF+WG + G+LGHG + LHPK + +L + I V+ G H+ V+ G L
Sbjct: 64 ALTSGGRVFTWGRGTTGQLGHGEMLNSLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLL 123
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+T GDG+ FG LG GN S P +V+ V+ I+CG H+ V+ + Q++ FG
Sbjct: 124 FTCGDGS--FGQLGQGNYRSQSTPVKVD-YFANNFVNQIACGMRHSLVLLNGNQVYGFGS 180
Query: 210 GTFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G G LG KS+++P+ L+ ++ V + H+AA+ + G
Sbjct: 181 GKRGQLGISRDKTKSINLPQVTCGLEDVQIVSISANGDHSAAI------------SADGH 228
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
L+TWG G G +A +++L + A G + + LT V +G
Sbjct: 229 LYTWGRGFAGA-----SDANFPQLSLSSL---RCTKAALGWNHGLLLTGDEEVLMLGGNY 280
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE--VYTWGKGANGRLGH 385
+G L + + + +R E + E I V + + E TWG G +G+LG
Sbjct: 281 HGVLCDLEKMSAVKHRPEDSPGTALNEVIGLDGVKVVKIAAGAEHSALTWGWGEHGQLGL 340
Query: 386 GDTDDRNSPSLVEALKDKQVK----SIACGTNFTAAI 418
G+T+D+ P V + D Q K ++ CG+ FT AI
Sbjct: 341 GNTNDQTIPQTVSLIPDIQNKEASLNVYCGSGFTFAI 377
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 146/359 (40%), Gaps = 84/359 (23%)
Query: 13 LSSAVSSSSQGSGHDDGDAL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKA 69
LSSA S S+ G AL G VF WG GT G LG G ++S PK
Sbjct: 46 LSSAESISTLACGGAHVIALTSGGRVFTWGRGT-TGQLG---------HGEMLNSLHPKP 95
Query: 70 LESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN 129
+ S + +++ G H+ V+ G +F+ G+ S G+LG G P +D +N
Sbjct: 96 VSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQLGQGNYRSQSTPVKVDYFANNF 155
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-----LEGIH 184
+ +ACG H+ + +Y +G G G LG +S K +N P LE +
Sbjct: 156 VNQIACGMRHSLVLLNGNQVYGFGSGKR--GQLG----ISRDKTKSINLPQVTCGLEDVQ 209
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ SIS H+A +++ G L+T+G G G + P+ SL LR +AA G
Sbjct: 210 IVSISANGDHSAAISADGHLYTWGRGFAGA------SDANFPQ--LSLSSLRCTKAALG- 260
Query: 245 WHTAAVV----EVMV--GNSSSSNCSSGKL------------------------------ 268
W+ ++ EV++ GN C K+
Sbjct: 261 WNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPGTALNEVIGLDGVKVVKIA 320
Query: 269 -------FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF------CRVACGHSLTVAL 314
TWG G+ G+LG G+ + +P V+ + P+ V CG T A+
Sbjct: 321 AGAEHSALTWGWGEHGQLGLGNTNDQTIPQTVSLI--PDIQNKEASLNVYCGSGFTFAI 377
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 166/352 (47%), Gaps = 50/352 (14%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G H+ L+ G V S G+ S G+LG P+ I AL +++ LV+CG+ H+ AV
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62
Query: 144 TLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
G ++ WG + G LG G + + ++PK++ L I + ++CG +H+ ++ G
Sbjct: 63 CHKGRVFAWGAASE--GQLGIGELKETTFIPKKIKT-LADIKIIQVACGHYHSLALSEDG 119
Query: 203 QLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 120 QVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----------- 168
Query: 262 NCSSGKLFTWGDGDKGRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG F WG + G+L G+ + P V AL + ++CG+ T LT G
Sbjct: 169 -SLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDG 227
Query: 319 HVYTMGSPVYGQLGNPQADGK----LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
V+T G YGQLG+ K L R+EG V +I CGSYH T Y
Sbjct: 228 KVFTFGDNSYGQLGHDSTAEKRGPQLVERIEG-----LVSQIDCGSYH-------TLAYV 275
Query: 375 WGKGANGRLGHGDTDDRNSP---SLVEA-----------LKDKQVKSIACGT 412
+ G G G R+SP +L E+ L+D QVK I GT
Sbjct: 276 YTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGT 327
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V+L S S H G VF WG +G LG G +K +
Sbjct: 43 ALETLHVALVSCGKEHSLAVCHK-----GRVFAWG-AASEGQLGIG--------ELKETT 88
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
+PK +++ + + +ACG H+ +++ G+VFSWG+ S G+LG G + P+ +
Sbjct: 89 FIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVR 148
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++LSG + WG L G+ V + P V G L+
Sbjct: 149 SLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLV-GALKT 207
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD ++G LGH P+ VE ++GL + + C
Sbjct: 208 LSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVS-QIDC 266
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 267 GSYHTLAYV 275
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 133/264 (50%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
P+ + + L V ++CG H+ V +G VF+WG S G+LG G + PK I L
Sbjct: 38 PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTL 97
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH 184
+++ I VACG YH+ A++ G +++WG ++ G LG G E S P+RV LEGI
Sbjct: 98 ADIKIIQVACGHYHSLALSEDGQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 154
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVS--IPREVESLKGLRTVRAA 241
++ ++ G H+ ++ +G F +G G L G+ V P V +LK L V +
Sbjct: 155 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFIS 214
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+GD G+LGH K P V +E
Sbjct: 215 CGYEHTAVLTQ------------DGKVFTFGDNSYGQLGHDSTAEKRGPQLVER-IEGLV 261
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ CG T+A + T+G V + G
Sbjct: 262 SQIDCGSYHTLAYVYTTGQVVSFG 285
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 23/236 (9%)
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H+ ++ S G + + GD + G LG P + +L+ L +CG H+ AV
Sbjct: 3 GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHS 309
C G++F WG +G+LG G+ KE +P + L + +VACGH
Sbjct: 63 ------------CHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHY 110
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAV 365
++AL+ G V++ G +GQLG + P++ + +S + ++A G H
Sbjct: 111 HSLALSEDGQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFA 167
Query: 366 LTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
L+ + WG G+L G+ R P LV ALK V I+CG TA +
Sbjct: 168 LSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 145/288 (50%), Gaps = 32/288 (11%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ + +I+ G ++A V G V++WG G+LG G +P++I +LSN +I +AC
Sbjct: 230 IKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIAC 289
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV-NGPLEGIHVSSISCGPWH 194
G H A++ SGDLYTWG G FG LGHG S PK+V + + ++ G
Sbjct: 290 GRQHMAAISKSGDLYTWGLGV--FGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANF 347
Query: 195 TAVVTSAGQLFTFGDGTFGVLG------------HGDRKS---VSIPREVESLKGLRTVR 239
T V+ G+LF+FG G +G LG +GDR S+P++V++L+ ++ +
Sbjct: 348 TMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRK 407
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG HT AV + ++TWG G G LG GD++ +LVP V +L
Sbjct: 408 VACGHLHTIAV------------TTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGE 455
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGK 347
V+ G T+ + +S T + Y QL N Q G + V+ K
Sbjct: 456 EISSVSGGEKHTLIVRSSDT--TTFAFDYKQLVNDQKTGDIAFLVQNK 501
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 190/448 (42%), Gaps = 90/448 (20%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
GDV+ WG G +G LG + +L KALE ++ V ACG H+ +
Sbjct: 52 FGDVYSWGRGK-EGELGHPQK------AMTAPPALIKALEHERIVKV---ACGNYHSLAL 101
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACG-EYHTCAVTLSGDL 149
G+V+ W G+L H +D+ K L M I+ A H+ ++ L+G+
Sbjct: 102 TDTGKVYQW-----GQL-HEIDATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEK 155
Query: 150 YTWGDGTYNFGLLGH-----------------------------------GNEVSHWVPK 174
+ + + + +L G++V V K
Sbjct: 156 AAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDK 215
Query: 175 RVNGPL------EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
P+ + I + IS G ++A VTS G ++T+G G LG GDR PR
Sbjct: 216 NQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRV 275
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
+ SL V ACG H AA+ SG L+TWG G G+LGHG ++ L
Sbjct: 276 IRSLSNKSIVNIACGRQHMAAI------------SKSGDLYTWGLGVFGQLGHGKLKSLL 323
Query: 289 VPTCVAALVEPN--FCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-------------- 332
P V + +VA G + T+A++ +G +++ G YGQLG
Sbjct: 324 HPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNG 383
Query: 333 --NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
+ LP +V+ L V ++ACG H +T+ +VYTWG G++G LG GD
Sbjct: 384 DRDDHLKYSLPKQVKA-LESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDRKF 442
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ P V +L +++ S++ G T +
Sbjct: 443 QLVPQRVPSLSGEEISSVSGGEKHTLIV 470
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 151/299 (50%), Gaps = 37/299 (12%)
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS-NMNIELVACGEYHTCAVTLSG 147
A+V+ Q E E+SG ++G VD + + P L+D S ++ I ++ G ++ AVT +G
Sbjct: 192 AIVDTQQE--QQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTG 249
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
++YTWG G LG G+ H P RV L + +I+CG H A ++ +G L+T+
Sbjct: 250 NVYTWGFNEK--GQLGLGDRWYHGNP-RVIRSLSNKSIVNIACGRQHMAAISKSGDLYTW 306
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G G FG LGHG KS+ P++V + + V+ A G T AV E +
Sbjct: 307 GLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSE------------N 354
Query: 266 GKLFTWGDGDKGRLG------------HGDKEAKL---VPTCVAALVEPNFCRVACGHSL 310
G+LF++G G+ G+LG +GD++ L +P V AL +VACGH
Sbjct: 355 GELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLH 414
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T+A+TT VYT G G LG +L P RV LS + ++ G H ++ S
Sbjct: 415 TIAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPS-LSGEEISSVSGGEKHTLIVRS 472
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 144/338 (42%), Gaps = 37/338 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V S+G G+LG V+ D L P +I L I+ +ACGE H+ AVT GD+Y+WG G
Sbjct: 3 VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LGH + P + LE + ++CG +H+ +T G+++ +G
Sbjct: 63 E--GELGHPQKAMTAPPALIKA-LEHERIVKVACGNYHSLALTDTGKVYQWGQ------- 112
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
E+++ K GV +VE+ S +S + L + +G+K
Sbjct: 113 ---------LHEIDATKS--------GVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEK 155
Query: 277 GRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
+ ++ PT + + V GS V G++ +
Sbjct: 156 AAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKV-GEIVD 214
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ P V+ + +I+ G + A +TS VYTWG G+LG GD +
Sbjct: 215 K--NQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGN 272
Query: 394 PSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGV 427
P ++ +L +K + +IACG AAI L+ W GV
Sbjct: 273 PRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGV 310
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 46 VLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
V+ G+ + G V D P ++ ++ IACG H+ V + G+V+SWG
Sbjct: 3 VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK 62
Query: 105 GGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G LGH + P LI AL + I VACG YH+ A+T +G +Y WG
Sbjct: 63 EGELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWG 111
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 135 bits (339), Expect = 1e-28, Method: Composition-based stats.
Identities = 117/412 (28%), Positives = 201/412 (48%), Gaps = 53/412 (12%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
DA+G +F WG+ T +G +G + + K+ + PK + V ++ACG +H+
Sbjct: 1497 DAVGVMFSWGQNT-EGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSV 1555
Query: 90 LVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+ G V +WG+ S +LG G S V P I AL+ NI+ V+CG HT A+ G
Sbjct: 1556 AITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALT--NIQSVSCGSEHTLALDYIG 1613
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+++WG+G GLLGHGNE PK + L+G++V I CG H+ V+T Q++++
Sbjct: 1614 QVFSWGNG--EGGLLGHGNEDVCPSPKIIEA-LKGLNVDFIVCGGLHSLVLTKNRQVYSW 1670
Query: 208 GDGTFGVLG------HGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G G LG ++ ++ P+ V+ +L+G+ ++ A G H+ A+
Sbjct: 1671 GRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALA--------- 1721
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK-------EAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+G+++ WG G++G G + E +L+P +E FC CG + +
Sbjct: 1722 ---LNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNK--IEKIFC---CGLNDSNQ 1773
Query: 314 LTTSGHVYTMGSPVYGQLGN--PQ------ADGKLPNRVEGKLSKSFVEEIACGSYH-VA 364
L + S L PQ D +P +++ + V ++CG H +A
Sbjct: 1774 LGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDC-FHQIPVLHVSCGHNHSLA 1832
Query: 365 VLTSKTE---VYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGT 412
++ + T+ ++ WG +G+LG G+T +S P + L+D S+ACG+
Sbjct: 1833 LVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGS 1884
Score = 119 bits (298), Expect = 5e-24, Method: Composition-based stats.
Identities = 90/297 (30%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 147 GDLYTWGDGTYNFGLLGH---------GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
G +++WG T G +G+ ++ PK + PL+ V+S++CG H+
Sbjct: 1500 GVMFSWGQNTE--GQMGNVYDPKQNLLSKKIKVNFPKLIV-PLKDTIVTSVACGYQHSVA 1556
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRK--SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T AG + +GD + LG G++ SV P + +L +++V +CG HT A+ +
Sbjct: 1557 ITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSV--SCGSEHTLALDYI-- 1612
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G++F+WG+G+ G LGHG+++ P + AL N + CG ++ LT
Sbjct: 1613 ----------GQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLT 1662
Query: 316 TSGHVYTMGSPVYGQLG-------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+ VY+ G GQLG N + P RV+G L V +IA G H L
Sbjct: 1663 KNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALAL 1722
Query: 369 KTEVYTWGKGANGRLGHG---DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
+VY WG NG++G G DT P L+ L +K K CG N + + L K
Sbjct: 1723 NGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKL-NKIEKIFCCGLNDSNQLGLEK 1778
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 71/250 (28%), Positives = 111/250 (44%), Gaps = 32/250 (12%)
Query: 200 SAGQLFTFGDGTFGVLGH---------GDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
+ G +F++G T G +G+ + V+ P+ + LK ACG H+ A+
Sbjct: 1498 AVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAI 1557
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV--PTCVAALVEPNFCRVACGH 308
+G + WGD +LG G+K V PT + AL N V+CG
Sbjct: 1558 T------------YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALT--NIQSVSCGS 1603
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T+AL G V++ G+ G LG+ D ++ L V+ I CG H VLT
Sbjct: 1604 EHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTK 1663
Query: 369 KTEVYTWGKGANGRLGHGD---TDDR---NSPSLVEA-LKDKQVKSIACGTNFTAAICLH 421
+VY+WG+ G+LG T+++ +P V+ L+ V IA G + A+ L+
Sbjct: 1664 NRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALN 1723
Query: 422 KWVSGVDQSM 431
V G +M
Sbjct: 1724 GQVYGWGYNM 1733
Score = 81.6 bits (200), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 246 HTAAVVEVMVGNSS--SSNCSSGKLFTWGDGDKGRLGH-GDKEAKLV--------PTCVA 294
+ +V+++ + S S + G +F+WG +G++G+ D + L+ P +
Sbjct: 1478 QSGNIVQILEKDYSTFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIV 1537
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKL---SKS 351
L + VACG+ +VA+T +G V G + QLG + K P+ V + +
Sbjct: 1538 PLKDTIVTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGE---KSPSSVPFPTPIPALT 1594
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
++ ++CGS H L +V++WG G G LGHG+ D SP ++EALK V I CG
Sbjct: 1595 NIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG 1654
Score = 42.0 bits (97), Expect = 0.99, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHA-ALV---NKQGEVFSWGEESGGRLG---HGVDSD 115
D +PK ++ + V +++CG H+ ALV K +F+WG G+LG G +S
Sbjct: 1805 DVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSS 1864
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAV 143
V P+ I L ++ +ACG YH+ V
Sbjct: 1865 V--PRPITYLQDVTTYSMACGSYHSLVV 1890
Score = 40.0 bits (92), Expect = 3.6, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD----LYTWGDGTYNFGLLGHGNEVS 169
+DV PK +D + + V+CG H+ A+ ++ L+ W G + G LG G
Sbjct: 1804 TDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAW--GMHKHGQLGIGETGQ 1861
Query: 170 HWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ R L+ + S++CG +H+ VV +
Sbjct: 1862 NSSVPRPITYLQDVTTYSMACGSYHSLVVAN 1892
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 181/389 (46%), Gaps = 51/389 (13%)
Query: 62 MDSSLPKALESAVV-LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHP 119
+DS A+ SA+ + +ACGG H + + VF+ G G+LG V S + P
Sbjct: 67 LDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDP 126
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVN 177
+ L + +I ++ G YH+ A+T+ G+LY WG + G LG G + + V P +V
Sbjct: 127 LEVSGL-DKDILHISAGYYHSAAITVDGELYMWGKNSS--GQLGLGKKAARVVRVPTKVE 183
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFG------------DGTFGVLGHGDRKSVSI 225
L GI + S++ G H+ VT G++ ++G FG+L S
Sbjct: 184 -ALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGIL---RSNSEFT 239
Query: 226 PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
PR ++ L+G++ A G+ H+A E +G F +G+ ++G G
Sbjct: 240 PRLIKELEGIKVTNVAAGLLHSACTDE------------NGSAFMFGEKSINKMGFGGVR 287
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRV 344
P+ ++ + P VACG T +T G +YT GS G LG P RV
Sbjct: 288 NATTPSIISEV--PYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRV 345
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRN 392
EG +S V +++CG H A + S V+TWG G + G+LGHG D
Sbjct: 346 EGPFLESTVSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYA 404
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAICLH 421
P++V+ K+ + I+CG N TAA+ H
Sbjct: 405 RPAMVDLGKNVRAVHISCGFNHTAAVLEH 433
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 142/331 (42%), Gaps = 29/331 (8%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
WG GRLG G P + ALS+ +I VACG HT +T + ++ G +
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFA--TGLNDC 111
Query: 160 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG + SH + P V+G + I IS G +H+A +T G+L+ +G + G LG G
Sbjct: 112 GQLGVSDVKSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYMWGKNSSGQLGLG 169
Query: 219 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
+ + V +P +VE+L G+ A G H+ AV + G S G
Sbjct: 170 KKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGGGGSGRLGHGHQS 226
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG---- 332
G ++ P + L VA G + +G + G ++G
Sbjct: 227 SLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGV 286
Query: 333 ----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
P ++P + EE+ACG YH V+T E+YTWG NG LG T
Sbjct: 287 RNATTPSIISEVP----------YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDST 336
Query: 389 DDRNSPSLVEA-LKDKQVKSIACGTNFTAAI 418
+SP VE + V ++CG TAAI
Sbjct: 337 YVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 134/320 (41%), Gaps = 74/320 (23%)
Query: 1 MKAMAMDAFRVS-LSSAVSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGL------- 51
+K+ AMD VS L + S G H + G++++WG+ + G LG G
Sbjct: 119 VKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNS-SGQLGLGKKAARVVR 177
Query: 52 --NRVGSCFGVKMDSSLPKALESAVVLD-------------------------------- 77
+V + G+ + S + S V D
Sbjct: 178 VPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSE 237
Query: 78 -------------VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
V N+A G H+A ++ G F +GE+S ++G G + P +I
Sbjct: 238 FTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISE 297
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ E VACG YHTC VT G+LYTW G+ G LG + P RV GP
Sbjct: 298 VPYA--EEVACGGYHTCVVTRGGELYTW--GSNENGCLGTDSTYVSHSPVRVEGPFLEST 353
Query: 185 VSSISCGPWHTAVVTSAGQLFTFG----DGTFGV--------LGHGDRKSVSIPREVESL 232
VS +SCG HTA + S +FT+G GTF V LGHG + P V+
Sbjct: 354 VSQVSCGWKHTAAI-SDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLG 412
Query: 233 KGLRTVRAACGVWHTAAVVE 252
K +R V +CG HTAAV+E
Sbjct: 413 KNVRAVHISCGFNHTAAVLE 432
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
C S V+ + K WG G GRLG G+ D + +P++ AL D + ++ACG T
Sbjct: 37 CCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHT 94
>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 173/374 (46%), Gaps = 57/374 (15%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI------------------------- 130
++ SWG S G+LG G++ L+P + LS NI
Sbjct: 60 QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHNLALAPGQLPSFSGDNQDSGDDGS 119
Query: 131 -EL-VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
EL ++CG +H+ ++ ++G ++ WG G + G LG G+E +VP +N LE V I
Sbjct: 120 FELGISCGLFHS-SLLVNGKVWIWGKG--DGGRLGFGHENPVFVPT-LNSRLE--SVRCI 173
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+ G H+ + + GQ+FT+G G FG LGH +PR VE R A HTA
Sbjct: 174 ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTA 233
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPTCVAALVEPNF 301
A+ E SG+++TWG +GD + +P V AL P
Sbjct: 234 AITE------------SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAP-V 280
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
V+CG T+AL G ++ G+ +LG G + L + + +I CG Y
Sbjct: 281 AAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGY 340
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H VLT +V +WG G +G+LGH + P +++AL DK+V IAC + +AA+
Sbjct: 341 HSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAVTAE 400
Query: 420 --LHKWVSGVDQSM 431
L+ W + D +
Sbjct: 401 GKLYMWGNAKDSQL 414
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 159/338 (47%), Gaps = 38/338 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+IWG+G G + G N V +L LES V+ IA GG H+ +N
Sbjct: 137 GKVWIWGKGDGGRLGFGHENPV-------FVPTLNSRLES-----VRCIALGGLHSVALN 184
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VF+WG G LGH V L P+L++ I+ +A HT A+T SG++YTW
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTW 244
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDG G NE +P RV P V+++SCG + T + G+L+
Sbjct: 245 GRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAP---VAAVSCGGFFTMALGVDGKLWN 301
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G T LG G+ P+ V SL+ ++ CG +H+ V+ G+ G
Sbjct: 302 WGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSL----VLTGD--------G 349
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
K+ +WG G G+LGH + + VP + AL + +AC S + A+T G +Y G+
Sbjct: 350 KVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLYMWGNA 409
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFV-EEIACGSYHV 363
QLG P LP + F+ E+ G YHV
Sbjct: 410 KDSQLGVP----GLPEVQTSPVEVIFLTEDDGLGPYHV 443
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 161/356 (45%), Gaps = 33/356 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H++L+ G+V+ WG+ GGRLG G ++ V P L L + + +A G H+
Sbjct: 124 ISCGLFHSSLL-VNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLES--VRCIALGGLHS 180
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+ G ++TWG G FG LGH VP+ V G G + I+ HTA +T
Sbjct: 181 VALNALGQVFTWGYG--GFGALGHSVYHRELVPRLVEGSWRG-RIKHIATSGAHTAAITE 237
Query: 201 AGQLFTFG-------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+G+++T+G G G + +SIP V +L +CG + T A+
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPA-PVAAVSCGGFFTMAL--- 293
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
GKL+ WG LG G+ P V +L + ++ CG ++
Sbjct: 294 ---------GVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLV 344
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
LT G V + G +GQLG+ + RV L+ V IAC A +T++ ++Y
Sbjct: 345 LTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLY 404
Query: 374 TWGKGANGRLG-HGDTDDRNSPSLV------EALKDKQVKSIACGTNFTAAICLHK 422
WG + +LG G + + SP V + L V S+A G + + L +
Sbjct: 405 MWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLRR 460
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 36/296 (12%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ALG VF WG G G G LG V +P+ +E + +++IA G H A
Sbjct: 184 NALGQVFTWGYG-GFGALG---------HSVYHRELVPRLVEGSWRGRIKHIATSGAHTA 233
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLH-------PKLIDALSNMNIELVACGEYHTCA 142
+ + GEV++WG + G + P + AL + V+CG + T A
Sbjct: 234 AITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALP-APVAAVSCGGFFTMA 292
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+ + G L+ WG T NF LG GN + W PK V LE + I CG +H+ V+T G
Sbjct: 293 LGVDGKLWNWGANT-NFE-LGRGNNIGGWEPKPVP-SLEDTPIIQIVCGGYHSLVLTGDG 349
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++ ++G G G LGH ++ +PR +++L R + AC G+SS++
Sbjct: 350 KVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIAC------------CGSSSAAV 397
Query: 263 CSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+ GKL+ WG+ +LG G E + P V L E + + H L+VA+ S
Sbjct: 398 TAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDD--GLGPYHVLSVAVGAS 451
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 176/369 (47%), Gaps = 48/369 (13%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEY 138
++ACGG H + + G VF+ G G+LG G + ++ P + +++ A G +
Sbjct: 74 SLACGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISA-GNH 132
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTA 196
H+CAVT G+L+ WG + G LG G V V P++V+ L + V ++ G H+
Sbjct: 133 HSCAVTADGELFVWGKNSS--GQLGLGKGVGKVVSTPRKVD-YLADVRVRMVALGSEHSI 189
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHT 247
VT G+ ++G G LGHG + S+ PR +++L G++ R A G+ H+
Sbjct: 190 AVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHS 249
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VAC 306
A + E G LF +G + G + + PT V E F VAC
Sbjct: 250 ACIDE------------KGTLFIFGQKTEKVFGRSNDAPR--PTVVE---EIQFSEEVAC 292
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G T ALT G +Y+ GS G LG + P + L K V +++CG H AV
Sbjct: 293 GGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAV 352
Query: 366 LTSKTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
++ + ++YTWG G + G+LGHG+ D P +VE ++ + ++CG N
Sbjct: 353 ISGE-DIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFN 411
Query: 414 FTAAICLHK 422
T AI +K
Sbjct: 412 HTGAIFEYK 420
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 100 WGEESGGRLGHGVDSDVLHPK---LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
WG GRLG G +P A + +ACG HT +T SG ++ G
Sbjct: 39 WGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVFA--TGL 96
Query: 157 YNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+FG LG G+ +H V P V G G V IS G H+ VT+ G+LF +G + G L
Sbjct: 97 NDFGQLGIGSSTTHIVDPIEVTG--FGEKVVQISAGNHHSCAVTADGELFVWGKNSSGQL 154
Query: 216 GHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
G G K VS PR+V+ L +R A G H+ AV E G+ +WG
Sbjct: 155 GLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTE------------GGEALSWGA 202
Query: 274 GDKGRLGHGDKEAKL---------VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
GRLGHG K + L P + L R+A G + + G ++ G
Sbjct: 203 AGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 262
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G D P VE F EE+ACG YH LT ++Y+WG NG LG
Sbjct: 263 QKTEKVFGRSN-DAPRPTVVE---EIQFSEEVACGGYHTCALTDGGDLYSWGSNENGCLG 318
Query: 385 HGDTDDRNSPSLVEA-LKDKQVKSIACGTNFTAAI 418
G T SP ++ + L V ++CG TA I
Sbjct: 319 LGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI 353
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 34/298 (11%)
Query: 31 ALGDVFIWGEGT-GDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
A G++F+WG+ + G LG G+ +V S P+ ++ + V+ +A G H+
Sbjct: 139 ADGELFVWGKNSSGQLGLGKGVGKV---------VSTPRKVDYLADVRVRMVALGSEHSI 189
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDALSNMNIELVACGEYHT 140
V + GE SWG GRLGHG S +L P+LI L + I+ +A G H+
Sbjct: 190 AVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHS 249
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS-SISCGPWHTAVVT 199
+ G L+ +G T + G N+ P V E I S ++CG +HT +T
Sbjct: 250 ACIDEKGTLFIFGQKTEK--VFGRSNDAPR--PTVV----EEIQFSEEVACGGYHTCALT 301
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVV--EVMVG 256
G L+++G G LG G V P + S L L + +CG HTA + ++
Sbjct: 302 DGGDLYSWGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVISGEDIYTW 361
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+N G F G G+LGHG+ P V V+CG + T A+
Sbjct: 362 GWGGAN---GTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGAI 416
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 20/232 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+ WG G G LG G FG+ P+ +++ + ++ IA G H+A ++
Sbjct: 195 GEALSWGA-AGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACID 253
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
++G +F +G+++ G +D P +++ + E VACG YHTCA+T GDLY+W
Sbjct: 254 EKGTLFIFGQKTEKVFGR--SNDAPRPTVVEEIQFS--EEVACGGYHTCALTDGGDLYSW 309
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---- 208
G+ G LG G P+ + L + VS +SCG HTAV+ S ++T+G
Sbjct: 310 --GSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI-SGEDIYTWGWGGA 366
Query: 209 DGTF--------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+GTF G LGHG+ P VE + R V +CG HT A+ E
Sbjct: 367 NGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGAIFE 418
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 37/343 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H LV G+++ +G + G+LG S + P + AL + + L ACG +HT
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G LY+ G + G LG G+ + ++ + +S G +A +T
Sbjct: 102 LVYTEQGKLYSSGGNSE--GQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTV 159
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G LG P++V++ K + + +CG +H+A V +
Sbjct: 160 DGKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAWI--SCGYYHSAFVTQ-------- 209
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN--------FCRVACGHSLTV 312
G+L+T+G+ + G+LG L P + +P V+CG T+
Sbjct: 210 ----DGELYTFGEPENGKLG-------LPPDKIKKHKKPQRVLGLSGKVTMVSCGGEHTI 258
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
A+T VYT G +GQLG+ + +P V+ L+K + + CG H A++T K
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDA-LTKKKIRYVTCGENHTAIITEKG 316
Query: 371 EVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+YT+G G +G+LG G+ + N P L V+S+ACG
Sbjct: 317 LLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 143/302 (47%), Gaps = 31/302 (10%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEG 182
L N ++CG+ HT VT +G LY + G+ N+G LG G+ +S P V L+
Sbjct: 34 LKNDKPARISCGDEHTVLVTGNGKLYVF--GSNNWGQLGVEAGSAISK--PTCVKA-LKS 88
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
V +CG HT V T G+L++ G + G LG GD + +E+ ++
Sbjct: 89 EKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLS 148
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-- 300
+ +A + V GKLF WGD +G+LG K C V+
Sbjct: 149 AGSNMSAALTV-----------DGKLFMWGDNSEGQLGL----EKGTIYCTPQKVDTGKP 193
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIA 357
++CG+ + +T G +YT G P G+LG P K P RV G K V ++
Sbjct: 194 IAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSGK--VTMVS 251
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG H +T K EVYT+G G G+LGHG + + P V+AL K+++ + CG N TA
Sbjct: 252 CGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTA 310
Query: 417 AI 418
I
Sbjct: 311 II 312
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/241 (32%), Positives = 119/241 (49%), Gaps = 22/241 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ ++ G +A + G++F WG+ S G+LG + P+ +D + I ++CG
Sbjct: 144 IKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKVD--TGKPIAWISCGY 201
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YH+ VT G+LYT+G+ L H P+RV G L G V+ +SCG HT
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLG-LSG-KVTMVSCGGEHTIA 259
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
VT +++TFG G FG LGHG IP+ V++L + CG HTA + E
Sbjct: 260 VTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITE---- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEPNFCRVACG--HSLTV 312
G L+T+GDG G+LG G++ + VP + ++ VACG H L
Sbjct: 315 --------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
Query: 313 A 313
A
Sbjct: 367 A 367
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SG LFT+G K A+ +P+ L R++CG TV +T +G +Y G
Sbjct: 13 SGALFTFGKS---------KFAENIPSKFW-LKNDKPARISCGDEHTVLVTGNGKLYVFG 62
Query: 325 SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
S +GQLG P V+ S+ V ACG +H V T + ++Y+ G + G+L
Sbjct: 63 SNNWGQLGVEAGSAISKPTCVKALKSEKVV-LAACGRHHTLVYTEQGKLYSSGGNSEGQL 121
Query: 384 GHGDTDDRNSPSLVEALKDK-QVKSIACGTNFTAAICL 420
G GDT R S + + ++K ++ G+N +AA+ +
Sbjct: 122 GLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTV 159
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 11 VSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKAL 70
+ LS V+ S G H +V+ +G G G LG G ++ +PKA+
Sbjct: 241 LGLSGKVTMVSCGGEHTIAVTEKEVYTFGLGQF-GQLGHGT--------FIFETHIPKAV 291
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNM 128
++ ++ + CG H A++ ++G ++++G+ G+LG G + ++ P L
Sbjct: 292 DALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKF 351
Query: 129 NIELVACGEYH 139
++ VACG H
Sbjct: 352 TVQSVACGGCH 362
>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
Length = 596
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 168/328 (51%), Gaps = 28/328 (8%)
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
+S G+ S G+LG D P+ I AL++++++LV+CG+ H+ AV G ++ WG G+
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSE 60
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
+G E+S ++P ++ L GI + +SCG +H+ ++ G +F++G + G LG
Sbjct: 61 GQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118
Query: 218 G-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + +S +IP++V+SL+G+ + A G H+ A+ +G F WG
Sbjct: 119 GKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL------------SLTGTSFGWGSNRS 166
Query: 277 GRL---GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG- 332
G+L G+ KE P + AL + ++CG+ T LT G V+T G GQL
Sbjct: 167 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQP 226
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGAN--GRLGHGDTD 389
+P++ + P +EG + V +I C SYH +A + + +V + G+G + H +
Sbjct: 227 SPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAP 284
Query: 390 DRNSPSL----VEALKDKQVKSIACGTN 413
NS E L D +VK I G +
Sbjct: 285 AENSDITCLLAAEDLVDIEVKDIFAGAH 312
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 132/264 (50%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDAL 125
P+ +++ L V ++CG H+ V +G+VF WG S G+LG G ++ P I AL
Sbjct: 22 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKAL 81
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHWVPKRVNGPLEGIH 184
+ + I V+CG YH+ A++ G +++WG + G LG G N S +P++V LEGI
Sbjct: 82 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSE--GQLGLGKNSRSQAIPQKVKS-LEGIP 138
Query: 185 VSSISCGPWHTAVVTSAGQLFTFG---DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
++ ++ G H+ ++ G F +G G + G+ ++ + P + +LK L + +
Sbjct: 139 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYIS 198
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + E G++FT+G G+L + + P + +
Sbjct: 199 CGYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGRV 245
Query: 302 CRVACGHSLTVA-LTTSGHVYTMG 324
++ C T+A + T+G V ++G
Sbjct: 246 SQIECASYHTIAYVYTTGQVVSLG 269
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ +G LG G K S +P +++ + + ++CG H+ ++
Sbjct: 50 GKVFPWGAGS-EGQLGIG--------EFKEISFMPTKIKALAGIKIIQVSCGHYHSLALS 100
Query: 93 KQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G VFSWG S G+LG G +S P+ + +L + + VA G H+ A++L+G +
Sbjct: 101 EDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFG 160
Query: 152 WGDGTYNFGLLGHGNEVSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG L GN+V + K G L+ + V ISCG HTAV+T GQ+FTFG
Sbjct: 161 WGSNRSG-QLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGN 219
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
+ G L R P+ +E + G R + C +HT A V
Sbjct: 220 SSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYV 259
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 21/221 (9%)
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
++ GD ++G LG +S P +++L L +CG H+ AV C
Sbjct: 1 YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAV------------CH 48
Query: 265 SGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
GK+F WG G +G+LG G+ KE +PT + AL +V+CGH ++AL+ GHV++
Sbjct: 49 KGKVFPWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSW 108
Query: 324 GSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQLG N ++ +P +V+ L + ++A G H L+ + WG +
Sbjct: 109 GRNSEGQLGLGKNSRSQA-IPQKVKS-LEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRS 166
Query: 381 GRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+L G+ + P + ALK+ V I+CG TA +
Sbjct: 167 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 207
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 47 LGGGLNRVGSCF----GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGE 102
G G NR G VK P ++ + L V I+CG H A++ ++G+VF++G
Sbjct: 159 FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG 218
Query: 103 ESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDG 155
S G+L S P+LI+ + + + C YHT A V +G + + G G
Sbjct: 219 NSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECASYHTIAYVYTTGQVVSLGRG 271
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 17/277 (6%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H + V SWG G+LGHG D L P + A +I V CG +T
Sbjct: 17 ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 76
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + SG D+Y+WG G +FG LGHG+ ++P + L+G+ + ISCG H VT
Sbjct: 77 VARSKSGKDVYSWGWG--DFGRLGHGDPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVT 133
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
++ ++G G LG G K +P+++ + +G+R A G H+ A+ E
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE------- 186
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G L+ WG G G LG GD +L+P V + V+CG T+++++SG
Sbjct: 187 -----DGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGG 240
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEI 356
+YT G YGQLG+ + L R LS + ++
Sbjct: 241 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 138/282 (48%), Gaps = 19/282 (6%)
Query: 129 NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
++ L++ G HT A+ + +WG G G LGHG+ +P +++ +G + S+
Sbjct: 13 HVLLISAGASHTVALLTGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLS-AFDGQDIVSV 69
Query: 189 SCGPWHTAVVTSAGQ-LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+CG +T + +G+ ++++G G FG LGHGD + IP + +L+GLR + +CG H
Sbjct: 70 TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC 129
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
AV K+ +WG G LG G + VP + A VA G
Sbjct: 130 LAVT------------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAG 177
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVL 366
+VA+T G +Y G YG LG + +L P +V + + ++CG H +
Sbjct: 178 AEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISI 235
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+S +YT G G+LGHGD +D P V+AL DK + +
Sbjct: 236 SSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 277
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 131/268 (48%), Gaps = 27/268 (10%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG-E 96
WG G DG LG G D LP L + D+ ++ CG + +K G +
Sbjct: 36 WGRGE-DGQLG---------HGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKD 85
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG GRLGHG SD+ P I AL + I+ ++CG+ H AVT+ + +W G
Sbjct: 86 VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSW--GR 143
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ EGI + ++ G H+ +T G L+ +G G +G LG
Sbjct: 144 NQNGELGLGTTKDSHVPQKIL-AFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLG 202
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GD IP +V ++ G + V +CG HT ++ SSG L+T G
Sbjct: 203 LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISI------------SSSGGLYTHGWSKY 249
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRV 304
G+LGHGD E LVP V AL + +V
Sbjct: 250 GQLGHGDFEDCLVPRKVQALSDKLISQV 277
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WG G R+G G D +P + + L ++ I+CG H V
Sbjct: 85 DVYSWGWGD--------FGRLG--HGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 134
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+ +V SWG G LG G D P+ I A + I++VA G H+ A+T GDLY WG
Sbjct: 135 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 194
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ +P++VN ++G + +SCG HT ++S+G L+T G +G
Sbjct: 195 WGRY--GNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 250
Query: 214 VLGHGDRKSVSIPREVESL 232
LGHGD + +PR+V++L
Sbjct: 251 QLGHGDFEDCLVPRKVQAL 269
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 4/172 (2%)
Query: 250 VVEVMVGNSSSSNCSSGKLF-TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
V+ + G S + +G + +WG G+ G+LGHGD + +L+PT ++A + V CG
Sbjct: 14 VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGA 73
Query: 309 SLTVALTTSGH-VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
TVA + SG VY+ G +G+LG+ +D +P+ + L +++I+CG H +
Sbjct: 74 DYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAV 132
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
T + +V +WG+ NG LG G T D + P + A + ++K +A G + AI
Sbjct: 133 TMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 184
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIA 357
P+ ++ G S TVAL T V + G GQLG+ D +L P ++ + V +
Sbjct: 12 PHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVS-VT 70
Query: 358 CGS-YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG+ Y VA S +VY+WG G GRLGHGD D P + AL+ ++K I+CG
Sbjct: 71 CGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCL 130
Query: 417 AICL 420
A+ +
Sbjct: 131 AVTM 134
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
E S V I+ G+ H L + V +WG+G +G+LGHGDTDDR P+ + A +
Sbjct: 6 EKSASPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQD 65
Query: 405 VKSIACGTNFTAA 417
+ S+ CG ++T A
Sbjct: 66 IVSVTCGADYTVA 78
>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
Length = 560
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 189/414 (45%), Gaps = 56/414 (13%)
Query: 28 DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
D + +F WG DG L G + + PKA++ VQ I+ G H
Sbjct: 10 DDQQITYLFAWGRNK-DGEL---------SIGNQKKCNAPKAVQGLKNQTVQLISSGSNH 59
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPK--LIDALSNMNIELVACGEYHTCAVTL 145
+ +V + G++F G G+LG + +PK L+ A+ + + VA G+YHT +
Sbjct: 60 SGIVTQDGQLFICGSALHGKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLD 119
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
+G +Y WG GT + L + P R+ + I I CG +H+A +++ G L+
Sbjct: 120 NGQVYAWG-GTLHKKLGSKAGK-----PARIETLKQTI--VQIGCGDFHSAALSANGDLY 171
Query: 206 TFG----DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
T+G D G LGHG V P+ V+ V+ +CG +H A+ +
Sbjct: 172 TWGGGGRDYNRGQLGHGHLNDVETPQIVKD----NIVKFSCGGYHMMALDK--------- 218
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-------LVEPNFCR---------VA 305
G+L++WG G G G G+ + L+P V +++ F + ++
Sbjct: 219 ---DGELWSWGSGMYGETGQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEIS 275
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G ++ L+ G VY G +GQLG + + ++ +S + +IA G H V
Sbjct: 276 LGGHHSLLLSNKGIVYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIV 335
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
LTS ++VYT G G+LG GD + R + + L+ +++K + G N + A+
Sbjct: 336 LTSHSDVYTCGHNQAGQLGVGDYESRTQYTRINFLEQRRIKQLFAGGNHSWALI 389
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 161/346 (46%), Gaps = 44/346 (12%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
+F+WG G L G PK + L N ++L++ G H+ VT G L+ G
Sbjct: 17 LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSAL 76
Query: 157 YNFGLLGHGNEVSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ G LG + PK + ++G+ V+ ++ G +HT + GQ++ +G L
Sbjct: 77 H--GKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG--- 272
G K P +E+LK V+ CG +H+AA+ ++G L+TWG
Sbjct: 135 GSKAGK----PARIETLKQ-TIVQIGCGDFHSAAL------------SANGDLYTWGGGG 177
Query: 273 -DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
D ++G+LGHG P +V+ N + +CG +AL G +++ GS +YG+
Sbjct: 178 RDYNRGQLGHGHLNDVETPQ----IVKDNIVKFSCGGYHMMALDKDGELWSWGSGMYGET 233
Query: 332 GNPQ-ADGKLPNRVEGKLSK---------------SFVEEIACGSYHVAVLTSKTEVYTW 375
G + D LP +V+ ++ S ++EI+ G +H +L++K VY
Sbjct: 234 GQGEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYAC 293
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
G +G+LG T+++N LV + K + IA G N + + H
Sbjct: 294 GYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSH 339
>gi|293332153|ref|NP_001168691.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|223950263|gb|ACN29215.1| unknown [Zea mays]
gi|414884497|tpg|DAA60511.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 483
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 147/317 (46%), Gaps = 26/317 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V NI+ HAA V + GEVF+ G+ S GHG V + P ++AL + + VA G
Sbjct: 156 VINISASHNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATG 215
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN---GPLEGIHVSSISCGPW 193
T +T G +YT G T+ G LGHG+ + PK + GP + V I+ G
Sbjct: 216 LSFTVILTRDGQVYTCGSNTH--GQLGHGDTIDRATPKLIELFEGPTQ---VVQIAAGAS 270
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVV 251
+T VT G + +FG T LGHGD+ +PR ++S K + VR + G H A+
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALD 330
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ G ++TWG G G LGHGD+ K P + +L +V T
Sbjct: 331 AL------------GHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKT 378
Query: 312 VALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V G +G LG +D + RV L +V +I+ G YH +T+
Sbjct: 379 FVLTDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAVTN 438
Query: 369 KTEVYTWGKGANGRLGH 385
K V+ +G +LG
Sbjct: 439 KGIVFGFGDNERAQLGQ 455
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 135/276 (48%), Gaps = 21/276 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 191
VA G YHT V D + G+ G+LGHG + + RV+ P V +IS
Sbjct: 107 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLS-RVINISAS 162
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAV 250
H A VT +G++FT GD + GHG+ +++ P +VE+LKG+ + A G+ T +
Sbjct: 163 HNHAAFVTESGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVATGLSFTVIL 222
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCRVACGHS 309
G+++T G G+LGHGD + P + P ++A G S
Sbjct: 223 TR------------DGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGAS 270
Query: 310 LTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG-KLSKSFVEEIACGSYHVAVLT 367
T A+T G V++ GS LG+ Q D LP ++ K V ++ G H L
Sbjct: 271 YTFAVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALD 330
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
+ VYTWG+G G LGHGD +D+ SP L+ +LK +
Sbjct: 331 ALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQ 366
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 158/350 (45%), Gaps = 39/350 (11%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVD-------SDVLHPKLIDALSNMNIELVACGE 137
GR+ L+ V+S G G LGHG D S V P L ++ ++
Sbjct: 110 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVIN------ISASH 163
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLL-GHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWH 194
H VT SG+++T GD N L GHG EV + P +V L+GI ++ G
Sbjct: 164 NHAAFVTESGEVFTCGD---NSSLCCGHG-EVGRTIFRPMQVEA-LKGIPCKQVATGLSF 218
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG-LRTVRAACGVWHTAAVVEV 253
T ++T GQ++T G T G LGHGD + P+ +E +G + V+ A G +T AV +
Sbjct: 219 TVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTFAVTD- 277
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLT 311
G + ++G LGHGD+ +L+P + + N RV+ G
Sbjct: 278 -----------DGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHA 326
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
VAL GHVYT G G LG+ + K + G L ++ VLT +
Sbjct: 327 VALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGS 386
Query: 372 V--YTW-GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V + W G G+ G L G +D P ++E+L+D V I+ G T A+
Sbjct: 387 VVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQISTGLYHTVAV 436
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 128/277 (46%), Gaps = 15/277 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P +E+ + + +A G ++ + G+V++ G + G+LGHG D PKLI+
Sbjct: 198 PMQVEALKGIPCKQVATGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFE 257
Query: 127 N-MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ +A G +T AVT G ++++G T NF LGHG++ +P+ + IH
Sbjct: 258 GPTQVVQIAAGASYTFAVTDDGTVHSFGSCT-NF-CLGHGDQHDELLPRAIQSFKRRNIH 315
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +S G H + + G ++T+G G G LGHGD + P + SLKG V+ C
Sbjct: 316 VVRVSAGDEHAVALDALGHVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQ-VCAR 374
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTW-GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
V+ ++ S F W G G G L G + + P + +L + +
Sbjct: 375 KRKTFVL---------TDEGSVVAFGWMGFGSLGFLDRGTSDKVMRPRVLESLQDHYVSQ 425
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
++ G TVA+T G V+ G QLG G L
Sbjct: 426 ISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCL 462
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 16/224 (7%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWH 246
++ G +HT +V + +++ G GVLGHG + S L R + + H
Sbjct: 107 VATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVSFPSLSRVINISASHNH 165
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVA 305
A V E SG++FT GD GHG+ + P V AL +VA
Sbjct: 166 AAFVTE------------SGEVFTCGDNSSLCCGHGEVGRTIFRPMQVEALKGIPCKQVA 213
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVA 364
G S TV LT G VYT GS +GQLG+ D P +E + V +IA G+ +
Sbjct: 214 TGLSFTVILTRDGQVYTCGSNTHGQLGHGDTIDRATPKLIELFEGPTQVVQIAAGASYTF 273
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+T V+++G N LGHGD D P +++ K + + +
Sbjct: 274 AVTDDGTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVV 317
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 49 GGLNRVGSC------FGVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSW 100
G ++ GSC G + D LP+A++S + V ++ G HA ++ G V++W
Sbjct: 279 GTVHSFGSCTNFCLGHGDQHDELLPRAIQSFKRRNIHVVRVSAGDEHAVALDALGHVYTW 338
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNF 159
G G LGHG ++D P+LI +L V + T +T G + +G G +
Sbjct: 339 GRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSVVAFGWMGFGSL 398
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G L G P RV L+ +VS IS G +HT VT+ G +F FGD LG
Sbjct: 399 GFLDRGTSDKVMRP-RVLESLQDHYVSQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEY 457
Query: 220 RKSVSIPREVESLKGLRTVRAA 241
+ P E+ K + + A
Sbjct: 458 IRGCLKPTEIMFQKSIEDIPIA 479
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 159/325 (48%), Gaps = 21/325 (6%)
Query: 97 VFSWGEESGGRLGHG-VDSDVLHPKLIDALSNM-NIELVACGEYHTCAVTLSGDLYTWGD 154
++ WG G LG G ++ D + + N+ V GE HT +T SG++++ G+
Sbjct: 1 MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ LGH + + P++V G L+ ++ ISCG HT GQLF +G + G
Sbjct: 61 N--DLDQLGHKKQRTK--PEKVEG-LDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQ 115
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG + + +P+ ++SL V+ +CG H+ A+ ++G+L++WG
Sbjct: 116 LGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALT------------NNGELYSWGGN 162
Query: 275 DKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G+LG G + E + PT + +L+ +ACG + + AL+ SG +Y G YGQLG
Sbjct: 163 YDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGL 222
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ KL L V+ IACG A L++ V+T G G G+LGHG T +
Sbjct: 223 NDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL 282
Query: 394 PSLVEALKDKQVKSIACGTNFTAAI 418
P + L V ++CG T A+
Sbjct: 283 PRKIMELMGSTVTQVSCGKRHTLAL 307
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 142/267 (53%), Gaps = 16/267 (5%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K + P+ +E + I+CGG H N+ G++F WG +S G+LG + L
Sbjct: 66 LGHKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQPL 125
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
PK+I +L+ +I ++CG+ H+ A+T +G+LY+WG G Y+ G LG G + +
Sbjct: 126 -PKIIKSLATFHIVQISCGKNHSLALTNNGELYSWG-GNYD-GQLGLGMRSEYEKQPTLI 182
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L GI ++ I+CG H+ ++ +G ++ +G T+G LG D ++ P ++++L+ +R
Sbjct: 183 KSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRV 242
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
ACG + S+ + G +FT G G G+LGHG +++P + L+
Sbjct: 243 KYIACG------------EDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELM 290
Query: 298 EPNFCRVACGHSLTVALTTS-GHVYTM 323
+V+CG T+AL S G VY+
Sbjct: 291 GSTVTQVSCGKRHTLALVPSRGRVYSF 317
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 147/301 (48%), Gaps = 20/301 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V + G H ++ K GEVFS G +LGH P+ ++ L I ++CG
Sbjct: 35 NVSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCG 92
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A G L+ WG ++ G LG N + +PK + L H+ ISCG H+
Sbjct: 93 GNHTLAFNEWGQLFGWGSDSH--GQLGF-NGTTQPLPKIIKS-LATFHIVQISCGKNHSL 148
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T+ G+L+++G G LG G R P ++SL G+ ACG H+ A+
Sbjct: 149 ALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFAL----- 203
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG ++ WG G+LG D+E KL PT + L +ACG + L+
Sbjct: 204 -------SKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLS 256
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYT 374
G V+T G+ +YGQLG+ ++ R +L S V +++CG H +A++ S+ VY+
Sbjct: 257 ADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVYS 316
Query: 375 W 375
+
Sbjct: 317 F 317
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 15/214 (7%)
Query: 50 GLNRVGSCFGVKMDSS-----------LPKALESAVVLDVQNIACGGRHAALVNKQGEVF 98
N G FG DS LPK ++S + I+CG H+ + GE++
Sbjct: 98 AFNEWGQLFGWGSDSHGQLGFNGTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELY 157
Query: 99 SWGEESGGRLGHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
SWG G+LG G+ S+ P LI +L + I +ACG H+ A++ SG +Y WG TY
Sbjct: 158 SWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTY 217
Query: 158 NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LG +E + P ++ L I V I+CG +A +++ G +FT G G +G LGH
Sbjct: 218 --GQLGLNDEENKLHPTQLKT-LRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGH 274
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
G + +PR++ L G + +CG HT A+V
Sbjct: 275 GSTSNEILPRKIMELMGSTVTQVSCGKRHTLALV 308
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 98/176 (55%), Gaps = 13/176 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG G DG LG G+ P ++S + + + IACG H+ ++
Sbjct: 154 GELYSWG-GNYDGQLGLGMRSEYE--------KQPTLIKSLLGIPIAFIACGSNHSFALS 204
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G ++ WG+ + G+LG + + LHP + L ++ ++ +ACGE + ++ G ++T
Sbjct: 205 KSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTC 264
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
G G Y G LGHG+ + +P+++ L G V+ +SCG HT A+V S G++++F
Sbjct: 265 GAGMY--GQLGHGSTSNEILPRKI-MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/354 (31%), Positives = 164/354 (46%), Gaps = 44/354 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD++IWG+G G R+G FG + +P ++ IA GG H+ +
Sbjct: 50 GDLWIWGKGDG--------GRLG--FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALT 99
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
QG+VF+WG G LGH V + L P+ +D + I +A HT A+T SG+LY W
Sbjct: 100 HQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMW 159
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
GDG G NE VP +V + V+S+SCG + T +T GQL+ +
Sbjct: 160 GREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNW 217
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G + LG GD P V SL+G+R + ACG +H+ A+ E GK
Sbjct: 218 GANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGK 265
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
+ +WG G G+LG + VPT + AL + +A G S + A+T G ++ G+
Sbjct: 266 VLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAK 325
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSFVEE-----------IACGSYHVAVLTSKT 370
QLG P LP + +F+ E I+ G+ H L S++
Sbjct: 326 DFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSRS 375
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 148/307 (48%), Gaps = 24/307 (7%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P IDA S+ ++CG +H+ +T+ GDL+ WG G + G LG G E S +VP +N
Sbjct: 23 PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNP 78
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
E + I+ G H+ +T G +FT+G G FG LGH +PR V+ +
Sbjct: 79 LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPT 291
A HTAA+ E SG+L+ WG +GD + VP+
Sbjct: 139 AIATSGTHTAAITE------------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPS 186
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS 351
V AL P V+CG T+ALT G ++ G+ +LG G L
Sbjct: 187 KVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGV 245
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+ +IACG YH LT + +V +WG G +G+LG ++ P+ +EAL DK++ IA G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305
Query: 412 TNFTAAI 418
+ +AAI
Sbjct: 306 GSSSAAI 312
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 35/355 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H+ L G+++ WG+ GGRLG G ++ V P L +I +A G H+
Sbjct: 37 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+T GD++TWG G FG LGH VP+RV+ + +S+I+ HTA +T
Sbjct: 96 VALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 152
Query: 201 AGQLFTFG-------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+G+L+ +G G G + +S+P +V++L + +CG + T A+ +
Sbjct: 153 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 210
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G+L+ WG LG GD P V +L ++ACG ++A
Sbjct: 211 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259
Query: 314 LTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LT G V + G +GQLG+ + K+P +E K V IA G A +T E+
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVF-IASGGSSSAAITDGGEL 318
Query: 373 YTWGKGANGRLG-HGDTDDRNSPSLVEALKDK------QVKSIACGTNFTAAICL 420
+ WG + +LG G + + +P V L ++ +V SI+ G + A+CL
Sbjct: 319 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGA--SHALCL 371
>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 45/368 (12%)
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
+ +V +AC +A ++K G++++WG G LG+G ++ P L++ L +++ + VA
Sbjct: 59 IQNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVA 118
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE------------- 181
CG YH A+T G LYTWG+ + G LGH + +P R +
Sbjct: 119 CGNYHMAAITRDGQLYTWGNQDH--GKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVK 176
Query: 182 -GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP-REVESLKGLRTVR 239
V +S G T +++ G +++ G G+LG+ + + + +++ +LK + +
Sbjct: 177 LNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSFKQISNLKNIIQID 236
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+ + S + S G +F WG G+LG P + L P
Sbjct: 237 SGT--------------DFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGL--P 280
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSF---VEE 355
+ +CG AL+ G +YT G GQLG P + D P+++ SF +++
Sbjct: 281 KIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQDIPTPHKI------SFDHNIDK 334
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSPSLVEALKDKQVKSIACGTNF 414
++CG HV ++ S ++Y G+G G+LG G +T+ NS L + V IACG +
Sbjct: 335 VSCGQAHVGII-SNNKLYMHGRGKEGQLGRGSETESPNSSRYSPLLVLENVLKIACGGSH 393
Query: 415 TAAICLHK 422
+ AI K
Sbjct: 394 SFAIVNQK 401
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 16/339 (4%)
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
++ V Q ++++WG + G+LG G P+L+ N+ VAC + A+ SG
Sbjct: 23 SSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QNVLFVACKSSVSAAIDKSG 79
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
LYTWG FGLLG+G + +P V L+ + ++CG +H A +T GQL+T+
Sbjct: 80 KLYTWGRS--KFGLLGNGQVENINIPTLVE-CLKHLDFKYVACGNYHMAAITRDGQLYTW 136
Query: 208 GDGTFGVLGHGDRKSVSIP--REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS- 264
G+ G LGH +P + E K L + + V V +V +G+ + S
Sbjct: 137 GNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSD 196
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G +++ G KG LG+ K A+ + + ++ N ++ G +VAL + G+++ G
Sbjct: 197 DGNVYSVGLNKKGILGYETKNAEELSFKQISNLK-NIIQIDSGTDFSVALDSDGNMFAWG 255
Query: 325 SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
S +GQLG P + P +++G L K +++ +CG + L++ +YTWG G +G+L
Sbjct: 256 SNYFGQLGTPSPSVIQTPQQIKG-LPK--IKQFSCGEQFIGALSADGVLYTWGFGGDGQL 312
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
G D +P + D + ++CG I +K
Sbjct: 313 GTPSKQDIPTPHKISF--DHNIDKVSCGQAHVGIISNNK 349
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 41/321 (12%)
Query: 128 MNIELVACGEYHTCAVTLSGD-LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ I + T + S + LY WG NFG LG GN +S + P+ V P++ +V
Sbjct: 10 LKIAFIGSSITFTSSFVFSQEQLYAWGWN--NFGQLGIGNSISQYSPQLV--PIQ--NVL 63
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++C +A + +G+L+T+G FG+LG+G ++++IP VE LK L ACG +H
Sbjct: 64 FVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYH 123
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLV------------PTCV 293
AA+ G+L+TWG+ D G+LGH D AKL +
Sbjct: 124 MAAITR------------DGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKL 171
Query: 294 AALVEPNF--CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS 351
LV+ NF +V+ G T+ L+ G+VY++G G LG + + + + K+
Sbjct: 172 PELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSFKQISNLKN 231
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+ +I G+ L S ++ WG G+LG +P ++ L ++K +CG
Sbjct: 232 II-QIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGL--PKIKQFSCG 288
Query: 412 TNFTAAI----CLHKWVSGVD 428
F A+ L+ W G D
Sbjct: 289 EQFIGALSADGVLYTWGFGGD 309
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 161/358 (44%), Gaps = 50/358 (13%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D G ++ WG + G+LG G + ++P +E LD + +ACG H A
Sbjct: 76 DKSGKLYTWGR-SKFGLLGNGQVE---------NINIPTLVECLKHLDFKYVACGNYHMA 125
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHP--------------KLIDALS-NMNIELVA 134
+ + G++++WG + G+LGH D+ P KL + + N + V+
Sbjct: 126 AITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVS 185
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G+ T ++ G++Y+ G G+LG+ + + + + L+ I I G
Sbjct: 186 LGDQFTLILSDDGNVYSVGLNKK--GILGYETKNAEELSFKQISNLKNI--IQIDSGTDF 241
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + S G +F +G FG LG + P++++ L ++ + +CG E
Sbjct: 242 SVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKGLPKIK--QFSCG--------EQF 291
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+G S + G L+TWG G G+LG K+ +PT + N +V+CG + V +
Sbjct: 292 IGALS----ADGVLYTWGFGGDGQLGTPSKQD--IPTPHKISFDHNIDKVSCGQA-HVGI 344
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPN--RVEGKLSKSFVEEIACGSYH-VAVLTSK 369
++ +Y G GQLG ++ + PN R L V +IACG H A++ K
Sbjct: 345 ISNNKLYMHGRGKEGQLGRG-SETESPNSSRYSPLLVLENVLKIACGGSHSFAIVNQK 401
>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 170/374 (45%), Gaps = 57/374 (15%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA--------------------- 134
++ SWG S G+LG G++ L+P + LS NI +A
Sbjct: 60 QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHTLALAPGQLPSFSGDNQDSGDDGS 119
Query: 135 ------CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI 188
CG +H+ ++ ++G ++ WG G + G LG G+E +VP +N LE V I
Sbjct: 120 FELGISCGLFHS-SLLVNGKVWIWGKG--DGGRLGFGHENPVFVPT-LNSRLE--SVRCI 173
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+ G H+ + + GQ+FT+G G FG LGH +PR VE R A HTA
Sbjct: 174 ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTA 233
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPTCVAALVEPNF 301
A+ E SG+++TWG +GD + +P V AL P
Sbjct: 234 AITE------------SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAP-V 280
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
V+CG T+AL G ++ G+ +LG G + L + + +I CG Y
Sbjct: 281 AAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGY 340
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC-- 419
H LT +V +WG G +G+LGH + P +++AL DK+V IAC + +AA+
Sbjct: 341 HSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAE 400
Query: 420 --LHKWVSGVDQSM 431
L+ W + D +
Sbjct: 401 GKLYMWGNAKDSQL 414
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 157/338 (46%), Gaps = 38/338 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+IWG+G G + G N V +L LES V+ IA GG H+ +N
Sbjct: 137 GKVWIWGKGDGGRLGFGHENPV-------FVPTLNSRLES-----VRCIALGGLHSVALN 184
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VF+WG G LGH V L P+L++ I+ +A HT A+T SG++YTW
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTW 244
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNG-PLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDG G NE +P RV P V+++SCG + T + G+L+
Sbjct: 245 GRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAP---VAAVSCGGFFTMALGVDGKLWN 301
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G T LG G+ P+ V SL+ ++ CG +H+ A+ G
Sbjct: 302 WGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLALT------------GDG 349
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
K+ +WG G G+LGH + + VP + AL + +AC S + A+T G +Y G+
Sbjct: 350 KVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWGNA 409
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFV-EEIACGSYHV 363
QLG P LP + F+ E+ G YHV
Sbjct: 410 KDSQLGVP----GLPEVQTSPVEVIFLTEDDGLGPYHV 443
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 162/356 (45%), Gaps = 33/356 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+CG H++L+ G+V+ WG+ GGRLG G ++ V P L L + + +A G H+
Sbjct: 124 ISCGLFHSSLL-VNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLES--VRCIALGGLHS 180
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+ G ++TWG G FG LGH VP+ V G G + I+ HTA +T
Sbjct: 181 VALNALGQVFTWGYG--GFGALGHSVYHRELVPRLVEGSWRG-RIKHIATSGAHTAAITE 237
Query: 201 AGQLFTFG-------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+G+++T+G G G + +SIP V +L +CG + T A+
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPA-PVAAVSCGGFFTMAL--- 293
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
GKL+ WG LG G+ P V +L + ++ CG ++A
Sbjct: 294 ---------GVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLA 344
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
LT G V + G +GQLG+ + RV L+ V IAC A +T++ ++Y
Sbjct: 345 LTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLY 404
Query: 374 TWGKGANGRLG-HGDTDDRNSPSLV------EALKDKQVKSIACGTNFTAAICLHK 422
WG + +LG G + + SP V + L V S+A G + + L +
Sbjct: 405 MWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLRR 460
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 138/296 (46%), Gaps = 36/296 (12%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
+ALG VF WG G G G LG V +P+ +E + +++IA G H A
Sbjct: 184 NALGQVFTWGYG-GFGALG---------HSVYHRELVPRLVEGSWRGRIKHIATSGAHTA 233
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLH-------PKLIDALSNMNIELVACGEYHTCA 142
+ + GEV++WG + G + P + AL + V+CG + T A
Sbjct: 234 AITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALP-APVAAVSCGGFFTMA 292
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
+ + G L+ WG T NF LG GN + W PK V LE + I CG +H+ +T G
Sbjct: 293 LGVDGKLWNWGANT-NFE-LGRGNNIGGWEPKPVP-SLEDTPIIQIVCGGYHSLALTGDG 349
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++ ++G G G LGH ++ +PR +++L R AC G+SS++
Sbjct: 350 KVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIAC------------CGSSSAAV 397
Query: 263 CSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+ GKL+ WG+ +LG G E + P V L E + + H L+VA+ S
Sbjct: 398 TAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDD--GLGPYHVLSVAVGAS 451
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 175/372 (47%), Gaps = 50/372 (13%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACG 136
++ +ACGG H + + VF+ G G+LG V S + P + L + +I ++ G
Sbjct: 84 IRAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGL-DKDILHISAG 142
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWH 194
YH+ A+T+ G+LY WG + G LG G + + V P +V L GI + S++ G H
Sbjct: 143 YYHSAAITVDGELYMWGKNSS--GQLGLGKKAARVVRVPTKVE-ALHGITIQSVALGSEH 199
Query: 195 TAVVTSAGQLFTFG------------DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ VT G++ ++G FG+L S PR ++ L+G++ A
Sbjct: 200 SVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGIL---RSNSEFTPRLIKELEGIKVKNVAA 256
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G+ H+A E +G F +G+ ++G G P+ ++ + P
Sbjct: 257 GLLHSACTDE------------NGSAFMFGERSINKMGFGGVRNATTPSIISEV--PYAE 302
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSY 361
VACG T +T G +YT GS G LG P RVEG +S V +++CG
Sbjct: 303 GVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWK 362
Query: 362 HVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
H A + S +V+TWG G + G+LGHG D P++V+ K+ + I+
Sbjct: 363 HTAAI-SDNKVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHIS 421
Query: 410 CGTNFTAAICLH 421
CG N TAA+ H
Sbjct: 422 CGFNHTAAVLEH 433
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 149/347 (42%), Gaps = 31/347 (8%)
Query: 90 LVNKQGEVFS--WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
L N+ G+ F+ WG GRLG G P ALS+ +I VACG HT +T +
Sbjct: 42 LSNESGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRAVACGGAHTLFLTETR 101
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
++ G + G LG + SH + P V+G + I IS G +H+A +T G+L+
Sbjct: 102 RVFA--TGLNDCGQLGVSDVKSHAMDPLEVSGLDKDI--LHISAGYYHSAAITVDGELYM 157
Query: 207 FGDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+G + G LG G + + V +P +VE+L G+ A G H+ AV + G S
Sbjct: 158 WGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTD---GGEVLSWGG 214
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G G ++ P + L VA G + +G + G
Sbjct: 215 GGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFG 274
Query: 325 SPVYGQLG--------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
++G P ++P + E +ACG YH V+T E+YTWG
Sbjct: 275 ERSINKMGFGGVRNATTPSIISEVP----------YAEGVACGGYHTCVVTRGGELYTWG 324
Query: 377 KGANGRLGHGDTDDRNSPSLVEA-LKDKQVKSIACGTNFTAAICLHK 422
NG LG T +SP VE + V ++CG TAAI +K
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNK 371
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 135/320 (42%), Gaps = 74/320 (23%)
Query: 1 MKAMAMDAFRVS-LSSAVSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGL------- 51
+K+ AMD VS L + S G H + G++++WG+ + G LG G
Sbjct: 119 VKSHAMDPLEVSGLDKDILHISAGYYHSAAITVDGELYMWGKNS-SGQLGLGKKAARVVR 177
Query: 52 --NRVGSCFGVKMDSSLPKALESAVVLD-------------------------------- 77
+V + G+ + S + S V D
Sbjct: 178 VPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSE 237
Query: 78 -------------VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
V+N+A G H+A ++ G F +GE S ++G G + P +I
Sbjct: 238 FTPRLIKELEGIKVKNVAAGLLHSACTDENGSAFMFGERSINKMGFGGVRNATTPSIISE 297
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ E VACG YHTC VT G+LYTW G+ G LG + P RV GP
Sbjct: 298 VPYA--EGVACGGYHTCVVTRGGELYTW--GSNENGCLGTDSTYVSHSPVRVEGPFLEST 353
Query: 185 VSSISCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVSIPREVESL 232
VS +SCG HTA + S ++FT+G GTF G LGHG + P V+
Sbjct: 354 VSQVSCGWKHTAAI-SDNKVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLG 412
Query: 233 KGLRTVRAACGVWHTAAVVE 252
K +R V +CG HTAAV+E
Sbjct: 413 KNVRAVHISCGFNHTAAVLE 432
>gi|255575340|ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223532017|gb|EEF33828.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 497
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 155/315 (49%), Gaps = 22/315 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACG 136
V ++ HAA + + GEVF+ G+ S GH S + P+ ++AL + + VA G
Sbjct: 165 VVQVSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAG 224
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHT 195
T +T +G +Y+ G T+ G LGHG+ + PK + EGI V+ I+ GP +
Sbjct: 225 LNFTVFLTRTGHVYSCGTNTH--GQLGHGDTLDRPTPKIIE-SFEGIGSVAQIAAGPSYV 281
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEV 253
VT +G +++FG G+ LGHG++ + PR +++ K L VR + G H A+
Sbjct: 282 LAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALD-- 339
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
SSG ++TWG G G LGHGD+ K +P + +L +V T
Sbjct: 340 ----------SSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARKRKTFV 389
Query: 314 LTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
L G V+ G +G LG P +D + R+ L V +I+ G YH +TS+
Sbjct: 390 LVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAVTSQG 449
Query: 371 EVYTWGKGANGRLGH 385
+V+ +G +LGH
Sbjct: 450 QVFGFGDNERAQLGH 464
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAV-VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G +D PK +ES + V IA G + V G V+S+G S LGHG +
Sbjct: 251 GDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEF 310
Query: 118 HPKLIDAL--SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
HP+ I N+++ V+ G+ H A+ SG +YTWG G G LGHG+E+ +P+
Sbjct: 311 HPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFVYTWGKGYC--GALGHGDEIDKTLPEP 368
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
+N + V + T V+ G +F FG FG LG DR V PR ++SL
Sbjct: 369 LNSLKSHLAV-QVCARKRKTFVLVDGGCVFGFGWMGFGSLGFPDRGVSDKVMRPRILDSL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ R + + G++HT AV S G++F +GD ++ +LGH L PT
Sbjct: 428 RAHRVSQISTGLYHTVAVT------------SQGQVFGFGDNERAQLGHDTLRGCLEPT 474
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 24/280 (8%)
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHV 185
NM I G YHT ++ S + G+ G+LGHG E + V R+ P V
Sbjct: 113 NMQI---TTGRYHTLLISNSS---VYSCGSSLCGVLGHGPETTQCVSFSRITFP-SLARV 165
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGV 244
+S H A + +G++FT GD + GH D + + PR VE+LKG+ + A G+
Sbjct: 166 VQVSASHNHAAYILESGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVAAGL 225
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP-NFCR 303
T + +G +++ G G+LGHGD + P + + + +
Sbjct: 226 NFTVFLTR------------TGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQ 273
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSF-VEEIACGSY 361
+A G S +A+T SG VY+ GS LG+ + + P ++ K+ V ++ G
Sbjct: 274 IAAGPSYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDE 333
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
HV L S VYTWGKG G LGHGD D+ P + +LK
Sbjct: 334 HVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLK 373
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 133/277 (48%), Gaps = 15/277 (5%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ +E+ + + +A G + + G V+S G + G+LGHG D PK+I++
Sbjct: 207 PRFVEALKGVPCKQVAAGLNFTVFLTRTGHVYSCGTNTHGQLGHGDTLDRPTPKIIESFE 266
Query: 127 NM-NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ ++ +A G + AVT SG +Y++G G+ NF LGHG + + + P+ + + +H
Sbjct: 267 GIGSVAQIAAGPSYVLAVTDSGVVYSFGSGS-NF-CLGHGEQHNEFHPRAIQTFRRKNLH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +S G H + S+G ++T+G G G LGHGD ++P + SLK V+
Sbjct: 325 VVRVSAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTLPEPLNSLKSHLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTW-GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
T +V+ C G F W G G G G + + P + +L +
Sbjct: 385 RKTFVLVD--------GGCVFG--FGWMGFGSLGFPDRGVSDKVMRPRILDSLRAHRVSQ 434
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
++ G TVA+T+ G V+ G QLG+ G L
Sbjct: 435 ISTGLYHTVAVTSQGQVFGFGDNERAQLGHDTLRGCL 471
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 149/342 (43%), Gaps = 23/342 (6%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEYHTCAV 143
GR+ L+ V+S G G LGHG ++ + I S + V+ H +
Sbjct: 119 GRYHTLLISNSSVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNHAAYI 178
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG+++T GD + +F GH + R L+G+ ++ G T +T G
Sbjct: 179 LESGEVFTCGDNS-SF-CCGHQDTSRPIFRPRFVEALKGVPCKQVAAGLNFTVFLTRTGH 236
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSN 262
+++ G T G LGHGD P+ +ES +G+ +V + A G + AV +
Sbjct: 237 VYSCGTNTHGQLGHGDTLDRPTPKIIESFEGIGSVAQIAAGPSYVLAVTD---------- 286
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLTVALTTSGHV 320
SG ++++G G LGHG++ + P + N RV+ G VAL +SG V
Sbjct: 287 --SGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVVRVSAGDEHVVALDSSGFV 344
Query: 321 YTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
YT G G LG+ + D LP + L ++ VL V+ +G
Sbjct: 345 YTWGKGYCGALGHGDEIDKTLPEPLN-SLKSHLAVQVCARKRKTFVLVDGGCVFGFGWMG 403
Query: 380 NGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G LG D +D P ++++L+ +V I+ G T A+
Sbjct: 404 FGSLGFPDRGVSDKVMRPRILDSLRAHRVSQISTGLYHTVAV 445
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 111/228 (48%), Gaps = 24/228 (10%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWH 246
I+ G +HT +++++ +++ G GVLGHG + + + L R V+ + H
Sbjct: 116 ITTGRYHTLLISNS-SVYSCGSSLCGVLGHGPETTQCVSFSRITFPSLARVVQVSASHNH 174
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVA 305
A ++E SG++FT GD GH D + P V AL +VA
Sbjct: 175 AAYILE------------SGEVFTCGDNSSFCCGHQDTSRPIFRPRFVEALKGVPCKQVA 222
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-----VEEIACGS 360
G + TV LT +GHVY+ G+ +GQLG+ G +R K+ +SF V +IA G
Sbjct: 223 AGLNFTVFLTRTGHVYSCGTNTHGQLGH----GDTLDRPTPKIIESFEGIGSVAQIAAGP 278
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+V +T VY++G G+N LGHG+ + P ++ + K + +
Sbjct: 279 SYVLAVTDSGVVYSFGSGSNFCLGHGEQHNEFHPRAIQTFRRKNLHVV 326
>gi|302760239|ref|XP_002963542.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
gi|300168810|gb|EFJ35413.1| hypothetical protein SELMODRAFT_80654 [Selaginella moellendorffii]
Length = 360
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 191/399 (47%), Gaps = 56/399 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT G LG G +D+ LP+A++ L + ++ACGG HAA +
Sbjct: 3 VWSWGAGT-QGQLG---------LGTMIDALLPQAMDPP--LRILDMACGGAHAAAILDG 50
Query: 95 GEVFSWGEESGGRLGHGVDSD------VLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
G V +WG G +GH DS+ V P +++ + VA G HT VT SG+
Sbjct: 51 GRVATWGR---GLIGHEGDSEKDAAAVVAVPSVVEFFGGHRVCEVAAGWNHTAFVTESGE 107
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF-TF 207
L+T GDG FG LGHG+ VS P +V L + ++CG HT V++ G++ F
Sbjct: 108 LFTCGDGA--FGQLGHGDFVSRGTPCKV---LALSNAFKVACGMRHTLVLSGDGRVVKAF 162
Query: 208 G---DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
G G G L + V+ P+ + SL ++ ++V G+ S++
Sbjct: 163 GLAKRGQLGSLSSKELNKVASPQAIPSLDS-----------YSVSIVAAN-GDHSAALSG 210
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SG+L+ WG D+ VP A E F RV+ G + + LT G + G
Sbjct: 211 SGQLYLWGKAFD------DQSGAYVP--FLASEELKFHRVSLGWNHGLGLTEDGEAISWG 262
Query: 325 SPVYGQLGNPQADGKLPN----RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ +GQLG+ + + N RV+G L K V I+ GS H A + + ++YTWG G +
Sbjct: 263 TNRHGQLGSSRCISERSNIKFYRVQG-LEKHRVVSISAGSEHSAAVDAAGDLYTWGWGEH 321
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G+LG G +D P V + Q + CG+ FT A C
Sbjct: 322 GQLGLGHVNDERHPCRV-VVGQCQRSRVCCGSGFTFAFC 359
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 164/337 (48%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G SDV P + AL ++ ACG HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+T+ G++Y G N G LG G+ R++ ++ +S G +A ++
Sbjct: 100 LILTVVGNVYAAGGN--NEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSE 157
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D SV +P +V K + + +CG +H+A V
Sbjct: 158 DGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWI--SCGYYHSAFVT--------- 206
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKL---VPTCVAALVEPNFCRVACGHSLTVALTTS 317
G+L+T+G+ + G+LG KE + P VA + E +VACG TV LT
Sbjct: 207 ---MDGELYTFGEPESGKLGLP-KELLINHRTPQLVAGIPE-KVIQVACGGGHTVVLTEK 261
Query: 318 GHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G +GQLG L +V ++ + I+CG H A+++ +YT+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFG 320
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P L V+ +ACG
Sbjct: 321 DGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACG 357
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ P V L+ V +CG
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSKSDVKKPTCVKA-LKPEKVQFAACGR 96
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT ++T G ++ G G LG GD + + + ++ +T+A +
Sbjct: 97 NHTLILTVVGNVYAAGGNNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAAL- 155
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G+LF WGD +G++G D + VP V + ++CG+ +
Sbjct: 156 ----------SEDGRLFMWGDNSEGQIGLNDVISVCVPHQVN--IGKPISWISCGYYHSA 203
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+T G +YT G P G+LG P+ + + P V G K V ++ACG H VLT K
Sbjct: 204 FVTMDGELYTFGEPESGKLGLPKELLINHRTPQLVAGIPEK--VIQVACGGGHTVVLTEK 261
Query: 370 TEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
VYT+G G G+LG G + P ++E +K++++ I+CG N TA I
Sbjct: 262 A-VYTFGLGQFGQLGLGTFCFETLEPKVIEQIKNQKITYISCGENHTALI 310
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 135/278 (48%), Gaps = 21/278 (7%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSD 115
G K D P +++ VQ ACG H ++ G V++ G + G+LG G + +
Sbjct: 69 LGSKSDVKKPTCVKALKPEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQLGLGDTEERN 128
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
H ++ S NI+ ++ G + A++ G L+ WGD + G +G + +S VP +
Sbjct: 129 TFH-RISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGDNSE--GQIGLNDVISVCVPHQ 185
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
VN G +S ISCG +H+A VT G+L+TFG+ G LG +P+E+ L
Sbjct: 186 VNI---GKPISWISCGYYHSAFVTMDGELYTFGEPESGKLG--------LPKEL--LINH 232
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVA 294
RT + G+ V++V G + + ++T+G G G+LG G L P +
Sbjct: 233 RTPQLVAGI--PEKVIQVACGGGHTVVLTEKAVYTFGLGQFGQLGLGTFCFETLEPKVIE 290
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+ ++CG + T ++ G +YT G +G+LG
Sbjct: 291 QIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLG 328
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDA 124
PK +E + I+CG H AL++ G ++++G+ G+LG G++ S+ P L
Sbjct: 286 PKVIEQIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPILCSE 345
Query: 125 LSNMNIELVACG 136
++LVACG
Sbjct: 346 FLRFTVQLVACG 357
>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Metaseiulus occidentalis]
Length = 523
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 166/339 (48%), Gaps = 22/339 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++ACG +H+ + G FS+G G+LGHG +++P+ + AL + LVACG
Sbjct: 44 VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGR 103
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT T +Y +G + + LG + ++ ++ L G+ V +++ G H+
Sbjct: 104 SHTLVATDDKKVYAFGINSEH--QLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLA 161
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+++ G ++ +G G LG G +K +P ++++ +G + + + G +H+A V
Sbjct: 162 LSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKT-EG-KAIAISAGAYHSAYV------- 212
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+ G L+T+G+ + G+LG K ++ VACG S TVALT
Sbjct: 213 -----NTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCD 267
Query: 318 GHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G Y+ G GQLG Q P+ ++ ++ G H A L+ ++YT
Sbjct: 268 GRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMA-RVSAGQSHTAFLSEGRQMYTC 326
Query: 376 GKGANGRLGHGDTD---DRNSPSLVEALKDKQVKSIACG 411
G+G +G+L D + ++ SP LV+ L QV+ ++CG
Sbjct: 327 GEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCG 365
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 131/277 (47%), Gaps = 36/277 (12%)
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G ++T+G ++ L G + WV V S++CG H+ +T++G+ F+
Sbjct: 19 GAVFTFGKSKFSDNLPG-----TFWVKNDA--------VISVACGDQHSVFITASGRTFS 65
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FG +G LGHG K++ PR V++LK R + ACG HT +
Sbjct: 66 FGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATD------------DK 113
Query: 267 KLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
K++ +G + +LG A P VA L + G ++AL+ G VY GS
Sbjct: 114 KVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGS 173
Query: 326 PVYGQLG-NPQADGKLPNRV--EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+GQLG + KLP ++ EGK I+ G+YH A + + +YT+G+ +G+
Sbjct: 174 SEHGQLGLGRKKQRKLPVQLKTEGK-----AIAISAGAYHSAYVNTDGVLYTFGETEHGK 228
Query: 383 LGHGDTDDR-NSPSLVEALKDKQVKSIACGTNFTAAI 418
LG + PS V ++ V S+ACG + T A+
Sbjct: 229 LGTNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVAL 264
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 31/261 (11%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + + V+ + G H+ ++ +G V+ WG G+LG G P + +
Sbjct: 138 PQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLP--VQLKT 195
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP-----LE 181
++ G YH+ V G LYT+G+ HG ++ PK+ P ++
Sbjct: 196 EGKAIAISAGAYHSAYVNTDGVLYTFGETE-------HGKLGTNLAPKKCRKPSKVPDIQ 248
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS-VSIPREVESLKGLRTVRA 240
G+ V+S++CG HT +T G+ ++FGDG+ G LG G R + P ++ G++ R
Sbjct: 249 GL-VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVKMARV 307
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA---KLVPTCVAALV 297
+ G HTA + E +++T G+G G+L D E K P V L
Sbjct: 308 SAGQSHTAFLSE------------GRQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILS 355
Query: 298 EPNFCRVACGHSLTVALTTSG 318
+V+CG T+ L G
Sbjct: 356 LFQVQQVSCGGCHTLVLVVPG 376
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 141/280 (50%), Gaps = 27/280 (9%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+T G G N G LG G H V P+ + LEGI V I+ G HT V+TS G++ +
Sbjct: 17 WTLGFGNTNSGELGLGGIEDHIVRVPRSI-PQLEGIRVRQIATGAHHTLVLTSHGRVLSC 75
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G LG S + P V +L+ LR V+ CG H+ A+ E +G+
Sbjct: 76 GSNDHDQLGQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTE------------AGQ 121
Query: 268 LFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
++ WG KG+LG+G+ +E++L P V L ++ACG + +AL +G +Y G
Sbjct: 122 VYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDN 181
Query: 327 VYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
GQLG PQ ++P V L + +IACG+ H VL+ ++ WG G
Sbjct: 182 GNGQLGIGTVGEPQ---RVPVEVTNLLGLP-LSQIACGANHSMVLSKSGVIFVWGSNRFG 237
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
+LG D DR P+L++ L+ + VK IA G +AA+ H
Sbjct: 238 QLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAH 277
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 53 RVGSC-------FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG 105
RV SC G ++ ++ P+ + + L + + CG +H+ + + G+V+ WG S
Sbjct: 71 RVLSCGSNDHDQLGQEVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSK 130
Query: 106 GRLGHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD---GTYNFGL 161
G+LG+G + L P+ + L+ + +ACG H A+ +G LY WGD G G
Sbjct: 131 GQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLGIGT 190
Query: 162 LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
+G VP V L G+ +S I+CG H+ V++ +G +F +G FG LG D K
Sbjct: 191 VGEPQR----VPVEVTNLL-GLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNK 245
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVV----------------EVMVG----NSSSS 261
+ P +++L+ A G H+AA+ EV + S+
Sbjct: 246 DRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQ 305
Query: 262 NCSSGKLFTWGD--------GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+ + KLF+ + G G+LGHG K +L P + L+ ++A G TV
Sbjct: 306 SALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVC 365
Query: 314 LT-TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
T G V+T G GQLG+ + P + G KS
Sbjct: 366 YAPTVGKVFTFGLGGNGQLGSSVSMVSTPTPLAGNWGKSL 405
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 152/357 (42%), Gaps = 49/357 (13%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+P+++ + V+ IA G H ++ G V S G +LG V + P+ + AL
Sbjct: 41 VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTT--KPEPVTAL 98
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+ I V CG+ H+ A+T +G +Y WG + G LG+G + R L V
Sbjct: 99 QCLRIVQVCCGQQHSMALTEAGQVYMWGSNSK--GQLGNGEGQESRLSPRFVKTLAPFTV 156
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGV 244
I+CG H + + G L+ +GD G LG G + +P EV +L GL + ACG
Sbjct: 157 VQIACGSNHCLALLNNGALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGA 216
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+ + SG +F WG G+LG D + + PT + L + + +
Sbjct: 217 NHSMVL------------SKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFI 264
Query: 305 ACGHSLTVALTTSGHVYTMGSPVY----------GQLGNPQADGKLPNRVEGKLSKSFVE 354
A G + + ALT G V+T G Y G NPQ+ + KL
Sbjct: 265 AAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQS------ALARKLFSLIER 318
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
E SY G+ G+LGHG +D+ +P ++ L + IA G
Sbjct: 319 EFCRHSY----------------GSYGQLGHGSKNDQLTPMKIQELMGTTITQIALG 359
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 96/223 (43%), Gaps = 49/223 (21%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ WG+ G+G LG G V +P + + + L + IACG H+ +++
Sbjct: 173 GALYAWGDN-GNGQLGIG--------TVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G +F WG G+LG + D P L+ L +++ +A G H+ A+T G ++T+
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTF 283
Query: 153 GDGTY--------------------------------------NFGLLGHGNEVSHWVPK 174
G Y ++G LGHG++ P
Sbjct: 284 GWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPM 343
Query: 175 RVNGPLEGIHVSSISCGPWHTA-VVTSAGQLFTFGDGTFGVLG 216
++ L G ++ I+ G HT + G++FTFG G G LG
Sbjct: 344 KIQ-ELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 131/261 (50%), Gaps = 17/261 (6%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDG 155
V SWG G+LGHG D L P + A +I V CG +T A + SG D+Y+WG G
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 184
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+FG LGHG+ ++P + L+G+ + ISCG H VT ++ ++G G L
Sbjct: 185 --DFGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G G K +P+++ + +G+R A G H+ A+ E G L+ WG G
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE------------DGDLYGWGWGR 289
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G LG GD +L+P V + V+CG T+++++SG +YT G YGQLG+
Sbjct: 290 YGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGD 348
Query: 336 ADGKLPNRVEGKLSKSFVEEI 356
+ L R LS + ++
Sbjct: 349 FEDCLVPRKVQALSDKLISQV 369
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 131/268 (48%), Gaps = 27/268 (10%)
Query: 38 WGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQG-E 96
WG G DG LG G D LP L + D+ ++ CG + +K G +
Sbjct: 128 WGRGE-DGQLGHGDTD---------DRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKD 177
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V+SWG GRLGHG SD+ P I AL + I+ ++CG+ H AVT+ + +WG
Sbjct: 178 VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LG G VP+++ EGI + ++ G H+ +T G L+ +G G +G LG
Sbjct: 238 N--GELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLG 294
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
GD IP +V ++ G + V +CG HT ++ SSG L+T G
Sbjct: 295 LGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISI------------SSSGGLYTHGWSKY 341
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRV 304
G+LGHGD E LVP V AL + +V
Sbjct: 342 GQLGHGDFEDCLVPRKVQALSDKLISQV 369
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 19/260 (7%)
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ-LFTFGD 209
+WG G G LGHG+ +P +++ +G + S++CG +T + +G+ ++++G
Sbjct: 127 SWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVARSKSGKDVYSWGW 183
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G FG LGHGD + IP + +L+GLR + +CG H AV K+
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT------------MENKVL 231
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
+WG G LG G + VP + A VA G +VA+T G +Y G YG
Sbjct: 232 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYG 291
Query: 330 QLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
LG + +L P +V + + ++CG H ++S +YT G G+LGHGD
Sbjct: 292 NLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDF 349
Query: 389 DDRNSPSLVEALKDKQVKSI 408
+D P V+AL DK + +
Sbjct: 350 EDCLVPRKVQALSDKLISQV 369
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
DV+ WG G R+G G D +P + + L ++ I+CG H V
Sbjct: 177 DVYSWGWGD--------FGRLGH--GDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 226
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+ +V SWG G LG G D P+ I A + I++VA G H+ A+T GDLY WG
Sbjct: 227 ENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWG 286
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G Y G LG G+ +P++VN ++G + +SCG HT ++S+G L+T G +G
Sbjct: 287 WGRY--GNLGLGDTNDRLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYG 342
Query: 214 VLGHGDRKSVSIPREVESL 232
LGHGD + +PR+V++L
Sbjct: 343 QLGHGDFEDCLVPRKVQAL 361
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
++G G G LGHGD +P ++ + G V CG +T A S
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVA------------RSKS 174
Query: 266 GK-LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
GK +++WG GD GRLGHGD +P + AL +++CG +A+T V + G
Sbjct: 175 GKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWG 234
Query: 325 SPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG D +P ++ ++ +A G+ H +T ++Y WG G G L
Sbjct: 235 RNQNGELGLGTTKDSHVPQKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNL 293
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G GDT+DR P V DK V ++CG T +I
Sbjct: 294 GLGDTNDRLIPEKVNIDGDKIVM-VSCGWRHTISI 327
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
NS + S + +WG G+ G+LGHGD + +L+PT ++A + V CG TVA +
Sbjct: 114 NSIQNQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSK 173
Query: 317 SGH-VYTMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
SG VY+ G +G+LG+ +D +P+ + L +++I+CG H +T + +V +
Sbjct: 174 SGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLS 232
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG+ NG LG G T D + P + A + ++K +A G + AI
Sbjct: 233 WGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 329 GQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS-YHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG+ D +L P ++ + V + CG+ Y VA S +VY+WG G GRLGHG
Sbjct: 134 GQLGHGDTDDRLLPTKLSAFDGQDIVS-VTCGADYTVARSKSGKDVYSWGWGDFGRLGHG 192
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
D D P + AL+ ++K I+CG A+ +
Sbjct: 193 DPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTME 227
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 2 KAMAMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSC-FGV 60
K +A + R+ + +A + S D GD++ WG G R G+ G
Sbjct: 254 KILAFEGIRIKMVAAGAEHSVAITED-----GDLYGWGWG-----------RYGNLGLGD 297
Query: 61 KMDSSLPKALE---SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
D +P+ + +V+ ++CG RH ++ G +++ G G+LGHG D L
Sbjct: 298 TNDRLIPEKVNIDGDKIVM----VSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCL 353
Query: 118 HPKLIDALSNMNIELV 133
P+ + ALS+ I V
Sbjct: 354 VPRKVQALSDKLISQV 369
>gi|302799553|ref|XP_002981535.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
gi|300150701|gb|EFJ17350.1| hypothetical protein SELMODRAFT_114846 [Selaginella moellendorffii]
Length = 360
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 130/401 (32%), Positives = 190/401 (47%), Gaps = 60/401 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG GT G LG G +D+ LP+A++ L + ++ACGG HAA +
Sbjct: 3 VWSWGAGT-QGQLG---------LGTMIDALLPQAMDPP--LRILDMACGGAHAAAILDG 50
Query: 95 GEVFSWGEESGGRLGHGVDSD------VLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
G V +WG G +GH DS+ V P +++ + VA G HT VT SG+
Sbjct: 51 GRVATWGR---GLIGHEGDSEKDAAAVVAVPSVVEFFGGHRVCEVAAGWNHTAFVTESGE 107
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF-TF 207
L+T GDG FG LGHG+ VS P +V L + ++CG HT V++ G++ F
Sbjct: 108 LFTCGDGA--FGQLGHGDFVSRGTPCKV---LALSNAFKVACGMRHTLVLSGDGRVVKAF 162
Query: 208 G---DGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
G G G L + V+ P+ + SL G+ V A G+ S++
Sbjct: 163 GLAKRGQLGSLSSKELNKVASPQAIPSLDSYGVSIVAAN--------------GDHSAAL 208
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
SG+L+ WG D+ VP A E F RV+ G + + LT G +
Sbjct: 209 SGSGQLYLWGKAFD------DQSGAYVP--FLASEELKFHRVSLGWNHGLGLTEDGEAIS 260
Query: 323 MGSPVYGQLGNPQADGKLPN----RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
G+ +GQLG+ + + N RV+G L K V I+ GS H A + + ++YTWG G
Sbjct: 261 WGTNRHGQLGSSRCISERSNIKFYRVQG-LEKHRVVSISAGSEHSAAVDAAGDLYTWGWG 319
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+G+LG G +D P V + Q + CG+ FT A C
Sbjct: 320 EHGQLGLGHVNDERHPCRV-VVGQCQRSRVCCGSGFTFAFC 359
>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
carolinensis]
Length = 526
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 149/299 (49%), Gaps = 21/299 (7%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCA 142
G V + EVF+ G G LG G + + P+ +D L I ++ G H
Sbjct: 30 AGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVV 89
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G++YTWG Y+ LG+G + +P +++ L V+ ++CG H+ ++TS G
Sbjct: 90 ATAEGEVYTWGHNAYS--QLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDG 147
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
+++T+G G +G G + +IPR V S L+ V ACG + AVVE
Sbjct: 148 EVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVE--------- 198
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G+++ WG G+LG G+ + P +AAL RVACG++ T+ LT G +Y
Sbjct: 199 ---NGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMY 255
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTWGK 377
G+ YGQLG +++ P V + K V EI AC S H A T ++VY WG+
Sbjct: 256 AWGANSYGQLGTGNRSNQSYP--VPITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ 312
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 131/274 (47%), Gaps = 19/274 (6%)
Query: 57 CFGV--KMDSSLPKALESAVVLDVQNIACG-GRHAALVNKQGEVFSWGEESGGRLGHGVD 113
C GV +S P+ L++ + ++ G G H + +GEV++WG + +LG+G
Sbjct: 53 CLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTT 112
Query: 114 SDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
++ L P I L N + VACG +H+ +T G++YTWG N G +G G+ + +
Sbjct: 113 NNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYN--NSGQVGSGSTANQAI 170
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+RV L+ +I+CG + V G+++ +G G LG G+ + P + +L
Sbjct: 171 PRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAAL 230
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+G+R R ACG HT + + G+++ WG G+LG G++ + P
Sbjct: 231 QGIRVQRVACGYAHTLVLTD------------EGQMYAWGANSYGQLGTGNRSNQSYPVP 278
Query: 293 VAALVEPNFCRVACGHSLTVALTTSG-HVYTMGS 325
+ + AC + T A T G VY G
Sbjct: 279 ITVDKDRVIEIAACHSAHTSAAKTQGSQVYMWGQ 312
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ + P+R++ L G ++ +S G H V T+ G+++T+G +
Sbjct: 47 GTNCSGCLGVGDTQNSVEPRRLD-TLCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G + +P ++ + L + ACG H+ + S G+++TWG
Sbjct: 106 QLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILT------------SDGEVYTWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V + ++ +ACG ++A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + ++Y WG + G+LG G+ +
Sbjct: 214 GLGNSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P + KD+ ++ AC + T+A
Sbjct: 273 QSYPVPITVDKDRVIEIAACHSAHTSA 299
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
VT ++F G G LG GD ++ PR +++L G + C + + V V
Sbjct: 37 VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKI---TCLSYGSGPHVVVAT-- 91
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTT 316
+ G+++TWG +LG+G L+P ++ LV VACG ++ LT+
Sbjct: 92 ------AEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTS 145
Query: 317 SGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G GQ+G+ A+ +P RV L IACG + EVY W
Sbjct: 146 DGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEVYVW 205
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G NG+LG G++ ++ +P + AL+ +V+ +ACG T +
Sbjct: 206 GYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 15/179 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ-NIACGGRHAALV 91
G+V+ WG +VGS G + ++P+ + S + + NIACG + V
Sbjct: 147 GEVYTWGYNNS--------GQVGS--GSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAV 196
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ GEV+ WG G+LG G + P I AL + ++ VACG HT +T G +Y
Sbjct: 197 VENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYA 256
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG-QLFTFGD 209
WG +Y G LG GN + P + + + + +C HT+ + G Q++ +G
Sbjct: 257 WGANSY--GQLGTGNRSNQSYPVPITVDKDRV-IEIAACHSAHTSAAKTQGSQVYMWGQ 312
>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
Length = 627
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 143/282 (50%), Gaps = 29/282 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V++WG S +L G +L PKL+ ++ + G+Y T + G + G G+
Sbjct: 360 VYAWGSNSSHQLAEGTSEKILQPKLVTNFPK--VQQLEAGQYCTFVIDNDGAVSACGKGS 417
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIH----VSSISCGPWHTAVVTSAGQLFTFGDGTF 212
Y G LG G+ + PK+++ + H +SS HT +T G LF++GDG +
Sbjct: 418 Y--GRLGLGDSSNQTAPKKLS--FDATHLVKKISSSKGSDGHTLALTVEGALFSWGDGDY 473
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAAC-GVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGHG+ + P+ ++ + V+ C G H+AAV E G+L+TW
Sbjct: 474 GKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTE------------DGQLYTW 521
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH-VYTMGSPVYGQ 330
G+GD GRLGHGD + VPT V + N +VACG S T+A++ G V+T G G+
Sbjct: 522 GEGDFGRLGHGDNSGRNVPTLVKDI--SNVGQVACGSSHTIAVSQDGRTVWTFGG---GK 576
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
LG A+ +V + ++ ++ACGS+ LTS +V
Sbjct: 577 LGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLALTSSGQV 618
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 140/289 (48%), Gaps = 33/289 (11%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG + + G ++ K+ ++ PK VQ + G +++
Sbjct: 360 VYAWGSNSSHQLAEGTSEKI---LQPKLVTNFPK---------VQQLEAGQYCTFVIDND 407
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLYT 151
G V + G+ S GRLG G S+ PK + + ++ ++ + HT A+T+ G L++
Sbjct: 408 GAVSACGKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDGHTLALTVEGALFS 467
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WGDG Y G LGHGN + PK + GPL G V I G H+A VT GQL+T+G+G
Sbjct: 468 WGDGDY--GKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLYTWGEGD 525
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
FG LGHGD ++P V+ + + V ACG HT AV + ++T+
Sbjct: 526 FGRLGHGDNSGRNVPTLVKDISNVGQV--ACGSSHTIAVSQ-----------DGRTVWTF 572
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
G G+LG D P V A +VACG ++ALT+SG V
Sbjct: 573 GG---GKLGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLALTSSGQV 618
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 35/279 (12%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRV-NGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
+Y WG + + L G PK V N P V + G + T V+ + G +
Sbjct: 360 VYAWGSNSSH--QLAEGTSEKILQPKLVTNFP----KVQQLEAGQYCTFVIDNDGAVSAC 413
Query: 208 GDGTFGVLGHGDRKSVSIPREV-----ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
G G++G LG GD + + P+++ +K + + + + G HT A+
Sbjct: 414 GKGSYGRLGLGDSSNQTAPKKLSFDATHLVKKISSSKGSDG--HTLALT----------- 460
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC-GHSLTVALTTSGHVY 321
G LF+WGDGD G+LGHG+ + P + + + C G+ + A+T G +Y
Sbjct: 461 -VEGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCICAGYRHSAAVTEDGQLY 519
Query: 322 TMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGA 379
T G +G+LG+ G+ +P V+ S V ++ACGS H +AV V+T+G
Sbjct: 520 TWGEGDFGRLGHGDNSGRNVPTLVK---DISNVGQVACGSSHTIAVSQDGRTVWTFG--- 573
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG D + P +V+A ++ +ACG++ + A+
Sbjct: 574 GGKLGFEDANRVYRPKVVDAFAGLYIRKVACGSHSSLAL 612
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 165/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL +N++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P + AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
L G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG + D++ P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVISFGHGPS-DKSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGT 355
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 31/335 (9%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLID 123
LP+ +++ L+V ++CG H+ V +G VF+WG S G+LG G ++ PK I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT 123
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEG 182
L+ + I V+CG YH+ A++ +++WG ++ G LG G EV S P+RV LEG
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEG 180
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLKGLRTVR 239
I ++ ++ G H+ ++ G F +G + G L R + P + +LK L +
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY 240
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HTA +++ GK+FT+GD G+LG+ K P V ++
Sbjct: 241 ISCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDG 287
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
++ CG T+A +V+T G + G+ +D P E L+ +F +I C
Sbjct: 288 LVSQIDCGSYHTLA-----YVHTTGQVI--SFGHGPSDKSKPTHPEA-LTGNF--DIRCL 337
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
++ + + G AN H DT ++P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAP 372
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + + A GE H+ + + + + GD + G LG
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRRAPRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE ++V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLAL------------SKDSQVFSWGKNSHGQLGLGKEVPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P +
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVL +V+T+G ++G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 31/283 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLNVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P + G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+ G++FTFGD + G LG+ P+ VE + GL + + C
Sbjct: 236 LGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGD 283
G +HT A V ++G++ ++G G DK + H +
Sbjct: 295 GSYHTLAYVH-----------TTGQVISFGHGPSDKSKPTHPE 326
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG ++P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEVPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P + ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 165/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL +N++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P + AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
L G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG + D++ P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVISFGHGPS-DKSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGT 355
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 31/335 (9%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLID 123
LP+ +++ L+V ++CG H+ V +G VF+WG S G+LG G ++ PK I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT 123
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEG 182
L+ + I V+CG YH+ A++ +++WG ++ G LG G EV S P+RV LEG
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEG 180
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLKGLRTVR 239
I ++ ++ G H+ ++ G F +G + G L R + P + +LK L +
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY 240
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HTA +++ GK+FT+GD G+LG+ K P V ++
Sbjct: 241 ISCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDG 287
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
++ CG T+A +V+T G + G+ +D P E L+ +F +I C
Sbjct: 288 LVSQIDCGSYHTLA-----YVHTTGQVI--SFGHGPSDKSKPTHPEA-LTGNF--DIRCL 337
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
++ + + G AN H DT ++P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAP 372
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + + A GE H+ + + + + GD + G LG
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRRAPRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE ++V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLAL------------SKDSQVFSWGKNSHGQLGLGKEVPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P +
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVL +V+T+G ++G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 134/283 (47%), Gaps = 31/283 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLNVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P + G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+ G++FTFGD + G LG+ P+ VE + GL + + C
Sbjct: 236 LGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGD 283
G +HT A V ++G++ ++G G DK + H +
Sbjct: 295 GSYHTLAYVH-----------TTGQVISFGHGPSDKSKPTHPE 326
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG ++P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEVPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P + ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
>gi|18400769|ref|NP_566512.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|42572455|ref|NP_974323.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|7021728|gb|AAF35409.1| unknown protein [Arabidopsis thaliana]
gi|15795108|dbj|BAB02372.1| unnamed protein product [Arabidopsis thaliana]
gi|23297250|gb|AAN12924.1| unknown protein [Arabidopsis thaliana]
gi|332642152|gb|AEE75673.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332642153|gb|AEE75674.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 488
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 153/321 (47%), Gaps = 32/321 (9%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVA 134
V ++ H+A V + G+V + G+ S GH +D+ + PKL++AL + VA
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVA 222
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-----GPLEGIHVSSIS 189
G + T ++ G YT G T+ G LGHG+ + VPK V GP V I+
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGP-----VVQIA 275
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHT 247
GP + VT G +++FG G+ LGHG+++ PR +++ K G+ +R + G H
Sbjct: 276 AGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A+ S+G+++TWG G G LGHGD+ K+ P + L +V
Sbjct: 336 VALD------------SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCAR 383
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
T L G +Y G +G LG P +D L RV L V +++ G YH
Sbjct: 384 KRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTI 443
Query: 365 VLTSKTEVYTWGKGANGRLGH 385
V+T + ++ +G +LGH
Sbjct: 444 VVTQRGRIFGFGDNERAQLGH 464
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV---PKRVNGPLEGIHVSSIS 189
+A G+YHT + S + G G+L HG+E + V P P + V+ +S
Sbjct: 116 IATGKYHTLLINNSK---VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQ---VAQVS 169
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTA 248
H+A V +GQ+ T GD + GH D + + P+ VE+LKG + A G+ T
Sbjct: 170 ATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTV 229
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVAC 306
+ G +T G G+LGHGD + VP V L + P ++A
Sbjct: 230 FLSR------------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP-VVQIAA 276
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS--FVEEIACGSYHVA 364
G S +A+T G VY+ GS LG+ + +L RV + + ++ G H
Sbjct: 277 GPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV 336
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
L S VYTWGKG G LGHGD +D+ +P ++ L +
Sbjct: 337 ALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAVVL-DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G +D +PK +E + V IA G + V + G V+S+G S LGHG D L
Sbjct: 251 GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL 310
Query: 118 HPKLIDALSNMNIEL--VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P++I A I + V+ G+ H A+ +G +YTWG G G LGHG+E P+
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC--GALGHGDENDKITPQ- 367
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
V L + T V+ G L+ FG FG LG DR V PR +E L
Sbjct: 368 VLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
K R + + G++HT V + G++F +GD ++ +LGH L PT
Sbjct: 428 KPHRVSQVSTGLYHTIVVTQ------------RGRIFGFGDNERAQLGHDSLRGCLEPT 474
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEY 138
IA G H L+N +V+S G G L HG ++ + I+ + V+ +
Sbjct: 115 QIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H+ V SG + T GD + + GH + ++ L+G ++ G T +
Sbjct: 174 HSAFVLQSGQVLTCGDNSSH--CCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFL 231
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAVVEVMVGN 257
+ G +T G T G LGHGD +P+ VE LK + V+ A G + AV +
Sbjct: 232 SREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQ----- 286
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGHSLTVALT 315
G ++++G G LGHG+++ +L P + A + RV+ G VAL
Sbjct: 287 -------DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD 339
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
++G VYT G G LG+ + K+ +V L+ ++ VL +Y +
Sbjct: 340 SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGF 399
Query: 376 GKGANGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G LG D +D P ++E LK +V ++ G T +
Sbjct: 400 GWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 127/279 (45%), Gaps = 19/279 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK +E+ + +A G ++++G ++ G + G+LGHG D PK+++ L
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ + +A G + AVT G +Y++G G+ NF LGHG + P+ + +GIH
Sbjct: 267 TIGPVVQIAAGPSYVLAVTQDGSVYSFGSGS-NF-CLGHGEQQDELQPRVIQAFKRKGIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ +S G H + S G+++T+G G G LGHGD P+ + +L V+
Sbjct: 325 ILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 301
T +VE G L+ +G G LG D+ + L P + L
Sbjct: 385 RKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
+V+ G T+ +T G ++ G QLG+ G L
Sbjct: 433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCL 471
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+ +++ + + ++ G HA ++ G V++WG+ G LGHG ++D
Sbjct: 304 GEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDK 363
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 174
+ P+++ L+N + + C V + G L +G G FG LG + VS V +
Sbjct: 364 ITPQVLVNLNNC-LAVQVCARKRKTFVLVEGGLL-YGFGWMGFGSLGFPDRGVSDKVLRP 421
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
RV L+ VS +S G +HT VVT G++F FGD LGH + P E+
Sbjct: 422 RVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 122/214 (57%), Gaps = 15/214 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G + + + P+L++ LS + + ++ G
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAG 438
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ A+++SG++Y+WG + G LG G+ P + L+ V ++CG HTA
Sbjct: 439 KAHSMALSMSGNIYSWGRN--DLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTA 495
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T G +FTFG G +G LGH ++ PR V L G R + ACG WHT A V +
Sbjct: 496 LLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDL-- 553
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
GK+F++G G +G+LG+G +L+P
Sbjct: 554 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 578
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 21/275 (7%)
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLK 233
R L+ + I+CG +H+ ++ G+LF +G G LG G S+ P+ VE L
Sbjct: 369 RFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLS 428
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
G+ V+ + G H+ A+ SG +++WG D G+LG G + P+ +
Sbjct: 429 GVPLVQISAGKAHSMAL------------SMSGNIYSWGRNDLGQLGLGHTNGEDFPSLI 476
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
AL +ACG S T LT G V+T G+ YGQLG+ +L R+ +L+ + V
Sbjct: 477 EALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRV 536
Query: 354 EEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
++ACG +H +A ++ +V+++G G G+LG+G T ++ P ++ ++++K T
Sbjct: 537 TQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK-FESRT 595
Query: 413 NFTAAICLHKWVSGVDQSMC--SGCRLPFNNFKRK 445
+ I ++G +QS+ G + P+ N +R+
Sbjct: 596 SEKELIM----IAGGNQSILLWMGKKNPYVNLRRR 626
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG VG F P+ +E + + I+ G H+ ++
Sbjct: 396 GELFAWGQNL-HGQLG-----VGRLF---TSIPTPQLVEHLSGVPLVQISAGKAHSMALS 446
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG G+LG G + P LI+AL N +E +ACG HT +T G ++T+
Sbjct: 447 MSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 506
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G Y G LGH + + P+ V L G V+ ++CG WHT A V+ G++F+FG G
Sbjct: 507 GAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGK 563
Query: 212 FGVLGHGDRKSVSIP 226
G LG+G + IP
Sbjct: 564 EGQLGNGGTHNQLIP 578
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 27/259 (10%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ + ++ G H +++ G+ F + + + H + L +I + C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKSIIQITC 384
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+YH+ A++ G+L+ WG + G LG G + ++ L G+ + IS G H+
Sbjct: 385 GDYHSLALSKGGELFAWGQNLH--GQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAHS 442
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ +G ++++G G LG G P +E+L + ACG HTA + +
Sbjct: 443 MALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK--- 499
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G +FT+G G G+LGH + +L P V L +VACG T+A
Sbjct: 500 ---------DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYV 550
Query: 316 TS-GHVYTMGSPVYGQLGN 333
+ G V++ GS GQLGN
Sbjct: 551 SDLGKVFSFGSGKEGQLGN 569
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 108/237 (45%), Gaps = 27/237 (11%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ + S+ G H +++S G+ F + S+ R L+ ++ C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 384
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G +H+ A+ G+LF WG G+LG G + P V L
Sbjct: 385 GDYHSLAL------------SKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPL 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS 360
+++ G + ++AL+ SG++Y+ G GQLG +G+ P+ +E L VE +ACG
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGG 491
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H A+LT V+T+G G G+LGH T + P LV L +V +ACG T A
Sbjct: 492 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLA 548
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/355 (30%), Positives = 168/355 (47%), Gaps = 27/355 (7%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC 135
D++ + G A++ +G V + G G+ G G D V+ + + AL + ++ +A
Sbjct: 362 DIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 421
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCG 191
G H A+T +G Y+WG YN G LGH N + VPK + L+ + S
Sbjct: 422 SNGCEHMIALTDTGLAYSWG---YNDRGQLGHENLATKIHVPKLIES-LKDKKLGFASVS 477
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
H+AV+T AG+L+TFG G LG + S P+ V+SL+ ACG++HT
Sbjct: 478 YHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICT 537
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
++G+LFT G D G+LG +PT VA L VACG+ +
Sbjct: 538 ------------AAGELFTCGKNDYGQLGLAHNRQIKLPTLVA-LPNEMVSFVACGYYHS 584
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
V ++T G ++ G YGQLG + +PN V + V CG YH +L+ +
Sbjct: 585 VVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRA-TCGCYHTVLLSEQG 643
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK---SIACGTNFTAAICLHK 422
+VY +G+ G+LG+ + D P ++ +K + +A G T+ I K
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERK 698
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 157/332 (47%), Gaps = 24/332 (7%)
Query: 46 VLGGGLNRVGSCFGVKMDSS--LPKALESAVVLDVQNIAC--GGRHAALVNKQGEVFSWG 101
VL GLN+ G C D + + +++ V+ IA G H + G +SWG
Sbjct: 382 VLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWG 441
Query: 102 EESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFG 160
G+LGH + +H PKLI++L + + + +H+ +T +G+LYT+G + G
Sbjct: 442 YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFG--MNDCG 499
Query: 161 LLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR 220
LG + P+ V LE VS ++CG +HT + T+AG+LFT G +G LG
Sbjct: 500 QLGLDHTQHQSTPQLVKS-LEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN 558
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ + +P V +L ACG +H+ V + G+ F++G D G+LG
Sbjct: 559 RQIKLPTLV-ALPNEMVSFVACGYYHSVVV------------STGGRAFSFGRNDYGQLG 605
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGK 339
G K + VP VA R CG TV L+ G VY G GQLGN AD
Sbjct: 606 IGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADAL 665
Query: 340 LPNRVEGKLSKSFVE--EIACGSYHVAVLTSK 369
LP ++ + K+ ++A G Y +++ +
Sbjct: 666 LPVPLKVRPEKNSRRCVDVAAGFYTTSLIVER 697
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 24/330 (7%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GE++S G+ S G LG G D + + +I V G +T G + T G
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCG- 386
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
G G G+ + R L V I+ G H +T G +++G
Sbjct: 387 -LNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDR 445
Query: 213 GVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGH + + + +P+ +ESLK + A+ H+A + + +G+L+T+
Sbjct: 446 GQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITD------------AGELYTF 493
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G D G+LG + + P V +L VACG T+ T +G ++T G YGQL
Sbjct: 494 GMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQL 553
Query: 332 G---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G N Q KLP V L V +ACG YH V+++ +++G+ G+LG G
Sbjct: 554 GLAHNRQI--KLPTLV--ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK 609
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+N P++V + ++ CG T +
Sbjct: 610 VHQNVPNVVALSSNTRMVRATCGCYHTVLL 639
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHTAVVTSAGQL 204
SG+LY+ G +Y G LG G+++ V+ L G + + G AV+T+ G +
Sbjct: 327 SGELYSCGQNSY--GELGTGDDIERHQLTSVS--LCGWDDIRQVVSGNETLAVLTNEGVV 382
Query: 205 FTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRT--VRAACGVWHTAAVVEVMVGNSSSS 261
T G G G G + V + R V++L+ R + A+ G H A+ +
Sbjct: 383 LTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTD--------- 433
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+G ++WG D+G+LGH + K+ VP + +L + + + + +T +G +
Sbjct: 434 ---TGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGEL 490
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
YT G GQLG + ++ L + V +ACG YH + T+ E++T GK
Sbjct: 491 YTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDY 550
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG P+LV AL ++ V +ACG + +
Sbjct: 551 GQLGLAHNRQIKLPTLV-ALPNEMVSFVACGYYHSVVV 587
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
++G+L++ G ++G LG GD ++E + T + CG W + +V+ GN +
Sbjct: 326 ASGELYSCGQNSYGELGTGD--------DIE--RHQLTSVSLCG-WDD--IRQVVSGNET 372
Query: 260 SSNCSS-GKLFTWGDGDKGRLGHG---DKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ ++ G + T G G+ G G ++ L P F + G +ALT
Sbjct: 373 LAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALT 432
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKL--PNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEV 372
+G Y+ G GQLG+ K+ P +E K A SYH AV+T E+
Sbjct: 433 DTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKL--GFASVSYHHSAVITDAGEL 490
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
YT+G G+LG T +++P LV++L+ +V +ACG T IC
Sbjct: 491 YTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHT-IIC 536
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 169/353 (47%), Gaps = 32/353 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS-NMNIELVA-C 135
V ++ACG A++ + G+V++ G G+ G V + LS N + + +
Sbjct: 69 VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGN 128
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G H A+ +G+LYT G +N G LG G+ + V L G V+ + C +H
Sbjct: 129 GSEHLAALHANGNLYTVG---FNMRGQLGLGSSTTVMEATLVE-ELAGKRVADVGCSYFH 184
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
TA+V G L+ G +G LG GD R +PR VE + ACG +T A +
Sbjct: 185 TAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLR- 243
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAA----LVEPNFCRVACGH 308
G + +G D G+LG E PT +AA LV P +++CG+
Sbjct: 244 -----------DGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVP---QLSCGY 289
Query: 309 SLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
T +T G VYT G YGQLG + P RVE L++ + ++ACG YH VL+
Sbjct: 290 HHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVE-SLARMRITQVACGCYHTLVLS 348
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+V+ +G+ +G+LG + D SP L+ L++K V +A G F ++CL
Sbjct: 349 DDGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAG--FYHSVCL 399
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 146/338 (43%), Gaps = 34/338 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN----IELVACGEYHTCAVTLSGDLYTW 152
V+S+G+ + G L G +D P +D L N N + VACG T + GD+YT
Sbjct: 33 VYSFGQNTYGELALGDTTDRSAPIRVD-LGNSNHGRRVVDVACGNEQTAILFEDGDVYTC 91
Query: 153 GDGTYNFGLLGHGNEVSHWVPK-RVNGPLEGIHVSSISCG--PWHTAVVTSAGQLFTFGD 209
G +G + VP R + L I G H A + + G L+T G
Sbjct: 92 GYNDSGQCAIG----TTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGF 147
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG G +V VE L G R C +HTA V++ +G L+
Sbjct: 148 NMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMD------------NGDLY 195
Query: 270 TWGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
G D G+LG GD + +LVP V VACG T+A G V G +
Sbjct: 196 ACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDH 255
Query: 329 GQLGNPQADGKL--PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG + P R+ L + V +++CG +H AV+T VYT+G+ G+LG G
Sbjct: 256 GQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLG 315
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
P+ VE+L ++ +ACG C H V
Sbjct: 316 HKMHMARPARVESLARMRITQVACG-------CYHTLV 346
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 159/364 (43%), Gaps = 44/364 (12%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-VLHPK 120
M+++L + L V DV C H A+V G++++ G G+LG G + L P+
Sbjct: 162 MEATLVEELAGKRVADV---GCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPR 218
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGP 179
++ + VACG+++T A G + +G + GL VS P R+ P
Sbjct: 219 PVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQ--PTRLAAP 276
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L+ + V +SCG HTAVVT G ++TFG +G LG G + ++ P VESL +R +
Sbjct: 277 LDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQ 336
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG +HT + + GK+F +G + G+LG L P ++ L
Sbjct: 337 VACGCYHTLVLSD------------DGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNK 384
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS------FV 353
+VA G +V L P G+ Q G L + L+ S FV
Sbjct: 385 TVTKVAAGFYHSVCLV---------GPTEGETPPAQGSGTLNGDLRKMLNNSTRSDVTFV 435
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP--------SLVEALKDKQV 405
E H +L ++ E K +GR+ G + P +L+E L QV
Sbjct: 436 VEGRPLFAHSCILVARCE--PLEKMLDGRMKDGSLSEIIIPEYSYDVFAALMEFLYTDQV 493
Query: 406 KSIA 409
+++
Sbjct: 494 AALS 497
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G KM + P +ES + + +ACG H +++ G+VF +G + G+LG D L
Sbjct: 314 LGHKMHMARPARVESLARMRITQVACGCYHTLVLSDDGKVFPFGRNNHGQLGLETSVDCL 373
Query: 118 HPKLIDALSNMNIELVACGEYHT-CAV--------------TLSGDL 149
P+LI L N + VA G YH+ C V TL+GDL
Sbjct: 374 SPQLISTLRNKTVTKVAAGFYHSVCLVGPTEGETPPAQGSGTLNGDL 420
>gi|428182233|gb|EKX51094.1| hypothetical protein GUITHDRAFT_150990 [Guillardia theta CCMP2712]
Length = 402
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 162/364 (44%), Gaps = 40/364 (10%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
V M S P L+S + V ++A G H A ++++G V++WG G+LGHG DV P
Sbjct: 56 VCMMQSRPFMLKSMQSIFVFDVAVGVSHCAALSREGHVYTWGCGDYGKLGHGGLWDVAQP 115
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ + AL+ +ACG HT A+T + L+TWGDG Y G LGHG +P +V P
Sbjct: 116 RQVQALNKRRCIQIACGANHTLALTDNSMLWTWGDGRY--GQLGHGTWQDCGLPCKVLNP 173
Query: 180 ----LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
E + V + CG TA +TS ++ T+G+G G LGH R V +
Sbjct: 174 ESARQEHLKVRWVGCGDDFTAAITSENRMLTWGNGWHGQLGH--------ERMVMGGEAA 225
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
R R+ + + ++ + N G R +++K+
Sbjct: 226 RRKRSDVDQFFSRVPSLSLLTQTKQDNAR---------GSAARTRSNAEDSKMQEILNRL 276
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE 355
V R G+S + + G LP +V L V +
Sbjct: 277 KVYEGKMRCNLGYSPSSSTADDGRARARS---------------LPQQVH-LLRDVEVSK 320
Query: 356 IACGSYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
IACGS HV ++ V++WG+G +LGHG D+ P LV+ L+ K V S+ CG+ +
Sbjct: 321 IACGSRHVLAYSADPPRVWSWGEGEGNKLGHGTCFDQYEPKLVQELEGKTVSSMTCGSMW 380
Query: 415 TAAI 418
+A
Sbjct: 381 SAVF 384
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
P+ + L ++ + +ACG H A + +++WG+G N LGHG + PK V
Sbjct: 307 PQQVHLLRDVEVSKIACGSRHVLAYSADPPRVWSWGEGEGN--KLGHGTCFDQYEPKLVQ 364
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
LEG VSS++CG +AV + +G F +L
Sbjct: 365 -ELEGKTVSSMTCGSMWSAVFLETEEAKVYGTLPFEML 401
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
G ++ S+P++V L+ + + ACG H A + ++++WG+G+
Sbjct: 299 GRARARSLPQQVHLLRDVEVSKIACGSRHVLAY-----------SADPPRVWSWGEGEGN 347
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+LGHG + P V L + CG ++ ++ + T + VYG L
Sbjct: 348 KLGHGTCFDQYEPKLVQELEGKTVSSMTCG-----SMWSAVFLETEEAKVYGTL 396
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 51/364 (14%)
Query: 43 GDGVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG 101
G+ V G NR G G + + + P + A +++CG +H+ ++ GE++SWG
Sbjct: 150 GNQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWG 209
Query: 102 EESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGL 161
+GGR GHG ++ L P+++ AL I +A G H+ A L G +YTWG Y G
Sbjct: 210 CGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY--GQ 267
Query: 162 LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
LG+ H P ++ +E HV ++CG HT ++T+ G +++FG G LG G
Sbjct: 268 LGNNTAKKHLSPNKLR-DMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYA 326
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
P++V+ + V G +HT + + G +++WG G LG
Sbjct: 327 DSQQPKKVDLPE--HAVDIVSGYYHTLCLT------------NKGNVYSWGYMSDGALGL 372
Query: 282 GD-----KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
GD + KL+P L+ H Y+ Y +
Sbjct: 373 GDIAGHQSKPKLIP-----------------------LSHIRHNYSDSMDSYNSIYESGG 409
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG-DTDDRNSPS 395
+G P +G ++ E+IA G+++ A++T+ ++Y +G G + R+G+G +T+D++ P
Sbjct: 410 EGTNPRYAKGDVA----EKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQDIPC 465
Query: 396 LVEA 399
V++
Sbjct: 466 QVKS 469
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 23/307 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAVTLSGD-LYTW 152
+++SWG G+ S + P ++ L NM + ++A G+ H A+ G+ +Y W
Sbjct: 97 QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G +G LG G++ + P + + +S+SCG H+ +++ G+L+++G GT
Sbjct: 157 --GCNRWGQLGTGDQTNRATPTPIAIATPTV-FTSVSCGAQHSMALSNYGELYSWGCGTG 213
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G GHG P+ V +L G + A G+ H+AA G ++TWG
Sbjct: 214 GRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDL------------RGSVYTWG 261
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG+ + L P + + + + +V CG + T LT GH+Y+ G V GQLG
Sbjct: 262 WNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLG 321
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
AD + P +V+ L + V +I G YH LT+K VY+WG ++G LG GD
Sbjct: 322 VGGYADSQQPKKVD--LPEHAV-DIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGH 378
Query: 392 NS-PSLV 397
S P L+
Sbjct: 379 QSKPKLI 385
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 20/254 (7%)
Query: 149 LYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLE-GIHVSSISCGPWHT-AVVTSAGQLF 205
+Y+WG YN FG ++ +P RV + + V +++ G H A+V Q++
Sbjct: 98 IYSWG---YNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVY 154
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+G +G LG GD+ + + P + +CG H+ A+ +
Sbjct: 155 AWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMAL------------SNY 202
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+L++WG G GR GHG + L P V+ALV +A G + A G VYT G
Sbjct: 203 GELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGW 262
Query: 326 PVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YGQLGN A L PN++ + K V ++ CG H +LT++ +Y++G G+LG
Sbjct: 263 NKYGQLGNNTAKKHLSPNKLR-DMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLG 321
Query: 385 HGDTDDRNSPSLVE 398
G D P V+
Sbjct: 322 VGGYADSQQPKKVD 335
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 13/215 (6%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEVMVGNSSS 260
Q++++G FG + + +P VE L LR + A G H A+V GN
Sbjct: 97 QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHP--GN--- 151
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+++ WG G+LG GD+ + PT +A F V+CG ++AL+ G +
Sbjct: 152 ------QVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGEL 205
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
Y+ G G+ G+ L +V L + +A G H A + VYTWG
Sbjct: 206 YSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY 265
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
G+LG+ SP+ + ++ V + CG N T
Sbjct: 266 GQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHT 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSF-VEEIACGSYHV-AVLTSKTEVYTW 375
+Y+ G +GQ N Q+ +LP RVE ++ V +A G HV A++ +VY W
Sbjct: 97 QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSM 431
G G+LG GD +R +P+ + S++CG + A+ L+ W G
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRT 216
Query: 432 CSGCRLP 438
G P
Sbjct: 217 GHGSEAP 223
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 190/406 (46%), Gaps = 50/406 (12%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V +WG G G LG L+ GS F + L +ALES + +++CGG H ++ +
Sbjct: 30 VALWGNGD-QGRLG--LSESGSQF----EPVLCRALESH---EPCSVSCGGAHTLILTDK 79
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G VF+ G S G+LG + S+ P + + + +A G YH+ A+T SG+ Y WG
Sbjct: 80 GRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWG 138
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ LG + + P+++ L G+ + +++ G H+ + GQ+ ++G FG
Sbjct: 139 RNSEGQLGLGKRAKSVYITPQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197
Query: 214 VLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
LGHG+ PR + L+ L+ + G+ H+A +
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADD------------ 245
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SG ++++G G +LG G+ P + L P ++CG T A+T G +YT G
Sbjct: 246 SGTIYSFGQGSMCQLGLGNNNDASQPCPIPDL--PRVSSISCGGYHTGAITQDGDIYTWG 303
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN---- 380
S +G LG+ P R+E L+++F+ EI+CG H A + S +++WG G +
Sbjct: 304 SNEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSYGTY 361
Query: 381 --------GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G D P +E ++CG N TAAI
Sbjct: 362 ATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 50/320 (15%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGE 137
+IA G H+A + GE + WG S G+LG G S + P+ +++L+ M ++ +A G
Sbjct: 117 HIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGT 176
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN---------EVSHWVPKRVNGPLEGIHVSSI 188
H+ + +G + +W GT FG LGHG + + + P+ ++ LE + V S+
Sbjct: 177 DHSLGLAETGQVLSW--GTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIH-CLEKLQVRSV 233
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
S G H+A +G +++FG G+ LG G+ S P + L R +CG +HT
Sbjct: 234 SAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGYHTG 291
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
A+ + G ++TWG + G LG G + A P + +L E ++CG
Sbjct: 292 AITQ------------DGDIYTWGSNEHGCLGSGFR-ASSKPLRLESLAEAFMSEISCGW 338
Query: 309 SLTVALTTSGHVYTMG-SPVYGQLGNPQAD---GKL------------PNRVEGKLSKSF 352
T A+ + G++++ G YG QA+ G+L P ++ +LS
Sbjct: 339 KHTAAI-SDGYIFSWGWGGSYGTYAT-QAESSGGQLGVGTDFDFFEPVPIEMDDRLS--- 393
Query: 353 VEEIACGSYHVAVLTSKTEV 372
++CG H A + + E+
Sbjct: 394 ALHVSCGFNHTAAILEEIEI 413
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 135/303 (44%), Gaps = 48/303 (15%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+ ++WG + +G LG G R S + P+ +ES + ++ +A G H+ +
Sbjct: 132 GETYVWGRNS-EGQLGLG-KRAKSVY------ITPQKMESLAGMRLKALALGTDHSLGLA 183
Query: 93 KQGEVFSWGEESGGRLGHGV---------DSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
+ G+V SWG G LGHG D++ P++I L + + V+ G H+
Sbjct: 184 ETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACA 243
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y++G G+ LG+ N+ S P + VSSISCG +HT +T G
Sbjct: 244 DDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP-----DLPRVSSISCGGYHTGAITQDGD 298
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G G LG G R S S P +ESL +CG HTAA+
Sbjct: 299 IYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI------------- 344
Query: 264 SSGKLFTWGDGDK------------GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
S G +F+WG G G+LG G P + + V+CG + T
Sbjct: 345 SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHT 404
Query: 312 VAL 314
A+
Sbjct: 405 AAI 407
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 154/325 (47%), Gaps = 29/325 (8%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G+V +WG + G+LG G +D P L+ LS + V G H A+ G L+ WG
Sbjct: 336 GDVLAWGANNSGQLGDGDTADRSTPSLVPELSA--VTAVVGGAQHALALRKDGTLWAWGG 393
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G LGHG H VP V G +V+S++ G +H+ G ++ +G ++G
Sbjct: 394 GLA--GQLGHGGSERHVVPATVMGL---TNVTSMATGSFHSLAALEDGSVWAWGRNSYGQ 448
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG G +P V L +R V AA G+ S + G ++TWG
Sbjct: 449 LGDGTVTERHVPVRVPGLPSVRAVAAA--------------GHHSIAVAMDGTVWTWGRN 494
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
G+LG G + P V+ L + +A G S +AL + G V+ G GQLG+
Sbjct: 495 AAGQLGDGTTRDRARPVAVSGLT--SVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDG 552
Query: 335 QADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ KL P RV G + ++ +A G+Y L + V+TWG+G G+LG G R S
Sbjct: 553 TSGDKLTPVRVPGL---APIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQRLS 609
Query: 394 PSLVEALKDKQVKSIACGTNFTAAI 418
P V+ L D +++I+ G+ A+
Sbjct: 610 PVAVKGLSD--IRNISVGSAHALAV 632
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 185/392 (47%), Gaps = 42/392 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WGE G LG G ++ + LE V +A GG + +
Sbjct: 836 GTVWTWGENQ-RGQLGDGTTSA------RVAPGRVEGLEGIVA-----VAGGGDTSLALR 883
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V++WG + G++G G D L P+ I+ALS ++ ++A GE H AV G ++ W
Sbjct: 884 SDGTVWAWGANASGQVGDGTVEDRLTPRRIEALS--DVMVIALGESHALAVGEDGTVWAW 941
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G LG G E +P RV G LEG V S++ G + V G + +G
Sbjct: 942 --GANASGQLGDGGETPSLLPARVKG-LEG--VGSVAAGRAFSLAVRDDGTAWAWGANES 996
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G +S +P V S+KGLR V A G H A+ E G ++ WG
Sbjct: 997 GQLGDGSNQSRRVPHRVASVKGLRAVSA--GAHHAMALGE------------DGAVWAWG 1042
Query: 273 DGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
D G+LG G ++ P VA L + VA G +VA+ G ++ GS YGQL
Sbjct: 1043 DNTLGQLGDGTSAFTVMWPQRVAEL--SDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQL 1100
Query: 332 GNPQADGKL-PNRVE--GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G+ + +L P V+ G +++ V A G + VA++ T + WG A G+LG G T
Sbjct: 1101 GDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGT-LQAWGDNATGQLGDGTT 1159
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
R+SP + + +V +++ G + A+ L
Sbjct: 1160 TRRSSPGEIRGV--TRVTAVSTGAWHSLALRL 1189
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 165/346 (47%), Gaps = 33/346 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V + G+HA + G + +WG+ + G+LG G + P I ++ + V+ G
Sbjct: 1124 VVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTR--VTAVSTGA 1181
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHTA 196
+H+ A+ L G ++ WG FG LG G + VP P++G+ V +I+ G +H+
Sbjct: 1182 WHSLALRLDGTVWAWG--ANGFGQLGDGTTTARAVPV----PVQGLRDVVAIAAGGYHSV 1235
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
V S G ++T+G TFG LG G +S ++P +V L+G++ V G H+ A+
Sbjct: 1236 AVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVTG--GDHHSLAL------ 1287
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+ G + WG G+LG G + + P + + V G + TVAL
Sbjct: 1288 ------HADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDV--DGLTEVRAGAAHTVALGK 1339
Query: 317 SGHVYTMGSPVYGQLGNPQADGKL---PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G V+T G +GQLG+ ++ P V G + + I G++H + +
Sbjct: 1340 DGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPAAT---AIGAGAWHSFASGPEEGAF 1396
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
TWG+ ++G+LG GD R P ++ L +K IA G + + A+
Sbjct: 1397 TWGRNSHGQLGVGDNAPRAEPQRMKLLSG--LKVIAGGADTSLAMT 1440
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 169/378 (44%), Gaps = 36/378 (9%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV--LHPKL 121
S +A+ A L IA G +H+ + G V++WG S G+LG G D+ L P
Sbjct: 54 SRAAQAIRLAEPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLG-GADTSFQRLSPAR 112
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+ L +I V G+ H+ A+ G ++TW G+ + G LG G P+RV G +
Sbjct: 113 LPVLE--DIVSVVSGDAHSLALGADGTVWTW--GSNSSGQLGDGTTTDRAEPQRVEGFTD 168
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V +++ G +H+ V+ S G ++ +G G LG G ++ P+ V L+G+ V A
Sbjct: 169 ---VVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPKPVPGLEGV--VALA 223
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
G T AV + G + +WG G+LG G +L P + L
Sbjct: 224 AGFDFTLAV------------HADGAVSSWGANSFGQLGLGTFTQRLSPERIPTL--SGI 269
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGS 360
VA G VAL G V+T GS GQLG+ D +P + G V + GS
Sbjct: 270 TSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGS 329
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI-- 418
L +V WG +G+LG GDT DR++PSLV L V ++ G A+
Sbjct: 330 L---ALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPEL--SAVTAVVGGAQHALALRK 384
Query: 419 --CLHKWVSGVDQSMCSG 434
L W G+ + G
Sbjct: 385 DGTLWAWGGGLAGQLGHG 402
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 176/383 (45%), Gaps = 44/383 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G G LGG + F + LP V+ D+ ++ G H+ +
Sbjct: 85 GAVWAWG-GNSAGQLGG----ADTSFQRLSPARLP------VLEDIVSVVSGDAHSLALG 133
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V++WG S G+LG G +D P+ ++ + ++ VA G++H+ + G ++ W
Sbjct: 134 ADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFT--DVVAVAAGDFHSLVLKSDGTVWAW 191
Query: 153 GDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
G NF G LG G+ + PK V G LEG V +++ G T V + G + ++G +
Sbjct: 192 G---TNFHGQLGQGHTQTGLWPKPVPG-LEG--VVALAAGFDFTLAVHADGAVSSWGANS 245
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
FG LG G P + +L G+ +V A G +H A+ G ++TW
Sbjct: 246 FGQLGLGTFTQRLSPERIPTLSGITSV--AAGTYHAVAL------------GKDGTVWTW 291
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQ 330
G G+LG G + VP A L R VA + ++AL G V G+ GQ
Sbjct: 292 GSNSSGQLGDGTWNDRAVP---APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQ 348
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ AD P+ V S V + G+ H L ++ WG G G+LGHG ++
Sbjct: 349 LGDGDTADRSTPSLVP---ELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSE 405
Query: 390 DRNSPSLVEALKDKQVKSIACGT 412
P+ V L + V S+A G+
Sbjct: 406 RHVVPATVMGLTN--VTSMATGS 426
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 156/362 (43%), Gaps = 38/362 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+ T G LG G S F V + A + DV+++A G + + V
Sbjct: 1036 GAVWAWGDNT-LGQLGDGT----SAFTVMWPQRV------AELSDVESVAAGEQFSVAVA 1084
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY--HTCAVTLSGDLY 150
G FSWG G+LG G L P + + +V G + H A+ G L
Sbjct: 1085 HDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQ 1144
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WGD G LG G P + G V+++S G WH+ + G ++ +G
Sbjct: 1145 AWGDNAT--GQLGDGTTTRRSSPGEIRGV---TRVTAVSTGAWHSLALRLDGTVWAWGAN 1199
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LG G + ++P V+ L+ V A G +H+ AV S G ++T
Sbjct: 1200 GFGQLGDGTTTARAVPVPVQGLR--DVVAIAAGGYHSVAV------------RSDGTVWT 1245
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G E++ +P V L V G ++AL G V G GQ
Sbjct: 1246 WGYNTFGQLGDGTSESRALPVQVHKL--EGVQAVTGGDHHSLALHADGTVSGWGHNASGQ 1303
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ + D P R++ + E+ G+ H L V+TWG A+G+LG G T
Sbjct: 1304 LGDGSRTDRYTPVRLK---DVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTG 1360
Query: 390 DR 391
R
Sbjct: 1361 PR 1362
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 171/410 (41%), Gaps = 58/410 (14%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G D P+ +E+ + DV IA G HA V + G V++WG + G+LG G ++ L
Sbjct: 902 GTVEDRLTPRRIEA--LSDVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLL 959
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P + L + VA G + AV G + W G G LG G+ S VP RV
Sbjct: 960 PARVKGLE--GVGSVAAGRAFSLAVRDDGTAWAW--GANESGQLGDGSNQSRRVPHRVA- 1014
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRT 237
++G+ ++S G H + G ++ +GD T G LG G +V P+ V L + +
Sbjct: 1015 SVKGLR--AVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELSDVES 1072
Query: 238 VRA----ACGVWHTAAV----------------------VEVMVGNSSSSNC-------- 263
V A + V H EV +G S +
Sbjct: 1073 VAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQ 1132
Query: 264 ------SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+ G L WGD G+LG G + P + + HSL AL
Sbjct: 1133 HAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSL--ALRLD 1190
Query: 318 GHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G+ +GQLG+ + +P V+G V IA G YH + S V+TWG
Sbjct: 1191 GTVWAWGANGFGQLGDGTTTARAVPVPVQGLRD---VVAIAAGGYHSVAVRSDGTVWTWG 1247
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
G+LG G ++ R P V+ K + V+++ G + + A+ VSG
Sbjct: 1248 YNTFGQLGDGTSESRALP--VQVHKLEGVQAVTGGDHHSLALHADGTVSG 1295
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 173/435 (39%), Gaps = 87/435 (20%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG G LG G R D + P A+ + V IA GG H +
Sbjct: 486 GTVWTWGR-NAAGQLGDGTTR---------DRARPVAVSG--LTSVLAIAAGGSHVLALR 533
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+V++WG + G+LG G D L P + L+ I+ VA G Y + A+ G ++TW
Sbjct: 534 SDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAP--IQSVAAGTYFSMALANDGTVWTW 591
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G+G G LG G V P V G + + +IS G H V G ++ +GD
Sbjct: 592 GEGFE--GQLGDGGGVQRLSPVAVKGLSD---IRNISVGSAHALAVRGDGTVWAWGDNNE 646
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG G P +V +L G+ V + G H+ A+ + G + WG
Sbjct: 647 GQLGDGSWMDRFAPVQVRNLTGITAV--SGGRSHSLAL------------HADGTVRAWG 692
Query: 273 DGDKGRLGHGDKEAKLVPTCVAAL-----VEPNFC------------------------- 302
G+LG G ++++P+ + L + P
Sbjct: 693 SNGYGQLGDGTLTSRVLPSVIPGLSGIQALHPGHLHVLALHADKTLRGWGYNRFGQLGLG 752
Query: 303 ------------------RVACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNR 343
R+A G + + + G V G+ GQLG+ G
Sbjct: 753 AAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTHGARAVT 812
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
V G S +A G H VL V+TWG+ G+LG G T R +P VE L+
Sbjct: 813 VRGV---SCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEG- 868
Query: 404 QVKSIACGTNFTAAI 418
+ ++A G + + A+
Sbjct: 869 -IVAVAGGGDTSLAL 882
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 167/369 (45%), Gaps = 33/369 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG + G LG N + ++SS+P + + + ++ G H+ V
Sbjct: 68 GNIYAWGYNS-SGQLGN--NSI-------LNSSVPVLVSTPDGVTFTQVSAGADHSLAVG 117
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA---LSNMNIELVACGEYHTCAVTLSGDL 149
G ++WG + GRLG+G + P L+ A S + I V G +H+ AV +GD+
Sbjct: 118 SDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDI 177
Query: 150 YTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVVTSAGQLFT 206
Y+WG YN G LG G ++ VP +V+ G+ S +S G H+ + S G+ +
Sbjct: 178 YSWG---YNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYA 234
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G+ G LG G P V + G+ + + G H+ AV S G
Sbjct: 235 WGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAV------------GSDG 282
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
K + WG+ D G+LG+ + L P V+ + +V+ G ++A+ G+ Y G
Sbjct: 283 KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLN 342
Query: 327 VYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
V GQLGN +P V +F I G H S YTWG + G+LG+
Sbjct: 343 VNGQLGNNTITTSTVPVMVTAPDGVTF-TRIEAGGLHSLTAASDENTYTWGANSFGQLGN 401
Query: 386 GDTDDRNSP 394
G +D P
Sbjct: 402 GTSDGSLVP 410
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 19/336 (5%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H+ + G +++WG S G+LG+ + P L+ + V+ G H+
Sbjct: 54 VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL--EGIHVSSISCGPWHTAVV 198
AV G+ Y WG T G LG+G VP V+ G+ +S + G +H+ V
Sbjct: 114 LAVGSDGNAYAWGRNTD--GRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAV 171
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES---LKGLRTVRAACGVWHTAAVVEVMV 255
S G ++++G G LG G + S+P +V + G+ + + G H+ A+
Sbjct: 172 GSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI----- 226
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
S+GK + WG+ G+LG G P V+A +F +V+ G ++A+
Sbjct: 227 -------GSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVG 279
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
+ G Y G+ GQLGN L + + V +++ G+ H + + Y W
Sbjct: 280 SDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAW 339
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
G NG+LG+ P +V A I G
Sbjct: 340 GLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAG 375
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 32/300 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCF-GVKMDSSLPKALESAVV---LDVQNIACGGRHA 88
GD++ WG NR G G + SS+P + + V + ++ G RH+
Sbjct: 175 GDIYSWG-----------YNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHS 223
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
+ G+ ++WGE GG+LG G S P L+ A + ++ V+ G+ H+ AV G
Sbjct: 224 LAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVGSDGK 283
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
Y WG+ + G LG+ S P V+ P+ G+ V+ +S G H+ + + G + +G
Sbjct: 284 AYAWGNN--DSGQLGNATTTSSLAPVLVS-PMGGLAVTQVSAGADHSLAIGADGNAYAWG 340
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LG+ + ++P V + G+ R G H S + S
Sbjct: 341 LNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLH------------SLTAASDENT 388
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG G+LG+G + LVP ++ P V+ G + L+ S +T+ +P +
Sbjct: 389 YTWGANSFGQLGNGTSDGSLVPVAISRF--PVITEVSFGGVVGTELSQSNGSWTVVAPAH 446
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 147/331 (44%), Gaps = 37/331 (11%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
E F G +GG GV V+ + V+ G H+ A+ G++Y WG
Sbjct: 29 ETFGSGPTAGGTTVSGVLPGVVFTQ------------VSAGINHSLAMGSDGNIYAWG-- 74
Query: 156 TYNF-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
YN G LG+ + ++ VP V+ P +G+ + +S G H+ V S G + +G T G
Sbjct: 75 -YNSSGQLGNNSILNSSVPVLVSTP-DGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGR 132
Query: 215 LGHGDRKSVSIPREVES---LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG+G S+P V + G+ + G +H+ AV S+G +++W
Sbjct: 133 LGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAV------------GSNGDIYSW 180
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEP---NFCRVACGHSLTVALTTSGHVYTMGSPVY 328
G G+LG G A VP V+A P F +V+ G ++A+ ++G Y G
Sbjct: 181 GYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARG 240
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
GQLG + P V SF +++ G H + S + Y WG +G+LG+
Sbjct: 241 GQLGIGSISRTPAPALVSAPAGVSF-TQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNAT 299
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
T +P LV + V ++ G + + AI
Sbjct: 300 TTSSLAPVLVSPMGGLAVTQVSAGADHSLAI 330
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 198/425 (46%), Gaps = 44/425 (10%)
Query: 9 FRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP 67
+VS +A+++ + G GH + G ++ WG+ NR G G+ + ++
Sbjct: 454 MQVSGLAAITALATGDGHSVAVGSDGGIWAWGD-----------NRRGQ-LGIGITATRE 501
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
+++ + + +A G H+ + G V++WG + G+LG G D + L++
Sbjct: 502 IPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTD 561
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
I +A G +H+ A+ G ++ WG + +FG LG G S P +V+G L + +
Sbjct: 562 --ITALAAGNHHSLALRNDGTVWVWG--SNDFGQLGDGTVTSRKTPVQVSG-LSAMR--A 614
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+ GP H+ V G ++ +G+ FG LG G S ++P +V L G+ V A GV+H+
Sbjct: 615 VEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYHS 672
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A+ + G L+ WG + G+LG+G + P V L G
Sbjct: 673 LAL------------RNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNG 720
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVL 366
HSL AL T G V+ G+ +GQLG+ + P +V G + V + G+++ L
Sbjct: 721 HSL--ALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLTN---VIALNAGAFYTVAL 775
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK--WV 424
S+ V+ WG + G+LG G + +P V L D V ++A G A+ + W
Sbjct: 776 RSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTD--VTALAAGNAHALALRTDRTVWA 833
Query: 425 SGVDQ 429
G +Q
Sbjct: 834 WGGNQ 838
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 27/321 (8%)
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
+ D+ +A G H+ + G V+ WG G+LG G + P + LS M V
Sbjct: 559 LTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAM--RAVE 616
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G H+ AV L+G ++ WG+ +FG LG G S +P +V+G L G V++++ G +H
Sbjct: 617 AGPAHSVAVHLNGTVWVWGN--NDFGQLGDGTVTSRAMPVQVSG-LTG--VTAVAVGVYH 671
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + + G L+ +G G LG+G S P +V L G+ + A G H+ A+
Sbjct: 672 SLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNG--HSLAL---- 725
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ G ++ WG G+LG G + PT V L N + G TVAL
Sbjct: 726 --------RTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLT--NVIALNAGAFYTVAL 775
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+ V+ GS GQLG+ K P +V G + V +A G+ H L + V+
Sbjct: 776 RSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGL---TDVTALAAGNAHALALRTDRTVW 832
Query: 374 TWGKGANGRLGHGDTDDRNSP 394
WG G++G G +P
Sbjct: 833 AWGGNQRGQIGDGTASIMPAP 853
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 155/360 (43%), Gaps = 54/360 (15%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H + + G V++WG G+LG+G +D P + L+ ++ VA E H+
Sbjct: 148 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHS 205
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+ G ++ WGD Y G LG G + P +V G L G V++++ G T V S
Sbjct: 206 LALRSDGTVWAWGDNGY--GQLGDGTKAQRTTPVQVLG-LAG--VTALAAGGNGTTVAIS 260
Query: 201 A--------GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
A G ++ +GD + G LG G + P +V GL +V A A G +H+ A+
Sbjct: 261 AHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQV---LGLTSVTALAAGAFHSLALR 317
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG---- 307
+ G ++ WG+ G+LG G A+ P V L + VA G
Sbjct: 318 D------------DGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLT--SVIAVAAGGGDD 363
Query: 308 -------HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV--EEIAC 358
HSL AL + G V+ G + Q G DG R +
Sbjct: 364 SLGMRGDHSL--ALKSDGTVWAWGYNLSRQFG----DGMPATRTTPVQVSELTGGTALVA 417
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G H VL S V+ WG ++G+LG G T R P V L + ++A G + A+
Sbjct: 418 GDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGL--AAITALATGDGHSVAV 475
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 172/401 (42%), Gaps = 52/401 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR------ 86
G V+ WG+ G G LG G K + P ++ + V +A GG
Sbjct: 212 GTVWAWGD-NGYGQLGDG---------TKAQRTTP--VQVLGLAGVTALAAGGNGTTVAI 259
Query: 87 --HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
H+ + G V++WG+ S G+LG G ++ P + L ++ +A G +H+ A+
Sbjct: 260 SAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALR 317
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS------SISCGPWHTAVV 198
G ++ WG+ + G LG G + P +V G I V+ S+ H+ +
Sbjct: 318 DDGTVWAWGNNSS--GQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLAL 375
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G ++ +G G G + + P +V L G + A G H A V++
Sbjct: 376 KSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVA--GDLH-AVVLK------ 426
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
S G ++ WGD G+LG G + P V+ L GHS VA+ + G
Sbjct: 427 -----SDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHS--VAVGSDG 479
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
++ G GQLG A ++P + G S + +A G H L V+TWG
Sbjct: 480 GIWAWGDNRRGQLGIGITATREIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTWGS 536
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
A G+LG G DR + + V L D + ++A G + + A+
Sbjct: 537 NAYGQLGDGTAIDRATAAQVPGLTD--ITALAAGNHHSLAL 575
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 45/252 (17%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ + G H+ V+ G V+ WG G+LG G + P + L+ + VA G
Sbjct: 612 MRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTG--VTAVAVGV 669
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YH+ A+ G L+ WG N G LG+G P +V G L G V +++ G H+
Sbjct: 670 YHSLALRNDGTLWAWG--YNNVGQLGNGTSGIQSTPAQVPG-LTG--VIALAAGNGHSLA 724
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC----------GVWHT 247
+ + G ++ +G +FG LG G S P +V L + + A VW
Sbjct: 725 LRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLTNVIALNAGAFYTVALRSERSVWEW 784
Query: 248 AA-------------------------VVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGH 281
+ V + GN+ + + + ++ WG +G++
Sbjct: 785 GSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQI-- 842
Query: 282 GDKEAKLVPTCV 293
GD A ++P V
Sbjct: 843 GDGTASIMPAPV 854
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 42/362 (11%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEY 138
++ACGG H + + G VF+ G G+LG G + +L P I +E V+ G +
Sbjct: 68 SLACGGAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVE-VSAGNH 126
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H+CAVT G L+ WG + LG G P +V+ L + V +++ G H+ V
Sbjct: 127 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVD-CLTDLRVKTVALGSEHSIAV 185
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHTAA 249
T G++ ++G G LGHG + S+ PR +++ G++ + A G+ H+A
Sbjct: 186 TEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSAC 245
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E G LF +G K G G + P V + P VACG
Sbjct: 246 IDE------------KGTLFIFGQ--KTEKGFGRPNEEFRPNIVEEI--PFSEEVACGGY 289
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T +T SG +Y+ GS G LG D + P ++ L K V +++CG H AV+ S
Sbjct: 290 HTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVV-S 348
Query: 369 KTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
++YTWG G + G+LGHG+ D P +V + + ++CG N T
Sbjct: 349 GDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNHTG 408
Query: 417 AI 418
AI
Sbjct: 409 AI 410
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 151/335 (45%), Gaps = 36/335 (10%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIE---LVACGEYHTCAVTLSGDLYTWGDGT 156
WG GRLG G P + + +ACG HT +T +G ++ G
Sbjct: 33 WGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGRVFA--TGL 90
Query: 157 YNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+FG LG G V+H + P ++G E V +S G H+ VT+ G+LF +G + G L
Sbjct: 91 NDFGQLGIGTSVTHMLEPVEISGFHE--RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQL 148
Query: 216 G--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
G G K VS P +V+ L LR A G H+ AV E G++ +WG
Sbjct: 149 GLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTE------------EGEVLSWGA 196
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCR---------VACGHSLTVALTTSGHVYTMG 324
GRLGHG + + L + + P + +A G + + G ++ G
Sbjct: 197 AGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFG 256
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G P + + PN VE F EE+ACG YH V+T ++Y+WG NG LG
Sbjct: 257 QKTEKGFGRPNEEFR-PNIVE---EIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLG 312
Query: 385 HGDTDDRNSPSLVE-ALKDKQVKSIACGTNFTAAI 418
G TD SP +++ +L V ++CG TA +
Sbjct: 313 LGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVV 347
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 130/297 (43%), Gaps = 32/297 (10%)
Query: 31 ALGDVFIWGEGTGDGV-LGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
A G +F+WG +G + LG G +V S P ++ L V+ +A G H+
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKV---------VSTPTKVDCLTDLRVKTVALGSEHSI 183
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDALSNMNIELVACGEYHT 140
V ++GEV SWG GRLGHG S +L P+LI + I+ +A G H+
Sbjct: 184 AVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHS 243
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ G L+ +G T G G + P V E ++CG +HT VVT
Sbjct: 244 ACIDEKGTLFIFGQKTEK----GFGRPNEEFRPNIVE---EIPFSEEVACGGYHTCVVTD 296
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVV--EVMVGN 257
+G L+++G G LG G V P ++ SL L + +CG HTA V ++
Sbjct: 297 SGDLYSWGSNENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWG 356
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+N G F G G+LGHG+ P V V+CG + T A+
Sbjct: 357 WGGAN---GTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNHTGAI 410
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 117/235 (49%), Gaps = 17/235 (7%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG-LRTV 238
L + S++S G H A VT G ++T+G G +G LGHGD IP+ V +KG +++V
Sbjct: 270 LRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGEVKSV 329
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
A G +HT AV G LFTWGDG +G+LGH D +L+PT VAA +E
Sbjct: 330 SA--GFYHTVAVTH------------HGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIE 375
Query: 299 PNFCRVAC--GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEI 356
A G S T+ L G V++ GS G+LG+ + + L I
Sbjct: 376 WGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSI 435
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
A G H LT + ++YTWG G GRLGHG D P + + +K+IA
Sbjct: 436 AAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVA 490
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 137/270 (50%), Gaps = 22/270 (8%)
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+ L + ++ G H AVT +G +YTWG G Y G LGHG++V +P+ V P
Sbjct: 267 LSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRY--GQLGHGDDVDKIIPQPV--PRI 322
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVR 239
V S+S G +HT VT G LFT+GDG G LGH D IP V + G+
Sbjct: 323 KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAA 382
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A G HT +V N G++F++G GD GRLGHG+ + PT ++AL
Sbjct: 383 AQAGGSHT------LVLNRR------GQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESE 430
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-- 356
+A G + +VALT G +YT G G+LG+ +D LP ++ +S ++ I
Sbjct: 431 RCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKL-ALISHDTIKAIAV 489
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
A G H + S+ + T G+ ++GR+ G
Sbjct: 490 AAGEAHTCIFRSEGSLITLGRVSHGRMAEG 519
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 30/268 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+G G LG G + +D +P+ + + +V++++ G H V
Sbjct: 292 GLVYTWGQGR-YGQLGHGDD---------VDKIIPQPVPR-IKGEVKSVSAGFYHTVAVT 340
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN--MNIELVACGEYHTCAVTLSGDLY 150
G +F+WG+ G+LGH ++ L P L+ A M + G HT + G ++
Sbjct: 341 HHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVF 400
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
++G G + G LGHGN+ W P ++ LE SI+ G H+ +T GQ++T+G G
Sbjct: 401 SFGSG--DSGRLGHGNDNDQWSPTFLSA-LESERCVSIAAGFAHSVALTDQGQIYTWGCG 457
Query: 211 TFGVLGHGDRKSVSIPREVE--SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LGHG +PR++ S ++ + A G HT S G L
Sbjct: 458 KLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFR------------SEGSL 505
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
T G GR+ G ++ T A+
Sbjct: 506 ITLGRVSHGRMAEGSCAQDMLDTLHTAI 533
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
Query: 221 KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLFTWGDGDKGRL 279
K+V S+K R RA + + G + + +G ++TWG G G+L
Sbjct: 246 KTVLQSASFNSIKKHRVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQL 305
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADG 338
GHGD K++P V ++ V+ G TVA+T G ++T G G+LG N A
Sbjct: 306 GHGDDVDKIIPQPVPR-IKGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQR 364
Query: 339 KLPNRVEGKLSKSF-VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV 397
+P V + V G H VL + +V+++G G +GRLGHG+ +D+ SP+ +
Sbjct: 365 LIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFL 424
Query: 398 EALKDKQVKSIACGTNFTAAI 418
AL+ ++ SIA G + A+
Sbjct: 425 SALESERCVSIAAGFAHSVAL 445
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 28/348 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL +N++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKT 370
LT G V+T G GQLG +P + + P VE + V ++ CGSYH +A + +
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTG 307
Query: 371 EVYTWGKGAN--GRLGHGD--TDDRNSPSLV--EALKDKQVKSIACGT 412
+V ++G G + G+ H + T++ + L+ E L QVK I GT
Sbjct: 308 QVVSFGHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVKHIFAGT 355
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L+V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAPRG-----ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+ + I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGAEHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V +++ +V CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLV-EIIDGLVSQVDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTGKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C ++ + + G AN H DT +P
Sbjct: 325 PEA-LTENF--DISCLISAEDLVGVQVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + + A GE H+ + + + + GD + G LG
Sbjct: 6 GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAPRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE ++V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLAL------------SKDSQVFSWGKNSHGQLGLGKEFPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG+ H AVLT +V+T+G +G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEII-DGL 288
Query: 405 VKSIACGTNFTAA 417
V + CG+ T A
Sbjct: 289 VSQVDCGSYHTLA 301
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 31/283 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G +K S
Sbjct: 71 ALETLNVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------ELKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDC 294
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGD 283
G +HT A V ++G++ ++G G D G+ H +
Sbjct: 295 GSYHTLAYVH-----------TTGQVVSFGHGPSDTGKPTHPE 326
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 37/360 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG G DG LG G + L +++ +V+++ G R++ +
Sbjct: 7 VIAWGSGE-DGQLG---------LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++F+WG G LGH ++ P L+ +L+N+ I A G +H AV G Y WG
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWG 116
Query: 154 DGTY-NFGLLGHGNEVSHWVPKRVNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y G +E V + + P + + V ++ G H+ V+T G ++T+G
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GD K +S+P V+ L+ +R + A G +H A+ E G L+
Sbjct: 177 ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALKE------------DGTLW 218
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG+ + G+LG GD + + P V L + +A G + ALT G VY G +G
Sbjct: 219 AWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 330 QLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+LG N ++ LP +V L + +++CG H LT ++++G+G +GRLG+G
Sbjct: 279 RLGFGDNDKSSKMLPQKVN-LLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 149/332 (44%), Gaps = 50/332 (15%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG---------EESGGRLGHGVDS 114
S P ++S + + A G H V+ QG ++WG E S G V
Sbjct: 79 ESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D++ PK + + VA G H+ +T G ++TWG + G + ++S VP
Sbjct: 139 DIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ-PWPPGDI---KQIS--VPV 190
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
RV G LE + + I+ G +H + G L+ +G+ +G LG GD + S P V+ L
Sbjct: 191 RVQG-LENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDD 247
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
L V A G WH+ A+ + G+++ WG G+ GRLG GD K +K++P
Sbjct: 248 LTLVDIAAGGWHSTALT------------NEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----------------PQA 336
V L + +V+CG + +VALT G +++ G +G+LG P
Sbjct: 296 VNLLPGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPP 355
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+G+ + E K + +ACG H +
Sbjct: 356 EGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 138/334 (41%), Gaps = 35/334 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V +WG G+LG G D + ++DAL N+ V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--W 64
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LGH E + L + + + G WH V G+ + +G +G G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 217 HGD---------RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
R+ + IP+ +R V A G S G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAG--------------GTHSVVLTREGY 170
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG GD + VP V L V H+L AL G ++ G+
Sbjct: 171 VWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNL--ALKEDGTLWAWGNNE 224
Query: 328 YGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YGQLG + P V+G + V+ IA G +H LT++ EVY WG+G +GRLG G
Sbjct: 225 YGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 387 DTDDRNS--PSLVEALKDKQVKSIACGTNFTAAI 418
D D + P V L + + ++CG + A+
Sbjct: 284 DNDKSSKMLPQKVNLLPGEDIIQVSCGGTHSVAL 317
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 41/274 (14%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
V+ D +PK A L V+ +A GG H+ ++ ++G V++WG+ G + P
Sbjct: 136 VRRDIVIPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQP----WPPGDIKQISVP 189
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ L N + L+A G +H A+ G L+ WG+ Y G LG G+ P V G
Sbjct: 190 VRVQGLEN--VRLIAVGAFHNLALKEDGTLWAWGNNEY--GQLGTGDTQPRSYPIPVQG- 244
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSIPREVESLKGLRT 237
L+ + + I+ G WH+ +T+ G+++ +G G G LG GD + S +P++V L G
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDI 304
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
++ +CG H+ A+ G++F++G GD GRLG+G K P + +
Sbjct: 305 IQVSCGGTHSVALTR------------DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHI 352
Query: 298 EPNFCR----------------VACGHSLTVALT 315
P R VACG T+A+
Sbjct: 353 PPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIV 386
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
S+ + WG G+ G+LG G E K + + V AL N V G ++A+ G ++T
Sbjct: 2 ASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFT 61
Query: 323 MGSPVYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G G LG+P P+ V+ L+ + + A G++H + + Y WG
Sbjct: 62 WGWNQRGTLGHPPETKTESTPSLVK-SLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEY 120
Query: 381 GRLGHGDTDDR 391
G+ G + D
Sbjct: 121 GQCGEEPSKDE 131
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ S T V WG G +G+LG G +++ S+V+AL+ V+S+ G+ + AIC
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC 54
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 27/338 (7%)
Query: 42 TGDGV-LGGGLNRVGSC----FGVKMDSSLP-KALESAVVLDVQNIACGGRHAALVNKQG 95
T DGV L GLN+ G C F ++ P +AL S V + N + G H + G
Sbjct: 397 TSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYI-NASNGCEHLIAITDTG 455
Query: 96 EVFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+SWG G+LGH V + + PKLI+++ ++ A +H+ V++SG+LYT+G
Sbjct: 456 LAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGM 515
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LG + P+ V L G HVS +SCG +H + T +G++FT G G
Sbjct: 516 N--DCGQLGLDHTQHQSTPQLVKALL-GHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQ 572
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG G K V +P +V L ACG +H A+ S+G +++G
Sbjct: 573 LGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAIT------------STGLTYSFGRN 619
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
D G+LG G K + +P + ACG T+ ++ SG V+ G GQLGN
Sbjct: 620 DYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNR 679
Query: 335 -QADGKLPNRVEGKLSKSFVE--EIACGSYHVAVLTSK 369
D LP ++ + K+ IA G Y +++ +
Sbjct: 680 GNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVER 717
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 171/359 (47%), Gaps = 37/359 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELV--A 134
++ + G A++ G V + G G+ GHG D V+ + I AL + ++ + +
Sbjct: 383 IRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINAS 442
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNE-VSHWVPKRVNGPLEGIHVSSISCGP 192
G H A+T +G Y+WG YN G LGH N ++PK + E + S +
Sbjct: 443 NGCEHLIAITDTGLAYSWG---YNDRGQLGHENVGTKLYLPKLIESIKEK-KMKSAAVSY 498
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+A+V+ +G+L+TFG G LG + S P+ V++L G +CG++H
Sbjct: 499 HHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVL--- 555
Query: 253 VMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN--FCRVACGHS 309
C+ SG++FT G D G+LG G + VPT V V PN C VACG+
Sbjct: 556 ----------CTISGEVFTCGKNDHGQLGLGHNKQVKVPTQV---VLPNELVCFVACGYY 602
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKL---SKSFVEEIACGSYHVAVL 366
A+T++G Y+ G YGQLG K+ + L S + + ACG YH ++
Sbjct: 603 HATAITSTGLTYSFGRNDYGQLG---IGSKIHQNIPIALTISSNTRMVHAACGCYHTLLM 659
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS---IACGTNFTAAICLHK 422
+ +V+ +G+ G+LG+ D P ++ +K ++ IA G T+ I K
Sbjct: 660 SDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVERK 718
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 145/321 (45%), Gaps = 29/321 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC- 135
+Q+IA G ++ K G VF+ G G+ G G D ++ P I ALS + I +VA
Sbjct: 3168 IQSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAAS 3227
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGP 192
G H A++ G +Y+WG YN G LG G VS P+ + E ++ +
Sbjct: 3228 NGCEHMLAISHDGAVYSWG---YNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSY 3284
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+AVV++ G L TFG G LG + P+ VE+L + R ACG++HT A+V+
Sbjct: 3285 HHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD 3344
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP---------NFCR 303
G ++++G + G+LG + VP V P +
Sbjct: 3345 ------------DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQ 3392
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
V CG+ TV + G V T G YGQLG + K + S V+ +CG YH
Sbjct: 3393 VYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHT 3452
Query: 364 AVLTSKTEVYTWGKGANGRLG 384
+L +G+ G+LG
Sbjct: 3453 LLLLVNGRPMVFGRNNKGQLG 3473
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 168/412 (40%), Gaps = 57/412 (13%)
Query: 45 GVLGGGLNRVGSC----FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
V GLN+ G C F ++ P S + + + + G H ++ G V+SW
Sbjct: 3186 AVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSW 3245
Query: 101 GEESGGRLGHGVDSDVLH-PKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN 158
G G+LG G H P++I++L I A +H+ V+ +GDL T+G +
Sbjct: 3246 GYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMN--D 3303
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG + P+ V L V ++CG +HT + G +++FG +G LG
Sbjct: 3304 SGQLGLDHTQHQHTPQLVET-LSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLS 3362
Query: 219 DRKSVSIPREVESLKGLRT---------VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
++ +P V+ RT V+ CG +HT ++E GK+
Sbjct: 3363 HTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILEC------------GKVV 3410
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG D G+LG G KE K + V + R +CG T+ L +G G G
Sbjct: 3411 TWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKG 3470
Query: 330 QLGN-----PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL- 383
QLG P AD LP + S V I+ G Y +LT GK AN +L
Sbjct: 3471 QLGVASRSLPSADLPLPIPLHPLSSDEVV-YISAGFYCSYILT--------GKEANDQLQ 3521
Query: 384 --GHGDTDD----------RNSPSLVEALKDKQVKSIACGTNFTAAICLHKW 423
G T++ R S L + L + C TA C+ +
Sbjct: 3522 AMGGNPTENPAEEMTSRTCRTSEKLFQDLMKQMDHYSECMQKLTAQTCISAY 3573
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 148/327 (45%), Gaps = 24/327 (7%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GE++S G+ S G LG G D + + +I V G +T G + T G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGL 407
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGPWHTAVVTSAGQLFTFGDGTF 212
G GHGN + R L V I S G H +T G +++G
Sbjct: 408 N--KSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465
Query: 213 GVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGH + + +P+ +ES+K + +++A +H +A+V V SG+L+T+
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKE-KKMKSAAVSYHHSALVSV-----------SGELYTF 513
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G D G+LG + + P V AL+ + V+CG V T SG V+T G +GQL
Sbjct: 514 GMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQL 573
Query: 332 G---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G N Q K+P +V L V +ACG YH +TS Y++G+ G+LG G
Sbjct: 574 GLGHNKQV--KVPTQV--VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK 629
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFT 415
+N P + + ++ ACG T
Sbjct: 630 IHQNIPIALTISSNTRMVHAACGCYHT 656
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 132/277 (47%), Gaps = 22/277 (7%)
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLF 205
G+LY+ G +Y G LG G+++ + + PL G H+ + G A++TS G +
Sbjct: 348 GELYSCGQNSY--GELGLGDDIERH--QLTSVPLCGWDHIRQVVSGNEILAILTSDGVVL 403
Query: 206 TFGDGTFGVLGHGD-RKSVSIPREVESLKGLRT--VRAACGVWHTAAVVEVMVGNSSSSN 262
T G G GHG+ + V + R +++L+ R + A+ G H A+ +
Sbjct: 404 TCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITD---------- 453
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G ++WG D+G+LGH + KL +P + ++ E A + + ++ SG +Y
Sbjct: 454 --TGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELY 511
Query: 322 TMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
T G GQLG + ++ L V ++CG YH+ + T EV+T GK +G
Sbjct: 512 TFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG 571
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+LG G P+ V L ++ V +ACG AI
Sbjct: 572 QLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAI 607
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 152/345 (44%), Gaps = 33/345 (9%)
Query: 93 KQGEVFSWGEESGGRL--GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
++ E+FS G+ + G L GH ++ L + S +I+ +A G + G ++
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKL--ERASFFSYKSIQSIAGGNEVLVVLMKDGAVF 3188
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSI--SCGPWHTAVVTSAGQLFTFG 208
T G G G GN + L GI ++ + S G H ++ G ++++G
Sbjct: 3189 TCGLN--KSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWG 3246
Query: 209 DGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G LG G S S PR +ESL+ + A +H +AVV ++G
Sbjct: 3247 YNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVS-----------NNGD 3295
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
L T+G D G+LG + + P V L RVACG TVA+ G VY+ G
Sbjct: 3296 LLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNE 3355
Query: 328 YGQLG-NPQADGKLPNRVE----------GKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
YGQLG + + K+P V+ ++K+ ++ CG YH + +V TWG
Sbjct: 3356 YGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAV--QVYCGYYHTVTILECGKVVTWG 3413
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
+ G+LG G + ++ V +VK +CG T + ++
Sbjct: 3414 RNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVN 3458
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
S G+L++ G G LG GD + T V + +V G+ + LT+ G V T
Sbjct: 346 SFGELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTC 405
Query: 324 GSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEI--ACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ G+ D + + R L V+ I + G H+ +T Y+WG
Sbjct: 406 GLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465
Query: 381 GRLGHGDTDDR-NSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LGH + + P L+E++K+K++KS A + +A +
Sbjct: 466 GQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALV 504
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 162/358 (45%), Gaps = 48/358 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL +N++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P + AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
L G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHG--DTDDRNSPSLV------------EALKDKQVKSIACGT 412
T Y G GHG DT P + E L D QVK I GT
Sbjct: 299 -TLAYVHTTGQVISFGHGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGT 355
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 135/266 (50%), Gaps = 22/266 (8%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLID 123
LP+ +++ L+V ++CG H+ V +G VF+WG S G+LG G ++ PK I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT 123
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEG 182
L+ + I V+CG YH+ A++ +++WG ++ G LG G EV S P+RV LEG
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEG 180
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLKGLRTVR 239
I ++ ++ G H+ ++ G F +G + G L R + P + +LK L +
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY 240
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HTA +++ GK+FT+GD G+LG+ K P V ++
Sbjct: 241 ISCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDG 287
Query: 300 NFCRVACGHSLTVALT-TSGHVYTMG 324
++ CG T+A T+G V + G
Sbjct: 288 LVSQIDCGSYHTLAYVHTTGQVISFG 313
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + + A GE H+ + + + + GD + G LG
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRRAPRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE ++V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLAL------------SKDSQVFSWGKNSHGQLGLGKEVPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P +
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVL +V+T+G ++G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLNVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P + G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+ G++FTFGD + G LG+ P+ VE + GL + + C
Sbjct: 236 LGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G +HT A V ++G++ ++G G
Sbjct: 295 GSYHTLAYVH-----------TTGQVISFGHG 315
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG ++P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEVPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P + ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 168/382 (43%), Gaps = 36/382 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P SA VL ++ GG H+ ++ V++WG+ + G+LG G + P L
Sbjct: 61 PLYPASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLP 120
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ + V+ GE H+ A+T G ++ WG + G LG G P +V G +
Sbjct: 121 S--VAQVSAGESHSLALTDDGRVFAWG--LNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
++ G H+ +TS G++F +G + G LG+ SIP +V+ L T AA
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAG---- 232
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL-VEPNFCRVA 305
GN S + S G+++ WG G+LG G P VA L V+
Sbjct: 233 ---------GNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVS 283
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVA 364
G ++AL G VY G YGQLGN ++P +V G + V ++ G
Sbjct: 284 AGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGLAN---VTAVSAGGSDSL 340
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA------------LKDKQVKSIACGT 412
LTS VY WG ++G+LG G T +RN+P V + L D IA
Sbjct: 341 ALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIALSP 400
Query: 413 NFTAAICLHKWV--SGVDQSMC 432
FT+ + + +GV+Q +
Sbjct: 401 GFTSTVMDYTATVGAGVNQVLL 422
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 132 bits (331), Expect = 8e-28, Method: Composition-based stats.
Identities = 101/388 (26%), Positives = 162/388 (41%), Gaps = 80/388 (20%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ + CG H ++N G+VF WG G+LG G +S P+++ A G
Sbjct: 1635 IREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNS----PQILSA-----------GY 1679
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A+T S +LY WG G GL G G P +++ + + CG HT
Sbjct: 1680 EHSIAITKSNELYIWGSG----GLCGIGTLKQQNAPVKIDF-FNKSKILTAVCGGLHTVA 1734
Query: 198 VTSAGQLFTFG---DGTFGV---------LGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
VT + +++G G G+ G GD V P+ + L+GL+ + ACG
Sbjct: 1735 VTKDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEA 1794
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG------------DKEAKLVPTCV 293
H+ A+ + G ++ WG + G+LG G +K P +
Sbjct: 1795 HSIAMTK------------DGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEI 1842
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG--------------------- 332
L ++ CG + T+ T G +Y G GQLG
Sbjct: 1843 NGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKH 1902
Query: 333 NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK--TEVYTWGKGANGRLGHGDTDD 390
N +D LP RV + +IACG H ++ ++ WG NG+LG G+
Sbjct: 1903 NQTSDVILPTRVIC-FQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTM 1961
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ +P V++L Q++ IACG+ + A+
Sbjct: 1962 KLNPRPVQSLCSSQIQRIACGSMHSVAL 1989
Score = 113 bits (282), Expect = 4e-22, Method: Composition-based stats.
Identities = 97/325 (29%), Positives = 133/325 (40%), Gaps = 69/325 (21%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+++IWG G G+ G L + + VK+D + +AV CGG H V K
Sbjct: 1690 ELYIWGSGGLCGI--GTLKQQNA--PVKIDFFNKSKILTAV--------CGGLHTVAVTK 1737
Query: 94 QGEVFSWGEESGGRLG------------HGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
E +SWG GG+LG G + VL P+ I L + I VACGE H+
Sbjct: 1738 DWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSI 1797
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHG------------NEVSHWVPKRVNGPLEGIHVSSIS 189
A+T G +Y WG N+G LG G + + P+ +NG L+ +S I
Sbjct: 1798 AMTKDGTIYGWGQS--NYGQLGLGFSGDSFEPGLGMEKSKVYEPQEING-LKHEKISKII 1854
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLG--------------------HGDRKSVSIPREV 229
CG T T G L+ G G LG H V +P V
Sbjct: 1855 CGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVILPTRV 1914
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
+G+ + ACG H+ AV S L+ WG G+LG G+ KL
Sbjct: 1915 ICFQGIAIHQIACGESHSLAV----------SGDGMNMLWAWGMFKNGQLGLGEVTMKLN 1964
Query: 290 PTCVAALVEPNFCRVACGHSLTVAL 314
P V +L R+ACG +VAL
Sbjct: 1965 PRPVQSLCSSQIQRIACGSMHSVAL 1989
Score = 111 bits (278), Expect = 1e-21, Method: Composition-based stats.
Identities = 100/394 (25%), Positives = 159/394 (40%), Gaps = 93/394 (23%)
Query: 85 GRHAALVNKQ---GEVFSWGEESGGRLG------------HGVDSDVLHPKLIDALSNMN 129
G+ +NKQ G +FS G ++ G+LG H VL+P++I +L +
Sbjct: 1575 GKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEV 1634
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
I V CG HT + +SG ++ WG G LG G+ N P +S
Sbjct: 1635 IREVCCGNSHTMVINMSGQVFVWG--ANQTGQLGLGD----------NSP------QILS 1676
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
G H+ +T + +L+ +G G G+ G G K + P +++ + + A CG HT A
Sbjct: 1677 AGYEHSIAITKSNELYIWGSG--GLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVA 1734
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG------------HGDKEAKLVPTCVAALV 297
V + + ++WG + G+LG GD+ L P + L
Sbjct: 1735 VTK------------DWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLE 1782
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG--------NP-----QADGKLPNRV 344
+VACG + ++A+T G +Y G YGQLG P ++ P +
Sbjct: 1783 GLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEI 1842
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG-------------------- 384
G L + +I CG+ T K ++Y G G+LG
Sbjct: 1843 NG-LKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGK 1901
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H T D P+ V + + IACG + + A+
Sbjct: 1902 HNQTSDVILPTRVICFQGIAIHQIACGESHSLAV 1935
Score = 103 bits (257), Expect = 3e-19, Method: Composition-based stats.
Identities = 101/390 (25%), Positives = 152/390 (38%), Gaps = 89/390 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF+WG G LG G N Q ++ G H+ +
Sbjct: 1652 GQVFVWG-ANQTGQLGLGDN------------------------SPQILSAGYEHSIAIT 1686
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K E++ WG SGG G G P ID + I CG HT AVT + Y+W
Sbjct: 1687 KSNELYIWG--SGGLCGIGTLKQQNAPVKIDFFNKSKILTAVCGGLHTVAVTKDWEAYSW 1744
Query: 153 G--DGTYNFGL---------LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
G +G GL G G+E P+R+ LEG+ ++ ++CG H+ +T
Sbjct: 1745 GLTEGG-QLGLPQSTIVKLCQGQGDEPQVLTPQRIP-KLEGLQIAQVACGEAHSIAMTKD 1802
Query: 202 GQLFTFGDGTFGVLGHG------------DRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
G ++ +G +G LG G ++ V P+E+ LK + + CG T
Sbjct: 1803 GTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEINGLKHEKISKIICGATFTLF 1862
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--------------------HGDKEAKLV 289
+ G L+ G D G+LG H ++
Sbjct: 1863 QTD------------KGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGKHNQTSDVIL 1910
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGH--VYTMGSPVYGQLGNPQADGKLPNRVEGK 347
PT V ++ACG S ++A++ G ++ G GQLG + KL R
Sbjct: 1911 PTRVICFQGIAIHQIACGESHSLAVSGDGMNMLWAWGMFKNGQLGLGEVTMKLNPRPVQS 1970
Query: 348 LSKSFVEEIACGSYHVAVL---TSKTEVYT 374
L S ++ IACGS H L T++ +Y+
Sbjct: 1971 LCSSQIQRIACGSMHSVALIGDTNQISIYS 2000
Score = 68.9 bits (167), Expect = 8e-09, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 101/253 (39%), Gaps = 53/253 (20%)
Query: 202 GQLFTFG---DGTFG--VLGHGDRKS-------VSIPREVESLKGLRTVRAACGVWHTAA 249
G LF+ G +G G VL D+ S V PR + SLK CG HT
Sbjct: 1588 GILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHT-- 1645
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
MV N S G++F WG G+LG GD +++ + G+
Sbjct: 1646 ----MVINMS------GQVFVWGANQTGQLGLGDNSPQIL---------------SAGYE 1680
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
++A+T S +Y GS +G + P +++ +KS + CG H +T
Sbjct: 1681 HSIAITKSNELYIWGSGGLCGIGTLKQQNA-PVKID-FFNKSKILTAVCGGLHTVAVTKD 1738
Query: 370 TEVYTWGKGANGRLG------------HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
E Y+WG G+LG GD +P + L+ Q+ +ACG + A
Sbjct: 1739 WEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKLEGLQIAQVACGEAHSIA 1798
Query: 418 ICLHKWVSGVDQS 430
+ + G QS
Sbjct: 1799 MTKDGTIYGWGQS 1811
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 198/425 (46%), Gaps = 44/425 (10%)
Query: 9 FRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP 67
+VS +A+++ + G GH + G ++ WG+ NR G G+ + ++
Sbjct: 455 MQVSGLAAITALATGDGHSVAVGSDGGIWAWGD-----------NRRGQ-LGIGITATRE 502
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
+++ + + +A G H+ + G V++WG + G+LG G D + L++
Sbjct: 503 IPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRATAAQVPGLTD 562
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
I +A G +H+ A+ G ++ WG + +FG LG G S P +V+G L + +
Sbjct: 563 --ITALAAGNHHSLALRNDGTVWVWG--SNDFGQLGDGTVTSRKTPVQVSG-LSAMR--A 615
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+ GP H+ V G ++ +G+ FG LG G S ++P +V L G+ V A GV+H+
Sbjct: 616 VEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTGVTAV--AVGVYHS 673
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A+ + G L+ WG + G+LG+G + P V L G
Sbjct: 674 LAL------------RNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNG 721
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVL 366
HSL AL T G V+ G+ +GQLG+ + P +V G + V + G+++ L
Sbjct: 722 HSL--ALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLTN---VIALNAGAFYTVAL 776
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK--WV 424
S+ V+ WG + G+LG G + +P V L D V ++A G A+ + W
Sbjct: 777 RSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGLTD--VTALAAGNAHALALRTDRTVWA 834
Query: 425 SGVDQ 429
G +Q
Sbjct: 835 WGGNQ 839
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 27/321 (8%)
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
+ D+ +A G H+ + G V+ WG G+LG G + P + LS M V
Sbjct: 560 LTDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLSAM--RAVE 617
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G H+ AV L+G ++ WG+ +FG LG G S +P +V+G L G V++++ G +H
Sbjct: 618 AGPAHSVAVHLNGTVWVWGN--NDFGQLGDGTVTSRAMPVQVSG-LTG--VTAVAVGVYH 672
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + + G L+ +G G LG+G S P +V L G+ + A G H+ A+
Sbjct: 673 SLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPAQVPGLTGVIALAAGNG--HSLAL---- 726
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ G ++ WG G+LG G + PT V L N + G TVAL
Sbjct: 727 --------RTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLT--NVIALNAGAFYTVAL 776
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+ V+ GS GQLG+ K P +V G + V +A G+ H L + V+
Sbjct: 777 RSERSVWEWGSKSAGQLGDGTVTQKTTPVQVSGL---TDVTALAAGNAHALALRTDRTVW 833
Query: 374 TWGKGANGRLGHGDTDDRNSP 394
WG G++G G +P
Sbjct: 834 AWGGNQRGQIGDGTASIMPAP 854
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 155/360 (43%), Gaps = 54/360 (15%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H + + G V++WG G+LG+G +D P + L+ ++ VA E H+
Sbjct: 149 VSAAGDHTLALRRDGTVWAWGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHS 206
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+ G ++ WGD Y G LG G + P +V G L G V++++ G T V S
Sbjct: 207 LALRSDGTVWAWGDNGY--GQLGDGTKAQRTTPVQVLG-LAG--VTALAAGGNGTTVAIS 261
Query: 201 A--------GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
A G ++ +GD + G LG G + P +V GL +V A A G +H+ A+
Sbjct: 262 AHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQV---LGLTSVTALAAGAFHSLALR 318
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG---- 307
+ G ++ WG+ G+LG G A+ P V L + VA G
Sbjct: 319 D------------DGTVWAWGNNSSGQLGDGTTTARPTPVQVPGLT--SVIAVAAGGGDD 364
Query: 308 -------HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV--EEIAC 358
HSL AL + G V+ G + Q G DG R +
Sbjct: 365 SLGMRGDHSL--ALKSDGTVWAWGYNLSRQFG----DGMPATRTTPVQVSELTGGTALVA 418
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G H VL S V+ WG ++G+LG G T R P V L + ++A G + A+
Sbjct: 419 GDLHAVVLKSDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGL--AAITALATGDGHSVAV 476
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 172/401 (42%), Gaps = 52/401 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR------ 86
G V+ WG+ G G LG G K + P ++ + V +A GG
Sbjct: 213 GTVWAWGD-NGYGQLGDG---------TKAQRTTP--VQVLGLAGVTALAAGGNGTTVAI 260
Query: 87 --HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
H+ + G V++WG+ S G+LG G ++ P + L ++ +A G +H+ A+
Sbjct: 261 SAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATP--VQVLGLTSVTALAAGAFHSLALR 318
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS------SISCGPWHTAVV 198
G ++ WG+ + G LG G + P +V G I V+ S+ H+ +
Sbjct: 319 DDGTVWAWGNNSS--GQLGDGTTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLAL 376
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G ++ +G G G + + P +V L G + A G H A V++
Sbjct: 377 KSDGTVWAWGYNLSRQFGDGMPATRTTPVQVSELTGGTALVA--GDLH-AVVLK------ 427
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
S G ++ WGD G+LG G + P V+ L GHS VA+ + G
Sbjct: 428 -----SDGTVWAWGDNSSGQLGEGVTPVRAKPMQVSGLAAITALATGDGHS--VAVGSDG 480
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
++ G GQLG A ++P + G S + +A G H L V+TWG
Sbjct: 481 GIWAWGDNRRGQLGIGITATREIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTWGS 537
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
A G+LG G DR + + V L D + ++A G + + A+
Sbjct: 538 NAYGQLGDGTAIDRATAAQVPGLTD--ITALAAGNHHSLAL 576
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 45/252 (17%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ + G H+ V+ G V+ WG G+LG G + P + L+ + VA G
Sbjct: 613 MRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGLTG--VTAVAVGV 670
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YH+ A+ G L+ WG N G LG+G P +V G L G V +++ G H+
Sbjct: 671 YHSLALRNDGTLWAWG--YNNVGQLGNGTSGIQSTPAQVPG-LTG--VIALAAGNGHSLA 725
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC----------GVWHT 247
+ + G ++ +G +FG LG G S P +V L + + A VW
Sbjct: 726 LRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPGLTNVIALNAGAFYTVALRSERSVWEW 785
Query: 248 AA-------------------------VVEVMVGNSSSSNCSSGK-LFTWGDGDKGRLGH 281
+ V + GN+ + + + ++ WG +G++
Sbjct: 786 GSKSAGQLGDGTVTQKTTPVQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQI-- 843
Query: 282 GDKEAKLVPTCV 293
GD A ++P V
Sbjct: 844 GDGTASIMPAPV 855
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 162/358 (45%), Gaps = 48/358 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL +N++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P + AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
L G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHG--DTDDRNSPSLV------------EALKDKQVKSIACGT 412
T Y G GHG DT P + E L D QVK I GT
Sbjct: 299 -TLAYVHTTGQVISFGHGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGT 355
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 161/335 (48%), Gaps = 31/335 (9%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLID 123
LP+ +++ L+V ++CG H+ V +G VF+WG S G+LG G ++ PK I
Sbjct: 64 ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIT 123
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEG 182
L+ + I V+CG YH+ A++ +++WG ++ G LG G EV S P+RV LEG
Sbjct: 124 TLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEG 180
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLKGLRTVR 239
I ++ ++ G H+ ++ G F +G + G L R + P + +LK L +
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIY 240
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HTA +++ GK+FT+GD G+LG+ K P V ++
Sbjct: 241 ISCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVER-IDG 287
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACG 359
++ CG T+A +V+T G + G+ +D P E L+ +F +I C
Sbjct: 288 LVSQIDCGSYHTLA-----YVHTTGQVI--SFGHGPSDTSKPTHPEA-LTGNF--DIRCL 337
Query: 360 SYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
++ + + G AN H DT ++P
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAP 372
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + + A GE H+ + + + + GD + G LG
Sbjct: 6 GTDSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRRAPRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE ++V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLAL------------SKDSQVFSWGKNSHGQLGLGKEVPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P +
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVL +V+T+G ++G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLNVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P + G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSI-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+ G++FTFGD + G LG+ P+ VE + GL + + C
Sbjct: 236 LGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
G +HT A V ++G++ ++G G
Sbjct: 295 GSYHTLAYVH-----------TTGQVISFGHG 315
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG ++P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEVPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P + ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 169/360 (46%), Gaps = 37/360 (10%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG G DG LG G + L +++ +V+++ G R++ +
Sbjct: 7 VIAWGSGE-DGQLG---------LGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++F+WG G LGH ++ P L+ +L+N+ I A G +H AV G Y WG
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 154 DGTY-NFGLLGHGNEVSHWVPKRVNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y G +E V + + P + + V ++ G H+ V+T G ++T+G
Sbjct: 117 GNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ 176
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
GD K +S+P V+ L+ +R + A G +H A+ E G L+
Sbjct: 177 ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALKE------------DGTLW 218
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG+ + G+LG GD + + P V L + +A G + ALT G VY G +G
Sbjct: 219 AWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHG 278
Query: 330 QLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+LG N ++ LP +V L+ + +++CG H LT ++++G+G +GRLG+G
Sbjct: 279 RLGFGDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 150/332 (45%), Gaps = 50/332 (15%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG---------EESGGRLGHGVDS 114
S P ++S + + A GG H V+ QG ++WG E S G V
Sbjct: 79 ESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D++ PK + + VA G H+ +T G ++TWG + G + ++S VP
Sbjct: 139 DIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQ-PWPPGDI---KQIS--VPV 190
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
RV G LE + + I+ G +H + G L+ +G+ +G LG GD + S P V+ L
Sbjct: 191 RVQG-LENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDD 247
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
L V A G WH+ A+ + G+++ WG G+ GRLG GD K +K++P
Sbjct: 248 LTLVDIAAGGWHSTALT------------NEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----------------PQA 336
V L + +V+CG + +VALT G +++ G +G+LG P
Sbjct: 296 VNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPP 355
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+G+ + E K + +ACG H +
Sbjct: 356 EGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 138/334 (41%), Gaps = 35/334 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V +WG G+LG G D + ++DAL N+ V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--W 64
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LGH E + L + + + G WH V G+ + +G +G G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 217 HGD---------RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
R+ + IP+ +R V A G S G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAG--------------GTHSVVLTREGY 170
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG GD + VP V L V H+L AL G ++ G+
Sbjct: 171 VWTWGQ----PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNL--ALKEDGTLWAWGNNE 224
Query: 328 YGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YGQLG + P V+G + V+ IA G +H LT++ EVY WG+G +GRLG G
Sbjct: 225 YGQLGTGDTQPRSYPIPVQGLDDLTLVD-IAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 387 DTDDRNS--PSLVEALKDKQVKSIACGTNFTAAI 418
D D + P V L + + ++CG + A+
Sbjct: 284 DNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 41/274 (14%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
V+ D +PK A L V+ +A GG H+ ++ ++G V++WG+ G + P
Sbjct: 136 VRRDIVIPK--RCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQP----WPPGDIKQISVP 189
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ L N + L+A G +H A+ G L+ WG+ Y G LG G+ P V G
Sbjct: 190 VRVQGLEN--VRLIAVGAFHNLALKEDGTLWAWGNNEY--GQLGTGDTQPRSYPIPVQG- 244
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSIPREVESLKGLRT 237
L+ + + I+ G WH+ +T+ G+++ +G G G LG GD + S +P++V L G
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
++ +CG H+ A+ G++F++G GD GRLG+G K P + +
Sbjct: 305 IQVSCGGTHSVALTR------------DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHI 352
Query: 298 EPNFCR----------------VACGHSLTVALT 315
P R VACG T+A+
Sbjct: 353 PPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIV 386
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
S+ + WG G+ G+LG G E K + + V AL N V G ++A+ G ++T
Sbjct: 2 ASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFT 61
Query: 323 MGSPVYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G G LG+P P+ V+ L+ + + A G +H + + Y WG
Sbjct: 62 WGWNQRGTLGHPPETKTESTPSLVK-SLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 381 GRLGHGDTDDR 391
G+ G + D
Sbjct: 121 GQCGEEPSKDE 131
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ S T V WG G +G+LG G +++ S+V+AL+ V+S+ G+ + AIC
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAIC 54
>gi|14334416|gb|AAK59406.1| unknown protein [Arabidopsis thaliana]
Length = 488
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 153/321 (47%), Gaps = 32/321 (9%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVA 134
V ++ H+A V + G+V + G+ S GH +D+ + PKL++AL + VA
Sbjct: 164 QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVA 222
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN-----GPLEGIHVSSIS 189
G + T ++ G YT G T+ G LGHG+ + VPK V GP V I+
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGP-----VVQIA 275
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHT 247
GP + +T G +++FG G+ LGHG+++ PR +++ K G+ +R + G H
Sbjct: 276 AGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHA 335
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A+ S+G+++TWG G G LGHGD+ K+ P + L +V
Sbjct: 336 VALD------------SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCAR 383
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVA 364
T L G +Y G +G LG P +D L RV L V +++ G YH
Sbjct: 384 KRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTI 443
Query: 365 VLTSKTEVYTWGKGANGRLGH 385
V+T + ++ +G +LGH
Sbjct: 444 VVTQRGRIFGFGDNERAQLGH 464
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 129/278 (46%), Gaps = 27/278 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV---PKRVNGPLEGIHVSSIS 189
+A G+YHT + S + G G+L HG+E + V P P + V+ +S
Sbjct: 116 IATGKYHTLLINNSK---VYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQ---VAQVS 169
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTA 248
H+A V +GQ+ T GD + GH D + + P+ VE+LKG + A G+ T
Sbjct: 170 ATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTV 229
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVAC 306
+ G +T G G+LGHGD + VP V L + P ++A
Sbjct: 230 FLSR------------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP-VVQIAA 276
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS--FVEEIACGSYHVA 364
G S +ALT G VY+ GS LG+ + +L RV + + ++ G H
Sbjct: 277 GPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV 336
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
L S VYTWGKG G LGHGD +D+ +P ++ L +
Sbjct: 337 ALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAVVL-DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G +D +PK +E + V IA G + + + G V+S+G S LGHG D L
Sbjct: 251 GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQDGSVYSFGSGSNFCLGHGEQQDEL 310
Query: 118 HPKLIDALSNMNIEL--VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P++I A I + V+ G+ H A+ +G +YTWG G G LGHG+E P+
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC--GALGHGDENDKITPQ- 367
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
V L + T V+ G L+ FG FG LG DR V PR +E L
Sbjct: 368 VLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
K R + + G++HT V + G++F +GD ++ +LGH L PT
Sbjct: 428 KPHRVSQVSTGLYHTIVVTQ------------RGRIFGFGDNERAQLGHDSLRGCLEPT 474
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS-DVLHPKLIDALSNMNIELVACGEY 138
IA G H L+N +V+S G G L HG ++ + I+ + V+ +
Sbjct: 115 QIATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H+ V SG + T GD + + GH + ++ L+G ++ G T +
Sbjct: 174 HSAFVLQSGQVLTCGDNSSH--CCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFL 231
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAVVEVMVGN 257
+ G +T G T G LGHGD +P+ VE LK + V+ A G + A+ +
Sbjct: 232 SREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLALTQ----- 286
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGHSLTVALT 315
G ++++G G LGHG+++ +L P + A + RV+ G VAL
Sbjct: 287 -------DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD 339
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
++G VYT G G LG+ + K+ +V L+ ++ VL +Y +
Sbjct: 340 SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGF 399
Query: 376 GKGANGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G LG D +D P ++E LK +V ++ G T +
Sbjct: 400 GWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 19/279 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK +E+ + +A G ++++G ++ G + G+LGHG D PK+++ L
Sbjct: 207 PKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLK 266
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ + +A G + A+T G +Y++G G+ NF LGHG + P+ + +GIH
Sbjct: 267 TIGPVVQIAAGPSYVLALTQDGSVYSFGSGS-NF-CLGHGEQQDELQPRVIQAFKRKGIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ +S G H + S G+++T+G G G LGHGD P+ + +L V+
Sbjct: 325 ILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 301
T +VE G L+ +G G LG D+ + L P + L
Sbjct: 385 RKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
+V+ G T+ +T G ++ G QLG+ G L
Sbjct: 433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCL 471
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+ +++ + + ++ G HA ++ G V++WG+ G LGHG ++D
Sbjct: 304 GEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDK 363
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 174
+ P+++ L+N + + C V + G L +G G FG LG + VS V +
Sbjct: 364 ITPQVLVNLNNC-LAVQVCARKRKTFVLVEGGLL-YGFGWMGFGSLGFPDRGVSDKVLRP 421
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
RV L+ VS +S G +HT VVT G++F FGD LGH + P E+
Sbjct: 422 RVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/312 (33%), Positives = 146/312 (46%), Gaps = 33/312 (10%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
WG GRLG G P + ++ +ACG HT +T SG +Y G NF
Sbjct: 85 WGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYA--TGLNNF 142
Query: 160 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG +E P V P E +H IS G H+ VVT+ G+L+ +G + G LG G
Sbjct: 143 GQLGISDEKRFSTEPVEVRIPKEAMH---ISAGYNHSCVVTADGELYMWGVNSNGQLGLG 199
Query: 219 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
+ K+V +P +V+SL G+ RAA G H+ AV + G++F+WGDG
Sbjct: 200 KKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVAD------------GGEVFSWGDGRS 247
Query: 277 GRLGHGDKEAKL---------VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
GRLGHG + L P + L VA G + + +G VY G
Sbjct: 248 GRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERA 307
Query: 328 YGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
++ +A+ P+ + L EE+ACG YH VLT ++Y+WG NG LG+G
Sbjct: 308 TNRVSFGEANKATTPSLISTLLD---CEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNG 364
Query: 387 DTDDRNSPSLVE 398
T + P VE
Sbjct: 365 STSVSHLPERVE 376
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/288 (31%), Positives = 139/288 (48%), Gaps = 30/288 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ IACGG H + + G V++ G + G+LG D + ++ ++ G
Sbjct: 115 LKGIACGGAHTLFLTESGRVYATGLNNFGQLGIS-DEKRFSTEPVEVRIPKEAMHISAGY 173
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHT 195
H+C VT G+LY W G + G LG G + + V P +V+ L+GI + + G H+
Sbjct: 174 NHSCVVTADGELYMW--GVNSNGQLGLGKKSAKAVHLPTKVD-SLDGIVIKRAALGSDHS 230
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDR-------KSVS--IPREVESLKGLRTVRAACGVWH 246
V G++F++GDG G LGHG KS S PR ++ L+G++ A G+ H
Sbjct: 231 IAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLH 290
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+A V E +G ++ +G+ R+ G+ P+ ++ L++ VAC
Sbjct: 291 SACVDE------------NGAVYIFGERATNRVSFGEANKATTPSLISTLLDCE--EVAC 336
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFV 353
G T LT G +Y+ GS G LGN LP RVEG SKS V
Sbjct: 337 GGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPV 384
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 30/260 (11%)
Query: 46 VLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEES 104
V GLN G G+ + + +E + + +I+ G H+ +V GE++ WG S
Sbjct: 134 VYATGLNNFGQ-LGISDEKRFSTEPVEVRIPKEAMHISAGYNHSCVVTADGELYMWGVNS 192
Query: 105 GGRLGHGVDS--DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLL 162
G+LG G S V P +D+L + I+ A G H+ AV G++++WGDG G L
Sbjct: 193 NGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRS--GRL 250
Query: 163 GHGNE---------VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
GHG+E S P+ + LEGI V ++ G H+A V G ++ FG+
Sbjct: 251 GHGHESTFLGFLKSTSEHTPRLIK-ELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 309
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+ G+ + P + +L L ACG +HT + + G L++WG
Sbjct: 310 RVSFGEANKATTPSLISTL--LDCEEVACGGYHTCVLTK------------GGDLYSWGS 355
Query: 274 GDKGRLGHGDKEAKLVPTCV 293
+ G LG+G +P V
Sbjct: 356 NENGCLGNGSTSVSHLPERV 375
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G++++WG + +G LG G + LP ++S + ++ A G H+
Sbjct: 181 ADGELYMWGVNS-NGQLGLGKKSAKAV-------HLPTKVDSLDGIVIKRAALGSDHSIA 232
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDALSNMNIELVACGEYHTC 141
V GEVFSWG+ GRLGHG +S L P+LI L + ++ VA G H+
Sbjct: 233 VADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSA 292
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
V +G +Y +G+ N G N+ + P ++ L+ ++CG +HT V+T
Sbjct: 293 CVDENGAVYIFGERATNRVSFGEANKAT--TPSLISTLLD---CEEVACGGYHTCVLTKG 347
Query: 202 GQLFTFGDGTFGVLGHGDRKSVSIPREVE 230
G L+++G G LG+G +P VE
Sbjct: 348 GDLYSWGSNENGCLGNGSTSVSHLPERVE 376
Score = 45.8 bits (107), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 12/94 (12%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
D G V+I+GE NRV FG ++ P + + +LD + +ACGG H
Sbjct: 295 DENGAVYIFGERA--------TNRV--SFGEANKATTPSLI--STLLDCEEVACGGYHTC 342
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
++ K G+++SWG G LG+G S P+ ++
Sbjct: 343 VLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVE 376
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 172/348 (49%), Gaps = 28/348 (8%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL +N++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGELKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKT 370
LT G V+T G GQLG +P + + P VE + V ++ CGSYH +A + +
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTG 307
Query: 371 EVYTWGKGAN--GRLGHGD--TDDRNSPSLV--EALKDKQVKSIACGT 412
+V ++G G + G+ H + T++ + L+ E L QVK I GT
Sbjct: 308 QVVSFGHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVKHIFAGT 355
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L+V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAPRG-----ELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+ + I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGAEHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V +++ +V CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLV-EIIDGLVSQVDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTGKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C ++ + + G AN H DT +P
Sbjct: 325 PEA-LTENF--DISCLISAEDLVGVQVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + + A GE H+ + + + + GD + G LG
Sbjct: 6 GADSRELQRRRTEGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAPRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE ++V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLAL------------SKDSQVFSWGKNSHGQLGLGKEFPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG+ H AVLT +V+T+G +G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEII-DGL 288
Query: 405 VKSIACGTNFTAA 417
V + CG+ T A
Sbjct: 289 VSQVDCGSYHTLA 301
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 31/283 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G +K S
Sbjct: 71 ALETLNVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------ELKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGLVS-QVDC 294
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGD 283
G +HT A V ++G++ ++G G D G+ H +
Sbjct: 295 GSYHTLAYVH-----------TTGQVVSFGHGPSDTGKPTHPE 326
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
Length = 408
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 187/411 (45%), Gaps = 65/411 (15%)
Query: 38 WGEGTGDGVLG-GGLNRVGSCFGVKMDSSLPKAL--ESAVVLDVQNIACGGRHAALVNKQ 94
WG GT DG LG GG + D LP+ L + V +A GG HA +
Sbjct: 30 WGAGT-DGQLGNGGFD----------DHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSD 78
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEVF+WG + G+LGHG ++ HPKL+ L N + V+ G H+ T SG L+ GD
Sbjct: 79 GEVFTWGRGTHGQLGHGNLDNMPHPKLVKFLENHTVTCVSAGWNHSGFATDSGQLFMCGD 138
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G+ FG LG G+ +S P V H+ ++ G H+ V+ ++ FG G
Sbjct: 139 GS--FGQLGTGDNLSRNFPFEV-AYFNATHIEKLAFGMRHSLVLLKDNSVYGFGSARRGQ 195
Query: 215 LGHGD---RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
+G +KS ++PR ++ + V H+AA+ E SG L+ W
Sbjct: 196 VGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDE------------SGHLYVW 243
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS------ 325
G G+ D+ ++++P+ + +VA G + L ++G +YT+G
Sbjct: 244 GRALIGQH-DDDQPSEILPSL-------SVSQVALGWHHALVL-SAGELYTLGVYRHQKC 294
Query: 326 --PVYGQLGNPQADGKLPNRVEGK------------LSKSFVEEIACGSYHVAVLTSKTE 371
P G + Q+D + + L V +IA G+ H A++T K
Sbjct: 295 DLPGLGNVLGQQSDTRATSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDKGT 354
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS----IACGTNFTAAI 418
V+TWG G +G+LG GDT D +P V + Q S + CG+ FT A+
Sbjct: 355 VFTWGWGEHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 405
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 23/281 (8%)
Query: 98 FSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+SWG + G+LG+G D + P L+ + VA G H A+T G+++TWG G
Sbjct: 28 WSWGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRG 87
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
T+ G LGHGN + PK V LE V+ +S G H+ T +GQLF GDG+FG L
Sbjct: 88 TH--GQLGHGNLDNMPHPKLVK-FLENHTVTCVSAGWNHSGFATDSGQLFMCGDGSFGQL 144
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G GD S + P EV + A G+ H+ V++ ++S S + G
Sbjct: 145 GTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSL----VLLKDNSVYGFGSAR-----RGQ 195
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
G+ +++ VP + + + AL SGH+Y G + GQ + Q
Sbjct: 196 VGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGRALIGQHDDDQ 255
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
LP+ LS V ++A G +H VL S E+YT G
Sbjct: 256 PSEILPS-----LS---VSQVALGWHHALVL-SAGELYTLG 287
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 119/267 (44%), Gaps = 28/267 (10%)
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE-GIHVSSISCGPWHTAVVTSAGQLFTFG 208
++WG GT G LG+G H +P+ + P VS ++ G H +TS G++FT+G
Sbjct: 28 WSWGAGTD--GQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWG 85
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
GT G LGHG+ ++ P+ V+ L+ TV W N S SG+L
Sbjct: 86 RGTHGQLGHGNLDNMPHPKLVKFLEN-HTVTCVSAGW-----------NHSGFATDSGQL 133
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
F GDG G+LG GD ++ P VA + ++A G ++ L VY GS
Sbjct: 134 FMCGDGSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKDNSVYGFGSARR 193
Query: 329 GQLGN----PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
GQ+G Q +P ++G + V A G H A L +Y WG+ G+
Sbjct: 194 GQVGKCASRIQKSYNVPRLIDGFPNCKIVNIYANGD-HSAALDESGHLYVWGRALIGQ-- 250
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACG 411
D + PS E L V +A G
Sbjct: 251 ----HDDDQPS--EILPSLSVSQVALG 271
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 18/160 (11%)
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-----VACGHSLTVALTTSGHVYTM 323
++WG G G+LG+G + +P L+ P CR VA G + +ALT+ G V+T
Sbjct: 28 WSWGAGTDGQLGNGGFDDHHLPQ---PLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTW 84
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE-----IACGSYHVAVLTSKTEVYTWGKG 378
G +GQLG+ G L N KL K F+E ++ G H T +++ G G
Sbjct: 85 GRGTHGQLGH----GNLDNMPHPKLVK-FLENHTVTCVSAGWNHSGFATDSGQLFMCGDG 139
Query: 379 ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ G+LG GD RN P V ++ +A G + +
Sbjct: 140 SFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVL 179
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 134/354 (37%), Gaps = 95/354 (26%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRV------------------------------GSCF---- 58
G+VF WG GT + G L+ + G F
Sbjct: 79 GEVFTWGRGTHGQLGHGNLDNMPHPKLVKFLENHTVTCVSAGWNHSGFATDSGQLFMCGD 138
Query: 59 --------GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGH 110
G + + P + ++ +A G RH+ ++ K V+ +G G++G
Sbjct: 139 GSFGQLGTGDNLSRNFPFEVAYFNATHIEKLAFGMRHSLVLLKDNSVYGFGSARRGQVGK 198
Query: 111 ---GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
+ P+LID N I + H+ A+ SG LY WG L+G ++
Sbjct: 199 CASRIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWGR-----ALIGQHDD 253
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---------DGTFGVLG-H 217
P + L + VS ++ G WH A+V SAG+L+T G G VLG
Sbjct: 254 DQ---PSEI---LPSLSVSQVALG-WHHALVLSAGELYTLGVYRHQKCDLPGLGNVLGQQ 306
Query: 218 GDRKSV----------SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
D ++ S+ V L G + + A G H+A V + G
Sbjct: 307 SDTRATSSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTD------------KGT 354
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCV-----AALVEPNFCRVACGHSLTVALTT 316
+FTWG G+ G+LG GD + P V + +F V CG TVA+ +
Sbjct: 355 VFTWGWGEHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFA-VYCGSGFTVAVKS 407
>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
Length = 1697
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 166/341 (48%), Gaps = 30/341 (8%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H+A V +QG +F +G+ + G+LG + V P + L + VACG H
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G++ G + LGH N+ + +R+ + + +S G +A +T
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+LF +GD + G LG G+ +P+E+ + + V +CG H+A V +
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWV--SCGYRHSALVTD------- 206
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALTTS 317
SG ++T+G+ GRLG + P V +L + +VACG T+AL T
Sbjct: 207 -----SGDVYTFGESADGRLGLSAHQLANHSYPQRVESLR--SVLQVACGGKHTLAL-TE 258
Query: 318 GHVYTMGSPVYGQLGNPQ----ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
+Y G +GQLG AD + G K V + CG H A++T +Y
Sbjct: 259 DELYCFGGGEFGQLGLGMLVFVADSPV---AVGHFRKDRVTHVTCGEQHSALITDSGLLY 315
Query: 374 TWGKGANGRLGHGDTDDRN--SPSLVEALKDKQVKSIACGT 412
T+G G +G+LGHGD + N +P++ + + V ++ACG+
Sbjct: 316 TFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGS 356
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 150/302 (49%), Gaps = 40/302 (13%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACG 136
Q++ACG H + QGE+ + G S G+LG G +D + + + + I+L++ G
Sbjct: 88 AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
++ + A+T G L+ WGD + G LG GN+ +P+ +N G + +SCG H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNSA--GQLGFGNDSHALLPQELNM---GQSIHWVSCGYRHSA 202
Query: 197 VVTSAGQLFTFG---DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+VT +G ++TFG DG G+ H + S P+ VESL+ + ++ ACG HT A+ E
Sbjct: 203 LVTDSGDVYTFGESADGRLGLSAH-QLANHSYPQRVESLRSV--LQVACGGKHTLALTE- 258
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-----PTCVAALVEPNFCRVACGH 308
+L+ +G G+ G+LG G LV P V + V CG
Sbjct: 259 ------------DELYCFGGGEFGQLGLG----MLVFVADSPVAVGHFRKDRVTHVTCGE 302
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE----EIACGSYHVA 364
+ +T SG +YT G +G+LG+ D N+ + + F E +ACGS H+
Sbjct: 303 QHSALITDSGLLYTFGDGRHGKLGH--GDENFTNQFTPTVCQRFFEYSVMTVACGSSHML 360
Query: 365 VL 366
V
Sbjct: 361 VF 362
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
I+CG H A +T + ++ +G G+LG P V+ LK ++ +S+ACGT+ T
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
>gi|162453643|ref|YP_001616010.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161164225|emb|CAN95530.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1134
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 179/397 (45%), Gaps = 46/397 (11%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G V WGEG R+G+ G D++ P + + + D ++ GG H
Sbjct: 536 ATGAVVCWGEGQ--------WGRLGN--GSTADATTPVTVSN--LTDAVDVDAGGGHTCA 583
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ G V WG + G+LG+G+ D P + L N I + A G H+CA+ +G
Sbjct: 584 LRATGAVVCWGRGTNGQLGNGISGDQSAPVTVFGL-NDAISISA-GWGHSCALRATGGAV 641
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW--------HTAVVTSAG 202
WG G N G LG+G+ S + P V + + + + + + HT + G
Sbjct: 642 CWGRG--NHGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNG 699
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+ +G G G LG+G S +V L R V A G+ HT A+
Sbjct: 700 TVRCWGYGVDGQLGYGAFSSSEAGVDVLDLSDARAVAA--GMSHTCAMR----------- 746
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
S+G++ WG D G++G+G L+P V L + +A G++ T AL +G V
Sbjct: 747 -STGEIRCWGAADSGQIGNGSAATALLPAPVVNL--GDAVEIAAGYAHTCALRRNGQVEC 803
Query: 323 MGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G +G+LGN AD P V L+ + I G+ H L +V WG+GA G
Sbjct: 804 WGEGEFGRLGNGSGADRTTPTPV---LNLTDAAHITAGTAHTCALLQSGQVRCWGEGAYG 860
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
RLG+G DDRN+P V L D +I+ G T A+
Sbjct: 861 RLGNGSQDDRNTPVAVSGLTD--AVAISAGDAHTCAV 895
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 166/371 (44%), Gaps = 37/371 (9%)
Query: 57 CFGVKMDSSLP----KALESAV-VLDVQN---IACGGRHAALVNKQGEVFSWGEESGGRL 108
C+G +D L + E+ V VLD+ + +A G H + GE+ WG G++
Sbjct: 703 CWGYGVDGQLGYGAFSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQI 762
Query: 109 GHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
G+G + L P + L + +E+ A G HTCA+ +G + WG+G FG LG+G+
Sbjct: 763 GNGSAATALLPAPVVNLGDA-VEIAA-GYAHTCALRRNGQVECWGEG--EFGRLGNGSGA 818
Query: 169 SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
P V + H+++ G HT + +GQ+ +G+G +G LG+G + + P
Sbjct: 819 DRTTPTPVLNLTDAAHITA---GTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDRNTPVA 875
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 288
V L + A G HT AV + +G++ WG GRLG+G +
Sbjct: 876 VSGLTDAVAISA--GDAHTCAVRQ------------NGQVSCWGYAALGRLGNGSTTDQT 921
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGK 347
P V + + H T AL SG V G G+LGN L P V G
Sbjct: 922 APVTVLDIADAVAVAAGGEH--TCALRASGAVSCWGGGGSGRLGNASTANSLRPVAVTG- 978
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
LS + +A G H + S V WG G +GRLG+G T P V L D
Sbjct: 979 LSDAI--GLAAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATIPIPVSGLGD--ALQ 1034
Query: 408 IACGTNFTAAI 418
++ GT+ T AI
Sbjct: 1035 VSAGTSHTCAI 1045
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 148/353 (41%), Gaps = 38/353 (10%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
D + G HA + G V WG + GRLG+G + P + LS+ + L A G
Sbjct: 470 DAVAVGVGRFHACALRATGAVVCWGSGANGRLGNGSTAGRTTPTPVSGLSDA-VALDA-G 527
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
E HTCA+ +G + WG+G +G LG+G+ P V+ + + V + G HT
Sbjct: 528 ESHTCALRATGAVVCWGEG--QWGRLGNGSTADATTPVTVSNLTDAVDVDA---GGGHTC 582
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+ + G + +G GT G LG+G S P V L ++ A G H+ A+
Sbjct: 583 ALRATGAVVCWGRGTNGQLGNGISGDQSAPVTVFGLNDAISISAGWG--HSCALR----- 635
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP---------NFCRVACG 307
++G WG G+ G+LG+G + P V L + N+ +
Sbjct: 636 -------ATGGAVCWGRGNHGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTT 688
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAV 365
T AL +G V G V GQLG G + G L S +A G H
Sbjct: 689 FGHTCALRRNGTVRCWGYGVDGQLGY----GAFSSSEAGVDVLDLSDARAVAAGMSHTCA 744
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ S E+ WG +G++G+G P+ V L D IA G T A+
Sbjct: 745 MRSTGEIRCWGAADSGQIGNGSAATALLPAPVVNLGD--AVEIAAGYAHTCAL 795
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 108/268 (40%), Gaps = 36/268 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V WG L R+G+ G D + P + G H +
Sbjct: 899 GQVSCWGYAA--------LGRLGN--GSTTDQTAPVTVLDIADAVAVAAG--GEHTCALR 946
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V WG GRLG+ ++ L P + LS+ I L A G HTCAV +G + W
Sbjct: 947 ASGAVSCWGGGGSGRLGNASTANSLRPVAVTGLSDA-IGLAA-GRLHTCAVHSTGAVSCW 1004
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G G LG+G S +P V+G + + VS+ G HT +T+ G F +G GT
Sbjct: 1005 GSGLD--GRLGNGATTSATIPIPVSGLGDALQVSA---GTSHTCAITAPGGAFCWGLGTS 1059
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTV----RAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LG G + P V ++ + R + G HT + +G +
Sbjct: 1060 GELGDGSMATALTPVPVANVADAVMISAGRRNSVGASHTVVLRR------------TGSV 1107
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
WG GRLG+G + P V L
Sbjct: 1108 AAWGAVGVGRLGNGSPKVSF-PIAVVGL 1134
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 130/246 (52%), Gaps = 18/246 (7%)
Query: 51 LNRVGSCFGVKMDSSL--PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
L+ GS + V + +L P+ LE+ + V +ACG RH + K+G+V++WG+ S G+L
Sbjct: 90 LSEKGSVYRVDVTQALYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQL 149
Query: 109 GHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G + P+ + +LS M + V+ G H+ A+++SG ++ WG + G LG G+
Sbjct: 150 GLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRN--DCGQLGLGDS 207
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
P V+ L +SISCG HTA++T G +FTFG G FG LGH ++ PR
Sbjct: 208 QDRCTPTSVDS-LNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPR 266
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
V L G + R ACG +HT + E + K++++G D+ +LG +
Sbjct: 267 LVAELWGAKVTRIACGRYHTLVLQE------------NNKIYSFGCNDQNQLGRSNDSHP 314
Query: 288 LVPTCV 293
VP V
Sbjct: 315 SVPLPV 320
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 30/297 (10%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
IE V CG+ ++ G +Y D T + ++P+ + I VS ++
Sbjct: 77 IEAVGCGDDEVILLSEKGSVYR-VDVTQ-----------ALYLPRMLEAFCR-IPVSQVA 123
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTA 248
CG HT +T GQ++T+G + G LG G + S+S P+ V SL G+ V+ + G
Sbjct: 124 CGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGMPLVQVSAG----- 178
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
G+ S + SG +F WG D G+LG GD + + PT V +L ++CG
Sbjct: 179 -------GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGK 231
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T LT G V+T GS +GQLG+ + +L R+ +L + V IACG YH VL
Sbjct: 232 DHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHTLVLQE 291
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNS---PSLVEALKDKQVKSIACGTNFTAAICLHK 422
++Y++G +LG + D S P L+ + + F++A CL++
Sbjct: 292 NNKIYSFGCNDQNQLGRSN-DSHPSVPLPVLLPQVYKCSLLYREIQRTFSSASCLNR 347
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+ + G LG G G + S P+ + S + + ++ GG H+ ++
Sbjct: 136 GQVYTWGQNS-RGQLGLGKK------GCSISS--PQCVRSLSGMPLVQVSAGGDHSFALS 186
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG G+LG G D P +D+L+ ++CG+ HT +T G ++T+
Sbjct: 187 VSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTF 246
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G G FG LGH + + P+ V L G V+ I+CG +HT V+ ++++FG
Sbjct: 247 GSG--QFGQLGHNSSRNELRPRLV-AELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQ 303
Query: 213 GVLGHGDRKSVSIPREV 229
LG + S+P V
Sbjct: 304 NQLGRSNDSHPSVPLPV 320
>gi|255558248|ref|XP_002520151.1| protein with unknown function [Ricinus communis]
gi|223540643|gb|EEF42206.1| protein with unknown function [Ricinus communis]
Length = 387
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 184/396 (46%), Gaps = 48/396 (12%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALE--SAVVLDVQNIACGGRHAALV 91
V+ WG GT DG LG G D LP+ L+ S V + ++ACGG H +
Sbjct: 21 QVWSWGAGT-DGQLGTGKLE---------DEHLPQLLQFPSLSVRPISSLACGGAHVIAL 70
Query: 92 NK-QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
N G+V +WG + G+LGHG +HP+ + L + I ++ G H+ V+ G ++
Sbjct: 71 NSGDGKVLTWGRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVSDKGCVF 130
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
T GDG+ FG LGHG+ SH P +V+ HV I+CG H+ V+ Q++ FG G
Sbjct: 131 TCGDGS--FGQLGHGDNNSHATPVQVS-YFANRHVHQIACGMRHSLVLLKGNQVYGFGSG 187
Query: 211 TFGVLG--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G LG KS+S+P CG + G+ S++ G L
Sbjct: 188 KRGQLGISKDKIKSISLPL------------VTCGFEDIKINSIITNGDHSAALSVDGHL 235
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+TWG G G P + + ++ F +VA G + +ALT + + + V
Sbjct: 236 YTWGRGFPG------TSDVFTPRHLVSSLQ--FIKVALGWNHALALTGNFFFFCVWMSVC 287
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE--VYTWGKGANGRLGHG 386
A + +RV L V +IA GS H A+LT K + + TWG G +G+LG G
Sbjct: 288 VYCDPTHA---IFDRVS-ILDGMKVVDIAAGSEHSALLTGKMDGTIKTWGWGEHGQLGLG 343
Query: 387 DTDDRNSPSLV----EALKDKQVKSIACGTNFTAAI 418
T D+ +P V EA + + CG+ FT +
Sbjct: 344 STKDQTNPQSVSLDHEAENQEINLKVYCGSGFTFVV 379
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 130/303 (42%), Gaps = 30/303 (9%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHTAVVTSA-GQLF 205
+++WG GT G LG G +P+ + P + +SS++CG H + S G++
Sbjct: 21 QVWSWGAGTD--GQLGTGKLEDEHLPQLLQFPSLSVRPISSLACGGAHVIALNSGDGKVL 78
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
T+G GT G LGHG+ S P+ V L + G H+ V +
Sbjct: 79 TWGRGTSGQLGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVSD------------K 126
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G +FT GDG G+LGHGD + P V+ + ++ACG ++ L VY GS
Sbjct: 127 GCVFTCGDGSFGQLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLKGNQVYGFGS 186
Query: 326 PVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
GQLG + K LP V + I H A L+ +YTWG+G G
Sbjct: 187 GKRGQLGISKDKIKSISLP-LVTCGFEDIKINSIITNGDHSAALSVDGHLYTWGRGFPG- 244
Query: 383 LGHGDTDDRNSP-SLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNN 441
T D +P LV +L Q +A G N A+ + + V S+C C
Sbjct: 245 -----TSDVFTPRHLVSSL---QFIKVALGWNHALALTGNFFFFCVWMSVCVYCDPTHAI 296
Query: 442 FKR 444
F R
Sbjct: 297 FDR 299
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 134/330 (40%), Gaps = 73/330 (22%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V WG GT G LG G + S P+ + + +I+ G H+ V+
Sbjct: 75 GKVLTWGRGT-SGQLG---------HGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVS 124
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+G VF+ G+ S G+LGHG ++ P + +N ++ +ACG H+ + +Y +
Sbjct: 125 DKGCVFTCGDGSFGQLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLKGNQVYGF 184
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPL-----EGIHVSSISCGPWHTAVVTSAGQLFTF 207
G G G LG +S K ++ PL E I ++SI H+A ++ G L+T+
Sbjct: 185 GSGKR--GQLG----ISKDKIKSISLPLVTCGFEDIKINSIITNGDHSAALSVDGHLYTW 238
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA------------------ 249
G G G V PR + S L+ ++ A G H A
Sbjct: 239 GRGFPGT------SDVFTPRHLVS--SLQFIKVALGWNHALALTGNFFFFCVWMSVCVYC 290
Query: 250 -----------------VVEVMVGNSSSSNCS---SGKLFTWGDGDKGRLGHGDKEAKLV 289
VV++ G+ S+ + G + TWG G+ G+LG G + +
Sbjct: 291 DPTHAIFDRVSILDGMKVVDIAAGSEHSALLTGKMDGTIKTWGWGEHGQLGLGSTKDQTN 350
Query: 290 PTCV-----AALVEPNFCRVACGHSLTVAL 314
P V A E N +V CG T +
Sbjct: 351 PQSVSLDHEAENQEINL-KVYCGSGFTFVV 379
>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
Length = 1038
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 155/332 (46%), Gaps = 36/332 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG---VDSDVLHPKLIDALSNMNIELVA 134
V+ IA G RH + G+V+S G G LG G S ++P L+ +NI +A
Sbjct: 70 VRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSG--GVNIVQIA 127
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G H AV G L+ WG ++ L N S +PKRV E + V+ CG H
Sbjct: 128 AGRAHNMAVADDGRLFAWGSNSHG-QLALPSNITSTDIPKRVVSLTETVQVA---CGTDH 183
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
T + +G++F +G D + + P+E+E L V+ G + A+
Sbjct: 184 TIAIVESGRIFVWG-------LQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALT--- 233
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WG + G+LG D + + P V L N VACGHS TVAL
Sbjct: 234 ---------VSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVAL 284
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNR----VEGKLSKSFVEEIACGSYHVAVLTSKT 370
T G ++ GS GQLG+ + K+P++ ++ + V +ACG H L
Sbjct: 285 THEGRLFVCGSDSCGQLGSGR---KVPSQNTMLAVTEMLGTHVTRVACGRCHTLALAGG- 340
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
++Y +G ++G+LG G+ + +P ++AL D
Sbjct: 341 KMYAFGLNSSGQLGSGNVRSQVTPRPIDALTD 372
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 124/272 (45%), Gaps = 37/272 (13%)
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRTV 238
+G+ V +I+ G HT + G++++ G G LG G S +I + S G+ V
Sbjct: 66 DGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLS-GGVNIV 124
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH-GDKEAKLVPTCVAALV 297
+ A G H AV + G+LF WG G+L + + +P V +L
Sbjct: 125 QIAAGRAHNMAVAD------------DGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLT 172
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---PNRVEGKLSKSFVE 354
E +VACG T+A+ SG ++ G Q DG++ P +E ++ V+
Sbjct: 173 ET--VQVACGTDHTIAIVESGRIFVWGL---------QPDGRVLYAPKEIEFFMALPVVQ 221
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
A Y+VA LT ++ WG G+LG D +R +P+ V L V +ACG +
Sbjct: 222 VNAGSDYYVA-LTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSH 280
Query: 415 TAAICLHK---WVSGVDQ--SMCSGCRLPFNN 441
T A+ H+ +V G D + SG ++P N
Sbjct: 281 TVALT-HEGRLFVCGSDSCGQLGSGRKVPSQN 311
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG VL PK +E + L V + G + +
Sbjct: 191 GRIFVWGLQPDGRVLYA-----------------PKEIEFFMALPVVQVNAGSDYYVALT 233
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G +F WG G+LG + + P + L ++N+ VACG HT A+T G L+
Sbjct: 234 VSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVC 293
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G + G LG G +V + G HV+ ++CG HT + + G+++ FG +
Sbjct: 294 GSDSC--GQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHT-LALAGGKMYAFGLNSS 350
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRA 240
G LG G+ +S PR +++L + +V A
Sbjct: 351 GQLGSGNVRSQVTPRPIDALTDVVSVFA 378
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 141/278 (50%), Gaps = 29/278 (10%)
Query: 57 CFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGH 110
C G+ + S+L P+ L+S L + IAC G H L +GEVFSWG + G+LG+
Sbjct: 77 CLGLGDVQSTLEPRRLDS---LSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGN 133
Query: 111 GVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
G + L P I LSN + VACG YH+ +T G+++ WG N G +G G+ +
Sbjct: 134 GTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTAN 191
Query: 170 HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
+P+RV G L+ V +I+CG + V G+++ +G G LG G + P V
Sbjct: 192 QAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 251
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
+L+G+R R ACG HT + + G+++ WG G+LG G+K +
Sbjct: 252 AALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSY 299
Query: 290 PTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
PT V +VE + +A HS + A T GHVY G
Sbjct: 300 PTPV--VVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 145/313 (46%), Gaps = 29/313 (9%)
Query: 76 LDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
L V AC G E+F G G LG G L P+ +D+LS+ I
Sbjct: 42 LQVIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI- 100
Query: 132 LVACGEY----HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
AC Y H T G++++WG Y G LG+G VP ++ L V+
Sbjct: 101 --ACLSYGSGPHIVLATTEGEVFSWGHNAY--GQLGNGTINHGLVPSHISTNLSNKQVTE 156
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWH 246
++CG +H+ V+TS G++F +G G +G G + +IPR V L+ V ACG
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMC 216
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+ AVV+ +G+++ WG G+LG G + P VAAL RVAC
Sbjct: 217 SMAVVD------------TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVAC 264
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-A 364
G++ T+ LT G VY G+ YGQLG +++ P V + + +E AC S H A
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDR-IIEIAACHSTHTSA 323
Query: 365 VLTSKTEVYTWGK 377
T VY WG+
Sbjct: 324 AKTQGGHVYMWGQ 336
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 130/271 (47%), Gaps = 26/271 (9%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC-----GPWHTAVVTSAGQLFTFGD 209
GT G LG G+ S P+R L+ + I+C GP H + T+ G++F++G
Sbjct: 71 GTNCSGCLGLGDVQSTLEPRR----LDSLSDKKIACLSYGSGP-HIVLATTEGEVFSWGH 125
Query: 210 GTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
+G LG+G +P + + L + ACG +H+ + S G++
Sbjct: 126 NAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLT------------SDGEV 173
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPV 327
F WG + G++G G + +P V ++ +ACG ++A+ +G VY G
Sbjct: 174 FAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG 233
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG + P RV L V+ +ACG H VLT + +VY WG + G+LG G
Sbjct: 234 NGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG 292
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ +++ P+ V KD+ ++ AC + T+A
Sbjct: 293 NKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL + AC + + + +
Sbjct: 66 EIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++F+WG G+LG+G LVP+ ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 21/181 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + ++P+ L++ VV+ NIACG +
Sbjct: 171 GEVFAWGYNNS--------GQVGS--GSTANQAIPRRVTGCLQNKVVV---NIACGQMCS 217
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P + AL + ++ VACG HT +T G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 278 VYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 334
Query: 208 G 208
G
Sbjct: 335 G 335
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 159/334 (47%), Gaps = 35/334 (10%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
T Y G GHG +D + P+ EAL +
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHSEALTE 330
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 164/351 (46%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+ + I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V ++ ++ CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C ++ + G AN H DT +P
Sbjct: 325 SEA-LTENF--DISCLISAEDLVDVHVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + + + + GD + G LG +P+ + LE + V +SCG
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K +S P+++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86 HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ G + GS GQL N P V G L V I+CG H AVLT
Sbjct: 194 FALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLT 252
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G +G+LG+ T ++ P LVE + D V I CG+ T A
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLTVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 295 GSYHTLAYV 303
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG ++G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG + + G N V + S+ P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRN-------VPVQSNKPLSVGALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ G+LG+ + P+L++ + + + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHG 315
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 23/321 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+F+WG+ G+LG G +D + +L +D +N I+L++CG HT + G +Y+ G
Sbjct: 1 MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC-GPWHTAVVTSAGQLFTFGDGTFG 213
Y G + ++ R++ E + ++++S G H + ++ +GD + G
Sbjct: 61 NDYG----QTGRQRNNKRFARIDA-FESMRITNVSSNGANHNLAINDKNCIYAWGDNSDG 115
Query: 214 VLGHGD---RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
LG D ++ PR+++SL V+ ACG H+ AV+ + G +F+
Sbjct: 116 QLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVI------------NDGTVFS 163
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG + + P + L ++A G + ++A+T SG + T G +GQ
Sbjct: 164 WGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQ 223
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
LG DG L L + ACG H AVLT + V+T+G G++G+LGH
Sbjct: 224 LGLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSH 283
Query: 391 RNSPSLVEALKDKQVKSIACG 411
SP +V L V I CG
Sbjct: 284 HCSPQMVVDLMGIVVTQITCG 304
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 17/287 (5%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC-G 136
++ I+CG H L+ + G+++S G G+ G ++ IDA +M I V+ G
Sbjct: 36 IKLISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRFAR--IDAFESMRITNVSSNG 93
Query: 137 EYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
H A+ +Y WGD + G+ + + P+++ L V ++CG H+
Sbjct: 94 ANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYRTPRQIKS-LSKFAVVQVACGQSHS 152
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
V + G +F++G +G LG S P+++ L G V+ A G H+ A+
Sbjct: 153 LAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAIT---- 208
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+SG L TWG G+LG G + L PTCV++L + ACG T LT
Sbjct: 209 --------NSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVLT 260
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
G V+T G+ GQLG+ ++ L V +I CG ++
Sbjct: 261 KEGGVFTFGAGSSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCGRFY 307
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 124/253 (49%), Gaps = 21/253 (8%)
Query: 6 MDAFRVSLSSAVSSSSQGSGHDDGDALGD---VFIWGEGTGDGVLGGGLNRVGSCFGVKM 62
+DAF + VSS+ G+ H+ A+ D ++ WG+ + DG LG + +
Sbjct: 78 IDAFESMRITNVSSN--GANHNL--AINDKNCIYAWGDNS-DGQLGVTDQNLKQFYRT-- 130
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV--LHPK 120
P+ ++S V +ACG H+ V G VFSWG G+LG +DS+V + PK
Sbjct: 131 ----PRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLG--IDSNVSSVEPK 184
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
I LS I +A G H+ A+T SG L TWG + FG LG G P V+ L
Sbjct: 185 QILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNS--FGQLGLGTNDGVLSPTCVSS-L 241
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
H++ +CG HTAV+T G +FTFG G+ G LGH P+ V L G+ +
Sbjct: 242 RSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQMVVDLMGIVVTQI 301
Query: 241 ACGVWHTAAVVEV 253
CG ++ EV
Sbjct: 302 TCGRFYALQQDEV 314
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 21/275 (7%)
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHTAVVTSAGQLFTF 207
++ WG G LG G + + K + L H + ISCG HT ++ GQ+++
Sbjct: 1 MFAWGKAIE--GQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSC 58
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC-GVWHTAAVVEVMVGNSSSSNCSSG 266
G +G G R + R +++ + +R + G H A+ + NC
Sbjct: 59 GSNDYGQTGR-QRNNKRFAR-IDAFESMRITNVSSNGANHNLAI--------NDKNC--- 105
Query: 267 KLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
++ WGD G+LG D+ K P + +L + +VACG S ++A+ G V++
Sbjct: 106 -IYAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSW 164
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
GS YGQLG + + KLS ++ +IA G H +T+ + TWGK + G+L
Sbjct: 165 GSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQL 224
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G D SP+ V +L+ + + ACG + TA +
Sbjct: 225 GLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVL 259
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 159/334 (47%), Gaps = 35/334 (10%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
T Y G GHG +D + P+ EAL +
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHSEALTE 330
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 164/351 (46%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+ + I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V ++ ++ CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C ++ + G AN H DT +P
Sbjct: 325 SEA-LTENF--DISCLISAEDLVDVHVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + + + + GD + G LG +P+ + LE + V +SCG
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRGELPEPIQA-LETLTVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K +S P+++ +L G++ ++ +CG +H+ A+ +
Sbjct: 86 HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 146 ------------DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ G + GS GQL N P V G L V I+CG H AVLT
Sbjct: 194 FALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLT 252
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G +G+LG+ T ++ P LVE + D V I CG+ T A
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLTVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 295 GSYHTLAYV 303
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG ++G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG + + G N V + S+ P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRN-------VPVQSNKPLSVGALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ G+LG+ + P+L++ + + + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHG 315
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 25/300 (8%)
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL--VACGEYHTCAVTLS-GD 148
N+ G V+SWG G+ G+G + ++ P + ++ I + +ACG+ HT A+ +
Sbjct: 68 NEDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYG 127
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
LY+WG +G LG G++++ P R+N V+ I+CG H+ +V++ G+L+TFG
Sbjct: 128 LYSWG--CNRWGQLGLGDQINRNQPTRINHSDRATFVA-IACGSQHSMIVSNFGELYTFG 184
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
GT G LG GD P V SL G + V GV H++ V S+GK+
Sbjct: 185 CGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCV------------DSTGKI 232
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALV---EPNFCRVACGHSLTVALTTSGHVYTMGS 325
+++G G+LG G ++ +P + + +F +V CG + T+AL+ +G + + G
Sbjct: 233 YSFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGF 292
Query: 326 PVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
GQLG D P ++E S+ V +IA G YH +T E Y+WG ++G LG
Sbjct: 293 NACGQLGVGSHLDQINPTKIE--FSEK-VLDIATGYYHSLCVTDNGEAYSWGYMSDGGLG 349
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 169/369 (45%), Gaps = 47/369 (12%)
Query: 45 GVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEE 103
G+ G NR G G +++ + P + + IACG +H+ +V+ GE++++G
Sbjct: 127 GLYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCG 186
Query: 104 SGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG 163
+ GRLG G +S P ++ +L I G H+ V +G +Y++G Y G LG
Sbjct: 187 TTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSFGWNRY--GQLG 244
Query: 164 HGNEVSHWVPKRVNGP--LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
G+ SH +P ++ +H + CG HT +++ G++ +FG G LG G
Sbjct: 245 TGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHL 304
Query: 222 SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGH 281
P ++E + + + A G +H+ V + +G+ ++WG G LG
Sbjct: 305 DQINPTKIEFSE--KVLDIATGYYHSLCVTD------------NGEAYSWGYMSDGGLGL 350
Query: 282 GD-----KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
+ + KL+P V H+ + S + +YG+
Sbjct: 351 SEVYTHQTKPKLIPL------------VHIRHT----FSDSNDAF---DEIYGKGDENTT 391
Query: 337 DGKLPNR---VEGKLSK-SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
+ + N ++ K S FVE++ G+++ A++TS ++YT+G G R G+ + +D++
Sbjct: 392 EETIENHKKYIQDKYSTGDFVEKVGAGAWNSAIITSSGKLYTFGYGDTFRTGNHEENDQD 451
Query: 393 SPSLVEALK 401
P ++E K
Sbjct: 452 IPIIIEQDK 460
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 137/280 (48%), Gaps = 25/280 (8%)
Query: 147 GDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLE-GIHVSSISCGPWHT-AVVTSAGQ 203
G +Y+WG YN FG G+G + VP V ++ I + +I+CG HT A+ +
Sbjct: 71 GLVYSWG---YNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYG 127
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+++G +G LG GD+ + + P + V ACG H+ V
Sbjct: 128 LYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIV------------S 175
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
+ G+L+T+G G GRLG GD+ + PT V++LV G + + ++G +Y+
Sbjct: 176 NFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIYSF 235
Query: 324 GSPVYGQLGNPQADGK-LPNRVEGK--LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G YGQLG LP +++ SK ++ CG H L++ E+ ++G A
Sbjct: 236 GWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNAC 295
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
G+LG G D+ +P+ +E ++V IA G + ++C+
Sbjct: 296 GQLGVGSHLDQINPTKIEF--SEKVLDIATG--YYHSLCV 331
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC--RVACGHSLTVALTT 316
SS++ G +++WG G+ G+G + +VP+ V ++ +ACG S T+A+
Sbjct: 64 SSNSNEDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAE 123
Query: 317 SGH-VYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
+ + +Y+ G +GQLG Q + P R+ +FV IACGS H ++++ E+YT
Sbjct: 124 NPYGLYSWGCNRWGQLGLGDQINRNQPTRINHSDRATFV-AIACGSQHSMIVSNFGELYT 182
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+G G GRLG GD R P++V +L KQ+ ++CG + C+
Sbjct: 183 FGCGTTGRLGLGDESPRFKPTVVSSLVGKQI--VSCGAGVMHSSCV 226
>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
castellanii str. Neff]
Length = 395
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 174/364 (47%), Gaps = 28/364 (7%)
Query: 94 QGEVFSWGEESGGRLGHG---VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+G V S G G LG G VL P I AL + V+ G +H+ +T G ++
Sbjct: 2 RGVVLSAGGGQHGSLGQGDAVTQLSVLTP--IRALEAHRVVAVSAGGHHSLVLTEEGRVF 59
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
++G+G + G LGHGNE + + P+R+ V+ IS G H+ +T G+ ++FG G
Sbjct: 60 SFGNGLH--GRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFG 117
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRT---VRAACGVWHTAAVVE-VMVGNSSSSNCSS- 265
FG LGHGD +PRE+ +L+G V T V+E V G S ++
Sbjct: 118 MFGRLGHGDETDQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTD 176
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+++++G G G LGHGD++ +L PT + AL + +ACG + T+ L G V+ G
Sbjct: 177 GRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGL 236
Query: 326 PV--YGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+ + QA L G + + E+ G H +LT + ++ +G G NGRL
Sbjct: 237 DYSEFPKFTEGQARFVLLPSALGLAEE--ITEVRAGEGHCLLLTREGKLLAFGLGKNGRL 294
Query: 384 GHGDTDDRNSPSLVEALKDKQVK---SIACGTNFTAAIC--------LHKWVSGVDQSMC 432
G GD +R +P+ V + IACG A+ L+ + SG +
Sbjct: 295 GLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLA 354
Query: 433 SGCR 436
+G R
Sbjct: 355 NGHR 358
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 161/353 (45%), Gaps = 44/353 (12%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL-S 126
+ALE+ V+ V + GG H+ ++ ++G VFS+G GRLGHG + P+ I +
Sbjct: 32 RALEAHRVVAV---SAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDT 88
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN------GPL 180
+ ++ G H+ A+T G Y++G G FG LGHG+E +P+ + P
Sbjct: 89 TAGVAKISAGTTHSLALTKDGKAYSFGFGM--FGRLGHGDETDQLLPREITLRGHGASPP 146
Query: 181 EGIHVSS---------ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
G V ++ G +H+ ++T+ G++++FG G G LGHGDR P +E+
Sbjct: 147 VGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEA 206
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKLV 289
L R V ACG +T + + G++F +G + + G L+
Sbjct: 207 LADRRIVSMACGSANTLVLDD------------EGRVFFFGLDYSEFPKFTEGQARFVLL 254
Query: 290 PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVE--G 346
P+ + E R GH L LT G + G G+LG +L P V
Sbjct: 255 PSALGLAEEITEVRAGEGHCLL--LTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPS 312
Query: 347 KLSKSFVEEIACGSYH----VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
+ S +IACG+ H V V +Y +G G G+L +G DR SP+
Sbjct: 313 NGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGHRQDRASPT 365
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 24/312 (7%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P IDA S+ ++CG +H+ +T+ GDL+ WG G + G LG G E S +VP +N
Sbjct: 23 PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNP 78
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
E + I+ G H+ +T G +FT+G G FG LGH +PR V+ +
Sbjct: 79 LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG--DGDKGRLGHGDKEAKL-----VPT 291
A HTAA+ E SG+L+ WG +GD + VP+
Sbjct: 139 AIATSGTHTAAITE------------SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPS 186
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS 351
V AL P V+CG T+ALT G ++ G+ +LG G L
Sbjct: 187 KVKALTVP-VASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGV 245
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
+ +IACG YH LT + +V +WG G +G+LG ++ P+ +EAL DK++ IA G
Sbjct: 246 RITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASG 305
Query: 412 TNFTAAICLHKW 423
+ +AAI W
Sbjct: 306 GSSSAAITGWDW 317
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 164/361 (45%), Gaps = 51/361 (14%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GD++IWG+G G R+G FG + +P ++ IA GG H+ +
Sbjct: 50 GDLWIWGKGDG--------GRLG--FGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALT 99
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
QG+VF+WG G LGH V + L P+ +D + I +A HT A+T SG+LY W
Sbjct: 100 HQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMW 159
Query: 153 ----GDGTYNFGLLGHGNEVSHW-VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
GDG G NE VP +V + V+S+SCG + T +T GQL+ +
Sbjct: 160 GREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNW 217
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G + LG GD P V SL+G+R + ACG +H+ A+ E GK
Sbjct: 218 GANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGK 265
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA-------LTTSGHV 320
+ +WG G G+LG + VPT + AL + +A G S + A LT G +
Sbjct: 266 VLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGEL 325
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE-----------IACGSYHVAVLTSK 369
+ G+ QLG P LP + +F+ E I+ G+ H L S+
Sbjct: 326 WMWGNAKDFQLGVP----GLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 381
Query: 370 T 370
+
Sbjct: 382 S 382
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 159/334 (47%), Gaps = 35/334 (10%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
T Y G GHG +D + P+ EAL +
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHSEALTE 330
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 164/351 (46%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+ + I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V ++ ++ CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C ++ + G AN H DT +P
Sbjct: 325 SEA-LTENF--DISCLISAEDLVDVHVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + A GE H+ + + + + GD + G LG
Sbjct: 6 GTDSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE + V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L G++ ++ +CG +H+ A+ + ++F+WG G+LG G + ++
Sbjct: 123 TTLNGIKIIQVSCGHYHSLALSK------------DSQVFSWGKNSHGQLGLGKEFPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVLT +V+T+G +G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLTVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 295 GSYHTLAYV 303
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG ++G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG + + G N V + S+ P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRN-------VPVQSNKPLSVGALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ G+LG+ + P+L++ + + + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHG 315
>gi|296086391|emb|CBI31980.3| unnamed protein product [Vitis vinifera]
Length = 338
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 2/152 (1%)
Query: 503 SRRGSINQGPNEFIDKDEKLDSRSRAQLTRFSSMESFKQSEGRSKR-NKKLEFNSSRVSP 561
+R +I Q NE ++D + R + QL+R SS++SF ++E + + + KLEFN +RVSP
Sbjct: 12 ARSSNILQKSNEIAERD-TMGPRVQGQLSRLSSVDSFSRAESKHYKCDTKLEFNDARVSP 70
Query: 562 IPNGSSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPT 621
NG+ Q G+ + SK N +FG S+K FSAS PGSRIVSRATSP+S + SPP+S +
Sbjct: 71 HLNGNVQRGSFHSSKLSNSLFGGSRKIFSASRPGSRIVSRATSPVSGKSSPPQSAMLAAS 130
Query: 622 LGGLTSPKIVVDDAKRTNDSLSQEVIKLRAQV 653
L + SP+ DD K TNDSLS+E+I LRAQV
Sbjct: 131 LAVVRSPEATDDDPKHTNDSLSREIINLRAQV 162
>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
Length = 753
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 20/237 (8%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-----KSVSIPREVESLKGLRTVRAAC 242
+SCG HTAVV+++G ++T+G G LGHGD KS+ E+ + ++ + AC
Sbjct: 35 LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVAC 94
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G+ HT A+ C G +++WG + G+LG GD + P V L +
Sbjct: 95 GIEHTLAL------------CRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCI 141
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSY 361
V CGH ++AL+ VY+ G V+GQLG + D LP+ V LS +FV ++A G
Sbjct: 142 AVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTS-LSGAFVTQLAAGYS 200
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H AVLT++ +VYT+G G G+LG G T + P LV+AL+ ++ I CG+ T A+
Sbjct: 201 HTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAV 257
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 162/351 (46%), Gaps = 57/351 (16%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHG-----------VDSDVLHPKLIDALSNMN 129
++CG H A+V+ G+V++WG+ GRLGHG ++LH I LS
Sbjct: 35 LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLS--- 91
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
VACG HT A+ G +Y+WG Y G LG G+ H P V L ++
Sbjct: 92 ---VACGIEHTLALCRDG-VYSWGSSEY--GQLGQGDTQQHTRPVYVT-ELSDKKCIAVV 144
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG +H+ +++ Q++++G G G LG + +P V SL G + A G HTA
Sbjct: 145 CGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAV 204
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ + GK++T+G G G+LG G + +P V AL + + CG
Sbjct: 205 LT------------TEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSF 252
Query: 310 LTVALTTSGHVYTMG-SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
TVA+++ ++ G SP Y + I CG++H +T
Sbjct: 253 ETVAVSSEQKLFNWGRSPHYFRF----------------------HMIHCGNWHYLAVTE 290
Query: 369 KTEVYTWGKGANGRLGHGDT-DDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+V+TWG +G+LGH + D P++V+ L + V + + G F+ A+
Sbjct: 291 ARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEFSVAM 341
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 171/368 (46%), Gaps = 57/368 (15%)
Query: 31 ALGDVFIWGEGTGDGVLGGG--LNRVGSCFGVKMDSSLPKALESAVV--LDVQNIACGGR 86
A GDV+ WG+ + G LG G + G S+P +E + + V ++ACG
Sbjct: 47 ASGDVYTWGK-SHKGRLGHGDLIEEEGK--------SMPFRVEILHMHRIKVLSVACGIE 97
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H + + G V+SWG G+LG G P + LS+ V CG YH+ A++
Sbjct: 98 HTLALCRDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSAD 156
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
+Y+WG G + G LG + +P V L G V+ ++ G HTAV+T+ G+++T
Sbjct: 157 QQVYSWGWGVH--GQLGLDSIEDALLPSHVTS-LSGAFVTQLAAGYSHTAVLTTEGKVYT 213
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
FG G +G LG G ++P+ V++L+ R CG + T AV S
Sbjct: 214 FGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAV------------SSEQ 261
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR---VACGHSLTVALTTSGHVYTM 323
KLF WG P++ R + CG+ +A+T + V+T
Sbjct: 262 KLFNWGRS------------------------PHYFRFHMIHCGNWHYLAVTEARQVFTW 297
Query: 324 GSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G +GQLG+ + D L V KL++SFV + G+ + + +V+ WG+ +G+
Sbjct: 298 GFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQ 357
Query: 383 LGHGDTDD 390
H +++
Sbjct: 358 SLHSSSEE 365
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 93/188 (49%), Gaps = 22/188 (11%)
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD---KEAKLVPTCVA 294
VR +CG HTA V +SG ++TWG KGRLGHGD +E K +P V
Sbjct: 33 VRLSCGQHHTAVV------------SASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVE 80
Query: 295 AL--VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR--VEGKLSK 350
L VACG T+AL G VY+ GS YGQLG Q D + R +LS
Sbjct: 81 ILHMHRIKVLSVACGIEHTLALCRDG-VYSWGSSEYGQLG--QGDTQQHTRPVYVTELSD 137
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
+ CG YH L++ +VY+WG G +G+LG +D PS V +L V +A
Sbjct: 138 KKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAA 197
Query: 411 GTNFTAAI 418
G + TA +
Sbjct: 198 GYSHTAVL 205
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN---PQADGK-LPNRVE-GKLSKS 351
V+ R++CG T ++ SG VYT G G+LG+ + +GK +P RVE + +
Sbjct: 28 VQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRI 87
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACG 411
V +ACG H L + VY+WG G+LG GDT P V L DK+ ++ CG
Sbjct: 88 KVLSVACGIEHTLAL-CRDGVYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCG 146
Query: 412 TNFTAAI 418
+ A+
Sbjct: 147 HYHSLAL 153
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 42/231 (18%)
Query: 25 GHDDGDALG---DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
GH AL V+ WG G + GL+ + D+ LP + S V +
Sbjct: 146 GHYHSLALSADQQVYSWGWGVHGQL---GLDSIE-------DALLPSHVTSLSGAFVTQL 195
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
A G H A++ +G+V+++G G+LG G S P+L+ AL I L+ CG + T
Sbjct: 196 AAGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETV 255
Query: 142 AVTLSGDLYTWGDGTYNF-----------------------------GLLGHGNEVSHWV 172
AV+ L+ WG + F G LGH + H +
Sbjct: 256 AVSSEQKLFNWGRSPHYFRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLL 315
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
V L V++ S G + + + GQ++ +G G H + +
Sbjct: 316 FPTVVQKLNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQSLHSSSEEI 366
>gi|196010051|ref|XP_002114890.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
gi|190582273|gb|EDV22346.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
Length = 697
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 156/366 (42%), Gaps = 31/366 (8%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
VF+WG S L + L +D + + CG+ V+ DG
Sbjct: 320 VFTWGSSSSKPLMLNLPQRSLQITRVDVSRTQKMGVTNCGQIVIWEVSRCTKKIVQLDGK 379
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
+ ++ +P+ + G ++++ +SCG TA +T G L TFG G G LG
Sbjct: 380 -------NDRNINIDIPRLLEGQ-SVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLG 431
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
HG+ + P+ VESL G V +CG H A+ + +LF WG GD
Sbjct: 432 HGNFNEAAHPKIVESLIGYEIVNVSCGASHIMAIT------------AEHELFAWGRGDN 479
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA 336
GRLG + + VP + V CG ++ L G + GS +L +
Sbjct: 480 GRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLDTS 539
Query: 337 DGKLPN------RVEGK-LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
D L + RV LS +E++A G+ H AV+T ++YT G G+LG+ +
Sbjct: 540 DTGLVDEKHSLTRVPSMPLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQSK 599
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVDQSMCSGCRLPFNNFKRK 445
R S V +L KQ+K IACG FT A+ ++ W G + G F +R
Sbjct: 600 QRVSAKQVSSLNHKQIKYIACGDAFTIAVTADNEVYAWGKGSRGRLGLGTEKNFVEPQRI 659
Query: 446 RHNCYN 451
N YN
Sbjct: 660 TFNHYN 665
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 22/278 (7%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
++ +P+ LE V+++ +++CG A + +G + ++G + G LGHG ++ HPK+
Sbjct: 384 INIDIPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNEAAHPKI 443
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+++L I V+CG H A+T +L+ WG G + G LG N ++ VP+ + P E
Sbjct: 444 VESLIGYEIVNVSCGASHIMAITAEHELFAWGRG--DNGRLGTSNTKTYSVPELIKLP-E 500
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL-------GHGDRKSVSIPREVESLKG 234
SS+ CG + V+ G L G L G D K L
Sbjct: 501 TYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLDTSDTGLVDEKHSLTRVPSMPLSS 560
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
L + A G HTA + E GKL+T G G+LG+ + ++ V+
Sbjct: 561 LSIEQVAAGTSHTAVITE------------DGKLYTCGVNTYGQLGYEQSKQRVSAKQVS 608
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+L +ACG + T+A+T VY G G+LG
Sbjct: 609 SLNHKQIKYIACGDAFTIAVTADNEVYAWGKGSRGRLG 646
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 16/232 (6%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
+++ PK +ES + ++ N++CG H + + E+F+WG GRLG P+LI
Sbjct: 437 EAAHPKIVESLIGYEIVNVSCGASHIMAITAEHELFAWGRGDNGRLGTSNTKTYSVPELI 496
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN----EVSHWVPKRVNG 178
V CG + + G L G N L + + H + + +
Sbjct: 497 KLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLDTSDTGLVDEKHSLTRVPSM 556
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
PL + + ++ G HTAV+T G+L+T G T+G LG+ K ++V SL +
Sbjct: 557 PLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQSKQRVSAKQVSSLNHKQIK 616
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
ACG T AV + +++ WG G +GRLG G ++ + P
Sbjct: 617 YIACGDAFTIAVT------------ADNEVYAWGKGSRGRLGLGTEKNFVEP 656
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ IACG V EV++WG+ S GRLG G + + + P+ I ++ N E+++
Sbjct: 614 QIKYIACGDAFTIAVTADNEVYAWGKGSRGRLGLGTEKNFVEPQRI-TFNHYNFEILSLA 672
Query: 137 EYHTCAVTLSGDLYTWGD 154
H + + Y GD
Sbjct: 673 SRHGNTLMSTRLKYNNGD 690
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 195/431 (45%), Gaps = 77/431 (17%)
Query: 32 LGDVFIWGEGTGDGVLGGGLNRVGS---CFGVKMDSSLPKALESAVVLDVQNIACGGRHA 88
GDV+ WG + +G LG G GS F K +L K+L+ ++ V ACG H+
Sbjct: 52 FGDVYSWGR-SKEGQLGIGQGYGGSDKVMFVAK--PTLIKSLQHERIIKV---ACGNFHS 105
Query: 89 ALVNKQGEVFSWGE-----ESGGRLG-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCA 142
+ G+V+ WG+ ES L + + P+L S+ I + +Y
Sbjct: 106 LALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEMPRL----SSQRIIEASVSQY---- 157
Query: 143 VTLSGD--LYTWGDGTY----------------NFGLLGHGNEVSHWVPKRVNG-PLEGI 183
LSG+ Y GT LG +++ +P ++ P E +
Sbjct: 158 --LSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVV 215
Query: 184 HVSSISCGPW-HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
VS G W +A VT +G+L+T+G G LG G+R S P+ V++L + V C
Sbjct: 216 DVS----GGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVC 271
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-- 300
G H A+ + G++++WG G G+LGHG+ ++ L P + VE N
Sbjct: 272 GRQHICAITD------------QGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNER 319
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-------------PNRVEGK 347
+VACG + T+ + G +Y G YGQLG+ + L P V+
Sbjct: 320 IAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSL 379
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
+K ++ +ACG H V+T + EVY WG G++G LG G+ + P L+ +L +++ S
Sbjct: 380 ETKK-IKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIAS 438
Query: 408 IACGTNFTAAI 418
I G T +
Sbjct: 439 ITAGEKHTIVV 449
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 150/324 (46%), Gaps = 32/324 (9%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
+ ++ ++P ++ + +V +++ G +A V K G +++WG G+LG G P
Sbjct: 197 IDLNQTIPMQIQD-IPEEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTP 255
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+L+ L ++NI V CG H CA+T G++Y+WG G FG LGHGN S+ PK++
Sbjct: 256 QLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGV--FGQLGHGNVKSYLHPKKIQQF 313
Query: 180 LE-GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS------------VSIP 226
+E ++ ++CG T V + G L+ FG G +G LG + SIP
Sbjct: 314 VELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIP 373
Query: 227 REVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA 286
V+SL+ + ACG HT V + +++ WG G G LG G+K
Sbjct: 374 IVVKSLETKKIKNVACGHLHTIVVTD------------ENEVYQWGWGSSGALGLGNKRF 421
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG 346
+LVP + +L + G T+ + S T + Y L N + L +V+
Sbjct: 422 QLVPQLITSLSGEEIASITAGEKHTIVVRCSD--VTSFAYDYKSLINEKKYADLIFKVQD 479
Query: 347 K--LSKSFVEEIACGSYHVAVLTS 368
K S S + C + +L S
Sbjct: 480 KKIYSHSLFIKSRCQKLYSIILFS 503
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 174/411 (42%), Gaps = 83/411 (20%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV---DSD----VLHP 119
P +E + + G H+ V++ G+V+SWG G+LG G SD V P
Sbjct: 25 PTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKP 84
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
LI +L + I VACG +H+ A+T G +Y WG L S + NG
Sbjct: 85 TLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQ------LHRLDESQSSLDIQSTNGL 138
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV------------------------- 214
+E +SS + S Q + +
Sbjct: 139 IEMPRLSS------QRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKH 192
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LG + +IP +++ + V G W +A V SG+L+TWG
Sbjct: 193 LGKIIDLNQTIPMQIQDIP--EEVVDVSGGWAFSAAV-----------TKSGRLYTWGFN 239
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP 334
+KG+LG G++ P V L++ N V CG A+T G VY+ G V+GQLG+
Sbjct: 240 EKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGH- 298
Query: 335 QADGKLPNRVEGKLSKSFVE------EIACGSYHVAVLTSKTEVYTWGKGANGRLG---- 384
G + + + K + FVE ++ACGS V + + +Y +G G G+LG
Sbjct: 299 ---GNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEE 355
Query: 385 --HGDTDDRNS------PSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
H D R++ P +V++L+ K++K++ACG T + +++W
Sbjct: 356 TQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQW 406
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 157/345 (45%), Gaps = 39/345 (11%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG--- 153
V S G+ G+LGH + L P +I+ L I GE H+ AV+ GD+Y+WG
Sbjct: 3 VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62
Query: 154 DGTYNFGLLGHGNEVSHWVPK-RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+G G G++ +V K + L+ + ++CG +H+ +T G+++ +G
Sbjct: 63 EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQ--- 119
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
L D S+ +++S GL + R + A+V + + G + + + G
Sbjct: 120 --LHRLDESQSSL--DIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKD 175
Query: 272 GDGDK----------GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
D DK LG + +P + + E V+ G + + A+T SG +Y
Sbjct: 176 DDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEE-VVDVSGGWAFSAAVTKSGRLY 234
Query: 322 TMGSPVYGQLGNPQADGKLPNR---VEGKLSKSFVE----EIACGSYHVAVLTSKTEVYT 374
T G GQLG L NR +L K+ ++ + CG H+ +T + EVY+
Sbjct: 235 TWGFNEKGQLG-------LGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYS 287
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKD--KQVKSIACGTNFTAA 417
WG G G+LGHG+ P ++ + +++ +ACG+NFT
Sbjct: 288 WGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMV 332
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 15/128 (11%)
Query: 320 VYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V ++G GQLG+ L P +EG L K ++ ++ G H ++ +VY+WG+
Sbjct: 3 VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVS-GEAHSLAVSRFGDVYSWGRS 61
Query: 379 ANGRLG----HGDTDDRN---SPSLVEALKDKQVKSIACGTNFTAAIC----LHKW--VS 425
G+LG +G +D P+L+++L+ +++ +ACG + A+ +++W +
Sbjct: 62 KEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLH 121
Query: 426 GVDQSMCS 433
+D+S S
Sbjct: 122 RLDESQSS 129
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 169/365 (46%), Gaps = 47/365 (12%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG G DG LG G + L +E+ +V+++ G R++ +
Sbjct: 7 VIAWGSGE-DGQLG---------LGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++F+WG G LGH ++ P L+ +L+++ I A G +H AV G Y WG
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 154 DGTYNFGLLGH-------GNEVSH--WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
Y G G G V +PKR L V ++ G H+ V+T G +
Sbjct: 117 GNEY--GQCGEEPSKDETGRPVRRDIVIPKRCAPQLT---VRQVAAGGTHSVVLTREGYV 171
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+T+G GD K +SIP V+ L+ +R + A G +H A+ E
Sbjct: 172 WTWGQ----PWPPGDIKQISIPVRVQGLENVRLI--AVGAFHNLALKE------------ 213
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G L+ WG+ + G+LG GD + + P V L + +A G + ALT G VY G
Sbjct: 214 DGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG 273
Query: 325 SPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
+G+LG N ++ LP +V L+ + +++CG H LT ++++G+G +G
Sbjct: 274 RGEHGRLGFGDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHG 332
Query: 382 RLGHG 386
RLG+G
Sbjct: 333 RLGYG 337
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG---------EESGGRLGHGVDS 114
S P ++S + + A GG H V+ QG ++WG E S G V
Sbjct: 79 ESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D++ PK + + VA G H+ +T G ++TWG G ++S +P
Sbjct: 139 DIVIPK--RCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP----GDIKQIS--IPV 190
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
RV G LE + + I+ G +H + G L+ +G+ +G LG GD + S P V+ L
Sbjct: 191 RVQG-LENVRL--IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDD 247
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
L V A G WH+ A+ + G+++ WG G+ GRLG GD K +K++P
Sbjct: 248 LTLVDIAAGGWHSTALT------------NEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----------------PQA 336
V L + +V+CG + +VALT G +++ G +G+LG P
Sbjct: 296 VNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPL 355
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+G+ + E K + +ACG H +
Sbjct: 356 EGRFNHTDEEDDGKWIAKHVACGGRHTLAIVE 387
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 35/334 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V +WG G+LG G D + +++AL N+ V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWG--W 64
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
G LGH E + L + + + G WH V G+ + +G +G G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 217 HGD---------RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
R+ + IP+ +R V A G S G
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAG--------------GTHSVVLTREGY 170
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG GD + +P V L V H+L AL G ++ G+
Sbjct: 171 VWTWGQ----PWPPGDIKQISIPVRVQGLENVRLIAVGAFHNL--ALKEDGTLWAWGNNE 224
Query: 328 YGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
YGQLG + P V+G + V+ IA G +H LT++ EVY WG+G +GRLG G
Sbjct: 225 YGQLGTGDTQPRSFPIPVQGLDDLTLVD-IAAGGWHSTALTNEGEVYGWGRGEHGRLGFG 283
Query: 387 DTDDRNS--PSLVEALKDKQVKSIACGTNFTAAI 418
D D + P V L + + ++CG + A+
Sbjct: 284 DNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 41/274 (14%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
V+ D +PK A L V+ +A GG H+ ++ ++G V++WG+ G + P
Sbjct: 136 VRRDIVIPK--RCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQP----WPPGDIKQISIP 189
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ L N + L+A G +H A+ G L+ WG+ Y G LG G+ P V G
Sbjct: 190 VRVQGLEN--VRLIAVGAFHNLALKEDGTLWAWGNNEY--GQLGTGDTQPRSFPIPVQG- 244
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSIPREVESLKGLRT 237
L+ + + I+ G WH+ +T+ G+++ +G G G LG GD + S +P++V L G
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
++ +CG H+ A+ G++F++G GD GRLG+G K P + +
Sbjct: 305 IQVSCGGTHSVALTR------------DGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDI 352
Query: 298 EPNFCR----------------VACGHSLTVALT 315
P R VACG T+A+
Sbjct: 353 PPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIV 386
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
S+ + WG G+ G+LG G E K + + V AL N V G ++A+ G ++T
Sbjct: 2 ASATSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFT 61
Query: 323 MGSPVYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G G LG+P P+ V+ S V + A G +H + + Y WG
Sbjct: 62 WGWNQRGTLGHPPETKTESTPSLVKSLASVKIV-QAAIGGWHCLAVDDQGRAYAWGGNEY 120
Query: 381 GRLGHGDTDDRN 392
G+ G + D
Sbjct: 121 GQCGEEPSKDET 132
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ S T V WG G +G+LG G +++ S+VEAL+ V+S+ G+ + AIC
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAIC 54
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 175/382 (45%), Gaps = 68/382 (17%)
Query: 66 LPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
LP ++ +++ + IACG HA A++ V SWG G+LG G + HP I
Sbjct: 130 LPTLIKQGLIVSM--IACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISG 187
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
LS VA G H+ ++ G+L+++G GT FG LGHGNE+ + P+ ++ L G H
Sbjct: 188 LSQSIPVFVAAGSQHSFVLSKFGELFSFGCGT--FGRLGHGNELPSFNPRPIS-TLVGKH 244
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ S++ G H+A V S G L+T+G +G LG G K ++P + + L+ V+ CG
Sbjct: 245 IVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGK 304
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN--FC 302
HT V++V +G ++++G G+LG G + P + ++ N
Sbjct: 305 NHT-LVLDV-----------NGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEII 352
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLG------------------------------ 332
+A G+ + LT G VY+ G G LG
Sbjct: 353 DIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSY 412
Query: 333 -------NPQADGKLPNRVEGKLSKSFVE----------EIACGSYHVAVLTSKTEVYTW 375
N ++ + N KL VE +IA G +H A++TS +YT+
Sbjct: 413 KEIYGEYNSDSENDINNN-NAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTF 471
Query: 376 GKGANGRLGHGDTDDRNSPSLV 397
G G N RLG+ +D++ P +V
Sbjct: 472 GLGDNFRLGNNCQEDQDMPCIV 493
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 112/235 (47%), Gaps = 17/235 (7%)
Query: 181 EGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
+G+ VS I+CG H AV+ + + ++G +G LG GD+ + P + L V
Sbjct: 136 QGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGLSQSIPVF 195
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A G H+ + + G+LF++G G GRLGHG++ P ++ LV
Sbjct: 196 VAAGSQHSFVLSKF------------GELFSFGCGTFGRLGHGNELPSFNPRPISTLVGK 243
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIAC 358
+ VA G + A+ + G +YT G YGQLG LPN+ +L + + ++ C
Sbjct: 244 HIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNK-NKELERFNIVKVVC 302
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV--EALKDKQVKSIACG 411
G H VL VY++G G+LG G D P+ + + ++ ++ IA G
Sbjct: 303 GKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAG 357
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 13/210 (6%)
Query: 223 VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
+ +P ++ +GL ACG H AV+ + + +WG G+LG G
Sbjct: 128 IKLPTLIK--QGLIVSMIACGDSHALAVLP-----------NDATVLSWGCNRWGQLGLG 174
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN 342
D+ + PT ++ L + VA G + L+ G +++ G +G+LG+
Sbjct: 175 DQVNRCHPTPISGLSQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNP 234
Query: 343 RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
R L + +A G H A + S+ +YTWG G+LG G P+ + L+
Sbjct: 235 RPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELER 294
Query: 403 KQVKSIACGTNFTAAICLHKWVSGVDQSMC 432
+ + CG N T + ++ V ++C
Sbjct: 295 FNIVKVVCGKNHTLVLDVNGHVYSFGFNVC 324
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 189/406 (46%), Gaps = 50/406 (12%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V +WG G G LG L+ GS F + L +ALES + +++CGG H ++ +
Sbjct: 30 VALWGNGD-QGRLG--LSESGSQF----EPVLCRALESH---EPCSVSCGGAHTLILTDK 79
Query: 95 GEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G VF+ G S G+LG + + P + + + +A G YH+ A+T SG+ Y WG
Sbjct: 80 GRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWG 138
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
+ LG + + P+++ L G+ + +++ G H+ + GQ+ ++G FG
Sbjct: 139 RNSEGQLGLGKRAKSVYITPQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197
Query: 214 VLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
LGHG+ PR + L+ L+ + G+ H+A +
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADD------------ 245
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
SG ++++G G +LG G+ P + L P ++CG T A+T G +YT G
Sbjct: 246 SGTIYSFGQGSMCQLGLGNNNDASQPCPIPDL--PRVSSISCGGYHTGAITQDGDIYTWG 303
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN---- 380
S +G LG+ P R+E L+++F+ EI+CG H A + S +++WG G +
Sbjct: 304 SNEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGSYGTY 361
Query: 381 --------GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G D P +E ++CG N TAAI
Sbjct: 362 ATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 50/320 (15%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVACGE 137
+IA G H+A + GE + WG S G+LG G S + P+ +++L+ M ++ +A G
Sbjct: 117 HIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGT 176
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN---------EVSHWVPKRVNGPLEGIHVSSI 188
H+ + +G + +W GT FG LGHG + + + P+ ++ LE + + S+
Sbjct: 177 DHSLGLAETGQVLSW--GTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIH-CLEKLQIRSV 233
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
S G H+A +G +++FG G+ LG G+ S P + L R +CG +HT
Sbjct: 234 SAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLP--RVSSISCGGYHTG 291
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
A+ + G ++TWG + G LG G + A P + +L E ++CG
Sbjct: 292 AITQ------------DGDIYTWGSNEHGCLGSGFR-ASSKPLRLESLAEAFMSEISCGW 338
Query: 309 SLTVALTTSGHVYTMG-SPVYGQLGNPQAD---GKL------------PNRVEGKLSKSF 352
T A+ + G++++ G YG QA+ G+L P ++ +LS
Sbjct: 339 KHTAAI-SDGYIFSWGWGGSYGTYAT-QAESSGGQLGVGTDFDFFEPVPIEMDDRLS--- 393
Query: 353 VEEIACGSYHVAVLTSKTEV 372
++CG H A + + E+
Sbjct: 394 ALHVSCGFNHTAAILEEIEI 413
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 135/303 (44%), Gaps = 48/303 (15%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+ ++WG + +G LG G R S + P+ +ES + ++ +A G H+ +
Sbjct: 132 GETYVWGRNS-EGQLGLG-KRAKSVY------ITPQKMESLAGMRLKALALGTDHSLGLA 183
Query: 93 KQGEVFSWGEESGGRLGHGV---------DSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
+ G+V SWG G LGHG D++ P++I L + I V+ G H+
Sbjct: 184 ETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACA 243
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
SG +Y++G G+ LG+ N+ S P + VSSISCG +HT +T G
Sbjct: 244 DDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP-----DLPRVSSISCGGYHTGAITQDGD 298
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G G LG G R S S P +ESL +CG HTAA+
Sbjct: 299 IYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI------------- 344
Query: 264 SSGKLFTWGDGDK------------GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
S G +F+WG G G+LG G P + + V+CG + T
Sbjct: 345 SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHT 404
Query: 312 VAL 314
A+
Sbjct: 405 AAI 407
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 167/360 (46%), Gaps = 49/360 (13%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
I+CG H AL+ K G +F +G + G+LG G V P + AL + + L ACG H
Sbjct: 30 QISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNH 89
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G +++ G + G LG G+ +R++ + ++ G +A +T
Sbjct: 90 TLICTGEGRVFSSGGNSE--GQLGLGDCEERTTFRRIHALDSLGPIKMLAAGSNTSAALT 147
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+G+LF +GD T G +G G P+EV G +CG +H+A V
Sbjct: 148 ESGKLFMWGDNTEGQIGLGKESHAPWPQEVSV--GAPVSWVSCGYYHSALVT-------- 197
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
++G L+T+G+ D G+LG ++ VP V ++ EP +VACG TVALT
Sbjct: 198 ----AAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEP-VRQVACGGGHTVALTGG 252
Query: 318 G-------------------------HVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSK 350
G ++T G +GQLG+ + +LP VE K
Sbjct: 253 GSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVE-HFKK 311
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSI 408
V ++ACG H AV+T +YT+G G +G+LG GD + N P+L V+++
Sbjct: 312 GRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLKYGVQAV 371
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 153/309 (49%), Gaps = 38/309 (12%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
KAL+S VL ACG H + +G VFS G S G+LG G + + I AL +
Sbjct: 73 KALKSEKVLLA---ACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDS 129
Query: 128 MN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ I+++A G + A+T SG L+ WGD T G +G G E P+ V+ G VS
Sbjct: 130 LGPIKMLAAGSNTSAALTESGKLFMWGDNTE--GQIGLGKESHAPWPQEVS---VGAPVS 184
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK--SVSIPREVESLKGLRTVRAACGV 244
+SCG +H+A+VT+AG L+TFG+ G LG + +P+ V S+ G + ACG
Sbjct: 185 WVSCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSI-GEPVRQVACGG 243
Query: 245 WHTAAVVEVMVGNSSSS---NCSSG--------------KLFTWGDGDKGRLGHGD--KE 285
HT A + G S+ C+ G +LFT+G G G+LGHG E
Sbjct: 244 GHTVA----LTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFE 299
Query: 286 AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE 345
++L P V + +VACG + + +T G +YT G +G+LG D N+ +
Sbjct: 300 SRL-PRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLG--LGDENFTNQFK 356
Query: 346 GKLSKSFVE 354
L F++
Sbjct: 357 PTLCSRFLK 365
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 149/316 (47%), Gaps = 49/316 (15%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT +T +G L+ +G + N+G LG G++V+ P V L+ V +CG
Sbjct: 31 ISCGDEHTALITKNGRLFMFG--SNNWGQLGLGSKVTVNKPTCVK-ALKSEKVLLAACGR 87
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
HT + T G++F+ G + G LG GD + + R + +L L ++ A G +AA+
Sbjct: 88 NHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKMLAAGSNTSAALT 147
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E SGKLF WGD +G++G G + P V+ V V+CG+ +
Sbjct: 148 E------------SGKLFMWGDNTEGQIGLGKESHAPWPQEVS--VGAPVSWVSCGYYHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF---VEEIACGSYHVAVLT- 367
+T +G +YT G G+LG +LP + +S V ++ACG H LT
Sbjct: 194 ALVTAAGALYTFGERDSGKLGLTTE--QLPRHRVPQPVRSIGEPVRQVACGGGHTVALTG 251
Query: 368 ------------------------SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKD 402
S+ ++T+G G G+LGHG + P LVE K
Sbjct: 252 GGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKK 311
Query: 403 KQVKSIACGTNFTAAI 418
+V+ +ACG N +A I
Sbjct: 312 GRVRQVACGENHSAVI 327
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ T +G +G G +S P E +V V ++CG H+ALV
Sbjct: 150 GKLFMWGDNT-EGQIGLG-----------KESHAPWPQEVSVGAPVSWVSCGYYHSALVT 197
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVT------ 144
G ++++GE G+LG + H P+ + ++ + VACG HT A+T
Sbjct: 198 AAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGE-PVRQVACGGGHTVALTGGGSTR 256
Query: 145 ------------LSGDLYTWGDGTYNFGL-----LGHGNEVSHWVPKRVNGPLEGIHVSS 187
L+G L+ D + FGL LGHG V R+ + V
Sbjct: 257 RRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQ 316
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
++CG H+AV+T G L+TFGDG G LG GD
Sbjct: 317 VACGENHSAVITDGGLLYTFGDGRHGKLGLGD 348
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
+I+CG H A++T ++ +G G+LG G N P+ V+ALK ++V ACG N
Sbjct: 30 QISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNH 89
Query: 415 TAAIC 419
T IC
Sbjct: 90 T-LIC 93
>gi|55742244|ref|NP_001006906.1| NIMA-related kinase 8 [Xenopus (Silurana) tropicalis]
gi|49670682|gb|AAH75274.1| NIMA (never in mitosis gene a)- related kinase 8 [Xenopus
(Silurana) tropicalis]
Length = 697
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 150/339 (44%), Gaps = 42/339 (12%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V++WG G+ + + P L N + V+ G VT SG L W
Sbjct: 321 VYTWGS--------GISTPLRLPML-----NTEVVQVSAGRTQKAGVTKSGRLIMWEATP 367
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G + H P+ ++ LEG + + +SCG TA +T G + TFG G+ G
Sbjct: 368 VGTGAPSLPGSIEHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 427
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGH + V+ P+ VE L G V +CG H AV + ++F+WG
Sbjct: 428 CLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAV------------SNEKEVFSWGR 475
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD GRLG G +E+ P V E RV CG ++ LT + + GS + +LG
Sbjct: 476 GDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGIDSSMILTVANQLLACGSNRFNKLGF 535
Query: 334 PQADGKLPNRVEGKLSKSFV-----------EEIAC---GSYHVAVLTSKTEVYTWGKGA 379
+ E ++ +++ E I C G+ H AV+T+ + YT+G
Sbjct: 536 DRILSASEPSSEDQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFGSNQ 595
Query: 380 NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+LG + P LV AL+ +V +ACG +T A+
Sbjct: 596 HGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAV 634
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 157/334 (47%), Gaps = 20/334 (5%)
Query: 33 GDVFIWGE---GTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
G + +W GTG L G + F + + LE + +++++CG A
Sbjct: 358 GRLIMWEATPVGTGAPSLPGSIEHAQPQF-------ISRFLEGQSGVTIKHVSCGDLFTA 410
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+ +G + ++G S G LGH +DV PK+++ L I V+CG H AV+ ++
Sbjct: 411 CLTDRGIIMTFGSGSNGCLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAVSNEKEV 470
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
++WG G + G LG G++ S+ P++V P E + CG + ++T A QL G
Sbjct: 471 FSWGRG--DNGRLGLGSQESYNSPQQVIIPPE-YEAQRVVCGIDSSMILTVANQLLACGS 527
Query: 210 GTFGVLGHGDRKSVSIPR---EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS- 265
F LG S S P +VE +++A + A++ VG S S+ ++
Sbjct: 528 NRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQSA--PLNQEAILCADVGTSHSAVVTAL 585
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+ +T+G G+LG VP V+AL VACG + TVA+ G V+T G
Sbjct: 586 GQCYTFGSNQHGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAVGAEGQVFTWGK 645
Query: 326 PVYGQLGNPQADGKLPNRVEGKLSKSF-VEEIAC 358
G+LG +P V+ + + S+ V +AC
Sbjct: 646 GARGRLGRRDEGIGIPKIVQLEENHSYVVTSVAC 679
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 152/357 (42%), Gaps = 40/357 (11%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP------KLIDALSNMNI 130
+V ++ G A V K G + W G + + H + ++ S + I
Sbjct: 340 EVVQVSAGRTQKAGVTKSGRLIMWEATPVGTGAPSLPGSIEHAQPQFISRFLEGQSGVTI 399
Query: 131 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 190
+ V+CG+ T +T G + T+G G+ G LGH N PK V L G + +SC
Sbjct: 400 KHVSCGDLFTACLTDRGIIMTFGSGSN--GCLGHANFNDVTQPKIVED-LLGYEIVHVSC 456
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H V++ ++F++G G G LG G ++S + P++V R CG+
Sbjct: 457 GASHAIAVSNEKEVFSWGRGDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGI------ 510
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--------------HGDKEAKLVPTCVAAL 296
+SS + +L G +LG ++ P A L
Sbjct: 511 ------DSSMILTVANQLLACGSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQSAPL 564
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEE 355
+ G S + +T G YT GS +GQLG + + ++P V L V
Sbjct: 565 NQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSA-LQGVKVTM 623
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ--VKSIAC 410
+ACG + + ++ +V+TWGKGA GRLG D + P +V+ ++ V S+AC
Sbjct: 624 VACGDAYTVAVGAEGQVFTWGKGARGRLGRRD-EGIGIPKIVQLEENHSYVVTSVAC 679
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV 327
++TWG G L ++ +V+ G + +T SG + +
Sbjct: 321 VYTWGSGISTPLR-------------LPMLNTEVVQVSAGRTQKAGVTKSGRLIMWEATP 367
Query: 328 YGQLGNPQADGKLPNRVEGKLSKSF-------VEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G G P G + + +S+ ++ ++CG A LT + + T+G G+N
Sbjct: 368 VGT-GAPSLPGSIEHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSN 426
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
G LGH + +D P +VE L ++ ++CG + A+ K V
Sbjct: 427 GCLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAVSNEKEV 470
>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
Length = 1128
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 175/368 (47%), Gaps = 44/368 (11%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH----PK 120
+LPK+L V+ +Q ++CG H + ++KQG VFS+G S G+LG V+ + P
Sbjct: 33 NLPKSLSFEVL--IQQVSCGSAHTSFISKQGYVFSFGCNSDGQLG--VNDPAIKFSSAPL 88
Query: 121 LIDALSNM--NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGH-GNEVSH----WVP 173
LI L ++ N ++CG +HT +T GD+Y WG L G G +++ + P
Sbjct: 89 LISDLVSLQTNPVQISCGGFHTAVLTSVGDVYIWGRN-----LQGQCGRSINYNQFMFAP 143
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK 233
+++ + CG HTAVV+S G+L+TFGD + G LG G ++ R +
Sbjct: 144 HKLHTDSANKTFRQVDCGDQHTAVVSSTGELYTFGDNSEGQLGIGVEFKNTVDR-AALVT 202
Query: 234 GL--RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
G+ T++ +CG HT + + G +F G + L G + P
Sbjct: 203 GISEETIQVSCGYKHTLVL------------TNHGTVFGMGTNKRYELASGTLQKSSQPI 250
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR-VEGKLSK 350
+ + ++ G +VA+T+ + GS +G +PQ R V+ LSK
Sbjct: 251 RIQTIDMFAVEKIIAG-GFSVAITSQNELLVWGSGDFGVFQSPQKIFMEDVRFVDVSLSK 309
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
S+ S+ A+ + VYTWG+ G+LG GD R P+ + L+ K+V+ +
Sbjct: 310 SY------DSFGAAI-DDQGFVYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVRQLVA 362
Query: 411 GTNFTAAI 418
G +F A+
Sbjct: 363 GGSFIVAL 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 38/289 (13%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALES-AVVLDVQNIACGGRHAA 89
++GDV+IWG G G +N F P L + + + + CG +H A
Sbjct: 115 SVGDVYIWGRNL-QGQCGRSINYNQFMFA-------PHKLHTDSANKTFRQVDCGDQHTA 166
Query: 90 LVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSG 147
+V+ GE++++G+ S G+LG GV+ + V L+ +S I+ V+CG HT +T G
Sbjct: 167 VVSSTGELYTFGDNSEGQLGIGVEFKNTVDRAALVTGISEETIQ-VSCGYKHTLVLTNHG 225
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
++ G GT L G P R+ ++ V I G + A +TS +L +
Sbjct: 226 TVF--GMGTNKRYELASGTLQKSSQPIRIQ-TIDMFAVEKIIAGGFSVA-ITSQNELLVW 281
Query: 208 GDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA--AVVEVMVGNSSSSNCSS 265
G G FGV P+++ ++ +R V + + + A ++
Sbjct: 282 GSGDFGVF--------QSPQKI-FMEDVRFVDVSLSKSYDSFGAAID-----------DQ 321
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G ++TWG G+LG GD + +PT + L + ++ G S VAL
Sbjct: 322 GFVYTWGQNQFGQLGQGDFRLRKLPTKIPQLRKKKVRQLVAGGSFIVAL 370
>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
Length = 441
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 140/468 (29%), Positives = 204/468 (43%), Gaps = 108/468 (23%)
Query: 20 SSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKM-DSSLPKALESAVVLDV 78
+ G D + V+ WG GT DG LG K+ D LP+ L + +
Sbjct: 2 AEHGETQADEEEEEQVWSWGAGT-DGQLGT----------TKLQDELLPQLLSLTSLPSI 50
Query: 79 QNIACGGRHAA-----------------LVNKQ----------GEVFSWGEESGGRLGHG 111
+ACGG H LV Q G+VF+WG S G+LGHG
Sbjct: 51 SMLACGGAHVIALTSGKPPKISLIKGMLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHG 110
Query: 112 VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW 171
++ PKL+ + I A G H+ V+ SG ++T G+G+ FG LGHG+ +S
Sbjct: 111 DILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGS--FGQLGHGDTLSLS 168
Query: 172 VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH-GDR-KSVSIPREV 229
P +V+ V ++CG H+ V+ + Q+ FG G G LG DR KSV++P V
Sbjct: 169 TPAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVV 227
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
LK + VR + H+AA+ + G+ F+WG +G G D A
Sbjct: 228 SGLKDVEVVRISANGDHSAAI------------SADGQFFSWG---RGFCGGPDVHAP-- 270
Query: 290 PTCVAALVEP-NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKL 348
+L P +F VA G + + LT G V+ +GS + Q P+ + E
Sbjct: 271 ----QSLPSPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQ---PEKQQLQIDSSEALF 323
Query: 349 SK--SF----VEEIACGSYHVAVLTSKT----------------------------EVYT 374
K F V +IA G+ H A +T K EV T
Sbjct: 324 EKVPDFDGVKVMQIAAGAEHSAAVTGKRGGAILLFLSSLHSANIKQTTFECLAENGEVKT 383
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEA----LKDKQVKSIACGTNFTAAI 418
WG G +G+LG G+T+D+ SP LV L+ K++K + CG+ FT A+
Sbjct: 384 WGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 430
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 193/437 (44%), Gaps = 75/437 (17%)
Query: 57 CFGV-----KMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG 111
C GV K + P + + ++V +ACG H+ + G V+SWG G+LG G
Sbjct: 825 CLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTG 883
Query: 112 VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW 171
+P L+D+LSN I V+ G+YH+ A++ SG L+TWG G Y G LGHG
Sbjct: 884 RRGQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVY--GQLGHGAIDDCE 941
Query: 172 VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
PK + LE ++ S G H+ ++TS G++FTFG G+FG LG+G ++ P V
Sbjct: 942 KPKLLKS-LENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYG 1000
Query: 232 L-KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG------------------ 272
L + ++ + A +H A+ +V G+L+TWG
Sbjct: 1001 LPEPIKCIYTA--YFHNLALSDV------------GRLYTWGSSPQVLRFHAQSQKRARN 1046
Query: 273 -----------DGDKGRLGHGDKEAKLVPTCV-AALVEPNFCRVACGHSLTVALTTSGHV 320
D + L D L PT V + + + ++ CG + ++T+G +
Sbjct: 1047 QLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQL 1106
Query: 321 YTMGSPVYGQLGNPQADGKLPNRV-----------EGKLSKSFVEEIACGSYHVAVLTSK 369
YT G + GQLG +L V S S ++E+ CG+ L +
Sbjct: 1107 YTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAA 1166
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD- 428
+++ WG G+LG +D L + L D ++ I TN I H V+ +D
Sbjct: 1167 NKLWGWGSNHEGQLGKIPEED-----LAKTLLDGKMVMIK-STNKVIKI-QHGTVNKLDS 1219
Query: 429 --QSMCSGCRLPFNNFK 443
+ + R F+N K
Sbjct: 1220 PIEILLPQLRFSFSNIK 1236
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 134/303 (44%), Gaps = 39/303 (12%)
Query: 149 LYTWGDGTYNFGLLGHG---------NEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
LYTWG +Y G LG G N VS +V RV V ++CG H+ +T
Sbjct: 815 LYTWGHSSY--GCLGVGPHMTKTATPNPVSWFVYIRV-------EVIQVACGRNHSIALT 865
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G ++++G +G LG G R P V+SL V + G +H+ A+
Sbjct: 866 TNG-VYSWGSNHYGQLGTGRRGQAPYPMLVDSLSNELIVSVSAGQYHSLAI--------- 915
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
+SG+L+TWG G G+LGHG + P + +L N G+S ++ LT++G
Sbjct: 916 ---SASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGK 972
Query: 320 VYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
V+T GS +GQLGN + K+ + V ++ I +H L+ +YTWG
Sbjct: 973 VFTFGSGSFGQLGN-GSTTKITSPVPVYGLPEPIKCIYTAYFHNLALSDVGRLYTWGSSP 1031
Query: 380 NGRLGHGDTDDRNSPSLV----EALKDKQVKSIACG---TNFTAAICLHKWVSGVDQSMC 432
H + R LV + D ++ ++ + + + +SG MC
Sbjct: 1032 QVLRFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMC 1091
Query: 433 SGC 435
GC
Sbjct: 1092 CGC 1094
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G + +++ + KL+TWG G LG H K A P + +VACG + ++
Sbjct: 803 GWAHAAHIRNHKLYTWGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSI 862
Query: 313 ALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
ALTT+G VY+ GS YGQLG + P V+ LS + ++ G YH +++ +
Sbjct: 863 ALTTNG-VYSWGSNHYGQLGTGRRGQAPYPMLVDS-LSNELIVSVSAGQYHSLAISASGQ 920
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
++TWG G G+LGHG DD P L+++L+++ + S
Sbjct: 921 LWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENIIS 956
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 57/317 (17%)
Query: 4 MAMDAFRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKM 62
M +D+ L +VS+ G H A G ++ WG G + G ++
Sbjct: 892 MLVDSLSNELIVSVSA---GQYHSLAISASGQLWTWGWGVYGQLGHGAID---------- 938
Query: 63 DSSLPKALESAVVLDVQNI--ACGGR-HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
D PK L+S L+ +NI A GG H+ ++ G+VF++G S G+LG+G + + P
Sbjct: 939 DCEKPKLLKS---LENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSP 995
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG-------------TYNFGLLGHGN 166
+ L I+ + +H A++ G LYTWG N +L G+
Sbjct: 996 VPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGD 1054
Query: 167 E--------------VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG---D 209
+ + H P V+ + + CG H+AV+++ GQL+T+G D
Sbjct: 1055 QADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTTGQLYTWGLNLD 1114
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG-NSSSSNCSSGKL 268
G GV G +R ++ +L G +V + + EV G + + + ++ KL
Sbjct: 1115 GQLGVSGIRERLVPTV-----TLVGPPSVIVDSSSTSGSLIKEVRCGADFTLALDAANKL 1169
Query: 269 FTWGDGDKGRLGHGDKE 285
+ WG +G+LG +E
Sbjct: 1170 WGWGSNHEGQLGKIPEE 1186
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 154/342 (45%), Gaps = 25/342 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V NIA G H V K G +SWG + G+LG G + L P L+ L+ + ++ G
Sbjct: 297 VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLT--GVRALSGGV 354
Query: 138 YHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G + WG YN G LG+G + +P +V + + I G +HT
Sbjct: 355 VHTVALKWDGTAWGWG---YNSAGQLGNGTTTNSSIPVQVAALTQAVE---IDAGGYHTL 408
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
G L+ +GD +G LG G+ S S+P +V L G+R W A +
Sbjct: 409 ARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-LSGVR--------WFGAGYYYSVAE 459
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
+ LF WG G LG G + PT A+V + A G + +VAL
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPT---AVVVSGIVKTAGGSAHSVALGA 516
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+T G YGQLGN + +S V ++A G H L++ V WG
Sbjct: 517 GGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSG--VIDVAAGVNHTVALSADGTVAAWG 574
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
A G+LG+G T ++ +P V L V +I+ G+ T A+
Sbjct: 575 YNAYGQLGNGTTANQLTPQSVPELDG--VTAISAGSTHTVAL 614
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 180/393 (45%), Gaps = 47/393 (11%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+F WG T +G LG G + P A+ VV + A G H+ +
Sbjct: 471 LFAWGHNT-NGELGDG---------TTTQRTSPTAV---VVSGIVKTAGGSAHSVALGAG 517
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V++WG + G+LG+G + V+ P + +S + I+ VA G HT A++ G + WG
Sbjct: 518 GAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSGV-ID-VAAGVNHTVALSADGTVAAWG- 574
Query: 155 GTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
YN +G LG+G + P+ V L+G V++IS G HT + + G ++ +G +G
Sbjct: 575 --YNAYGQLGNGTTANQLTPQSVP-ELDG--VTAISAGSTHTVALKADGTVWAWGSNLYG 629
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G S P +V SL+ V A G +HT AV G L+ WG
Sbjct: 630 QLGDGTFTHRSSPVQVPSLE--NVVSIAAGHFHTVAV------------KGDGTLWVWGY 675
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G +G+LG G + VP V+ L + +A G TVAL +G V+T G GQLG
Sbjct: 676 GPQGQLGLGTTTNQSVPVQVSGL--GHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG- 732
Query: 334 PQADGKLPNRVEGKLSKSF--VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
D + R L V +A G Y AVL V+ +G NG+LG G T R
Sbjct: 733 ---DATIIQRYSPVLVPGLTNVIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSR 789
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+SP+ A V ++ G N + WV
Sbjct: 790 SSPT---ATLMNSVVDLSSGVNHMMGLRKDAWV 819
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 145/325 (44%), Gaps = 30/325 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++A G H ++ G V +WG + G+LG+G ++ L P+ + L + ++ G
Sbjct: 551 VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDG--VTAISAGS 608
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT A+ G ++ WG Y G LG G P +V LE +V SI+ G +HT
Sbjct: 609 THTVALKADGTVWAWGSNLY--GQLGDGTFTHRSSPVQVP-SLE--NVVSIAAGHFHTVA 663
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
V G L+ +G G G LG G + S+P +V L V A G +HT A++
Sbjct: 664 VKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG--HAVAIAAGGYHTVALL------ 715
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
++G+++TWG G+LG + P V L N +A G T L
Sbjct: 716 ------ANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLT--NVIALAAGGYTTAVLKRD 767
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVE--GKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G V+ G GQLG DG +R L S V+ ++ G H+ L V
Sbjct: 768 GTVWAFGYNPNGQLG----DGTTTSRSSPTATLMNSVVD-LSSGVNHMMGLRKDAWVRAC 822
Query: 376 GKGANGRLGHGDTDDRNSPSLVEAL 400
G + G+LG G T R +P V L
Sbjct: 823 GYNSAGQLGDGTTTQRPTPVQVTNL 847
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 141/319 (44%), Gaps = 27/319 (8%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+++ G H V G +++WG G+LG+G + P + L+ + + G H
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEH 206
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
+ AVT G ++TWG Y G LG G VP +V G + + V++ T +
Sbjct: 207 SVAVTEDGSVWTWGSNAY--GQLGDGTNTLRAVPVQVPGMSDVVAVAAAGS---RTVALK 261
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G ++T+G + G LG G +P +V +L G+ + A G+WHT AV +
Sbjct: 262 ADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNI--AAGLWHTLAVKK------- 312
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGH 319
G ++WG+ G+LG G +L P VA L H TVAL G
Sbjct: 313 -----DGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVH--TVALKWDGT 365
Query: 320 VYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
+ G GQLGN + +P +V L+++ EI G YH +Y WG
Sbjct: 366 AWGWGYNSAGQLGNGTTTNSSIPVQVA-ALTQAV--EIDAGGYHTLARRQDGTLYAWGDN 422
Query: 379 ANGRLGHGDTDDRNSPSLV 397
G LG G+T + P V
Sbjct: 423 FYGALGTGNTTSSSVPVQV 441
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 140/327 (42%), Gaps = 32/327 (9%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
V + + G H+ V + G V++WG + G+LG G ++ P + +S ++ VA
Sbjct: 196 QVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMS--DVVAVAAA 253
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
T A+ G ++TW G + G LG G +P +V L G V++I+ G WHT
Sbjct: 254 GSRTVALKADGTVWTW--GINSSGELGDGTTTHSLLPIQVPN-LSG--VTNIAAGLWHTL 308
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
V G +++G+ +G LG G + P V L G+R + GV HT A+
Sbjct: 309 AVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSG--GVVHTVALKW---- 362
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G + WG G+LG+G +P VAAL + + G T+A
Sbjct: 363 --------DGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQA--VEIDAGGYHTLARRQ 412
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE----- 371
G +Y G YG LG + V ++ S V G Y+ K
Sbjct: 413 DGTLYAWGDNFYGALGTGN---TTSSSVPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVH 469
Query: 372 -VYTWGKGANGRLGHGDTDDRNSPSLV 397
++ WG NG LG G T R SP+ V
Sbjct: 470 TLFAWGHNTNGELGDGTTTQRTSPTAV 496
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 142/331 (42%), Gaps = 46/331 (13%)
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSN-----MNIEL----------V 133
V +QGE F E+ LG GV S V+ P +ID+ N + E+ V
Sbjct: 93 VGEQGEWFF--SEAAAGLGCGVHSFVVKASPMIIDSNGNRAKCGITREVLRNFVQFCPSV 150
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+ G YHT V G L+ WG+ G LG+G P RV G + V S S G
Sbjct: 151 SPGVYHTLEVKSGGSLWAWGNNPS--GQLGNGQRTQRNAPTRVRGLNQ---VVSASAGAE 205
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+ VT G ++T+G +G LG G ++P +V + + V AA
Sbjct: 206 HSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAA------------ 253
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
G+ + + + G ++TWG G LG G L+P V L +A G T+A
Sbjct: 254 --GSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNL--SGVTNIAAGLWHTLA 309
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF--VEEIACGSYHVAVLTSKTE 371
+ G ++ G+ YGQLG DG NR+ L V ++ G H L
Sbjct: 310 VKKDGSAWSWGNNAYGQLG----DGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGT 365
Query: 372 VYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
+ WG + G+LG+G T + + P V AL
Sbjct: 366 AWGWGYNSAGQLGNGTTTNSSIPVQVAALTQ 396
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 301 FC-RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIAC 358
FC V+ G T+ + + G ++ G+ GQLGN Q + P RV G L++ V +
Sbjct: 146 FCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRG-LNQ--VVSASA 202
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+ H +T V+TWG A G+LG G R P V + D V ++A + T A+
Sbjct: 203 GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD--VVAVAAAGSRTVAL 260
Query: 419 CLHK--WVSGVDQS 430
W G++ S
Sbjct: 261 KADGTVWTWGINSS 274
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 157/386 (40%), Gaps = 27/386 (6%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+ WGE G G LG G +DSS P A+ V +A G RH +
Sbjct: 56 ILAWGENDG-GQLGNG---------TMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSA 105
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V +WG G+LG+G + P + + VA G H+ A+T +G + WGD
Sbjct: 106 GTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGD 165
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG-QLFTFGDGTFG 213
T FG LG G+ P V+ P G V++I+ G H V+TS G L T+G T G
Sbjct: 166 NT--FGQLGDGSTTDRSTPVAVSLP-AGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRG 222
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG G P V G+ A G H+ + S WG
Sbjct: 223 QLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVL------------TSDDTALAWGG 270
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G+LG+G LVP VA +A G + ALT+ G + G GQLGN
Sbjct: 271 NSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGN 330
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
D P V S H +TS WG ANG LG G T DR+
Sbjct: 331 GSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRS 390
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
+P V +V +IA G + + A+
Sbjct: 391 TPVAVSLPAGTRVAAIAAGDDQSMAL 416
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 131/351 (37%), Gaps = 58/351 (16%)
Query: 11 VSLSSAVSSSSQGSGHDDGDAL---GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLP 67
VSL + + ++ G G AL G V WG +G LG G SS P
Sbjct: 81 VSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNI-EGQLGNG---------STTSSSTP 130
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
A+ +A G H+ + G + +WG+ + G+LG G +D P + +
Sbjct: 131 VAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAG 190
Query: 128 MNIELVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ +A G H +T +G L TWG T G LG G P V P G+ V+
Sbjct: 191 TTVAAIAAGRDHNLVLTSTGPTLLTWGKNTR--GQLGDGTTTGRDTPVAVTLP-PGVTVT 247
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
S++ G H+ V+TS +G +FG LG+G +P V G A G H
Sbjct: 248 SVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEATAIAAGRLH 307
Query: 247 TAAVVEV------------MVGNSSSSN-----------------------------CSS 265
+AA+ +GN S+++ S+
Sbjct: 308 SAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSA 367
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G WG G LG G + P V+ +A G ++AL T
Sbjct: 368 GAALAWGANANGELGDGSTTDRSTPVAVSLPAGTRVAAIAAGDDQSMALPT 418
>gi|302854088|ref|XP_002958555.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
nagariensis]
gi|300256130|gb|EFJ40404.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
nagariensis]
Length = 201
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 7/186 (3%)
Query: 72 SAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIE 131
A+ +DV +AC RHAAL+ + GE+++WG G LGHG DV P+L+ + +
Sbjct: 5 EAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGVR 64
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP--LEGIHVSSIS 189
VACGE + A++ L+ WG G G LG+G P V P + + V ++S
Sbjct: 65 AVACGEGASAAISAEQRLFMWGKGI--AGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAVS 122
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES---LKGLRTVRAACGVWH 246
CGP+HTA +T G L+T+G+G FG LGHG ++ PR L+ + +CG WH
Sbjct: 123 CGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWH 182
Query: 247 TAAVVE 252
TAAV
Sbjct: 183 TAAVAR 188
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 23/175 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+++ WG G DG LG G D P+ L V+ +ACG +A ++
Sbjct: 28 GELYTWGVGK-DGNLG---------HGWCGDVPKPRLLTRMGGRGVRAVACGEGASAAIS 77
Query: 93 KQGEVFSWGEESGGRLGHGV------DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
+ +F WG+ G+LG+G + V+ P L D ++ + V+CG YHT A+T
Sbjct: 78 AEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRD---DVKVLAVSCGPYHTAAITEG 134
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG--PLEGIHVSSISCGPWHTAVVT 199
G LYTWG+G FG LGHG + + P+R G PLE +V ++SCG WHTA V
Sbjct: 135 GLLYTWGNGL--FGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWHTAAVA 187
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-A 241
+ VS ++C P H A++T G+L+T+G G G LGHG V PR + + G R VRA A
Sbjct: 9 VDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGG-RGVRAVA 67
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEP 299
CG +AA+ + +LF WG G G+LG+G A+ P L +
Sbjct: 68 CGEGASAAI------------SAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDD 115
Query: 300 -NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGK--LSKSFVEE 355
V+CG T A+T G +YT G+ ++G+LG+ Q D P R G L +V
Sbjct: 116 VKVLAVSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVIN 175
Query: 356 IACGSYHVAVLT 367
++CG +H A +
Sbjct: 176 VSCGYWHTAAVA 187
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
R AC H A + +G+L+TWG G G LGHG P + +
Sbjct: 13 RVACAPRHAALITR------------NGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGG 60
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----PQADGKLPNRVEGKLSKSFVE 354
VACG + A++ ++ G + GQLGN P A+ P G V
Sbjct: 61 RGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAE-PAPVIFPGLRDDVKVL 119
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA---LKDKQVKSIACG 411
++CG YH A +T +YTWG G GRLGHG D P L+DK V +++CG
Sbjct: 120 AVSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCG 179
Query: 412 TNFTAAI 418
TAA+
Sbjct: 180 YWHTAAV 186
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 103/211 (48%), Gaps = 33/211 (15%)
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW---VPK-RV 176
L+ ++++ VAC H +T +G+LYTWG G G LGHG W VPK R+
Sbjct: 2 LVGEAISVDVSRVACAPRHAALITRNGELYTWGVG--KDGNLGHG-----WCGDVPKPRL 54
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
+ G V +++CG +A +++ +LF +G G G LG+G + P V GLR
Sbjct: 55 LTRMGGRGVRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPV-IFPGLR 113
Query: 237 ----TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+ +CG +HTAA+ E G L+TWG+G GRLGHG + + P
Sbjct: 114 DDVKVLAVSCGPYHTAAITE------------GGLLYTWGNGLFGRLGHGTQRDEYRPRR 161
Query: 293 VAA---LVEPNFCRVACG--HSLTVALTTSG 318
A L + V+CG H+ VA SG
Sbjct: 162 CAGSFPLEDKYVINVSCGYWHTAAVARPRSG 192
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
V +AC H A++T E+YTWG G +G LGHG D P L+ + + V+++ACG
Sbjct: 11 VSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGVRAVACGE 70
Query: 413 NFTAAIC----LHKWVSGVDQSMCSGCRLP 438
+AAI L W G+ + +G P
Sbjct: 71 GASAAISAEQRLFMWGKGIAGQLGNGYAFP 100
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
V + + RVAC +T +G +YT G G LG+ R+ ++
Sbjct: 3 VGEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRG 62
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD--RNSPSLVEALKDK-QVKSIA 409
V +ACG A ++++ ++ WGKG G+LG+G +P + L+D +V +++
Sbjct: 63 VRAVACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAVS 122
Query: 410 CGTNFTAAI----CLHKWVSGV 427
CG TAAI L+ W +G+
Sbjct: 123 CGPYHTAAITEGGLLYTWGNGL 144
>gi|405964700|gb|EKC30153.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
Length = 774
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 153/337 (45%), Gaps = 40/337 (11%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
VF WG GV S V KL S+ + V+ G AVT +G L+ W
Sbjct: 314 VFFWG--------IGVSSPV---KLPLPSSDTQVTQVSTGRTQKAAVTKNGRLFVWESSN 362
Query: 157 YNFGLLGHGNEVSH---WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
L G SH +VP+ + G G+++ ++CG TA +T G L TFG G +G
Sbjct: 363 VGTDTLIPGATESHTLTYVPRYLEGQ-SGVNIQQVACGDLFTACLTDRGILMTFGSGVYG 421
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG+ V+ + VE L G V+ +CG H AV + ++F+WG
Sbjct: 422 CLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVT------------NEHEVFSWGR 469
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
GD GRLG GD+E+ P V V CG ++ LT + GS Y +L
Sbjct: 470 GDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTLDNKLLCCGSNRYNKLAL 529
Query: 334 P--QADG---KLPNRVEGKLSKS-------FVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
DG KL + + + + V+ +A G+ H A +T + + YT+G G
Sbjct: 530 DVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFG 589
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+LG+ T++ P V+ + ++V +ACG FT +
Sbjct: 590 QLGN-QTNNSRQPQEVKIAQTQKVAMVACGDTFTVIV 625
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 116/394 (29%), Positives = 172/394 (43%), Gaps = 38/394 (9%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A A R LS+ S + + + AL VF WG G V S + + S
Sbjct: 284 ATAAARSRLSTRGSMTPRDALSAKPPALSSVFFWGIG------------VSSPVKLPLPS 331
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR---LGHGVDSDVLH--P 119
S + V ++ G A V K G +F W + G + +S L P
Sbjct: 332 SDTQ---------VTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVP 382
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ ++ S +NI+ VACG+ T +T G L T+G G Y G LGHGN + ++
Sbjct: 383 RYLEGQSGVNIQQVACGDLFTACLTDRGILMTFGSGVY--GCLGHGN-YNDVAQAKIVED 439
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L G V +SCG H VT+ ++F++G G G LG GD++S S PR V + LR
Sbjct: 440 LLGYEVVQVSCGASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSS 499
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
CGV + ++ ++ C S + G K + T V P
Sbjct: 500 VHCGVDCSM----ILTLDNKLLCCGSNRYNKLALDVIATDGTCMKLVDEIHTFVQTASHP 555
Query: 300 --NFCR--VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE 355
N VA G S T A+T G YT G+ +GQLGN + + P V+ ++ V
Sbjct: 556 IGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSRQPQEVKIAQTQK-VAM 614
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
+ACG ++ + EVY++G + GRLG + D
Sbjct: 615 VACGDTFTVIVADEGEVYSFGNQSRGRLGRPEED 648
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 28/293 (9%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
+ +P+ LE +++Q +ACG A + +G + ++G G LGHG +DV K+++
Sbjct: 379 TYVPRYLEGQSGVNIQQVACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVE 438
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
L + V+CG H AVT ++++WG G + G LG G++ SH P+ V P E +
Sbjct: 439 DLLGYEVVQVSCGASHVLAVTNEHEVFSWGRG--DNGRLGLGDQESHSSPRPVVIP-EPL 495
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG----HGDRKSVSIPREVES-------- 231
SS+ CG + ++T +L G + L D + + E+ +
Sbjct: 496 RPSSVHCGVDCSMILTLDNKLLCCGSNRYNKLALDVIATDGTCMKLVDEIHTFVQTASHP 555
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
+ L A G HTAAV G+ +T+G G+LG+ ++ P
Sbjct: 556 IGNLLVKGVAMGTSHTAAVT------------VEGQCYTFGTNQFGQLGNQTNNSRQ-PQ 602
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
V VACG + TV + G VY+ G+ G+LG P+ D P +V
Sbjct: 603 EVKIAQTQKVAMVACGDTFTVIVADEGEVYSFGNQSRGRLGRPEEDPTEPGKV 655
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 27/265 (10%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D + K +E + +V ++CG H V + EVFSWG GRLG G P+ +
Sbjct: 430 DVAQAKIVEDLLGYEVVQVSCGASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPV 489
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN-FGL---------LGHGNEVSHWV 172
+ V CG + +TL L G YN L + +E+ +V
Sbjct: 490 VIPEPLRPSSVHCGVDCSMILTLDNKLLCCGSNRYNKLALDVIATDGTCMKLVDEIHTFV 549
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
+ + P+ + V ++ G HTA VT GQ +TFG FG LG+ S P+EV+
Sbjct: 550 -QTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSRQ-PQEVKIA 607
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+ + ACG T V + G+++++G+ +GRLG +++ P
Sbjct: 608 QTQKVAMVACGDTFTVIVAD------------EGEVYSFGNQSRGRLGRPEEDPT-EPGK 654
Query: 293 VAALVEPNFCRV--ACGHSLTVALT 315
V + E F V +C H T+ T
Sbjct: 655 VPFMGEDPFVVVSLSCSHGNTLLAT 679
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 250 VVEVMVGNSSSSNCS-SGKLFTWGDGDKGR--LGHGDKEA---KLVPTCVAALVEPNFCR 303
V +V G + + + +G+LF W + G L G E+ VP + N +
Sbjct: 336 VTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQSGVNIQQ 395
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
VACG T LT G + T GS VYG LG+ + ++ L V +++CG+ HV
Sbjct: 396 VACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHV 455
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+T++ EV++WG+G NGRLG GD + +SP V + + S+ CG + + + L
Sbjct: 456 LAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTL 512
>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
Length = 566
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G V + EVF G G LG G + PK +D+L I AC Y H
Sbjct: 70 AGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKI---ACLSYGSGPH 126
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G++YTWG Y+ LG+G VP +V+ L V ++CG H+ V+T
Sbjct: 127 VVLATEEGEVYTWGHNAYS--QLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLT 184
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G+++T+G G +G G + IPR V S L+ V ACG + AVVE
Sbjct: 185 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE------ 238
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G + P +AAL RVACG + T+ LT G
Sbjct: 239 ------NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEG 292
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTW 375
+Y G+ YGQLG +++ P V + K V EI AC S H A T +VY W
Sbjct: 293 QIYAWGANSYGQLGTGNKSNQSYPTTV--TVDKDRVVEIAACHSAHTSAAKTQSGQVYMW 350
Query: 376 GK 377
G+
Sbjct: 351 GQ 352
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 144/293 (49%), Gaps = 32/293 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D V G+N G C G + S++ PK L+S L + IAC G H L ++GEV
Sbjct: 81 DEVFVLGMNCSG-CLGTGDIQSTIEPKRLDS---LCGKKIACLSYGSGPHVVLATEEGEV 136
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++WG + +LG+G + L P + L N + VACG +H+ +T G++YTWG
Sbjct: 137 YTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN- 195
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV L+ V +I+CG + V G+++ +G G LG
Sbjct: 196 -NSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 254
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 255 LGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD------------EGQIYAWGANSY 302
Query: 277 GRLGHGDKEAKLVPTCVAA----LVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+LG G+K + PT V +VE C A H+ + A T SG VY G
Sbjct: 303 GQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSA--HT-SAAKTQSGQVYMWGQ 352
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG G+ S PKR++ L G ++ +S G H + T G+++T+G + LG+G
Sbjct: 92 GCLGTGDIQSTIEPKRLDS-LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 150
Query: 219 DRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
+P +V + L + + ACG H+ + S G+++TWG + G
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLT------------SDGEVYTWGYNNSG 198
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
++G G + +P V + ++ +ACG ++A+ +G VY G GQLG
Sbjct: 199 QVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSS 258
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
+ P R+ L V+ +ACG H VLT + ++Y WG + G+LG G+ +++ P+
Sbjct: 259 GNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 317
Query: 396 LVEALKDKQVKSIACGTNFTAA 417
V KD+ V+ AC + T+A
Sbjct: 318 TVTVDKDRVVEIAACHSAHTSA 339
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
VT ++F G G LG GD +S P+ ++SL G + AC + + V +
Sbjct: 77 VTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKI---ACLSYGSGPHVVLAT-- 131
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTT 316
G+++TWG +LG+G LVP V+ LV VACG ++ LT+
Sbjct: 132 ------EEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTS 185
Query: 317 SGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G GQ+G+ A+ +P RV L V IACG + EVY W
Sbjct: 186 DGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVW 245
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G NG+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 246 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVL 288
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+V+ WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 187 GEVYTWGYNNS--------GQVGS--GSTANQPIPRRVTSCLQNKVVV---NIACGQMCS 233
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V + GEV+ WG G+LG G + P I AL + ++ VACG HT +T G
Sbjct: 234 MAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ 293
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + + V +C HT A T +GQ++ +
Sbjct: 294 IYAWGANSY--GQLGTGNKSNQSYPTTVTVDKDRV-VEIAACHSAHTSAAKTQSGQVYMW 350
Query: 208 GD--GTFGVLGH 217
G G VL H
Sbjct: 351 GQCRGQSVVLPH 362
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 159/321 (49%), Gaps = 23/321 (7%)
Query: 97 VFSWGEESGGRLGHG-VDSD-VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
+ WG S G+LG G +D + V+ P+ + + V CG HT + G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGC 60
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ G LGH E S P+ V L+ + ++SCG HT + GQ+F++G G+ G
Sbjct: 61 N--DLGQLGH--EKSRKKPEHVVA-LDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQ 115
Query: 215 LGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG + + V +PR ++ L ++ + ACG WH+ A+ G++F+WG
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL------------SKGGQVFSWGQ 163
Query: 274 GDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
G+LG G + + P + +L F +++ G + + A+T SG V+ G +GQLG
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLG 223
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
N D P ++ S+ + ++CG H A LT V+T+G G G+LGH T+
Sbjct: 224 LNDTKDRWFPALLKSLRSQRVIF-VSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHE 282
Query: 392 NSPSLVEALKDKQVKSIACGT 412
+P V L V I+CG+
Sbjct: 283 INPRKVFELMGNVVTQISCGS 303
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 145/285 (50%), Gaps = 19/285 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++ CG +H + G V++ G G+LGH + P+ + AL I V+CGE
Sbjct: 36 VCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKSRKKPEHVVALDAQIIVAVSCGE 93
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
HT A+ G +++WG G+ G LG N E VP+ + L + ++ ++CG WH+
Sbjct: 94 SHTLALNDKGQVFSWGLGSN--GQLGLNNFEECVRVPRNIKC-LSDVQIAQVACGYWHSH 150
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ GQ+F++G FG LG G S+S P+ ++SL+G+ + + G H+ A+
Sbjct: 151 ALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT---- 206
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
SG +F WG G+LG D + + P + +L V+CG T ALT
Sbjct: 207 --------LSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALT 258
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGS 360
V+T G+ YGQLG+ + ++ R +L + V +I+CGS
Sbjct: 259 KLRGVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCGS 303
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 128/245 (52%), Gaps = 20/245 (8%)
Query: 68 KALESAVVLDVQNI---ACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKLID 123
K E V LD Q I +CG H +N +G+VFSWG S G+LG + + V P+ I
Sbjct: 73 KKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIK 132
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
LS++ I VACG +H+ A++ G +++WG + GL HG+ +S P+ + L+G
Sbjct: 133 CLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQS-LQG 189
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
I + +S G H+ +T +G +F +G FG LG D K P ++SL+ R + +C
Sbjct: 190 IPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSC 249
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G HTAA+ ++ +FT+G G G+LGH ++ P V L+
Sbjct: 250 GEDHTAALTKLR------------GVFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVT 297
Query: 303 RVACG 307
+++CG
Sbjct: 298 QISCG 302
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 152 WGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG+ +Y GL G E+ V R G V + CG HT + G ++T G
Sbjct: 4 WGNASYGQLGLGGIDEEIV--VEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCN 61
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LGH KS P V +L V +CG HT A+ + G++F+
Sbjct: 62 DLGQLGH--EKSRKKPEHVVALDAQIIVAVSCGESHTLALND------------KGQVFS 107
Query: 271 WGDGDKGRLGHGD-KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG G G+LG + +E VP + L + +VACG+ + AL+ G V++ G +G
Sbjct: 108 WGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFG 167
Query: 330 QLGNPQADGKL--PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
QLG + P ++ F + ++ G H +T V+ WGK G+LG D
Sbjct: 168 QLGLGMHGSSISTPQIIQSLQGIPFAQ-LSAGGAHSFAITLSGAVFGWGKNKFGQLGLND 226
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
T DR P+L+++L+ ++V ++CG + TAA+
Sbjct: 227 TKDRWFPALLKSLRSQRVIFVSCGEDHTAAL 257
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG+ G LG G++ GS S P+ ++S + ++ GG H+ +
Sbjct: 156 GQVFSWGQNQF-GQLGLGMH--GSSI------STPQIIQSLQGIPFAQLSAGGAHSFAIT 206
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G VF WG+ G+LG D P L+ +L + + V+CGE HT A+T ++T+
Sbjct: 207 LSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTF 266
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
G G Y G LGH N +H + R L G V+ ISCG
Sbjct: 267 GAGGY--GQLGH-NCTNHEINPRKVFELMGNVVTQISCG 302
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/415 (28%), Positives = 181/415 (43%), Gaps = 59/415 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+ WG G DG LG G N K + + +ALE V+++ G R++ +
Sbjct: 7 IIAWGSGE-DGQLGIGTNEE------KEWACVVEALEP---YSVRSVVSGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F+WG G LGH ++ + P + AL+N+ I A G +H AV G Y WG
Sbjct: 57 GTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 154 DGTYNF-------GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
Y +G +PKR L V ++ G H+ V+T G ++T
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT---VRQVAAGGTHSVVLTREGHVWT 173
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G GD K +S+P V+ L+ +R + A G +H A+ E G
Sbjct: 174 WGQ----PWPPGDIKQISVPVRVQGLENVRLI--AVGAFHNLALEE------------DG 215
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+L WG+ + G+LG GD + P V L + +A G + ALT G VY G
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRG 275
Query: 327 VYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+G+LG N ++ +P +V L++ + +++CG H LT ++++G+G +GRL
Sbjct: 276 EHGRLGLGDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRL 334
Query: 384 GHGDTDDRNSPSLV----------------EALKDKQVKSIACGTNFTAAICLHK 422
G+G P + E KSIACG T AI K
Sbjct: 335 GYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWK 389
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 159/336 (47%), Gaps = 51/336 (15%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR---------LGHGVDS 114
++P +++ + + A GG H V+ QG ++WG G+ +G V
Sbjct: 79 ENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRR 138
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D++ PK + + VA G H+ +T G ++TWG + G + ++S VP
Sbjct: 139 DIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ-PWPPGDI---KQIS--VPV 190
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
RV G LE + + I+ G +H + G+L +G+ +G LG GD + S P V+ L
Sbjct: 191 RVQG-LENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDD 247
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
L V A G WH+ A+ + G+++ WG G+ GRLG GD K +K+VP
Sbjct: 248 LTLVDIAAGGWHSTALTD------------KGEVYGWGRGEHGRLGLGDNDKSSKMVPQK 295
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----------------PQA 336
V L E + +V+CG + +VALT G +++ G +G+LG P
Sbjct: 296 VNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPP 355
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTE 371
+G + E + K + IACG H +A++ K++
Sbjct: 356 EGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSD 391
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G N K +P+ + D+ ++CGG H+ +
Sbjct: 267 GEVYGWGRGE-HGRLGLGDND-------KSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318
Query: 93 KQGEVFSWGEESGGRLGHG 111
+ G +FS+G GRLG+G
Sbjct: 319 RDGRIFSFGRGDHGRLGYG 337
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ + T + WG G +G+LG G +++ +VEAL+ V+S+ G+ + AIC
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAIC 54
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 165/354 (46%), Gaps = 31/354 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ +I+CG ++ + G V+ WG+ + G+LG G +D + L + +ACG
Sbjct: 327 IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGV 384
Query: 138 YHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIH-VSSISCGPWHT 195
H+ A+ G ++TWG +N FG LG G +VS K P+ G+ + +I+CG H+
Sbjct: 385 NHSMALRNDGTVWTWG---FNAFGQLGDGTKVS----KNTAVPISGLDGIIAITCGTSHS 437
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+ G ++ +GD +G LG+G S + P +V +L G++++ CG
Sbjct: 438 MALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSIF--CGY----------- 484
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
++S + G ++ WG+ + G LG G + PT + + + H L AL
Sbjct: 485 -STSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLNIGDIKAISIGSSHCL--ALK 541
Query: 316 TSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
G V+ G YGQLG+ K LP +V G S + I+ G H L S V+
Sbjct: 542 NDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSG---ISGITAISAGGSHSLALKSDGTVWA 598
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVD 428
WG+ G+LG G +DRN+P V L V S +F WV G D
Sbjct: 599 WGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALKNDGTVWVWGSD 652
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 160/342 (46%), Gaps = 29/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V +I+ G ++ + G V++WGE G+LG G + L P + LS I ++ G
Sbjct: 227 VSSISAGKYYSMALKSDGTVWTWGENDYGQLGDGTTATRLSPVQVQNLS--GIIAISSGN 284
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ A+ G ++ WGD G LG G S ++P +V G L GI SISCG +++
Sbjct: 285 SHSLALKDDGTVWAWGDN--ESGQLGDGTTNSKYIPSQVQG-LSGI--VSISCGFYYSMA 339
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ + G ++ +GD T G LG G + V L G+ + ACGV H+ A+
Sbjct: 340 LKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGV--IAIACGVNHSMAL------- 390
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+ G ++TWG G+LG G K +K ++ L + CG S ++AL
Sbjct: 391 -----RNDGTVWTWGFNAFGQLGDGTKVSKNTAVPISGL--DGIIAITCGTSHSMALKDD 443
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK-SFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G YGQLGN + N ++S S ++ I CG L V+ WG
Sbjct: 444 GTVWAWGDNQYGQLGNGTF---ISNTTPSQVSNLSGIKSIFCGYSTSFALKPDGTVWAWG 500
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G LG G T P+ E L +K+I+ G++ A+
Sbjct: 501 NNEYGELGKGFTTRVIYPT--ETLNIGDIKAISIGSSHCLAL 540
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 157/338 (46%), Gaps = 27/338 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++ G H + G V++ GE G+LG+ D+ P ++ L+ + ++ G+Y++
Sbjct: 180 VSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGKYYS 237
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+ G ++TWG+ Y G LG G + P +V L GI +IS G H+ +
Sbjct: 238 MALKSDGTVWTWGENDY--GQLGDGTTATRLSPVQVQN-LSGII--AISSGNSHSLALKD 292
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G ++ +GD G LG G S IP +V+ L G+ V +CG +++ A+
Sbjct: 293 DGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGI--VSISCGFYYSMAL---------- 340
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+ G ++ WGD G+LG G + V+ L +ACG + ++AL G V
Sbjct: 341 --KNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL--DGVIAIACGVNHSMALRNDGTV 396
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+T G +GQLG+ K N + I CG+ H L V+ WG
Sbjct: 397 WTWGFNAFGQLGDGTKVSK--NTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQY 454
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG+G +PS V L +KSI CG + + A+
Sbjct: 455 GQLGNGTFISNTTPSQVSNLSG--IKSIFCGYSTSFAL 490
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 37/341 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I CG H+ + G V++WG+ G+LG+G P + LS I+ + CG +
Sbjct: 430 ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCGYSTS 487
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV---SSISCGPWHTAV 197
A+ G ++ WG+ Y G LG G RV P E +++ +IS G H
Sbjct: 488 FALKPDGTVWAWGNNEY--GELGKG------FTTRVIYPTETLNIGDIKAISIGSSHCLA 539
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ + G ++ +GD +G LG G S+P +V + G+ + A G+
Sbjct: 540 LKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGITAISAG--------------GS 585
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
S + S G ++ WG + G+LG G KE + P V+ L S AL
Sbjct: 586 HSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSF--ALKND 643
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
G V+ GS Y P +P ++ G S + I CG+YH L + V+ WGK
Sbjct: 644 GTVWVWGSDSYNL---PLEKMTMPIQISGL---SGIIAIECGTYHNLALKNDGTVWAWGK 697
Query: 378 GANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+ G G T N P V L VK+IA G N + A+
Sbjct: 698 NNFGQFGDGTTTTTNIPVQVSGLSG--VKAIAVGGNRSIAL 736
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 122/245 (49%), Gaps = 27/245 (11%)
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
++ GP + +S G HT + S G ++ G+ +G LG+ + ++ P VE L
Sbjct: 172 KIEGP-----IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNK 226
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
+ ++ A G +++ A+ S G ++TWG+ D G+LG G +L P V
Sbjct: 227 VSSISA--GKYYSMAL------------KSDGTVWTWGENDYGQLGDGTTATRLSPVQVQ 272
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFV 353
L ++ G+S ++AL G V+ G GQLG+ + K +P++V+G S +
Sbjct: 273 NL--SGIIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGL---SGI 327
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
I+CG Y+ L + V+ WG +G+LG G T DRN+ V L V +IACG N
Sbjct: 328 VSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGVN 385
Query: 414 FTAAI 418
+ A+
Sbjct: 386 HSMAL 390
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 143/335 (42%), Gaps = 58/335 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSC-FGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
G V+ WG+ NR G G SLP ++ + + + I+ GG H+ +
Sbjct: 544 GTVWAWGD-----------NRYGQLGDGTTTIKSLP--VQVSGISGITAISAGGSHSLAL 590
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
G V++WG+ + G+LG G D P + LS I +++ Y + A+ G ++
Sbjct: 591 KSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSG--ITVISNCIYRSFALKNDGTVWV 648
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG +YN L +P +++G L GI +I CG +H + + G ++ +G
Sbjct: 649 WGSDSYNLPLEKMT------MPIQISG-LSGII--AIECGTYHNLALKNDGTVWAWGKNN 699
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVR---------------------------AACGV 244
FG G G + +IP +V L G++ + +
Sbjct: 700 FGQFGDGTTTTTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVET 759
Query: 245 WHTAAVVEVMVGNSSSSNC----SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
W TA V+ + S SN + GK+FTWG D G+LG G A++ V+ L
Sbjct: 760 WTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGL--EG 817
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ 335
VA + ++ L G + G +GQLGN +
Sbjct: 818 VAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGNGE 852
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 158/358 (44%), Gaps = 52/358 (14%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+++I CG + + G V++WG G LG G + V++P + L+ +I+ ++ G
Sbjct: 477 IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT--ETLNIGDIKAISIGS 534
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+ G ++ WGD Y G LG G +P +V+G + GI ++IS G H+
Sbjct: 535 SHCLALKNDGTVWAWGDNRY--GQLGDGTTTIKSLPVQVSG-ISGI--TAISAGGSHSLA 589
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE---VM 254
+ S G ++ +G G LG G ++ + P +V L G+ TV + C ++ + A+ V
Sbjct: 590 LKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGI-TVISNC-IYRSFALKNDGTVW 647
Query: 255 VGNSSSSNC-------------------------------SSGKLFTWGDGDKGRLGHGD 283
V S S N + G ++ WG + G+ G G
Sbjct: 648 VWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGT 707
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
+P V+ L +A G + ++AL + G V+ G + + +
Sbjct: 708 TTTTNIPVQVSGL--SGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQ 765
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK 401
V+G + EI S +VA L + +V+TWG G+LG G T R + + V L+
Sbjct: 766 VDG------LSEIVSISNNVA-LKNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLE 816
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 28/205 (13%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I CG H + G V++WG+ + G+ G G + P + LS ++ +A G +
Sbjct: 676 IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSG--VKAIAVGGNRS 733
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR-VNGPLEGIHVSSISCGPWHTAVVT 199
A+ G ++ WG + + V W R V+G E + +S + +
Sbjct: 734 IALKSDGTVWQWGRILVSV----SPSTVETWTTARQVDGLSEIVSIS-------NNVALK 782
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
+ G++FT+G +G LG G + V L+G+ V ++ T ++V +
Sbjct: 783 NDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEGVAGVASS----DTTSMVLM------ 832
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDK 284
+ G + WG + G+LG+G++
Sbjct: 833 ----NDGTIRAWGKNNFGQLGNGER 853
Score = 39.3 bits (90), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH----PKLIDALSNMNIELV 133
V+ IA GG + + G V+ WG R+ V + + +D LS E+V
Sbjct: 723 VKAIAVGGNRSIALKSDGTVWQWG-----RILVSVSPSTVETWTTARQVDGLS----EIV 773
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+ + A+ G ++TWG Y G LG G + V+G LEG V+ ++
Sbjct: 774 SIS--NNVALKNDGKVFTWGANDY--GQLGDGTTTARVTVAPVSG-LEG--VAGVASSDT 826
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDR 220
+ V+ + G + +G FG LG+G+R
Sbjct: 827 TSMVLMNDGTIRAWGKNNFGQLGNGER 853
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 167/348 (47%), Gaps = 37/348 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V I+CG H+ +V K G VF +G+ S G+LG G +V P + +L ++ +ACG
Sbjct: 36 VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGR 95
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHG-NEVSHW-VPKRVNGPLEGIHVSSISCGPWHT 195
HT T + +Y +GD + G LG +V+H VP V ++ +S G +HT
Sbjct: 96 SHTIVSTENNIVYGFGDNSD--GQLGQSVADVTHSDVPIEVTR-FNDKNIIQLSAGSYHT 152
Query: 196 AVVTSAGQLFTFGDGTFGVLG----HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
A + G ++ +G + LG D +VS+P V L + +CG HTA V
Sbjct: 153 AALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPI--ALPVLYVSCGHTHTAFVT 210
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
+ G L+T GD + G+LGHG V T +V+CG + T
Sbjct: 211 RI------------GDLYTCGDREYGKLGHGLWSLSRVDTT------EKIVKVSCGANHT 252
Query: 312 VALTTSGHVYTMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+AL +G V+ G+ GQ+G N + G L ++ + +I CG H A +T+
Sbjct: 253 IALNDAGKVFVCGNNDCGQIGLRNVTSQGHL---YPCPITNEPIVQIVCGQSHSAFITAS 309
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK--QVKSIACGTNFT 415
+++ G G G+LG D + +P+LV A DK V+ ++CG N T
Sbjct: 310 GKLFMCGDGKYGKLGI-DVNQITTPTLVLAFVDKNLNVQMVSCGGNHT 356
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 153/307 (49%), Gaps = 33/307 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH---PKLID 123
P ++S V++IACG H + + V+ +G+ S G+LG V +DV H P +
Sbjct: 77 PNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQLGQSV-ADVTHSDVPIEVT 135
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT-YNFGLLGHGNE-VSHWVPKRVNGPLE 181
++ NI ++ G YHT A+ +GD+Y WG + GL ++ V+ VP V P+
Sbjct: 136 RFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIV--PI- 192
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
+ V +SCG HTA VT G L+T GD +G LGHG S+ R V++ + + V+ +
Sbjct: 193 ALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLGHG---LWSLSR-VDTTE--KIVKVS 246
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG--HGDKEAKLVPTCVAALVEP 299
CG HT A+ + +GK+F G+ D G++G + + L P + EP
Sbjct: 247 CGANHTIALND------------AGKVFVCGNNDCGQIGLRNVTSQGHLYPCPITN--EP 292
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-VEEIAC 358
++ CG S + +T SG ++ G YG+LG P V + K+ V+ ++C
Sbjct: 293 -IVQIVCGQSHSAFITASGKLFMCGDGKYGKLGIDVNQITTPTLVLAFVDKNLNVQMVSC 351
Query: 359 GSYHVAV 365
G H +
Sbjct: 352 GGNHTLI 358
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
GDV++WG + + GLN + ++ S+P + + L V ++CG H A V
Sbjct: 159 GDVYVWGSNSDRQL---GLNSMDD---DSVNVSVPTIV--PIALPVLYVSCGHTHTAFVT 210
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G++++ G+ G+LGHG+ S L + I V+CG HT A+ +G ++
Sbjct: 211 RIGDLYTCGDREYGKLGHGLWS------LSRVDTTEKIVKVSCGANHTIALNDAGKVFVC 264
Query: 153 GDGTYNFGLLGHGNEVS--HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G+ + G +G N S H P P+ + I CG H+A +T++G+LF GDG
Sbjct: 265 GNN--DCGQIGLRNVTSQGHLYP----CPITNEPIVQIVCGQSHSAFITASGKLFMCGDG 318
Query: 211 TFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHT 247
+G LG D ++ P V + K L +CG HT
Sbjct: 319 KYGKLGI-DVNQITTPTLVLAFVDKNLNVQMVSCGGNHT 356
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 41/345 (11%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H AL+ +++ +G + G+LG G + V P + AL +++ ACG HT
Sbjct: 40 LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G +Y G + G LG G+ + V+ + +S G +A +T
Sbjct: 100 LVYTEEGKVYAAGGNSE--GQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTE 157
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G LF +GD + G +G + +V +P EV K + + +CG +H+A V
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWI--SCGYYHSAFVT--------- 206
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEP-NFCRVACGHSLTVALTTS 317
+ G+L+T+G+ + G+LG ++ K +P V + P +VACG TVALT
Sbjct: 207 ---TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGI--PGKVNQVACGGGHTVALTEE 261
Query: 318 GHVYTMGSPVYGQLG---------NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
VYT G +GQLG P+ L N+ ++ IACG H A+++
Sbjct: 262 -EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQK--------IQYIACGENHTALISD 312
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+YT+G G +G+LG G + N P+L V+ +ACG
Sbjct: 313 TGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACG 357
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 165/338 (48%), Gaps = 33/338 (9%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G LV G VF++G+ + + S I A ++CG+ HT +T
Sbjct: 2 GEPEELVPDSGAVFTFGK---SKFAENIPSKFWLKNDIPAY-------LSCGDEHTALIT 51
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
+ LY +G + N+G LG G++ + P V L+ V +CG HT V T G++
Sbjct: 52 GNSKLYMFG--SNNWGQLGLGSKTTVNKPTCVKA-LKPEKVKIAACGRNHTLVYTEEGKV 108
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+ G + G LG GD + + + V ++ +T+A +
Sbjct: 109 YAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAAL-----------TE 157
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G LF WGD +G++G ++ VP+ V + +P ++CG+ + +TT G +YT G
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEVT-IGKP-ISWISCGYYHSAFVTTEGELYTFG 215
Query: 325 SPVYGQLG-NPQA--DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
P G+LG +P+ + ++P V G K V ++ACG H LT + EVYT+G G G
Sbjct: 216 EPENGKLGLSPEQLKNHRIPQLVLGIPGK--VNQVACGGGHTVALTEE-EVYTFGLGQFG 272
Query: 382 RLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+LG G + + P +V+ L++++++ IACG N TA I
Sbjct: 273 QLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 151/317 (47%), Gaps = 29/317 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K + P +++ V+ ACG H + ++G+V++ G S G+LG G +
Sbjct: 69 LGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERT 128
Query: 118 HPKLIDALSNMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
+L+ + + I+ ++ G + A+T G L+ WGD + G +G E + VP V
Sbjct: 129 TFQLVSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDNSE--GQIGLAEEANVCVPSEV 186
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKG 234
G +S ISCG +H+A VT+ G+L+TFG+ G LG K+ IP+ V + G
Sbjct: 187 TI---GKPISWISCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPG 243
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCV 293
+ + ACG HT A+ E V +T+G G G+LG G + P V
Sbjct: 244 -KVNQVACGGGHTVALTEEEV-------------YTFGLGQFGQLGLGTFIFETSEPKVV 289
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF- 352
L +ACG + T ++ +GH+YT G +G+LG Q + N+ L +F
Sbjct: 290 KHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLGQEN--FTNQFVPTLCSNFL 347
Query: 353 ---VEEIACGSYHVAVL 366
V +ACG H+ V
Sbjct: 348 KFIVRLVACGGCHMLVF 364
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 23 GSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIA 82
G GH +V+ +G G G LG G ++S PK ++ +Q IA
Sbjct: 251 GGGHTVALTEEEVYTFGLGQF-GQLGLGT--------FIFETSEPKVVKHLQNQKIQYIA 301
Query: 83 CGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVACGEYH 139
CG H AL++ G ++++G+ G+LG G + ++ P L + LVACG H
Sbjct: 302 CGENHTALISDTGHMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCH 360
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 23/337 (6%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H LV G+++ +G + G+LG S + P + AL + + +CG H
Sbjct: 41 HISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNH 100
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G LY+ G + G LG G+ + ++ + +S G +A +T
Sbjct: 101 TLLYTEQGKLYSSGGNSE--GQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALT 158
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+LF +GD + G LG S P++++ K + + +CG +H+A V +
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ------- 209
Query: 260 SSNCSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG DK K + + V+CG T+A+T
Sbjct: 210 -----DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK- 263
Query: 319 HVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G +GQLG+ + +LP V+ L+K + + CG H AV+T K +YT+G
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVD-VLTKKTILYVTCGENHTAVITDKGLLYTFG 322
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G+ + N P L V+S+ACG
Sbjct: 323 DGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISC 190
++CG+ HT VT +G LY +G + N+G LG G+ +S P V L+ V SC
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFG--SNNWGQLGLEAGSAISK--PTCVKA-LKSEKVVFASC 96
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G HT + T G+L++ G + G LG GD + +E+ ++ +T+A
Sbjct: 97 GRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAA 156
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ V GKLF WGD +G+LG +KEA + T + ++CG+
Sbjct: 157 LTV-----------DGKLFMWGDNSEGQLGL-EKEA-IYSTPQKIDIGKPISWISCGYYH 203
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +T G +YT G P G+LG P K P RV G K V+ ++CG H +T
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK--VKIVSCGGEHTIAVT 261
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
K EVYT+G G G+LGHG + P V+ L K + + CG N TA I
Sbjct: 262 EK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVIT 313
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 22/241 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ ++ G +A + G++F WG+ S G+LG ++ P+ ID I ++CG
Sbjct: 144 IKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGY 201
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YH+ VT G+LYT+G+ L H P+RV+G L G V +SCG HT
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG-LSG-KVKIVSCGGEHTIA 259
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
VT +++TFG G FG LGHG +P+ V+ L + CG HTA + +
Sbjct: 260 VTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD---- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEPNFCRVACG--HSLTV 312
G L+T+GDG G+LG G++ + VP + ++ VACG H L
Sbjct: 315 --------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
Query: 313 A 313
A
Sbjct: 367 A 367
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 10 RVS-LSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
RVS LS V S G H +V+ +G G G LG G ++ LPK
Sbjct: 239 RVSGLSGKVKIVSCGGEHTIAVTEKEVYTFGLGQF-GQLGHGT--------FIFETQLPK 289
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALS 126
A++ + + CG H A++ +G ++++G+ G+LG G + ++ P L
Sbjct: 290 AVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFL 349
Query: 127 NMNIELVACGEYH 139
++ VACG H
Sbjct: 350 KFTVQSVACGGCH 362
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 169/366 (46%), Gaps = 48/366 (13%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG G DG LG G N K + KALE V+++ G R++ +
Sbjct: 7 VIAWGSGE-DGQLGIGNNEE------KEWVCIVKALEP---YKVRSVVAGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++F+WG G LGH ++ + P + AL+N+NI A G +H AV G Y WG
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 154 DGTYNFGLLGHGNEVSH----------WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
Y G G E +P+R L V ++ G H+ V+T G
Sbjct: 117 GNEY--GQCGEEPERKDDTGRPLRRDIVIPQRCASKLV---VRQVAAGGTHSVVLTREGH 171
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++++G GD K +S+P V+ L+ +R + A G +H A+ E
Sbjct: 172 VWSWGQ----PWPPGDIKQISVPVRVQGLERVRLI--AVGAFHNLALQE----------- 214
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G L+ WG+ + G+LG GD + + P V L +A G + ALT G VY
Sbjct: 215 -DGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGW 273
Query: 324 GSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G +G+LG N ++ +P RV + + V+ ++CG H LT +YT+G+G +
Sbjct: 274 GRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQ-VSCGGTHSVALTRDGRMYTFGRGDH 332
Query: 381 GRLGHG 386
GRLG+G
Sbjct: 333 GRLGYG 338
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 141/336 (41%), Gaps = 38/336 (11%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
V +WG G+LG G + + ++ AL + V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWG--W 64
Query: 157 YNFGLLGHGNEV-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
G LGH E + +P +V L +++ + G WH V G+ + +G +G
Sbjct: 65 NQRGTLGHPPETKTENIPSQVKA-LANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 216 GHGD----------RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G R+ + IP+ S +R V A G S
Sbjct: 124 GEEPERKDDTGRPLRRDIVIPQRCASKLVVRQVAAG--------------GTHSVVLTRE 169
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G +++WG GD + VP V L V H+L AL G ++ G+
Sbjct: 170 GHVWSWGQ----PWPPGDIKQISVPVRVQGLERVRLIAVGAFHNL--ALQEDGTLWAWGN 223
Query: 326 PVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
YGQLG + P V+G LS + +IA G +H LT EVY WG+G +GRLG
Sbjct: 224 NEYGQLGTGDTQPRSQPITVQG-LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282
Query: 385 HGDTDD--RNSPSLVEALKDKQVKSIACGTNFTAAI 418
GD D + P V L + + ++CG + A+
Sbjct: 283 FGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVAL 318
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 60 VKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHP 119
++ D +P+ S +V V+ +A GG H+ ++ ++G V+SWG+ G + P
Sbjct: 137 LRRDIVIPQRCASKLV--VRQVAAGGTHSVVLTREGHVWSWGQP----WPPGDIKQISVP 190
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ L + L+A G +H A+ G L+ WG+ Y G LG G+ P V G
Sbjct: 191 VRVQGLER--VRLIAVGAFHNLALQEDGTLWAWGNNEY--GQLGTGDTQPRSQPITVQG- 245
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD--RKSVSIPREVESLKGLRT 237
L G+ + I+ G WH+ +T G+++ +G G G LG GD + S +P+ V L G
Sbjct: 246 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDI 305
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
V+ +CG H+ A+ G+++T+G GD GRLG+G K P V +
Sbjct: 306 VQVSCGGTHSVALTR------------DGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDI 353
Query: 298 EP--NFCRVACGHSLTVALTTSGHVYTM 323
P N L SG +T+
Sbjct: 354 PPPKNLTDSGDAGRWIAKLVASGGRHTL 381
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 16/195 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V+ IA G H + + G +++WG G+LG G P + LS + + +A G
Sbjct: 199 VRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGG 258
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
+H+ A+T G++Y WG G + G ++ S VP+RVN L G + +SCG H+
Sbjct: 259 WHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVN-LLVGEDIVQVSCGGTHSVA 317
Query: 198 VTSAGQLFTFGDGTFGVLGHGDR----KSVSIPREVESLKGLRTVRAACGVW-------- 245
+T G+++TFG G G LG+G + + + +P ++ K L T G W
Sbjct: 318 LTRDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNL-TDSGDAGRWIAKLVASG 376
Query: 246 --HTAAVVEVMVGNS 258
HT A+VE G+S
Sbjct: 377 GRHTLAIVEWHTGDS 391
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G N K +P+ + V D+ ++CGG H+ +
Sbjct: 268 GEVYGWGRGE-HGRLGFGDND-------KSSKMVPQRVNLLVGEDIVQVSCGGTHSVALT 319
Query: 93 KQGEVFSWGEESGGRLGHG----------VDSDVLHPK-LIDA--LSNMNIELVACGEYH 139
+ G ++++G GRLG+G V D+ PK L D+ +LVA G H
Sbjct: 320 RDGRMYTFGRGDHGRLGYGRKVTTGQPMEVPIDIPPPKNLTDSGDAGRWIAKLVASGGRH 379
Query: 140 TCAVT 144
T A+
Sbjct: 380 TLAIV 384
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ +++ V WG G +G+LG G+ +++ +V+AL+ +V+S+ G+ + AIC
Sbjct: 1 MATESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAIC 54
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 23/337 (6%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H LV G+++ +G + G+LG S + P + AL + + +CG H
Sbjct: 41 HISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNH 100
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G LY+ G + G LG G+ + ++ + +S G +A +T
Sbjct: 101 TLLYTEQGKLYSSGGNSE--GQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALT 158
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+LF +GD + G LG S P++++ K + + +CG +H+A V +
Sbjct: 159 VDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQ------- 209
Query: 260 SSNCSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG DK K + + V+CG T+A+T
Sbjct: 210 -----DGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEK- 263
Query: 319 HVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G +GQLG+ + +LP V+ L+K + + CG H AV+T K +YT+G
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVD-VLTKKTILYVTCGENHTAVITDKGLLYTFG 322
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G+ + N P L V+S+ACG
Sbjct: 323 DGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 142/293 (48%), Gaps = 27/293 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLG--HGNEVSHWVPKRVNGPLEGIHVSSISC 190
++CG+ HT VT +G LY +G + N+G LG G+ +S P V L+ V SC
Sbjct: 42 ISCGDEHTVLVTGNGKLYVFG--SNNWGQLGLEAGSAISK--PTCVKA-LKSEKVVFASC 96
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G HT + T G+L++ G + G LG GD + +E+ ++ +T+A
Sbjct: 97 GRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAA 156
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ V GKLF WGD +G+LG +KEA + T + ++CG+
Sbjct: 157 LTV-----------DGKLFMWGDNSEGQLGL-EKEA-IYSTPQKIDIGKPISWISCGYYH 203
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +T G +YT G P G+LG P K P RV G K V+ ++CG H +T
Sbjct: 204 SAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGK--VKIVSCGGEHTIAVT 261
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
K EVYT+G G G+LGHG + P V+ L K + + CG N TA I
Sbjct: 262 EK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVIT 313
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 118/241 (48%), Gaps = 22/241 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ ++ G +A + G++F WG+ S G+LG ++ P+ ID I ++CG
Sbjct: 144 IKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGY 201
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
YH+ VT G+LYT+G+ L H P+RV+G L G V +SCG HT
Sbjct: 202 YHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG-LSG-KVKIVSCGGEHTIA 259
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
VT +++TFG G FG LGHG +P+ V+ L + CG HTA + +
Sbjct: 260 VTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD---- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEPNFCRVACG--HSLTV 312
G L+T+GDG G+LG G++ + VP + ++ VACG H L
Sbjct: 315 --------KGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366
Query: 313 A 313
A
Sbjct: 367 A 367
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 10 RVS-LSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
RVS LS V S G H +V+ +G G G LG G ++ LPK
Sbjct: 239 RVSGLSGKVKIVSCGGEHTIAVTEKEVYTFGLGQF-GQLGHGT--------FIFETQLPK 289
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALS 126
A++ + + CG H A++ +G ++++G+ G+LG G + ++ P L
Sbjct: 290 AVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFL 349
Query: 127 NMNIELVACGEYH 139
++ VACG H
Sbjct: 350 KFTVQSVACGGCH 362
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 171/351 (48%), Gaps = 34/351 (9%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L GI + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKITT-LNGIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + P + AL ++CG T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYH-VAVLT 367
LT G V+T G GQLG P+ G +L R++G V +I CGSYH +A +
Sbjct: 250 VLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVH 304
Query: 368 SKTEVYTWGKGAN--GRLGHGD--TDDRNSPSLV--EALKDKQVKSIACGT 412
+ +V ++G G + + H + T++ + L+ E L D QVK I GT
Sbjct: 305 TTGQVVSFGHGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAGT 355
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + + + + GD + G LG +P+ + LE + V +SCG
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K +S P+++ +L G++ ++ +CG +H+ A+
Sbjct: 86 HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLAL-- 143
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 144 ----------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ G + GS GQL N A P + G L V I+CG H AVLT
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSI-GALKNLGVVYISCGDEHTAVLT 252
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G +G+LG+ T ++ P LVE + D V I CG+ T A
Sbjct: 253 QDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 166/351 (47%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+ + I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P + +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSIGALKNLGVVYISCGDEHTAVLTQ------------DGKVFTFGDNCSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V ++ ++ CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C ++ + + G AN H DT ++P
Sbjct: 325 PEA-LTENF--DISCLISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTHAP 372
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 121/253 (47%), Gaps = 26/253 (10%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLIVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL--- 180
+L + + VA G H+ A++L G + WG + L N VP + N PL
Sbjct: 177 SLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRN-----VPAQSNKPLSIG 231
Query: 181 --EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
+ + V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL +
Sbjct: 232 ALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLVS- 290
Query: 239 RAACGVWHTAAVV 251
+ CG +HT A V
Sbjct: 291 QIDCGSYHTLAYV 303
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITTLNGIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P + ALK+ V I+CG
Sbjct: 187 AAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDE 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 9/124 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG + + G N V S+ P ++ + L V I+CG H A++
Sbjct: 200 GTSFGWGSNSAGQLALSGRN-------VPAQSNKPLSIGALKNLGVVYISCGDEHTAVLT 252
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYT 151
+ G+VF++G+ G+LG+ + P+L++ + + + + CG YHT A V +G + +
Sbjct: 253 QDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVS 311
Query: 152 WGDG 155
+G G
Sbjct: 312 FGHG 315
>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
gallopavo]
Length = 567
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 142/302 (47%), Gaps = 27/302 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G V + EVF G G LG G + PK +D+L I AC Y H
Sbjct: 71 AGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKI---ACLSYGSGPH 127
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G++YTWG Y+ LG+G VP +V+ L V ++CG H+ V+T
Sbjct: 128 VVLATEEGEVYTWGHNAYS--QLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLT 185
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G+++T+G G +G G + IPR V S L+ V ACG + AVVE
Sbjct: 186 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE------ 239
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G + P +AAL RVACG + T+ LT G
Sbjct: 240 ------NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEG 293
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTW 375
+Y G+ YGQLG +++ P V + K V EI AC S H A T +VY W
Sbjct: 294 QIYAWGANSYGQLGTGNKSNQSYPTTV--TVDKDRVIEIAACHSAHTSAAKTQSGQVYMW 351
Query: 376 GK 377
G+
Sbjct: 352 GQ 353
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 143/291 (49%), Gaps = 28/291 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D V G+N G C G + S++ PK L+S L + IAC G H L ++GEV
Sbjct: 82 DEVFVLGMNCSG-CLGTGDVQSTIEPKRLDS---LCGKKIACLSYGSGPHVVLATEEGEV 137
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++WG + +LG+G + L P + L N + VACG +H+ +T G++YTWG
Sbjct: 138 YTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN- 196
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV L+ V +I+CG + V G+++ +G G LG
Sbjct: 197 -NSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 255
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 256 LGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD------------EGQIYAWGANSY 303
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G+LG G+K + PT V + + +A HS + A T SG VY G
Sbjct: 304 GQLGTGNKSNQSYPTTV-TVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 353
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG G+ S PKR++ L G ++ +S G H + T G+++T+G + LG+G
Sbjct: 93 GCLGTGDVQSTIEPKRLDS-LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 151
Query: 219 DRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
+P +V + L + + ACG H+ + S G+++TWG + G
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLT------------SDGEVYTWGYNNSG 199
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
++G G + +P V + ++ +ACG ++A+ +G VY G GQLG
Sbjct: 200 QVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSS 259
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
+ P R+ L V+ +ACG H VLT + ++Y WG + G+LG G+ +++ P+
Sbjct: 260 GNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 318
Query: 396 LVEALKDKQVKSIACGTNFTAA 417
V KD+ ++ AC + T+A
Sbjct: 319 TVTVDKDRVIEIAACHSAHTSA 340
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 107/223 (47%), Gaps = 13/223 (5%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
VT ++F G G LG GD +S P+ ++SL G + AC + + V +
Sbjct: 78 VTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKI---ACLSYGSGPHVVLAT-- 132
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTT 316
G+++TWG +LG+G LVP V+ LV VACG ++ LT+
Sbjct: 133 ------EEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTS 186
Query: 317 SGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VYT G GQ+G+ A+ +P RV L V IACG + EVY W
Sbjct: 187 DGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVW 246
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G NG+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 247 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVL 289
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+V+ WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 188 GEVYTWGYNNS--------GQVGS--GSTANQPIPRRVTSCLQNKVVV---NIACGQMCS 234
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V + GEV+ WG G+LG G + P I AL + ++ VACG HT +T G
Sbjct: 235 MAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQ 294
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + + + +C HT A T +GQ++ +
Sbjct: 295 IYAWGANSY--GQLGTGNKSNQSYPTTVTVDKDRV-IEIAACHSAHTSAAKTQSGQVYMW 351
Query: 208 GD--GTFGVLGH 217
G G VL H
Sbjct: 352 GQCRGQSVVLPH 363
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 175/418 (41%), Gaps = 90/418 (21%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVAC 135
++++ACG +H+ V + G+V+ WG G+LG+G ++ L P ++ L + + C
Sbjct: 31 IRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANALKPVRVEGLRHERVVAGVC 90
Query: 136 GEYHTCAVTLSGDLYTWG------DGTYN---FGL------------------------- 161
G H AVT+ G LY WG +G+ N FG+
Sbjct: 91 GYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYA 150
Query: 162 ----------------LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G + P+ V G L+ + V ++ G + VTS G+++
Sbjct: 151 AGATGEELEELSRVQNFGSFTPYTQPSPEVVTG-LQHVKVVEVAAGYSFSLAVTSQGEVY 209
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
++G LG G R + S+P+ V L+G+ V A CG H+ + ++
Sbjct: 210 SWGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLL------------SAA 257
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN---------FCRVACGHSLTVALTT 316
G ++T+G G G+LGHG + P V ALV ++ACG T+AL
Sbjct: 258 GHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGV 317
Query: 317 SGHVYTMGSPVYGQLG--NPQADGKLPNRVE--------------GKLSKSFVEEIACGS 360
SG V+T GS YGQ G N D R E G + ++CG
Sbjct: 318 SGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGH 377
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H VY+WG G+ G LGHG+ + P L+ + +++ A G + A+
Sbjct: 378 LHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 26/217 (11%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G + + S+P+ + + + + CG +H+ L++ G V+++G G+LGHGV SD
Sbjct: 221 LGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDER 280
Query: 118 HPKLIDAL---------SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
P+ ++AL + I +ACG +HT A+ +SG ++TWG Y G G N
Sbjct: 281 FPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEY--GQQGGTNAY 338
Query: 169 SHW---------------VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
W P+ ++G +G H++ +SCG H G ++++G G++G
Sbjct: 339 EDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYG 398
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
VLGHG+ + +P+ + + G R V+ A G H+ AV
Sbjct: 399 VLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 40/272 (14%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P+ + + V +A G + V QGEV+SWG +LG G + P+L+ L
Sbjct: 178 PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQ 237
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG--PLE--- 181
++I CG+ H+ ++ +G +YT+G G FG LGHG P+RV P E
Sbjct: 238 GVHIVSATCGQQHSVLLSAAGHVYTFGLGV--FGQLGHGVSSDERFPRRVEALVPAEEGV 295
Query: 182 ---GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG-----------VLGHGDRKSVSI-- 225
G + I+CG HT + +G ++T+G +G G KS ++
Sbjct: 296 ESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMIC 355
Query: 226 --PREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 282
PR + G +CG H A G +++WG G G LGHG
Sbjct: 356 ATPRSLSGCFDGKHIAHVSCGHLHNLA------------TARDGSVYSWGWGSYGVLGHG 403
Query: 283 DKEAKLVPTCVAALVEPNFCRVACG--HSLTV 312
+ +LVP + + + A G HSL V
Sbjct: 404 NHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 130/328 (39%), Gaps = 77/328 (23%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
GT G LG G + + + G + S++CG H+ V G ++ +G G
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60
Query: 215 LGHGDRKSVSI--PREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G+RK+ + P VE L+ R V CG H AV VG GKL+ WG
Sbjct: 61 LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVT---VG---------GKLYQWG 108
Query: 273 --------DGDKGRLG--------HGDKEAKLV--------------------------- 289
+K G + D+ ++V
Sbjct: 109 MLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFG 168
Query: 290 ---------PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGK 339
P V L VA G+S ++A+T+ G VY+ G QLG + +
Sbjct: 169 SFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQS 228
Query: 340 LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA 399
+P V L + CG H +L++ VYT+G G G+LGHG + D P VEA
Sbjct: 229 VPQLVP-HLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEA 287
Query: 400 L---------KDKQVKSIACGTNFTAAI 418
L +++ IACG++ T A+
Sbjct: 288 LVPAEEGVESAGERIVQIACGSHHTLAL 315
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 122/214 (57%), Gaps = 15/214 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G + + + P+L++ LS + + ++ G
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAG 108
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ A+++SG++Y+WG + G LG G+ P V L+ V ++CG HTA
Sbjct: 109 KAHSMALSMSGNIYSWGRN--DLGQLGLGHTDGEEFPSLVEA-LDSQKVEFLACGGSHTA 165
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T GQ+FTFG G G LGH ++ PR V L G+R + ACG HT A V +
Sbjct: 166 LLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDL-- 223
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
GK+F++G G +G+LG+G +L+P
Sbjct: 224 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 248
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 139/275 (50%), Gaps = 21/275 (7%)
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLK 233
R L+ + I+CG +H+ ++ G+LF +G G LG G S+ P+ VE L
Sbjct: 39 RFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLS 98
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
G+ V+ + G H+ A+ SG +++WG D G+LG G + + P+ V
Sbjct: 99 GVPLVQISAGKAHSMAL------------SMSGNIYSWGRNDLGQLGLGHTDGEEFPSLV 146
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
AL +ACG S T LT G V+T G+ +GQLG+ +L R+ +L+ V
Sbjct: 147 EALDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRV 206
Query: 354 EEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
++ACG H +A ++ +V+++G G G+LG+G T ++ P ++ ++ +K T
Sbjct: 207 TQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLK-FESRT 265
Query: 413 NFTAAICLHKWVSGVDQSMC--SGCRLPFNNFKRK 445
+ I ++G +QS+ G + P+ N +RK
Sbjct: 266 SEKELIM----IAGGNQSILLWMGKKNPYVNLRRK 296
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 119/259 (45%), Gaps = 27/259 (10%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ + ++ G H +++ G+ F + + + H + L +I + C
Sbjct: 7 MKIHSVDQGAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKSIIQITC 54
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+YH+ A++ G+L+ WG + G LG G + ++ L G+ + IS G H+
Sbjct: 55 GDYHSLALSKGGELFAWGQNLH--GQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAHS 112
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ +G ++++G G LG G P VE+L + ACG HTA + E
Sbjct: 113 MALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE--- 169
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
G++FT+G G G+LGH + +L P V L +VACG T+A
Sbjct: 170 ---------DGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYV 220
Query: 316 TS-GHVYTMGSPVYGQLGN 333
+ G V++ GS GQLGN
Sbjct: 221 SDLGKVFSFGSGKEGQLGN 239
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 111/237 (46%), Gaps = 27/237 (11%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ + S+ G H +++S G+ F + S+ R L+ ++ C
Sbjct: 7 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 54
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G +H+ A+ G+LF WG G+LG G A + P V L
Sbjct: 55 GDYHSLAL------------SKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPL 102
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGS 360
+++ G + ++AL+ SG++Y+ G GQLG DG+ P+ VE L VE +ACG
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEA-LDSQKVEFLACGG 161
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H A+LT +V+T+G G +G+LGH T + P LV L +V +ACG T A
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLA 218
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 101/195 (51%), Gaps = 13/195 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG +G F P+ +E + + I+ G H+ ++
Sbjct: 66 GELFAWGQNL-HGQLG-----IGRLFA---SIPTPQLVEHLSGVPLVQISAGKAHSMALS 116
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG G+LG G P L++AL + +E +ACG HT +T G ++T+
Sbjct: 117 MSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTF 176
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G + G LGH + + P+ V L GI V+ ++CG HT A V+ G++F+FG G
Sbjct: 177 GAGKH--GQLGHNSTQNELRPRLVT-ELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGK 233
Query: 212 FGVLGHGDRKSVSIP 226
G LG+G + IP
Sbjct: 234 EGQLGNGGTHNQLIP 248
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 14/161 (8%)
Query: 21 SQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQ 79
S G H ++ G+++ WG G LG G + G F SL +AL+S V+
Sbjct: 106 SAGKAHSMALSMSGNIYSWGRN-DLGQLGLG-HTDGEEF-----PSLVEALDSQ---KVE 155
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+ACGG H AL+ + G+VF++G G+LGH + L P+L+ L+ + + VACG H
Sbjct: 156 FLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRH 215
Query: 140 TCA-VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
T A V+ G ++++G G G LG+G + +P + P
Sbjct: 216 TLAYVSDLGKVFSFGSGKE--GQLGNGGTHNQLIPLPMKLP 254
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 152/336 (45%), Gaps = 26/336 (7%)
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN----IELVACGEYHTCAVTLSG 147
N + +FS+G+ + G L G +D P +D L +N + VACG T + +G
Sbjct: 27 NNRAGLFSFGQNTYGELALGDTNDRSTPTRVD-LGRINDTKHVVDVACGNEQTTILFENG 85
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPK-RVNGPLEGIHVSSISCG--PWHTAVVTSAGQL 204
D++T G +G + VP R + L H + G H A + + G L
Sbjct: 86 DVFTCGYNDSGQCAIG----TTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFL 141
Query: 205 FTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+T G G LG G +V+ VE L G R V AC +HTA V++
Sbjct: 142 YTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMD------------ 189
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
+G L G D G+LG GD LVP V VACG TVA G V G
Sbjct: 190 NGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFG 249
Query: 325 SPVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+GQLG + LP R+ L ++ V +++CG +H A++T VYT+G+ G+
Sbjct: 250 KNDHGQLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQ 309
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LG G P+ VE+L ++ +ACG T A+
Sbjct: 310 LGLGHKLHMARPTPVESLSRMRITQVACGCYHTLAL 345
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 174/386 (45%), Gaps = 32/386 (8%)
Query: 45 GVLGGGLNRVGS-CFGVKMDSSLPKALESAVVLD---VQNIACGGRHAALVNKQGEVFSW 100
G+ G N G G D S P ++ + D V ++ACG ++ + G+VF+
Sbjct: 31 GLFSFGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90
Query: 101 GEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVA-CGEYHTCAVTLSGDLYTWGDGTYN 158
G G+ G V + LS+ + + L + G H A+ +G LYT G +N
Sbjct: 91 GYNDSGQCAIGTTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVG---FN 147
Query: 159 F-GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGH 217
G LG G + V L G V ++C +HTA+V G L G +G LG
Sbjct: 148 MRGQLGLGTATTVTEATLVE-ELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGM 206
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
GD +PR V+ + ACG +T A + G + +G D G
Sbjct: 207 GDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLR------------DGGVVAFGKNDHG 254
Query: 278 RLGHGD-KEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NP 334
+LG E L+PT +A ++ +++CG+ T +T G VYT G YGQLG
Sbjct: 255 QLGLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGH 314
Query: 335 QADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+ P VE LS+ + ++ACG YH L+ +V+ +G+ +G+LG + D SP
Sbjct: 315 KLHMARPTPVE-SLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCLSP 373
Query: 395 SLVEALKDKQVKSIACGTNFTAAICL 420
L+ L++K V + F ++CL
Sbjct: 374 QLISTLRNKPVAA-----GFYHSVCL 394
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 167/381 (43%), Gaps = 62/381 (16%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
V ++AC H A+V G++ + G G+LG G S L P+ +D + VACG+
Sbjct: 174 VVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQ 233
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHT 195
++T A G + +G + G LG + VS V P R+ PL+ V +SCG HT
Sbjct: 234 HYTVASLRDGGVVAFGKNDH--GQLGL-DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHT 290
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A+VT G ++TFG +G LG G + ++ P VESL +R + ACG +HT A+ +
Sbjct: 291 AIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLALSD--- 347
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
GK+F +G + G+LG L P ++ L VA G +V L
Sbjct: 348 ---------DGKVFPFGRNNHGQLGLETSMDCLSPQLISTLRNK---PVAAGFYHSVCL- 394
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK----------SFVEEIACGSYHVAV 365
+G P+++ P + G L K +FV E H +
Sbjct: 395 ---------------VGTPKSENPPPYTLSGDLRKMLNNPTRSDTTFVIEGRPLFAHSCI 439
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSP--------SLVEALKDKQVKSIACGTNFTA- 416
L ++ E K +GR+ G + P +L+E L QV +A + TA
Sbjct: 440 LVARCE--PLEKMLDGRMKDGAQPEIVIPEYSYDVFAALMEFLYTDQVAVLA-SPDLTAD 496
Query: 417 -AICLHKWVSGVDQSMCSGCR 436
A+ LH DQ + + R
Sbjct: 497 FALELHAL---ADQYLVTTLR 514
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K+ + P +ES + + +ACG H ++ G+VF +G + G+LG D L
Sbjct: 312 LGHKLHMARPTPVESLSRMRITQVACGCYHTLALSDDGKVFPFGRNNHGQLGLETSMDCL 371
Query: 118 HPKLIDALSNMNIELVACGEYHT-CAV-----------TLSGDL 149
P+LI L N + VA G YH+ C V TLSGDL
Sbjct: 372 SPQLISTLRN---KPVAAGFYHSVCLVGTPKSENPPPYTLSGDL 412
>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
Length = 794
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 190/424 (44%), Gaps = 65/424 (15%)
Query: 36 FIWGEG-TGDGVLGGGLNRVGSCFGVKMDSSLPKAL---ESAVVLDVQNIACGGRHAALV 91
+IW G DG LG + D LPK + + + I+ G H+A+V
Sbjct: 167 YIWSFGKNSDGELG---------ISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIV 217
Query: 92 NKQGEVFSWGEESGGRLG----HGVD-SDVLHPKLIDALS-NMNIELVACGEYHTCAVTL 145
K GE++ G + G+LG +G+ S + D + N ++ VACG+YHT +
Sbjct: 218 TKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQ 277
Query: 146 SGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLF 205
G ++ WG GT + + + + P+ V+G L+G + I CG +H+ + G+++
Sbjct: 278 DGQVFAWG-GTLHKKVGEKNAQAQNNEPRIVSG-LQGKQIVHIDCGDFHSVALDIQGRVY 335
Query: 206 TFGDG----TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++G G G GHG+ + + P +V+ + + V+ + G +HT A+ E
Sbjct: 336 SWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCE--------- 386
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA--------------------ALVEPNF 301
+L+ WG G G G G+ +A P V + +P
Sbjct: 387 --EDNELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLI 444
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGS 360
+++ G T+ LT+ G VY+ G +GQLG + P V+ LSK+ ++ IA G
Sbjct: 445 TQISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKN-IKAIAAGW 503
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
H +L+ K +++ G G +G+LG D + R + V L K +I G N
Sbjct: 504 NHSLILSDKGDLFACGYGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGGN------- 556
Query: 421 HKWV 424
H WV
Sbjct: 557 HSWV 560
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 56/364 (15%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNI----ELVACGEYHTCAVTLSGD 148
K+ ++S+G+ S G LG D PK I ++ N+ + + ++ G +H+ VT +G+
Sbjct: 164 KKAYIWSFGKNSDGELGISSQKDQFLPKPI-SIQNLKLSHTAKYISSGSHHSAIVTKAGE 222
Query: 149 LYTWGDGTYNFGLLG----HGNEVSHWVPKRVNGPLEGIHVSS----ISCGPWHTAVVTS 200
LY G + G LG +G VS + + +GI V+ ++CG +HT +
Sbjct: 223 LYVSGSQLH--GKLGIQSVNGMHVSKFTQVTM---FDGIKVNQKVKQVACGDYHTLCLMQ 277
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
GQ+F +G +G + ++ + PR V L+G + V CG +H+ A+
Sbjct: 278 DGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVAL--------- 328
Query: 260 SSNCSSGKLFTWGDG----DKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL- 314
G++++WG G +KG+ GHG+ E P V + +++ G T+AL
Sbjct: 329 ---DIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALC 385
Query: 315 TTSGHVYTMGSPVYGQ--LGNPQADGK-----LP---------NRVEGKLS----KSFVE 354
+Y GS YG+ LG QA K +P N+++ + + K +
Sbjct: 386 EEDNELYAWGSGTYGECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLIT 445
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNF 414
+I+ G +H +LTS+ VY++G G++G+LG T + SP LV+ L K +K+IA G N
Sbjct: 446 QISAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWNH 505
Query: 415 TAAI 418
+ +
Sbjct: 506 SLIL 509
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G L++ + ++ P+ + + +I CG H+ ++
Sbjct: 279 GQVFAWG---------GTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALD 329
Query: 93 KQGEVFSWG----EESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV-TLSG 147
QG V+SWG + G+ GHG + D+ P + +++ I ++ G +HT A+
Sbjct: 330 IQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEEDN 389
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH-------------------VSSI 188
+LY WG GTY G G G + PK V P + + ++ I
Sbjct: 390 ELYAWGSGTY--GECGLGEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQI 447
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
S G HT ++TS G++++FG G+ G LG K+ P+ V+ L + ++A W+ +
Sbjct: 448 SAGGHHTLLLTSRGRVYSFGYGSHGQLGLRSTKNFCSPQLVKDLLS-KNIKAIAAGWNHS 506
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG- 307
++ G LF G G+ G+LG DKE + T VA L N + G
Sbjct: 507 LIL-----------SDKGDLFACGYGNHGQLGLNDKEPRTQFTHVANLGGKNAYNIYAGG 555
Query: 308 -HSLTV 312
HS V
Sbjct: 556 NHSWVV 561
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 31/250 (12%)
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR--EVESLKGLRTVRAACGVWHTAAVVEVM 254
+ T +++FG + G LG +K +P+ +++LK T + H +A+V
Sbjct: 161 IKTKKAYIWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIV--- 217
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLG----HGDKEAKLVPTCVAALVEPN--FCRVACGH 308
+G+L+ G G+LG +G +K + ++ N +VACG
Sbjct: 218 --------TKAGELYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVKQVACGD 269
Query: 309 SLTVALTTSGHVYTMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
T+ L G V+ G ++ ++G N QA P V G K V I CG +H L
Sbjct: 270 YHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVH-IDCGDFHSVAL 328
Query: 367 TSKTEVYTWGKGA----NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC--- 419
+ VY+WG G G+ GHG+ +D P V+ + +++ I+ G T A+C
Sbjct: 329 DIQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALCEED 388
Query: 420 --LHKWVSGV 427
L+ W SG
Sbjct: 389 NELYAWGSGT 398
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 15/217 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G P++++ L+ + + ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
E H+ A+++SG++Y+WG FG LG G+ S P + G L+ V ++CG H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKN--EFGQLGLGHTESKDYPSLIEG-LDNQKVEFVACGGSHSA 256
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T G LFTFG G G LGH ++ P V L G R + ACG WHT A V +
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDL-- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
GK+F++G G G+LG+G +L+P V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 26/268 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + S + H + + L
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFENVLQ 136
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I + CG+YH+ A++ G+L+ WG + G LG G + ++ L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G FG LG G +S P +E L + ACG H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSH 254
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+A + + G LFT+G G G+LGH + +L P VA LV ++AC
Sbjct: 255 SALLTQ------------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIAC 302
Query: 307 GHSLTVALTTS-GHVYTMGSPVYGQLGN 333
G T+A + G V++ GS GQLGN
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 139/290 (47%), Gaps = 28/290 (9%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I NM I V G H ++ G + + + Y+ L R
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDN--YSMKHL------------RFEN 133
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRT 237
L+ + I+CG +H+ ++ G+LF +G G LG G + S + P+ VE L G+
Sbjct: 134 VLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ + G H+ A+ SG +++WG + G+LG G E+K P+ + L
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLD 241
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
VACG S + LT G ++T G+ +GQLG+ +L + +L V +IA
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301
Query: 358 CGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK 406
CG +H +A ++ +V+++G G +G+LG+G T D+ P V+ +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG VG F ++ P+ +E + + I+ G H+ ++
Sbjct: 157 GELFAWGQNL-HGQLG-----VGRKFP---STTTPQIVEHLAGVPLAQISAGEAHSMALS 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG+ G+LG G +P LI+ L N +E VACG H+ +T G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G + G LGH + + P V L G V+ I+CG WHT A V+ G++F+FG G
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLV-AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG+G + +P V+
Sbjct: 325 DGQLGNGGTRDQLMPLPVK 343
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 26/239 (10%)
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ + + S+ G H +++S G+ F + D S+ R L+ + ++
Sbjct: 95 KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFENVLQEKKIIQI 143
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEP 299
CG +H+ A+ G+LF WG G+LG G K + P V L
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIAC 358
+++ G + ++AL+ SG++Y+ G +GQLG + K P+ +EG L VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG-LDNQKVEFVAC 250
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H A+LT ++T+G G +G+LGH T + P LV L +V IACG T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 295 ALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-- 352
L E ++ CG ++AL+ G ++ G ++GQLG K P+ ++ +
Sbjct: 134 VLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLAG 190
Query: 353 --VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
+ +I+ G H L+ +Y+WGK G+LG G T+ ++ PSL+E L +++V+ +AC
Sbjct: 191 VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVAC 250
Query: 411 GTNFTAAI 418
G + +A +
Sbjct: 251 GGSHSALL 258
>gi|223997658|ref|XP_002288502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975610|gb|EED93938.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 597
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 143/303 (47%), Gaps = 20/303 (6%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
VF+WG GTG G+LG S + P+ +E ++ + G HA V+K
Sbjct: 163 QVFVWG-GTGVGLLG-----FTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVSK 216
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++F WG S G LG G ++V PK ++ L + + V GE H C T +LY WG
Sbjct: 217 GGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACIKTSQHELYAWG 276
Query: 154 DGTYNFGLLGHGNE---VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G LG GN V P + P V I+CG HT TS+ +F++G G
Sbjct: 277 HCAN--GRLGIGNNDEAVFLSSPHPIRMPTSE-KVRFIACGAEHTLACTSS-TVFSWGSG 332
Query: 211 TFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGHG D P E+ +LKG + G WH+A V+ + + SG L+
Sbjct: 333 DGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVIAIPLMK------DSGWLY 386
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
TWG G +G+LG G P V L + V CG S A+ + G++YT GS +G
Sbjct: 387 TWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYTWGSNKHG 446
Query: 330 QLG 332
LG
Sbjct: 447 ALG 449
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 169/372 (45%), Gaps = 40/372 (10%)
Query: 28 DGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRH 87
D + G V+ G+ G LG G CF V + S+ K + + NI+ H
Sbjct: 103 DLEEQGAVYCAGKNNA-GQLGLGDWNDRQCFTV-IRSTRGKHVHHVSTSNGANISFATTH 160
Query: 88 AALVNKQGEVFSWGEESGGRLGHGVDS--DVLH--PKLIDALSNMNIELVACGEYHTCAV 143
Q +VF WG G LG S +V+ P+L++ L+ I + G H CAV
Sbjct: 161 ------QHQVFVWGGTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAV 214
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+ GDL+ WG+G+ FG+LG G+ + PK +N L+ I V + G H + TS +
Sbjct: 215 SKGGDLFVWGNGS--FGVLGTGDTNNVDTPKCLN-TLDKIAVVDVVTGEKHACIKTSQHE 271
Query: 204 LFTFGDGTFGVLGHGDRKS---VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
L+ +G G LG G+ +S P + + ACG HT A
Sbjct: 272 LYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLA----------- 320
Query: 261 SNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACG--HSLTVA---- 313
C+S +F+WG GD GRLGHG D + PT + AL + + G HS V
Sbjct: 321 --CTSSTVFSWGSGDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVIAIPL 378
Query: 314 LTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
+ SG +YT GS GQLG P V G L +FV + CGS H A + S +
Sbjct: 379 MKDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTG-LCDAFVSAVFCGSSHNAAIASDGNL 437
Query: 373 YTWGKGANGRLG 384
YTWG +G LG
Sbjct: 438 YTWGSNKHGALG 449
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 168/360 (46%), Gaps = 40/360 (11%)
Query: 86 RHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC--GEYHTCAV 143
R A + +QG V+ G+ + G+LG G +D +I + ++ V+ G + A
Sbjct: 99 RRIADLEEQGAVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVSTSNGANISFAT 158
Query: 144 TLSGDLYTWGDGTYNFGLLGH----GNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T ++ WG GT GLLG V P+ V L G + S G H V+
Sbjct: 159 THQHQVFVWG-GT-GVGLLGFTSSSKQNVMFETPQLVE-ELNGEEIIKTSIGSSHACAVS 215
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G LF +G+G+FGVLG GD +V P+ + +L + AVV+V+ G
Sbjct: 216 KGGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKI-------------AVVDVVTGEKH 262
Query: 260 SS-NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV---ACGHSLTVALT 315
+ S +L+ WG GRLG G+ + + + + P +V ACG T+A T
Sbjct: 263 ACIKTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLACT 322
Query: 316 TSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFVEEIACGSYH------VAVLT 367
+S V++ GS G+LG+ +D P + L S V ++ G++H + ++
Sbjct: 323 SST-VFSWGSGDGGRLGHGSDCSDRWEPTEIVA-LKGSHVLDLGAGTWHSACVIAIPLMK 380
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
+YTWG G G+LG G ++P+LV L D V ++ CG++ AAI L+ W
Sbjct: 381 DSGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYTW 440
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
R+ S V + G+ H VF WG G G G LG GS + + +
Sbjct: 300 IRMPTSEKVRFIACGAEHTLACTSSTVFSWGSGDG-GRLGH-----GSDCSDRWEPTEIV 353
Query: 69 ALESAVVLDVQNIACGGRHAA------LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
AL+ + VLD + G H+A L+ G +++WG G+LG G P L+
Sbjct: 354 ALKGSHVLD---LGAGTWHSACVIAIPLMKDSGWLYTWGSGYQGQLGQGTVCKSSTPALV 410
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG 163
L + + V CG H A+ G+LYTWG + G LG
Sbjct: 411 TGLCDAFVSAVFCGSSHNAAIASDGNLYTWGSNKH--GALG 449
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 15/215 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC 135
++ I CG H+ ++K GE+F+WG+ G+LG G + + P++++ LS + + ++
Sbjct: 153 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 212
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
GE H+ A+++SG++Y+WG + G LG G+ + P + L+ V ++CG HT
Sbjct: 213 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 269
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A++T +G +FTFGDG +G LGH ++ PR V L G R + ACG HT A V
Sbjct: 270 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV---- 325
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+GK+F++G G +G+LG+G +L+P
Sbjct: 326 -------SDTGKVFSFGSGKEGQLGNGGTRNQLIP 353
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I M I + GE H ++ G + Y + + H R
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFE-----YKYS-------IEH---ARFQC 147
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRT 237
L+ ++ I+CG +H+ ++ G+LF +G G LG G S S P VE+L G+
Sbjct: 148 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 207
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
V+ + G H+ A+ SG +++WG D G+LG G K P+C+ AL
Sbjct: 208 VQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD 255
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ +ACG T LT SG V+T G YGQLG+ +L R+ L + V +IA
Sbjct: 256 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 315
Query: 358 CGSYHVAVLTSKT-EVYTWGKGANGRLGHGDTDDRNSP 394
CG H S T +V+++G G G+LG+G T ++ P
Sbjct: 316 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 353
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 13/196 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ DG LG VG F +S P+ +E+ + + I+ G H+ ++
Sbjct: 171 GELFAWGQNL-DGQLG-----VGRIFA---STSTPEIVENLSGVPLVQISAGEAHSMALS 221
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V+SWG G+LG G + P I+AL + +E +ACG HT +T SG ++T+
Sbjct: 222 MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTF 281
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
GDG Y G LGH + + P+ V G L G V+ I+CG HT A V+ G++F+FG G
Sbjct: 282 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 338
Query: 212 FGVLGHGDRKSVSIPR 227
G LG+G ++ IPR
Sbjct: 339 EGQLGNGGTRNQLIPR 354
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + + H + L
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 150
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
NI + CG+YH+ A++ G+L+ WG G LG G + + L G+ +
Sbjct: 151 EKNIIQITCGDYHSLALSKGGELFAWGQNLD--GQLGVGRIFASTSTPEIVENLSGVPLV 208
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G G LG G + P +E+L + ACG H
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 268
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + SG +FT+GDG G+LGH + +L P V LV ++AC
Sbjct: 269 TALLTK------------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 316
Query: 307 GHSLTVA-LTTSGHVYTMGSPVYGQLGN 333
G T+A ++ +G V++ GS GQLGN
Sbjct: 317 GRQHTLAYVSDTGKVFSFGSGKEGQLGN 344
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 27/237 (11%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ + S+ G H V++S G+ F + + S+ R L+ ++ C
Sbjct: 112 MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 159
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G +H+ A+ G+LF WG G+LG G A P V L
Sbjct: 160 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 207
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS 360
+++ G + ++AL+ SG+VY+ G GQLG K P+ +E L VE +ACG
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGG 266
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H A+LT V+T+G G G+LGH T + P LV L +V IACG T A
Sbjct: 267 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 323
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFV 353
L E N ++ CG ++AL+ G ++ G + GQLG + A P VE LS +
Sbjct: 149 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LSGVPL 207
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+I+ G H L+ VY+WG+ G+LG G T ++ SPS +EAL D++V+ +ACG
Sbjct: 208 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 267
Query: 414 FTAAI 418
TA +
Sbjct: 268 HTALL 272
>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
Length = 286
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 117/239 (48%), Gaps = 13/239 (5%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
IS G HT + + + ++G G G LGHGD + +P V +L G CG HT
Sbjct: 19 ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG 307
A + S +++WG GD GRLGHG+ +P + L ++ACG
Sbjct: 79 TAYSD-----------SRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACG 127
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
S +A+T +G V + G GQLG D P RV+ + V+ ++CG H +
Sbjct: 128 DSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQ-VSCGWRHTVAI 186
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVS 425
T K+ V++WG+G +G+LGHGD DRN P L+EAL T+ T + W+S
Sbjct: 187 TGKSNVFSWGRGTSGQLGHGDILDRNMPVLIEALSVDGSACEQIQTSKTTVLSGSSWIS 245
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 16/217 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
I+ G H + V SWG G+LGHG D P + AL I V CG HT
Sbjct: 19 ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78
Query: 141 CAVTLSG-DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
A + S +Y+WG G +FG LGHGN ++P + L+G+ + I+CG H VT
Sbjct: 79 TAYSDSRLVVYSWGWG--DFGRLGHGNSSDLFIPHAIK-TLQGLQIKQIACGDSHCLAVT 135
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G++ ++G G LG GD S P+ V+ V+ +CG HT A+ +
Sbjct: 136 INGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAI-------TG 188
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
SN +F+WG G G+LGHGD + +P + AL
Sbjct: 189 KSN-----VFSWGRGTSGQLGHGDILDRNMPVLIEAL 220
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 17/218 (7%)
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+ L++ G HT A+ + +WG G G LGHG+ +P V+ L+G ++S+
Sbjct: 16 VLLISAGASHTVALVAGNLVCSWGRG--EDGQLGHGDAEDRPMPTFVSA-LDGCEITSVI 72
Query: 190 CGPWH-TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
CG H TA S ++++G G FG LGHG+ + IP +++L+GL+ + ACG H
Sbjct: 73 CGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCL 132
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGH 308
AV +G++ +WG G+LG GD P V E +V+CG
Sbjct: 133 AVT------------INGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGW 180
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVE 345
TVA+T +V++ G GQLG+ D +P +E
Sbjct: 181 RHTVAITGKSNVFSWGRGTSGQLGHGDILDRNMPVLIE 218
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V+ WG G R+G G D +P A+++ L ++ IACG H V
Sbjct: 88 VYSWGWGD--------FGRLG--HGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTIN 137
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GEV SWG G+LG G + D P+ + + + V+CG HT A+T ++++WG
Sbjct: 138 GEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSWGR 197
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
GT G LGHG+ + +P + E + V +C T+ T
Sbjct: 198 GTS--GQLGHGDILDRNMPVLI----EALSVDGSACEQIQTSKTT 236
>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
guttata]
Length = 526
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 143/302 (47%), Gaps = 27/302 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G + EVF G G LG G + P+ +D+L I AC Y H
Sbjct: 30 AGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKI---ACLSYGSGPH 86
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G++YTWG Y+ LG+G +VP +V+ L V ++CG H+ V+T
Sbjct: 87 VVLATEEGEVYTWGHNAYS--QLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLT 144
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G+++T+G G +G G + IPR V S L+ V ACG + AVVE
Sbjct: 145 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVE------ 198
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G + P +AAL RVACG++ T+ LT G
Sbjct: 199 ------NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 252
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTW 375
+Y G+ YGQLG +++ P V + K V EI AC S H A T +VY W
Sbjct: 253 QIYAWGANSYGQLGTGNKSNQSYPTTV--VVDKDRVIEIAACHSAHTSAAKTQSGQVYMW 310
Query: 376 GK 377
G+
Sbjct: 311 GQ 312
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 142/291 (48%), Gaps = 28/291 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D V G+N G C G M S++ P+ L+S L + IAC G H L ++GEV
Sbjct: 41 DEVFVLGMNCSG-CLGTGDMQSTIEPRRLDS---LCGKKIACLSYGSGPHVVLATEEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++WG + +LG+G + P + L N + VACG +H+ +T G++YTWG
Sbjct: 97 YTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV L+ V +I+CG + V G+++ +G G LG
Sbjct: 156 -NSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSY 262
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G+LG G+K + PT V + + +A HS + A T SG VY G
Sbjct: 263 GQLGTGNKSNQSYPTTV-VVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 312
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG G+ S P+R++ L G ++ +S G H + T G+++T+G + LG+G
Sbjct: 52 GCLGTGDMQSTIEPRRLDS-LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 110
Query: 219 DRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
+P +V + L + + ACG H+ + S G+++TWG + G
Sbjct: 111 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLT------------SDGEVYTWGYNNSG 158
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
++G G + +P V + ++ +ACG ++A+ +G VY G GQLG
Sbjct: 159 QVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSS 218
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
+ P R+ L V+ +ACG H VLT + ++Y WG + G+LG G+ +++ P+
Sbjct: 219 GNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 277
Query: 396 LVEALKDKQVKSIACGTNFTAA 417
V KD+ ++ AC + T+A
Sbjct: 278 TVVVDKDRVIEIAACHSAHTSA 299
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T ++F G G LG GD +S PR ++SL G + AC + + V +
Sbjct: 38 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKI---ACLSYGSGPHVVLAT--- 91
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTS 317
G+++TWG +LG+G VP V+ LV VACG ++ LT+
Sbjct: 92 -----EEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSD 146
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G VYT G GQ+G+ A+ +P RV L V IACG + EVY WG
Sbjct: 147 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWG 206
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
NG+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 207 YNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD-VQNIACGGRHAALV 91
G+V+ WG +VGS G + +P+ + S + V NIACG + V
Sbjct: 147 GEVYTWGYNNS--------GQVGS--GSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAV 196
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ GEV+ WG G+LG G + P I AL + ++ VACG HT +T G +Y
Sbjct: 197 VENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYA 256
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGD 209
WG +Y G LG GN+ + P V + + + +C HT A T +GQ++ +G
Sbjct: 257 WGANSY--GQLGTGNKSNQSYPTTVVVDKDRV-IEIAACHSAHTSAAKTQSGQVYMWGQ 312
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 15/215 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC 135
++ I CG H+ ++K GE+F+WG+ G+LG G + + P++++ LS + + ++
Sbjct: 148 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 207
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
GE H+ A+++SG++Y+WG + G LG G+ + P + L+ V ++CG HT
Sbjct: 208 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHT 264
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A++T +G +FTFGDG +G LGH ++ PR V L G R + ACG HT A V
Sbjct: 265 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV---- 320
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+GK+F++G G +G+LG+G +L+P
Sbjct: 321 -------SDTGKVFSFGSGKEGQLGNGGTRNQLIP 348
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I M I + GE H ++ G + Y + + H R
Sbjct: 98 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFE-----YKYS-------IEH---ARFQC 142
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRT 237
L+ ++ I+CG +H+ ++ G+LF +G G LG G S S P VE+L G+
Sbjct: 143 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 202
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
V+ + G H+ A+ SG +++WG D G+LG G K P+C+ AL
Sbjct: 203 VQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD 250
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ +ACG T LT SG V+T G YGQLG+ +L R+ L + V +IA
Sbjct: 251 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 310
Query: 358 CGSYHVAVLTSKT-EVYTWGKGANGRLGHGDTDDRNSP 394
CG H S T +V+++G G G+LG+G T ++ P
Sbjct: 311 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 348
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 13/196 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ DG LG VG F +S P+ +E+ + + I+ G H+ ++
Sbjct: 166 GELFAWGQNL-DGQLG-----VGRIFA---STSTPEIVENLSGVPLVQISAGEAHSMALS 216
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V+SWG G+LG G + P I+AL + +E +ACG HT +T SG ++T+
Sbjct: 217 MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTF 276
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
GDG Y G LGH + + P+ V G L G V+ I+CG HT A V+ G++F+FG G
Sbjct: 277 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 333
Query: 212 FGVLGHGDRKSVSIPR 227
G LG+G ++ IPR
Sbjct: 334 EGQLGNGGTRNQLIPR 349
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + + H + L
Sbjct: 98 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 145
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
NI + CG+YH+ A++ G+L+ WG G LG G + + L G+ +
Sbjct: 146 EKNIIQITCGDYHSLALSKGGELFAWGQNLD--GQLGVGRIFASTSTPEIVENLSGVPLV 203
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G G LG G + P +E+L + ACG H
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCH 263
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + SG +FT+GDG G+LGH + +L P V LV ++AC
Sbjct: 264 TALLTK------------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 311
Query: 307 GHSLTVA-LTTSGHVYTMGSPVYGQLGN 333
G T+A ++ +G V++ GS GQLGN
Sbjct: 312 GRQHTLAYVSDTGKVFSFGSGKEGQLGN 339
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 27/237 (11%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ + S+ G H V++S G+ F + + S+ R L+ ++ C
Sbjct: 107 MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 154
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G +H+ A+ G+LF WG G+LG G A P V L
Sbjct: 155 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 202
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS 360
+++ G + ++AL+ SG+VY+ G GQLG K P+ +E L VE +ACG
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGG 261
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H A+LT V+T+G G G+LGH T + P LV L +V IACG T A
Sbjct: 262 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 318
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFV 353
L E N ++ CG ++AL+ G ++ G + GQLG + A P VE LS +
Sbjct: 144 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LSGVPL 202
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+I+ G H L+ VY+WG+ G+LG G T ++ SPS +EAL D++V+ +ACG
Sbjct: 203 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGC 262
Query: 414 FTAAI 418
TA +
Sbjct: 263 HTALL 267
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 152/315 (48%), Gaps = 21/315 (6%)
Query: 70 LESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
L +V+ +AC G A V K EVF++G LG G L P+ I+ L
Sbjct: 16 LADDLVVSGVKLACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGL 75
Query: 126 SNMNIELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ +A G H A T +G++Y+WG Y LG+G +P R+ G L
Sbjct: 76 CKKGMFALAFGSGPHVVAATENGEIYSWGHNGY--CQLGNGTTNQGLLPHRITGNLGSCK 133
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACG 243
+S I+CG H+ V+T G++F +G G +G G ++S PR+V S L G R V ACG
Sbjct: 134 ISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACG 193
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
+ AVV+ SG+++ WG G+LG G+ + P V++L +
Sbjct: 194 QTSSLAVVD------------SGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQ 241
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
ACG++ ++AL+ G++YT G+ YGQLG G+ F++ A H+
Sbjct: 242 AACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCGAAKIGESIGRFIDIAATHYAHI 301
Query: 364 -AVLTSKTEVYTWGK 377
A +T +VY WG+
Sbjct: 302 SAAMTQTGKVYMWGQ 316
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 134/282 (47%), Gaps = 27/282 (9%)
Query: 52 NRVGSCFGV--KMDSSLPKALESAVVLDVQNIACG-GRHAALVNKQGEVFSWGEESGGRL 108
N +C G+ M S P+ +E + +A G G H + GE++SWG +L
Sbjct: 52 NNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYCQL 111
Query: 109 GHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G+G + L P I L + I +ACG +H+ +T G+++ WG N G +G G
Sbjct: 112 GNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYN--NCGQVGSGAT 169
Query: 168 VSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPR 227
+ P++V L G V SI+CG + V +G+++ +G G LG G+ + P
Sbjct: 170 ANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPC 229
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
+V SL GL +AACG H+ A+ + G ++TWG G+LG G+K
Sbjct: 230 KVSSLNGLIISQAACGYAHSMALSD------------EGNIYTWGANSYGQLGTGNK--- 274
Query: 288 LVPTCVAALVEPN---FCRVACGH--SLTVALTTSGHVYTMG 324
C AA + + F +A H ++ A+T +G VY G
Sbjct: 275 -ANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS-LTVAL 314
GN + ++F +G+ LG GD + L P + L + +A G VA
Sbjct: 35 GNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAA 94
Query: 315 TTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T +G +Y+ G Y QLGN + G LP+R+ G L + +IACGS+H VLT + EV+
Sbjct: 95 TENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVF 154
Query: 374 TWGKGANGRLGHGDTDDRNSP-SLVEALKDKQVKSIACGTNFTAAI 418
WG G++G G T + ++P +V L K+V SIACG + A+
Sbjct: 155 AWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAV 200
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--KGLRTVRAACGVWHTAAVVEVMV 255
VT ++F FG+ LG GD S PR++E L KG+ + G H A E
Sbjct: 41 VTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGP-HVVAATE--- 96
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVAL 314
+G++++WG +LG+G L+P + L ++ACG ++ L
Sbjct: 97 ---------NGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVL 147
Query: 315 TTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
T G V+ G GQ+G+ A+ P +V L V IACG + EVY
Sbjct: 148 TDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVY 207
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
WG NG+LG G+ ++ SP V +L + ACG + A+
Sbjct: 208 GWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMAL 252
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE-GIHVSSISCGPWHTAVVTS 200
A+ ++ D + G + LG G+ +S P+++ G + G+ + GP H T
Sbjct: 38 AIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGP-HVVAATE 96
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+++++G + LG+G +P + +L + + ACG H+ + +
Sbjct: 97 NGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD------- 149
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCRVACGHSLTVALTTSG 318
G++F WG + G++G G P V+ L +ACG + ++A+ SG
Sbjct: 150 -----RGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSG 204
Query: 319 HVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VY G GQLG + P +V L+ + + ACG H L+ + +YTWG
Sbjct: 205 EVYGWGYNGNGQLGLGNNVNQPSPCKVS-SLNGLIISQAACGYAHSMALSDEGNIYTWGA 263
Query: 378 GANGRLGHGD 387
+ G+LG G+
Sbjct: 264 NSYGQLGTGN 273
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 13/136 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
G+VF WG +VGS G + S P+ + S + V +IACG + V
Sbjct: 151 GEVFAWGYNN--------CGQVGS--GATANISTPRKVVSVLGGKRVVSIACGQTSSLAV 200
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEV+ WG G+LG G + + P + +L+ + I ACG H+ A++ G++YT
Sbjct: 201 VDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYT 260
Query: 152 WGDGTYNFGLLGHGNE 167
WG +Y G LG GN+
Sbjct: 261 WGANSY--GQLGTGNK 274
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 143/302 (47%), Gaps = 27/302 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G + EVF G G LG G + P+ +D+L I AC Y H
Sbjct: 35 AGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKI---ACLSYGSGPH 91
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G++YTWG Y+ LG+G +VP +V+ L V ++CG H+ V+T
Sbjct: 92 VVLATEEGEVYTWGHNAYS--QLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLT 149
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G+++T+G G +G G + IPR V S L+ V ACG + AVVE
Sbjct: 150 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVE------ 203
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G + P +AAL RVACG++ T+ LT G
Sbjct: 204 ------NGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 257
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTW 375
+Y G+ YGQLG +++ P V + K V EI AC S H A T +VY W
Sbjct: 258 QIYAWGANSYGQLGTGNKSNQSYPTTV--VVDKDRVIEIAACHSAHTSAAKTQSGQVYMW 315
Query: 376 GK 377
G+
Sbjct: 316 GQ 317
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 142/291 (48%), Gaps = 28/291 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D V G+N G C G M S++ P+ L+S L + IAC G H L ++GEV
Sbjct: 46 DEVFVLGMNCSG-CLGTGDMQSTIEPRRLDS---LCGKKIACLSYGSGPHVVLATEEGEV 101
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
++WG + +LG+G + P + L N + VACG +H+ +T G++YTWG
Sbjct: 102 YTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYN- 160
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV L+ V +I+CG + V G+++ +G G LG
Sbjct: 161 -NSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLG 219
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 220 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSY 267
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G+LG G+K + PT V + + +A HS + A T SG VY G
Sbjct: 268 GQLGTGNKSNQSYPTTV-VVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 317
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 130/262 (49%), Gaps = 18/262 (6%)
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG G+ S P+R++ L G ++ +S G H + T G+++T+G + LG+G
Sbjct: 57 GCLGTGDMQSTIEPRRLDS-LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 115
Query: 219 DRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
+P +V + L + + ACG H+ + S G+++TWG + G
Sbjct: 116 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLT------------SDGEVYTWGYNNSG 163
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQ 335
++G G + +P V + ++ +ACG ++A+ +G VY G GQLG
Sbjct: 164 QVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSS 223
Query: 336 ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPS 395
+ P R+ L V+ +ACG H VLT + ++Y WG + G+LG G+ +++ P+
Sbjct: 224 GNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT 282
Query: 396 LVEALKDKQVKSIACGTNFTAA 417
V KD+ ++ AC + T+A
Sbjct: 283 TVVVDKDRVIEIAACHSAHTSA 304
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T ++F G G LG GD +S PR ++SL G + AC + + V +
Sbjct: 43 TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKI---ACLSYGSGPHVVLAT--- 96
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTS 317
G+++TWG +LG+G VP V+ LV VACG ++ LT+
Sbjct: 97 -----EEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSD 151
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G VYT G GQ+G+ A+ +P RV L V IACG + EVY WG
Sbjct: 152 GEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWG 211
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
NG+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 212 YNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 253
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD-VQNIACGGRHAALV 91
G+V+ WG +VGS G + +P+ + S + V NIACG + V
Sbjct: 152 GEVYTWGYNNS--------GQVGS--GSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAV 201
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ GEV+ WG G+LG G + P I AL + ++ VACG HT +T G +Y
Sbjct: 202 VENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYA 261
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGD 209
WG +Y G LG GN+ + P V + + + +C HT A T +GQ++ +G
Sbjct: 262 WGANSY--GQLGTGNKSNQSYPTTVVVDKDRV-IEIAACHSAHTSAAKTQSGQVYMWGQ 317
>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 419
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 171/365 (46%), Gaps = 48/365 (13%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEY 138
+++CGG H + + G VF+ G G+LG G L P + +++ A G +
Sbjct: 71 SLSCGGAHTLFLTEGGRVFATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISA-GNH 129
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTA 196
H+CAVT G+L+ WG + G LG G V P++V+ L + V + G H+
Sbjct: 130 HSCAVTADGELFVWGKNSS--GQLGLGKSAGKVVSTPRKVD-YLADVRVKMTALGSEHSI 186
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHT 247
VVT G+ ++G G LGHG + S PR +++L G++ R A G+ H+
Sbjct: 187 VVTEDGEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHS 246
Query: 248 AAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VAC 306
A + E G +F +G + LG + + P+ V E F VAC
Sbjct: 247 ACIDE------------KGTVFIFGQKTEKVLGRSNDAPR--PSVVE---EIQFSEEVAC 289
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G T A+T G +Y+ GS G LG + P V L K V +++CG H AV
Sbjct: 290 GGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPEVVSSSLFKLPVSKVSCGWKHTAV 349
Query: 366 LTSKTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
++ + ++YTWG G + G+LGHG+ D P +VE K+ + ++CG N
Sbjct: 350 ISGE-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVHVSCGFN 408
Query: 414 FTAAI 418
T AI
Sbjct: 409 HTGAI 413
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/335 (31%), Positives = 144/335 (42%), Gaps = 36/335 (10%)
Query: 100 WGEESGGRLGHGVDSDVLHPK---LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
WG GRLG G P A ++CG HT +T G ++ G
Sbjct: 36 WGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRVFA--TGL 93
Query: 157 YNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+FG LG G+ + H + P V+G E V IS G H+ VT+ G+LF +G + G L
Sbjct: 94 NDFGQLGIGSSMPHTLDPVEVSGFHE--KVVQISAGNHHSCAVTADGELFVWGKNSSGQL 151
Query: 216 GHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
G G K VS PR+V+ L +R A G H+ V E G+ +WG
Sbjct: 152 GLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTE------------DGEALSWGA 199
Query: 274 GDKGRLGHGDKEAKL---------VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
GRLGHG K + L P + L R+A G + + G V+ G
Sbjct: 200 AGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFG 259
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
LG D P+ VE F EE+ACG YH +T + ++Y+WG NG LG
Sbjct: 260 QKTEKVLGRSN-DAPRPSVVE---EIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLG 315
Query: 385 HGDTDDRNSPSLV-EALKDKQVKSIACGTNFTAAI 418
G T P +V +L V ++CG TA I
Sbjct: 316 LGGTGMVRFPEVVSSSLFKLPVSKVSCGWKHTAVI 350
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 123/238 (51%), Gaps = 24/238 (10%)
Query: 27 DDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGR 86
+DG+AL WG G G LG G F + + P+ +++ + ++ IA G
Sbjct: 190 EDGEALS----WG-AAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGML 244
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H+A ++++G VF +G+++ LG +D P +++ + E VACG YHTCAVT
Sbjct: 245 HSACIDEKGTVFIFGQKTEKVLGR--SNDAPRPSVVEEIQFS--EEVACGGYHTCAVTDR 300
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
GDLY+WG + G LG G P+ V+ L + VS +SCG HTAV+ S ++T
Sbjct: 301 GDLYSWG--SNENGCLGLGGTGMVRFPEVVSSSLFKLPVSKVSCGWKHTAVI-SGEDIYT 357
Query: 207 FG----DGTF--------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+G +GTF G LGHG+ P VE K R V +CG HT A++E
Sbjct: 358 WGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVHVSCGFNHTGAILE 415
>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 608
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 187/411 (45%), Gaps = 54/411 (13%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD---VQNIACGGR 86
D +++ WG GT D LG G D++LP+ + + + + ++CGG
Sbjct: 225 DVEQELWSWGAGT-DAQLGTGRLE---------DNNLPQLVRTPSLSSAPAISFLSCGGA 274
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H + G V +WG + G+LG G LHPK + L + I V+ G H+ V+
Sbjct: 275 HVIALTAGGGVLTWGRGNSGQLGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDE 334
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV---TSAGQ 203
G LYT GDG+ FG LGHG+ P+ V HV I+CG H+ + +S Q
Sbjct: 335 GKLYTCGDGS--FGQLGHGDYQLRCFPEEVLF-FSDKHVDKIACGMRHSLALVKGSSGEQ 391
Query: 204 LFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++ FG G G LG + ++V++P +L+ V A G H+AA+
Sbjct: 392 VYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAAL------------ 439
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
+ G L+TWG G K + P+ +F +VA G + + LT G +Y
Sbjct: 440 SAEGHLYTWGRGFKSTSDVYSPQHLPSPS--------SFSKVALGWNHALVLTDEGELYM 491
Query: 323 MGSPVYGQLGNPQ---------ADGKLPN-RVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
+G +G L + + D + N + LS V +IA G+ H ++T V
Sbjct: 492 LGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGV 551
Query: 373 YTWGKGANGRLGHGDTDDRNSPSLVEA-LKDKQVK---SIACGTNFTAAIC 419
TWG G +G+LG GDT D +P V LK + + CG+ FT A+
Sbjct: 552 KTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVA 602
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 109/258 (42%), Gaps = 41/258 (15%)
Query: 78 VQNIACGGRHA-ALVNKQG--EVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELV 133
V IACG RH+ ALV +V+ +G G+LG ++ P L L I +
Sbjct: 370 VDKIACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGI 429
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A G H+ A++ G LYTWG G + + + P+ + P S ++ G
Sbjct: 430 AAGGDHSAALSAEGHLYTWGRGFKSTSDV--------YSPQHLPSPSS---FSKVALGWN 478
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSV--SIP--------REVESLKGLRTVRAACG 243
H V+T G+L+ G G L + + S+P + V +L G++ + A G
Sbjct: 479 HALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAG 538
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF-- 301
H+ V E G + TWG G+ G+LG GD P V ++
Sbjct: 539 AEHSVIVTE------------DGGVKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTA 586
Query: 302 --CRVACGHSLTVALTTS 317
+V CG TVA+ TS
Sbjct: 587 YDVKVYCGSGFTVAVATS 604
>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
Length = 606
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 165/342 (48%), Gaps = 36/342 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN--IELVACGEYHTCAVTLSGDLYTWGD 154
+F+WG +LG G PKL+ L+ + I V+ G H A+ +G L+TWG
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
+ L G +V + P RV+ L+ + ++CG + +A ++ ++FT+G G+ G
Sbjct: 240 CDHGRLGLKSGKDVPY--PTRVDF-LKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296
Query: 215 LGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG 274
LGH ++ +PR V +L + V+ A G H AA+ G ++TWG+G
Sbjct: 297 LGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAAL------------SLDGDVYTWGEG 344
Query: 275 DKGRLGHGDKEAKLVPTCVAALVEPNFCRVA---------CGHSLTVALTTSGHVYTMGS 325
+ G+LGHGD + P + +E VA CG S+T+ LT G + + G
Sbjct: 345 EHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGM 404
Query: 326 PVYGQLG-NPQADGKLPNRVEGKL--SKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
+G LG + P+ + ++ + FV ++ G H A +TSK VYTWG+G G
Sbjct: 405 SEFGALGLGEKRLAARPHLITSRIMDKRRFVH-LSAGDEHCAAVTSKGNVYTWGQGCFGA 463
Query: 383 LG------HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G + + D P +E DK+ + +CG N+T +
Sbjct: 464 VGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVIL 505
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 166/378 (43%), Gaps = 70/378 (18%)
Query: 13 LSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKA-- 69
L + + S G+ H D+ G +F WG L G G+K +P
Sbjct: 211 LGNGIIDVSYGADHGAAIDSTGKLFTWG-----------LCDHGR-LGLKSGKDVPYPTR 258
Query: 70 ---LESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
L+ V++DV CG +A ++ +VF+WG S G+LGH SD P+ + AL
Sbjct: 259 VDFLKDEVIVDV---TCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALH 315
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI--H 184
++ I VA G H A++L GD+YTWG+G + G LGHG+ S PK++ LE
Sbjct: 316 HIPIVQVALGYEHMAALSLDGDVYTWGEGEH--GQLGHGDLNSCSTPKKLLLELENTTGE 373
Query: 185 VSSI------SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES--LKGLR 236
V+ + +CG T ++T G+L +FG FG LG G+++ + P + S + R
Sbjct: 374 VADVGSPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRR 433
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTC--- 292
V + G H AAV S G ++TWG G G +G + A P C
Sbjct: 434 FVHLSAGDEHCAAVT------------SKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKP 481
Query: 293 --VAALVEPNFCRVACGHSLTVALTTSGHVYTMGS------PVYGQLGNPQADGKLPNRV 344
+ ++ C +CG + TV L+ G V +G P+ NP + K
Sbjct: 482 YKLELPLDKRACATSCGGNYTVILSKDGCVLVLGDDSTEIRPMLYDESNPASVMK----- 536
Query: 345 EGKLSKSFVEEIACGSYH 362
+ CG YH
Sbjct: 537 --------ASSVLCGRYH 546
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALVE--PNFCRVACGHSLTVALTTSGHVYTMGS 325
LF WG +LG G +A+ P V+ L V+ G A+ ++G ++T G
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239
Query: 326 PVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+G+LG D P RV+ L + ++ CG Y A ++ +V+TWG G+ G+LG
Sbjct: 240 CDHGRLGLKSGKDVPYPTRVD-FLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLG 298
Query: 385 HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
H + D P V AL + +A G AA+ L
Sbjct: 299 HVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSL 334
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 145/290 (50%), Gaps = 30/290 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+V++WG + ++ G ++ PK S D Q I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKILQ----------PKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K + + +I+ V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN + PK + GPL+G V +S G H+A VT G+L+T+G+G
Sbjct: 481 SWGDGDY--GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
FG LGHGD S +IP V+ + + V +CG HT A+ + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+G GD G+LGHGD P + AL +V G ++ALT++G V
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 127/238 (53%), Gaps = 21/238 (8%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV--ESLKGLRTVRAACGV 244
+I G + T V+++ G + G G++G LG GD + S +++ E + ++ V ++ G
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 245 -WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT A + G++F+WGDGD G+LGHG+ + P + ++
Sbjct: 467 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSY 361
V+ G+ + A+T G +YT G +G+LG+ ++ + +P V+ S V E++CGS
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSS 571
Query: 362 HVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H L+ V+++G G NG+LGHGDT+ P ++EAL+ ++ + G+ + A+
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLAL 629
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+V+ +++ +G + L G ++ + P+ S +T+ A G + T +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVI------ 418
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN--FCRVAC-----GHS 309
+ G + G G GRLG GD + T EP+ +V+ GH
Sbjct: 419 ------STDGSVRACGKGSYGRLGLGDSNNQ--STLKKLTFEPHRSIKKVSSSKGSDGH- 469
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T+A TT G V++ G YG+LG+ + K P ++G L V ++ G H A +T
Sbjct: 470 -TLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
E+YTWG+G GRLGHGD++ RN P+LV+ + + V ++CG++ T A+
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 21/191 (10%)
Query: 19 SSSQGSGHDDGDAL-----GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA 73
SSS+GS DG L G+VF WG+G G LG G + K + L+
Sbjct: 461 SSSKGS---DGHTLAFTTEGEVFSWGDGD-YGKLGHGNSSTQ-----KYPKLIQGPLQGK 511
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
VV+ V + G RH+A V + GE+++WGE GRLGHG + P L+ +SN+ V
Sbjct: 512 VVVCV---SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EV 566
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG HT A++ G W G + G LGHG+ + PK + L+G+ + + G
Sbjct: 567 SCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDTNRVYKPKVIEA-LQGMFIRKVCAGSQ 624
Query: 194 HTAVVTSAGQL 204
+ +TS GQ+
Sbjct: 625 SSLALTSTGQV 635
>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
Length = 1698
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/343 (30%), Positives = 167/343 (48%), Gaps = 34/343 (9%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+I+CG H+A V +QG +F +G+ + G+LG + V P + L + VACG H
Sbjct: 38 HISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDH 97
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G++ G + LGH N+ + +R+ + + +S G +A +T
Sbjct: 98 TLVSTSQGEILAAGGNSDGQLGLGHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+LF +GD + G LG G+ +P+E+ + + V +CG H+A V +
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV--SCGYRHSALVTD------- 206
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
SG ++++G+ GRLG + P V +L + +VACG T+AL T
Sbjct: 207 -----SGDVYSFGESADGRLGLSAHQLANHSYPQRVESLH--SVLQVACGGKHTLAL-TE 258
Query: 318 GHVYTMGSPVYGQLGNPQADGKL------PNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
+Y G +GQLG G L P V G K V + CG H A++T
Sbjct: 259 DELYCFGGGEFGQLGL----GTLVFVADSPVAV-GHFRKGRVTHVTCGEQHSALITDSGL 313
Query: 372 VYTWGKGANGRLGHGDTDDRN--SPSLVEALKDKQVKSIACGT 412
+YT+G G +G+LGHGD + N +P++ + + V ++ACG+
Sbjct: 314 LYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGS 356
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 149/302 (49%), Gaps = 40/302 (13%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMN-IELVACG 136
Q++ACG H + QGE+ + G S G+LG G +D + + + + I+L++ G
Sbjct: 88 AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
++ + A+T G L+ WGD + G LG GN+ +PK +N G + +SCG H+A
Sbjct: 148 DHTSAALTEDGRLFLWGDNSA--GQLGFGNDSHALLPKELNM---GQSIHWVSCGYRHSA 202
Query: 197 VVTSAGQLFTFG---DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
+VT +G +++FG DG G+ H + S P+ VESL + ++ ACG HT A+ E
Sbjct: 203 LVTDSGDVYSFGESADGRLGLSAH-QLANHSYPQRVESLHSV--LQVACGGKHTLALTE- 258
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-----PTCVAALVEPNFCRVACGH 308
+L+ +G G+ G+LG G LV P V + V CG
Sbjct: 259 ------------DELYCFGGGEFGQLGLG----TLVFVADSPVAVGHFRKGRVTHVTCGE 302
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVE----EIACGSYHVA 364
+ +T SG +YT G +G+LG+ D N+ + + F E +ACGS H+
Sbjct: 303 QHSALITDSGLLYTFGDGRHGKLGH--GDENFTNQFTPTVCQRFFEYSVMTVACGSSHML 360
Query: 365 VL 366
V
Sbjct: 361 VF 362
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
I+CG H A +T + ++ +G G+LG P V+ LK ++ +S+ACGT+ T
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
>gi|357122920|ref|XP_003563161.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 485
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 144/314 (45%), Gaps = 20/314 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACG 136
V NI+ HAA V + G+VF+ G+ S GHG V + P I+AL + VA G
Sbjct: 156 VVNISAFHNHAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATG 215
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
T +T G +YT G T+ G LGHG+ + PK + V ++ G +T
Sbjct: 216 LSFTVILTREGQVYTCGSNTH--GQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTF 273
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEVM 254
VT G + +FG T LGHGD+ + +PR ++S K + VR + G H A+ +
Sbjct: 274 AVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVALDAL- 332
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G ++TWG G G LGHGD+ K P + +L +V T L
Sbjct: 333 -----------GYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVL 381
Query: 315 TTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTE 371
T G V G +G LG P +D + V L +V +I+ G YH +T+K
Sbjct: 382 TDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNKGI 441
Query: 372 VYTWGKGANGRLGH 385
V+ +G +LG
Sbjct: 442 VFGFGDNERAQLGQ 455
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 136/277 (49%), Gaps = 23/277 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP-KRVNGPLEGIHVSSISCG 191
VA G YHT V D + G+ G+LGHG + + V RV+ P V +IS
Sbjct: 107 VATGRYHTLLVH---DSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALS-RVVNISAF 162
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAV 250
H A VT GQ+FT GD + GHGD +++ P ++E+LKG + A G+ T +
Sbjct: 163 HNHAAFVTETGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEALKGTFCKQVATGLSFTVIL 222
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN--FCRVACGH 308
G+++T G G+LGHGD + P + L E + +VA G
Sbjct: 223 TR------------EGQVYTCGSNTHGQLGHGDTIDRAAPK-IIELFEGSSPVVQVAAGA 269
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEG-KLSKSFVEEIACGSYHVAVL 366
S T A+T G V++ GS LG+ Q + LP ++ K V ++ G H L
Sbjct: 270 SYTFAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAVAL 329
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
+ VYTWG+G G LGHGD +D+ SP L+ +LK +
Sbjct: 330 DALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQ 366
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 152/349 (43%), Gaps = 37/349 (10%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVD-------SDVLHPKLIDALSNMNIELVACGE 137
GR+ L+ V+S G G LGHG D S V P L ++ ++
Sbjct: 110 GRYHTLLVHDSSVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVN------ISAFH 163
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLL-GHGNE-VSHWVPKRVNGPLEGIHVSSISCGPWHT 195
H VT +G ++T GD N L GHG+ + + P ++ L+G ++ G T
Sbjct: 164 NHAAFVTETGQVFTCGD---NSSLCCGHGDVGRTIFRPTQIEA-LKGTFCKQVATGLSFT 219
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR-TVRAACGVWHTAAVVEVM 254
++T GQ++T G T G LGHGD + P+ +E +G V+ A G +T AV +
Sbjct: 220 VILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYTFAVTD-- 277
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--CRVACGHSLTV 312
G + ++G LGHGD+ +L+P + + N RV+ G V
Sbjct: 278 ----------DGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVVRVSAGDEHAV 327
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
AL G+VYT G G LG+ + K + G L ++ VLT + V
Sbjct: 328 ALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARKRKTFVLTDEGSV 387
Query: 373 YTWGKGANGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G G LG D +D P ++++L+ V I+ G T A+
Sbjct: 388 VAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAV 436
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 20/296 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P +E+ + +A G ++ ++G+V++ G + G+LGHG D PK+I+
Sbjct: 198 PTQIEALKGTFCKQVATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFE 257
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
+ + VA G +T AVT G ++++G T NF LGHG++ + +P+ + IH
Sbjct: 258 GSSPVVQVAAGASYTFAVTDDGTVHSFGSCT-NF-CLGHGDQHNELLPRAIQSFKRRNIH 315
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +S G H + + G ++T+G G G LGHGD + P + SLKG V+
Sbjct: 316 VVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELIGSLKGQVAVQVCARK 375
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFC 302
T + + G + +G G LG D+E+ K++ CV + ++
Sbjct: 376 RKTFVLTD------------EGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYV 423
Query: 303 -RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+++ G TVA+T G V+ G QLG G L E KS +E+IA
Sbjct: 424 SQISTGLYHTVAVTNKGIVFGFGDNERAQLGQEYIRGCL-KPTEIMFHKSSMEDIA 478
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 18/225 (8%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWH 246
++ G +HT +V + +++ G GVLGHG + + S L R V + H
Sbjct: 107 VATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCVAFSRVSFPALSRVVNISAFHNH 165
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCR-V 304
A V E +G++FT GD GHGD + PT + AL + FC+ V
Sbjct: 166 AAFVTE------------TGQVFTCGDNSSLCCGHGDVGRTIFRPTQIEAL-KGTFCKQV 212
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYHV 363
A G S TV LT G VYT GS +GQLG+ D P +E S V ++A G+ +
Sbjct: 213 ATGLSFTVILTREGQVYTCGSNTHGQLGHGDTIDRAAPKIIELFEGSSPVVQVAAGASYT 272
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
+T V+++G N LGHGD + P +++ K + + +
Sbjct: 273 FAVTDDGTVHSFGSCTNFCLGHGDQHNELLPRAIQSFKRRNIHVV 317
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
DALG V+ WG G G LG G + D + P+ + S + R
Sbjct: 330 DALGYVYTWGRGYC-GALG---------HGDENDKTSPELIGSLKGQVAVQVCARKRKTF 379
Query: 90 LVNKQGEVFSWGEESGGRLG---HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
++ +G V ++G G LG V+ P ++D+L + ++ G YHT AVT
Sbjct: 380 VLTDEGSVVAFGWMGFGSLGFPDRESSDKVMKPCVLDSLRGHYVSQISTGLYHTVAVTNK 439
Query: 147 GDLYTWGD 154
G ++ +GD
Sbjct: 440 GIVFGFGD 447
>gi|297830122|ref|XP_002882943.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297328783|gb|EFH59202.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 488
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 148/316 (46%), Gaps = 22/316 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVA 134
V ++ H+A V + GEV + G+ S GH +D+ + PKL++ L + VA
Sbjct: 164 QVAQVSATQNHSAFVLQSGEVLTCGDNSSHCCGH-LDTSRPIFRPKLVEVLKGTPCKQVA 222
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G + T ++ G YT G T+ G LGHG+ + PK V V I+ GP +
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTH--GQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSY 280
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVE 252
VT G +++FG G+ LGHG+++ PR +++ K G+ +R + G H A+
Sbjct: 281 VLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALD- 339
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
S+G+++TWG G G LGHGD+ K+ P + L +V T
Sbjct: 340 -----------SNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTF 388
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
L G +Y G +G LG P +D L RV L V +++ G YH V+T
Sbjct: 389 VLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVVTQG 448
Query: 370 TEVYTWGKGANGRLGH 385
++ +G +LGH
Sbjct: 449 GRIFGFGDNERAQLGH 464
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 127/278 (45%), Gaps = 27/278 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV---PKRVNGPLEGIHVSSIS 189
+A G+YHT + S + G G+L HG E + V P P + V+ +S
Sbjct: 116 IATGKYHTLLINNSK---VYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQ---VAQVS 169
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTA 248
H+A V +G++ T GD + GH D + + P+ VE LKG + A G+ T
Sbjct: 170 ATQNHSAFVLQSGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQVAAGLHFTV 229
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNFCRVAC 306
+ G +T G G+LGHGD + P V L + P ++A
Sbjct: 230 FLSR------------EGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGP-VVQIAA 276
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS--FVEEIACGSYHVA 364
G S +A+T G VY+ GS LG+ + +L RV + + ++ G H
Sbjct: 277 GPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAV 336
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
L S VYTWGKG G LGHGD +D+ +P ++ LK+
Sbjct: 337 ALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKN 374
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 110/239 (46%), Gaps = 21/239 (8%)
Query: 59 GVKMDSSLPKALESAV-VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G MD PK +E + V IA G + V + G V+S+G S LGHG D L
Sbjct: 251 GDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDEL 310
Query: 118 HPKLIDALSNMNIEL--VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
P++I A I + V+ G+ H A+ +G +YTWG G G LGHG+E P+
Sbjct: 311 QPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYC--GALGHGDENDKITPQ- 367
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR---KSVSIPREVESL 232
V L+ + T V+ G L+ FG FG LG DR V PR +E L
Sbjct: 368 VLVNLKNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECL 427
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
K R + + G++HT V + G++F +GD ++ +LGH L PT
Sbjct: 428 KPHRVSQVSTGLYHTIVVTQ------------GGRIFGFGDNERAQLGHNSLRGCLEPT 474
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK +E + +A G ++++G ++ G + G+LGHG D PK+++ L
Sbjct: 207 PKLVEVLKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLK 266
Query: 127 NMN-IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIH 184
N+ + +A G + AVT G +Y++G G+ NF LGHG + P+ + +GIH
Sbjct: 267 NIGPVVQIAAGPSYVLAVTQDGSVYSFGSGS-NF-CLGHGEQQDELQPRVIQAFKRKGIH 324
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ +S G H + S G+++T+G G G LGHGD P+ + +LK V+
Sbjct: 325 ILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARK 384
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK---EAKLVPTCVAALVEPNF 301
T +VE G L+ +G G LG D+ + L P + L
Sbjct: 385 RKTFVLVE------------GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRV 432
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL 340
+V+ G T+ +T G ++ G QLG+ G L
Sbjct: 433 SQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCL 471
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 36/353 (10%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL------- 132
IA G H L+N +V+S G G L HG P+ ++ IE
Sbjct: 115 QIATGKYHTLLINNS-KVYSCGVSLSGVLAHG-------PETTQCVAFTPIEFPFPAQVA 166
Query: 133 -VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
V+ + H+ V SG++ T GD + + GH + ++ L+G ++ G
Sbjct: 167 QVSATQNHSAFVLQSGEVLTCGDNSSH--CCGHLDTSRPIFRPKLVEVLKGTPCKQVAAG 224
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL-RTVRAACGVWHTAAV 250
T ++ G +T G T G LGHGD P+ VE LK + V+ A G + AV
Sbjct: 225 LHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYVLAV 284
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP--NFCRVACGH 308
+ G ++++G G LGHG+++ +L P + A + RV+ G
Sbjct: 285 TQ------------DGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGD 332
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
VAL ++G VYT G G LG+ + K+ +V L ++ VL
Sbjct: 333 EHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLKNCLAVQVCARKRKTFVLVE 392
Query: 369 KTEVYTWGKGANGRLGHGD---TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+Y +G G LG D +D P ++E LK +V ++ G T +
Sbjct: 393 GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHRVSQVSTGLYHTIVV 445
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 16/237 (6%)
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP-REVESLKGLRTVRAACGVW 245
I+ G +HT ++ ++ ++++ G GVL HG + + +E + + +
Sbjct: 115 QIATGKYHTLLINNS-KVYSCGVSLSGVLAHGPETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-V 304
H+A V++ SG++ T GD GH D + + +++ C+ V
Sbjct: 174 HSAFVLQ------------SGEVLTCGDNSSHCCGHLDTSRPIFRPKLVEVLKGTPCKQV 221
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
A G TV L+ GH YT GS +GQLG+ D P VE + V +IA G +V
Sbjct: 222 AAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTMDRPAPKVVEFLKNIGPVVQIAAGPSYV 281
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+T VY++G G+N LGHG+ D P +++A K K + + A+ L
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 59 GVKMDSSLPKALESAVV--LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV 116
G + D P+ +++ + + ++ G HA ++ G V++WG+ G LGHG ++D
Sbjct: 304 GEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDK 363
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-VSHWVPK- 174
+ P+++ L N + + C V + G L +G G FG LG + VS V +
Sbjct: 364 ITPQVLVNLKNC-LAVQVCARKRKTFVLVEGGLL-YGFGWMGFGSLGFPDRGVSDKVLRP 421
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
RV L+ VS +S G +HT VVT G++F FGD LGH + P E+
Sbjct: 422 RVLECLKPHRVSQVSTGLYHTIVVTQGGRIFGFGDNERAQLGHNSLRGCLEPTEI 476
>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 658
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 31/290 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF+WG + + G ++ LPK S + Q I G +++
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKI----------LLPKMAISFA--ESQQIEAGQYCTFVISS 423
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K ++ N I ++ + HT A+T G ++
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLN-FDNSIITRISSSKGSDGHTLALTSEGQVF 482
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN ++ PK + G L G V IS G H+A VT GQL+T+G+G
Sbjct: 483 SWGDGDY--GKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGHGD S ++P V+ + + V CG HT AV + S +++
Sbjct: 541 DYGRLGHGDSNSRNVPTLVKDVSNVGKV--VCGSSHTIAVSQ-----------DSRTVWS 587
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHV 320
+G GD G+LGHGD P + +L+ +V CG ++ALT++G V
Sbjct: 588 FGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 148/289 (51%), Gaps = 21/289 (7%)
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
++ +V++ EVF WG S +L G +L PK+ A+S + + G+Y T ++
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSD 424
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLF 205
G + G G+Y G LG G+ + K++N I +SS HT +TS GQ+F
Sbjct: 425 GSVRACGKGSY--GRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVF 482
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
++GDG +G LGHG+ + P+ + L G V + G H+A V +
Sbjct: 483 SWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTD------------ 530
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT-SGHVYTM 323
G+L+TWG+GD GRLGHGD ++ VPT V + N +V CG S T+A++ S V++
Sbjct: 531 DGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQDSRTVWSF 588
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
G G+LG+ + ++ L F++++ CGS LTS +V
Sbjct: 589 GGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQV 637
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
++ V+ + +++ WG + + L G++ +PK E I G + T V+
Sbjct: 367 NSLVVSENSEVFVWGSNSSH--QLAEGSQEKILLPKMAISFAES---QQIEAGQYCTFVI 421
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAACGVWHTAAVVEVMVG 256
+S G + G G++G LG GD + + +++ + R + HT A+
Sbjct: 422 SSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALT----- 476
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-AALVEPNFCRVACGHSLTVALT 315
S G++F+WGDGD G+LGHG+ + P + L+ ++ G+ + +T
Sbjct: 477 -------SEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVT 529
Query: 316 TSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
G +YT G YG+LG+ ++ + +P V+ S V ++ CGS H +AV V+
Sbjct: 530 DDGQLYTWGEGDYGRLGHGDSNSRNVPTLVK---DVSNVGKVVCGSSHTIAVSQDSRTVW 586
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++G G NG+LGHGDT+ P ++E+L +K + CG+ + A+
Sbjct: 587 SFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLAL 631
>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 31/293 (10%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
+VF+WG + + G ++ LPK S + Q I G +++
Sbjct: 376 EVFVWGSNSSHQLAEGSQEKI----------LLPKMAISFA--ESQQIEAGQYCTFVISS 423
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG---EYHTCAVTLSGDLY 150
G V + G+ S GRLG G ++ K ++ N I ++ + HT A+T G ++
Sbjct: 424 DGSVRACGKGSYGRLGLGDSNNQTQLKKLN-FDNSIITRISSSKGSDGHTLALTSEGQVF 482
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WGDG Y G LGHGN ++ PK + G L G V IS G H+A VT GQL+T+G+G
Sbjct: 483 SWGDGDY--GKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTDDGQLYTWGEG 540
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+G LGHGD S ++P V+ + + V CG HT AV + S +++
Sbjct: 541 DYGRLGHGDSNSRNVPTLVKDVSNVGKV--VCGSSHTIAVSQ-----------DSRTVWS 587
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
+G GD G+LGHGD P + +L+ +V CG ++ALT++G + T
Sbjct: 588 FGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTF 640
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 21/294 (7%)
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
++ +V++ EVF WG S +L G +L PK+ A+S + + G+Y T ++
Sbjct: 367 NSLVVSENSEVFVWGSNSSHQLAEGSQEKILLPKM--AISFAESQQIEAGQYCTFVISSD 424
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLF 205
G + G G+Y G LG G+ + K++N I +SS HT +TS GQ+F
Sbjct: 425 GSVRACGKGSY--GRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVF 482
Query: 206 TFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
++GDG +G LGHG+ + P+ + L G V + G H+A V +
Sbjct: 483 SWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVTD------------ 530
Query: 265 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT-SGHVYTM 323
G+L+TWG+GD GRLGHGD ++ VPT V + N +V CG S T+A++ S V++
Sbjct: 531 DGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDV--SNVGKVVCGSSHTIAVSQDSRTVWSF 588
Query: 324 GSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
G G+LG+ + ++ L F++++ CGS LTS ++ T+ K
Sbjct: 589 GGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCTFIK 642
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
++ V+ + +++ WG + + L G++ +PK E I G + T V+
Sbjct: 367 NSLVVSENSEVFVWGSNSSH--QLAEGSQEKILLPKMAISFAES---QQIEAGQYCTFVI 421
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAACGVWHTAAVVEVMVG 256
+S G + G G++G LG GD + + +++ + R + HT A+
Sbjct: 422 SSDGSVRACGKGSYGRLGLGDSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALT----- 476
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV-AALVEPNFCRVACGHSLTVALT 315
S G++F+WGDGD G+LGHG+ + P + L+ ++ G+ + +T
Sbjct: 477 -------SEGQVFSWGDGDYGKLGHGNTLTQKYPKVILGVLMGKVVVCISAGYRHSACVT 529
Query: 316 TSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTEVY 373
G +YT G YG+LG+ ++ + +P V+ S V ++ CGS H +AV V+
Sbjct: 530 DDGQLYTWGEGDYGRLGHGDSNSRNVPTLVK---DVSNVGKVVCGSSHTIAVSQDSRTVW 586
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
++G G NG+LGHGDT+ P ++E+L +K + CG+ + A+
Sbjct: 587 SFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLAL 631
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 13/121 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ WGEG R+G G ++P ++ V +V + CG H V+
Sbjct: 532 GQLYTWGEGD--------YGRLG--HGDSNSRNVPTLVKD--VSNVGKVVCGSSHTIAVS 579
Query: 93 KQGE-VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ V+S+G G+LGHG + + PK+I++L + I+ V CG + A+T +G L T
Sbjct: 580 QDSRTVWSFGGGDNGKLGHGDTNRIYKPKIIESLIGLFIKKVGCGSQSSLALTSTGQLCT 639
Query: 152 W 152
+
Sbjct: 640 F 640
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 135/273 (49%), Gaps = 26/273 (9%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L + I +ACG +HT + + LY++G G GLLG+ + +P+++N + +
Sbjct: 18 LQDKEIIYIACGHHHTLIIDENNQLYSFGMGK--TGLLGNEHLEDVKIPQQLNLKQKFVQ 75
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V+ CG H+ +T +G +F++G G LGHG++ P+EV + CG
Sbjct: 76 VA---CGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEVIQ-NDIIAEYIDCGD 131
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
H+A V + +L+TWG+G RLGHG +L+P V L + V
Sbjct: 132 QHSAFV------------SKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHV 179
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSF-----VEEIA 357
+CG + T+ +T G VY G +YG+LG + LP RV G + K F ++A
Sbjct: 180 SCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRV-GMICKKFRKNKMYYQVA 238
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
GS H L++ +++TWG +G LG G D
Sbjct: 239 AGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKD 271
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 146/297 (49%), Gaps = 29/297 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
IACG H ++++ +++S+G G LG+ DV P+ ++ L ++ VACG H+
Sbjct: 26 IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN-LKQKFVQ-VACGATHS 83
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A+T+SG +++WG G LGHGN+ PK V I I CG H+A V+
Sbjct: 84 LALTISGIIFSWGKNLR--GQLGHGNQNDCLKPKEV--IQNDIIAEYIDCGDQHSAFVSK 139
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
+L+T+G+G + LGHG IP++V L+ +CG+ HT V
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT--------- 190
Query: 261 SNCSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAALVE-----PNFCRVACGHSLTVAL 314
G ++ WGDG G+LG D + + +PT V + + + +VA G ++AL
Sbjct: 191 ---GEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL 247
Query: 315 TTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
+T+G ++T GS G LG + Q P ++ KL+K + Y+ A L
Sbjct: 248 STNGQIFTWGSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKDKNLQFFSLQYYQAEL 304
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 179/423 (42%), Gaps = 52/423 (12%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F WG+ G LG G C K + +++ ++ + I CG +H+A V+
Sbjct: 90 GIIFSWGKNLR-GQLGHG--NQNDCLKPK------EVIQNDIIAEY--IDCGDQHSAFVS 138
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K E+++WG RLGHGV +D L PK + L + + V+CG HT VT G +Y W
Sbjct: 139 KNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYAW 198
Query: 153 GDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGIH----VSSISCGPWHTAVVTSAGQLFTF 207
GDG Y G LG + + +P RV + ++ G H+ +++ GQ+FT+
Sbjct: 199 GDGMY--GKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIFTW 256
Query: 208 GDGTFGVLGHGDRKSV----SIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
G G LG G K + + P+++ L + ++ ++ A + + +++
Sbjct: 257 GSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKDKNLQFFSLQYYQAELNNKLTKAKNNNK 316
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN---FCRVACGHSLTVALTTSGH 319
+ + + + ++ + P+ FC+ + +S +A +G
Sbjct: 317 NQINLNDSLDNIEVIQFKIDMYPLYIIDKQLIQRGPPSNIIFCQASQNNSFFLA--NNGQ 374
Query: 320 VYTMGSPVYGQLGN----------PQADGKLPNRVEGKLS------------KSFVEEIA 357
++ GS G N QA K N ++ L+ + + I+
Sbjct: 375 IFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYIS 434
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACGTNFT 415
C H ++ K + Y WGK +LG G + + N L L+ K + AC F+
Sbjct: 435 CSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDKFS 494
Query: 416 AAI 418
A +
Sbjct: 495 ALL 497
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
++ ++ + +E+E L+ + ACG HT + E + +L+++G
Sbjct: 1 MMNKENKNQIYDIQELE-LQDKEIIYIACGHHHTLIIDE------------NNQLYSFGM 47
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G G LG+ E +P + ++ F +VACG + ++ALT SG +++ G + GQLG+
Sbjct: 48 GKTGLLGNEHLEDVKIPQQLN--LKQKFVQVACGATHSLALTISGIIFSWGKNLRGQLGH 105
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRN 392
Q D P V + E I CG H A ++ E+YTWG G RLGHG T D
Sbjct: 106 GNQNDCLKPKEVIQ--NDIIAEYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDEL 163
Query: 393 SPSLVEALKDKQVKSIACGTNFTAAI 418
P V L+D V ++CG N T +
Sbjct: 164 IPKKVVVLEDYYVTHVSCGMNHTLIV 189
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 141/364 (38%), Gaps = 51/364 (14%)
Query: 79 QNIACGGRHAALVNKQGEVFS--WGEESGGRLGHGVDSDVL---HPKLIDALSNMNIELV 133
Q ACG + Q + S +++ + + +D+D+ P I N I +
Sbjct: 374 QIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIRYI 433
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGP 192
+C H A++ G Y WG Y LG G ++ ++P+++ G LE + +C
Sbjct: 434 SCSYLHAIAISQKGQAYVWGKNIY--YQLGVGYSCNYNYIPQKLQGILETKTIIMSACSD 491
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+A++T G+++TFG GVLGH ++ +P + + ACG ++
Sbjct: 492 KFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIYIACGPQGMVSI-- 549
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLG-------------HGDKEAKLVPTCVAALVEP 299
+ +L+ WG+ G+LG DK K E
Sbjct: 550 ---------SAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEV 600
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP--------QADGKLPNRVEGKLSKS 351
V G +VA+ +G +Y+ G +Y N D + R ++
Sbjct: 601 QIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILIRTNELQNQQ 660
Query: 352 FVEEIACGSYHVAVLT--------SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
F+ +++C YH L+ ++ VY WG G L ++ D + LK K
Sbjct: 661 FI-QVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQD--IVKYYQQLKQK 717
Query: 404 QVKS 407
KS
Sbjct: 718 PQKS 721
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 159/398 (39%), Gaps = 85/398 (21%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV--DSDVLHPKLIDALSNMNIELVAC 135
++ I+C HA ++++G+ + WG+ +LG G + + + KL L I + AC
Sbjct: 430 IRYISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSAC 489
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV---PKRVNGPLEGIHVSSISCGP 192
+ + +T G+++T+ GT + G+LGH E +++V PK VN + I+ I+CGP
Sbjct: 490 SDKFSALLTDKGEVWTF--GTSDCGVLGH-QEKNYYVVPEPKMVNDIPQMIY---IACGP 543
Query: 193 W-HTAVVTSAGQLFTFGDGTFGVLG-HGDRKSVSIPREVESLKG------------LRTV 238
++ QL+ +G+ +G LG R +++ E G ++
Sbjct: 544 QGMVSISAHKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIK 603
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
G++H+ A+ S SG+ + D + D + L+ T L
Sbjct: 604 SVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGI---DDQFILIRT--NELQN 658
Query: 299 PNFCRVACGHSLTVALTT--------SGHVYTMG---------------SPVYGQLGN-P 334
F +V+C T+AL+ +VY G Y QL P
Sbjct: 659 QQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWGLCNLGNLIFENSQDIVKYYQQLKQKP 718
Query: 335 QADGKL--------------------------PNR-VEGKLSKSFVEEIACGSYHVAVLT 367
Q L P+R + + K ++ ++ G +H +
Sbjct: 719 QKSQDLNKYISQKQILLPPTNISLIQKFILTNPDREIINEFYKKSIKYVSAGIFHNIAIG 778
Query: 368 SKTEVYTWGKGANGRLG----HGDTDDRNSPSLVEALK 401
S + + WG NG+LG ++ +N P+ V ++
Sbjct: 779 SDGKCFVWGSFQNGKLGLVVNKQNSKTQNCPTYVPIIQ 816
>gi|390348017|ref|XP_003726917.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Strongylocentrotus
purpuratus]
Length = 1514
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 191/400 (47%), Gaps = 49/400 (12%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVF--SWGEESGGRLGHGVDSDVLHPKLIDA 124
P LES V +AC R ++ + +V+ + E G H L+D
Sbjct: 725 PCMLESLSEFGVVQMACSERCLIVLTRTSKVYLQYFNNEPPG----------FH--LVDG 772
Query: 125 LSNMN-IELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLE 181
LSN + I++ A E H A+T ++Y WG+G G LG GN + P V G P +
Sbjct: 773 LSNKDVIQIAAHPEGKHYLALTADWEVYAWGNG--EGGRLGLGNTSAREDPTLVQGLPSQ 830
Query: 182 --GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR------KSVS------IPR 227
G HV ISCG ++A +TS G+++T+G G +G LGHG+ K VS P+
Sbjct: 831 STGQHVIQISCGSSYSAALTSNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPK 890
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS---SGKLFTWGDGDKGRLGHGDK 284
V + T + G+ + + +G++ + +G LF++G+GD G+LG G
Sbjct: 891 LVSNSDDQLTPKLVSGL-KEQKFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGS 949
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNR 343
+ +P V L + + CG+ +V LT +G VYT G +LG+ + + P
Sbjct: 950 DGCKLPKLVDKLQGQHAVKACCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKM 1009
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT---DDRNSPSLVEAL 400
+E K V+ + G + VA+ S E + WG+ G+LG G+ ++ P+L+E +
Sbjct: 1010 IEALRGKKIVDIQSSGCHTVAIAESG-EFFCWGRNDQGQLGLGEAALKSNKGEPTLIECM 1068
Query: 401 KDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFN 440
+ K++ +ACG T A W S S+ G +PF+
Sbjct: 1069 EGKKLCGLACGVAQTFA-----WTSSAHWSV--GLHVPFS 1101
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 163/362 (45%), Gaps = 61/362 (16%)
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
L+ + EV+ WG G + P ++++LS + +AC E +T + +
Sbjct: 698 LIPQGQEVWGWGLLPFKTTGS--NPTCASPCMLESLSEFGVVQMACSERCLIVLTRTSKV 755
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW--HTAVVTSAGQLFTF 207
Y L NE + V+G L V I+ P H +T+ +++ +
Sbjct: 756 Y----------LQYFNNEPPGF--HLVDG-LSNKDVIQIAAHPEGKHYLALTADWEVYAW 802
Query: 208 GDGTFGVLGHGDRKSVSIPREVESL----KGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
G+G G LG G+ + P V+ L G ++ +CG ++AA+
Sbjct: 803 GNGEGGRLGLGNTSAREDPTLVQGLPSQSTGQHVIQISCGSSYSAALT------------ 850
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA------------------------ALVEP 299
S+G+++TWG G GRLGHG+ + +L P V+ L E
Sbjct: 851 SNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQLTPKLVSNSDDQLTPKLVSGLKEQ 910
Query: 300 NFCRVACGHS--LTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEI 356
F +A G + T+A+T +G +++ G+ YG+LG +DG KLP V+ KL +
Sbjct: 911 KFIHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVD-KLQGQHAVKA 969
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG+ +LT VYTWGKG RLGHG + + P ++EAL+ K++ I T
Sbjct: 970 CCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCHTV 1029
Query: 417 AI 418
AI
Sbjct: 1030 AI 1031
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 11/181 (6%)
Query: 25 GHDDGDALGDV---FIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
G +DG L ++ G GD G L R GS G K LPK ++
Sbjct: 918 GSNDGQTLAVTDTGLLFSFGNGDY---GKLGRGGS-DGCK----LPKLVDKLQGQHAVKA 969
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
CG + + ++ K G V++WG+ G RLGHG + PK+I+AL I + HT
Sbjct: 970 CCGNQFSVILTKTGTVYTWGKGDGHRLGHGSEEHQRFPKMIEALRGKKIVDIQSSGCHTV 1029
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+ SG+ + WG LG S+ + +EG + ++CG T TS+
Sbjct: 1030 AIAESGEFFCWGRNDQGQLGLGEAALKSNKGEPTLIECMEGKKLCGLACGVAQTFAWTSS 1089
Query: 202 G 202
Sbjct: 1090 A 1090
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 158/337 (46%), Gaps = 25/337 (7%)
Query: 42 TGDGV-LGGGLNRVGSCFGVKMDSS--LPKALESAVVLDVQNIAC--GGRHAALVNKQGE 96
T DGV L GLN+ G C D + + +++ V+ IA G H + G
Sbjct: 370 TNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGL 429
Query: 97 VFSWGEESGGRLGH-GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDG 155
+SWG G+LGH + + V PKLI++L + + + +H+ +T SG+LY +G
Sbjct: 430 AYSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFG-- 487
Query: 156 TYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+ G LG + P+ V G EG +S ++CG +HT + T+ G LF G +G L
Sbjct: 488 MNDCGQLGLDHTQHQSTPQLVKG-FEGTEISMVACGLYHTIICTATGGLFACGKNDYGQL 546
Query: 216 GHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
G G + + + V SL A G +H+ V +SG+ F++G D
Sbjct: 547 GLGHNRQIKVASLV-SLPNEMVSYVASGYYHSVVVT------------NSGRTFSFGRND 593
Query: 276 KGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNP- 334
G+LG G+K + VP VA R CG TV L+ G V+ G GQLGN
Sbjct: 594 YGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRG 653
Query: 335 QADGKLPNRVEGKLSKSFVE--EIACGSYHVAVLTSK 369
AD LP ++ + K+ ++A G Y +++ +
Sbjct: 654 SADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVER 690
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 163/355 (45%), Gaps = 27/355 (7%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC 135
D++ +A G A++ G V + G G+ G G D V+ + + AL + ++ +A
Sbjct: 355 DIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 414
Query: 136 --GEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCG 191
G H A+T SG Y+WG YN G LGH N + VPK + L+ + S
Sbjct: 415 SNGCEHMIALTDSGLAYSWG---YNDRGQLGHENLTTKVHVPKLIES-LKDKKLRYASVS 470
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
H+AV+T +G+L+ FG G LG + S P+ V+ +G ACG++HT
Sbjct: 471 YHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICT 530
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
++G LF G D G+LG G V + V+ L VA G+ +
Sbjct: 531 ------------ATGGLFACGKNDYGQLGLGHNRQIKVASLVS-LPNEMVSYVASGYYHS 577
Query: 312 VALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
V +T SG ++ G YGQLG + +PN V + V CG YH +L+ +
Sbjct: 578 VVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRA-TCGCYHTVLLSEQG 636
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK---SIACGTNFTAAICLHK 422
+V+ +G+ G+LG+ + D P ++ +K + +A G T+ I K
Sbjct: 637 QVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERK 691
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 24/330 (7%)
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
GE++S G+ S G LG G D + I +I VA G +T G + T G
Sbjct: 321 GELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCG- 379
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDGTF 212
G G G+ + R L V I+ G H +T +G +++G
Sbjct: 380 -LNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDR 438
Query: 213 GVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LGH + + V +P+ +ESLK + +R A +H +AV+ SG+L+ +
Sbjct: 439 GQLGHENLTTKVHVPKLIESLKD-KKLRYASVSYHHSAVI-----------TDSGELYAF 486
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G D G+LG + + P V VACG T+ T +G ++ G YGQL
Sbjct: 487 GMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQL 546
Query: 332 G---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G N Q K+ + V L V +A G YH V+T+ +++G+ G+LG G+
Sbjct: 547 GLGHNRQI--KVASLV--SLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNK 602
Query: 389 DDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+N P++V + ++ CG T +
Sbjct: 603 VHQNVPNVVALSANTRMVRATCGCYHTVLL 632
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
++G+L++ G ++G LG GD ++E + T + CG W + +V GN +
Sbjct: 319 ASGELYSCGQNSYGELGTGD--------DIE--RHQLTSISLCG-WDD--IRQVASGNET 365
Query: 260 SSNCSS-GKLFTWGDGDKGRLGHG---DKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
+ ++ G + T G G+ G G ++ L P F + G +ALT
Sbjct: 366 LAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALT 425
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKL--PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
SG Y+ G GQLG+ K+ P +E L + + +H AV+T E+Y
Sbjct: 426 DSGLAYSWGYNDRGQLGHENLTTKVHVPKLIES-LKDKKLRYASVSYHHSAVITDSGELY 484
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+G G+LG T +++P LV+ + ++ +ACG T IC
Sbjct: 485 AFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHT-IIC 529
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 68 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 123
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 124 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 182
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 183 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 241
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 242 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 289
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 290 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 338
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L N + +AC Y H T G+++T
Sbjct: 69 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSL---NGKKIACLSYGSGPHIVLATTEGEVFT 125
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 126 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 183
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG AVV+ +G+++
Sbjct: 184 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYV 231
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G+ + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 232 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 291
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 292 LGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 339
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 74 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 132
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 133 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 180
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 181 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 240
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 241 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 299
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 300 QSYPTPVTVEKDRIIEIAACHSTHTSA 326
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 69 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 118
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 119 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 177
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 178 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 237
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 238 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 275
>gi|449662010|ref|XP_002161644.2| PREDICTED: uncharacterized protein LOC100207375 [Hydra
magnipapillata]
Length = 677
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 35/324 (10%)
Query: 113 DSDVLHPKLIDALSN-MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHW 171
D + L+ L N + I V+ G H ++ ++TWGD + FG LG G+
Sbjct: 21 DVSTMQLFLVKGLPNKIQITEVSVGLGHLAVISTERGIFTWGDNS--FGQLGVGDNEPRN 78
Query: 172 VPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
P + L G V S++CG + TA +T G + T G G FG LGHGD S++ P+ V+
Sbjct: 79 QPTEIES-LRGKCVISVACGNYFTAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDE 137
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 291
L L G H A S GK++TWG G GR GHG ++ +P
Sbjct: 138 LMTLDITSLVAGSNHVAITT------------SDGKVYTWGCGLDGRTGHGTEDNICIPK 185
Query: 292 CVAALVEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK 350
V+ E F + V C + TV ++ +G+++ GS +LG G L + K SK
Sbjct: 186 LVSFGNEKVFIQNVQCSSNGTVFISDAGNLFACGSNQGNKLGLNPRQGFL-YQFRSKSSK 244
Query: 351 SFVEE-----------------IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+ VE+ + G+ H +++ +VYT G+ G+LG G+ R
Sbjct: 245 NIVEKAKVPTLVKYSCKYQISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPREL 304
Query: 394 PSLVEALKDKQVKSIACGTNFTAA 417
S V+ L++ V +IACG++F+ A
Sbjct: 305 LSNVKGLEEVSVTTIACGSSFSMA 328
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 151/333 (45%), Gaps = 43/333 (12%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
+ + ++ G H A+++ + +F+WG+ S G+LG G + P I++L + VAC
Sbjct: 37 IQITEVSVGLGHLAVISTERGIFTWGDNSFGQLGVGDNEPRNQPTEIESLRGKCVISVAC 96
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G Y T +T +G + T G G FG LGHG+ +S PK V+ L + ++S+ G H
Sbjct: 97 GNYFTAFLTDNGLVLTCGQG--EFGCLGHGDWLSINTPKLVD-ELMTLDITSLVAGSNHV 153
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVM 254
A+ TS G+++T+G G G GHG ++ IP+ V + + C T + +
Sbjct: 154 AITTSDGKVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISD-- 211
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL----------------VPTCVAALVE 298
+G LF G +LG ++ L VPT V +
Sbjct: 212 ----------AGNLFACGSNQGNKLGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSCK 261
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL--GNPQADGKLPNRVEGKLSKSFVEEI 356
+ G S ++ G VYT G YGQL GN + L N V+G L + V I
Sbjct: 262 YQISTMQFGTSHCTMMSVDGKVYTNGENEYGQLGCGNLKPRELLSN-VKG-LEEVSVTTI 319
Query: 357 ACG-SYHVAVLTSKTE------VYTWGKGANGR 382
ACG S+ +A + ++ + +Y WG R
Sbjct: 320 ACGSSFSMAGIHTQLKEHPLNLIYFWGTKPQKR 352
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 129/287 (44%), Gaps = 24/287 (8%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+F WG+ + G LG G N + P +ES V ++ACG A +
Sbjct: 58 IFTWGDNSF-GQLGVGDNE---------PRNQPTEIESLRGKCVISVACGNYFTAFLTDN 107
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G V + G+ G LGHG + PKL+D L ++I + G H T G +YTWG
Sbjct: 108 GLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVAGSNHVAITTSDGKVYTWGC 167
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
G G GHG E + +PK V+ E + + ++ C T ++ AG LF G
Sbjct: 168 GLD--GRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISDAGNLFACGSNQGNK 225
Query: 215 LGHGDR-------KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SG 266
LG R +S S VE K V+ +C + + G S + S G
Sbjct: 226 LGLNPRQGFLYQFRSKSSKNIVEKAKVPTLVKYSC----KYQISTMQFGTSHCTMMSVDG 281
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
K++T G+ + G+LG G+ + + + + V L E + +ACG S ++A
Sbjct: 282 KVYTNGENEYGQLGCGNLKPRELLSNVKGLEEVSVTTIACGSSFSMA 328
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH 362
V GH L V T G ++T G +GQLG + + P +E K + +ACG+Y
Sbjct: 44 VGLGH-LAVISTERG-IFTWGDNSFGQLGVGDNEPRNQPTEIESLRGKCVIS-VACGNYF 100
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC--- 419
A LT V T G+G G LGHGD N+P LV+ L + S+ G+N A
Sbjct: 101 TAFLTDNGLVLTCGQGEFGCLGHGDWLSINTPKLVDELMTLDITSLVAGSNHVAITTSDG 160
Query: 420 -LHKWVSGVD--------QSMCSGCRLPFNNFKRKRHN--CYNCGLVFC------HSCSS 462
++ W G+D ++C + F N K N C + G VF +C S
Sbjct: 161 KVYTWGCGLDGRTGHGTEDNICIPKLVSFGNEKVFIQNVQCSSNGTVFISDAGNLFACGS 220
Query: 463 KKSLKASMAP 472
+ K + P
Sbjct: 221 NQGNKLGLNP 230
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 125
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 126 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 184
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 185 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 291
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 292 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ I AC Y H T G+++T
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLATTEGEVFT 127
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 128 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 185
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG AVV+ +G+++
Sbjct: 186 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYV 233
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G+ + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 294 LGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 134
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 135 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 182
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 242
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 243 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 302 QSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 120
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 121 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 239
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 125
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 126 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 184
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 185 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 291
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 292 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+L+ I AC Y H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPH 115
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 116 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 173
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 227
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 228 ------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 282 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 340
Query: 377 K 377
+
Sbjct: 341 Q 341
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 134
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 135 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 182
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 242
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 243 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 302 QSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 13/222 (5%)
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T ++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 67 TVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT--- 120
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTS 317
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+
Sbjct: 121 -----TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSD 175
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G GQ+G+ + +P RV G L V IACG + EVY WG
Sbjct: 176 GEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWG 235
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
NG+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 236 YNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 125
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 126 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 184
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 185 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 291
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 292 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+L+ I AC Y H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPH 115
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 116 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 173
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 227
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 228 ------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 282 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 340
Query: 377 K 377
+
Sbjct: 341 Q 341
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 134
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 135 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 182
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 242
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 243 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 302 QSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 120
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 121 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 239
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 164/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L I + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIMT-LNDIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG +D + P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+++ I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V ++ ++ CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C + + + G AN H DT +P
Sbjct: 325 PEA-LTENF--DISCLISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + + + + GD + G LG +P+ + LE + V +SCG
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K +S P+++ +L ++ ++ +CG +H+ A+
Sbjct: 86 HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL-- 143
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 144 ----------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ G + GS GQL N P V G L V I+CG H AVLT
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLT 252
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G +G+LG+ T ++ P LVE + D V I CG+ T A
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLIVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 295 GSYHTLAYV 303
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L +
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG + + G N V + S+ P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-------VPVQSNKPLSVGALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ G+LG+ + P+L++ + + + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHG 315
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 180 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 287 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+L+ I AC Y H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPH 110
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 111 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 222
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 223 ------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 335
Query: 377 K 377
+
Sbjct: 336 Q 336
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 149/357 (41%), Gaps = 23/357 (6%)
Query: 70 LESAVVLDVQNIACG-----GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
L A+VL V ++ G +A G +WG S GRLG G +D P ++
Sbjct: 30 LLVAIVLGVTSVGAARVLAQGVPSAAAGPPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNV 89
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGI 183
+ I VA G H+ AVT +G WGD FG LG G + S P V+ P G
Sbjct: 90 PAGTTITAVAGGAGHSLAVTSAGTALAWGD--NAFGQLGDGTTIPSSSTPVAVDVP-AGT 146
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
V+++S G H VTSAG +GD +G LG G P V G A G
Sbjct: 147 TVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAG 206
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
H+ AV S+G WGD G+LG G +P
Sbjct: 207 QGHSLAV------------TSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITA 254
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
VA G ++ALT+ G V G+ GQLG+ P V+ + + V +A G H
Sbjct: 255 VAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVD-VPAGTTVTAVAAGGRH 313
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+TS +V WG G+LG G T ++P V + ++A G+ + A+
Sbjct: 314 SLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVT 370
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 148/363 (40%), Gaps = 18/363 (4%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVL 117
G DSS P ++ + +A G H+ V G +WG+ + G+LG G
Sbjct: 76 GTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSS 135
Query: 118 HPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRV 176
P +D + + ++ G H AVT +G WGD NF G LG G+ P V
Sbjct: 136 TPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGD---NFWGQLGDGSTTRSRTPVAV 192
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLR 236
N P G +++++ G H+ VTSAG +GD + G LG G SIP + G
Sbjct: 193 NVP-AGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTT 251
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
A G H+ A+ S G + WG G+LG G + P V
Sbjct: 252 ITAVAAGGLHSLAL------------TSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVP 299
Query: 297 VEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEI 356
VA G ++A+T++G V G GQLG+ + + + +
Sbjct: 300 AGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAV 359
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A GS H +TS WG G+LG G T P V+ V +IA G+ +
Sbjct: 360 ATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSL 419
Query: 417 AIC 419
AI
Sbjct: 420 AIV 422
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 128/311 (41%), Gaps = 15/311 (4%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
SS P A++ V ++ GG H V G +WG+ G+LG G + P ++
Sbjct: 134 SSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRTPVAVN 193
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
+ I VA G+ H+ AVT +G WGD + G LG G +P + P G
Sbjct: 194 VPAGTTITAVAAGQGHSLAVTSAGTALAWGD--NSSGQLGDGTATDSSIPVAADVP-AGT 250
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
+++++ G H+ +TS G + +G G LG G S S P V+ G A G
Sbjct: 251 TITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAG 310
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
H+ AV S+G + WGD G+LG G P V
Sbjct: 311 GRHSLAV------------TSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITA 358
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
VA G ++A+T++ G +GQLG+ + + + V IA GS+H
Sbjct: 359 VATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHS 418
Query: 364 AVLTSKTEVYT 374
+ T T
Sbjct: 419 LAIVPSTSTTT 429
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 14/245 (5%)
Query: 8 AFRVSLSSAVSSSSQGSGHDDG-DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSL 66
A V + +++ + G GH + G WG+ + G LG G DSS+
Sbjct: 191 AVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNS-SGQLG---------DGTATDSSI 240
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
P A + + +A GG H+ + G+V +WG G+LG G + P +D +
Sbjct: 241 PVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPA 300
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ VA G H+ AVT +GD+ WGD T G LG G+ P VN P G ++
Sbjct: 301 GTTVTAVAAGGRHSLAVTSAGDVLAWGDNTA--GQLGDGSTTHSSTPVAVNVP-AGTTIT 357
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
+++ G H+ VTS +GD TFG LG G S IP V+ G A G +H
Sbjct: 358 AVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFH 417
Query: 247 TAAVV 251
+ A+V
Sbjct: 418 SLAIV 422
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 109/261 (41%), Gaps = 17/261 (6%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G S P A+ + +A G H+ V G +WG+ S G+LG G +D
Sbjct: 181 GSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGTATDSSI 240
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
P D + I VA G H+ A+T GD+ W G G LG G S P V+
Sbjct: 241 PVAADVPAGTTITAVAAGGLHSLALTSGGDVLAW--GANGSGQLGDGTTTSSSTPVAVDV 298
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV 238
P G V++++ G H+ VTSAG + +GD T G LG G S P V G
Sbjct: 299 P-AGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTIT 357
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE 298
A G H+ AV S+ WGD G+LG G + ++P V
Sbjct: 358 AVATGSGHSLAV------------TSTDTALAWGDNTFGQLGDGSTTSSIIPVAVDLPAG 405
Query: 299 PNFCRVACG--HSLTVALTTS 317
+A G HSL + +TS
Sbjct: 406 TTVTAIAGGSFHSLAIVPSTS 426
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 180 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 287 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+L+ I AC Y H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPH 110
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 111 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 222
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 223 ------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 335
Query: 377 K 377
+
Sbjct: 336 Q 336
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 178/388 (45%), Gaps = 50/388 (12%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLG---HGVDSDVLHPKLIDALSNMNIELVACGE 137
IA G HA + G V+SWG S G+LG G S P+ I+A+S N+ +ACG
Sbjct: 1038 IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAIS--NVAAIACGG 1095
Query: 138 YHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ AV G L++WG YN +G LG G+ S P++VN +V++I+ G +++
Sbjct: 1096 SHSLAVARDGSLWSWG---YNYYGQLGLGDNYSKTTPQKVNAI---SNVAAIAAGEYYSL 1149
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
+T G ++++GD + G LG GD + + P++VE L + + A G H+ A+
Sbjct: 1150 ALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAI--AAGEDHSLALTR---- 1203
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
G +++WG +G+LG D + + P V + N +A G+S + A++
Sbjct: 1204 --------DGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTI--SNIKAIAAGNSHSFAISE 1253
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK--SFVEEIACGSYHVAVLTSKTEVYT 374
G + G GQLG + G L N + K S V ++ G+YH LT ++
Sbjct: 1254 EGLAWAWGYNYDGQLGIGTS-GSLANENTPQKVKVISNVVGLSGGNYHSLALTEDGALWA 1312
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSG 434
WG +G++G D +N V+ + +V + + G D M
Sbjct: 1313 WGDNDDGQIGSTGGDRKNP---VQVFQSSEVFHLYLDVD----------ADGADDEMYDN 1359
Query: 435 CRLPFNNFKRKRHN------CYNCGLVF 456
C +N + C NC ++
Sbjct: 1360 CLSLYNPGQEDADGDGAGDLCDNCPAIY 1387
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 140/275 (50%), Gaps = 26/275 (9%)
Query: 74 VVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELV 133
+ +V IACGG H+ + + G +SWG G+LG G + P+ ++ALS N+ +
Sbjct: 595 AISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAM 652
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A G+ H+ A+TL G L++WGD TY G LG G+ P++VN +V +I+ G
Sbjct: 653 AAGDRHSLALTLDGSLWSWGDNTY--GQLGLGDNDHRNTPRKVNAI---SNVVAIAAGYR 707
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+ +T G ++++G+ T G LG GD + P+ V ++ ++ + A G ++ A+ E
Sbjct: 708 HSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAI--AVGNNYSIAISE- 764
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLG---HGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
G ++ WG G+LG HG + P V +V N ++ G S
Sbjct: 765 -----------EGLVWAWGYNCSGQLGIGTHGSLADENTPQKV--IVISNVVGLSAGSSH 811
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVE 345
++ALT G ++ G+ GQ+ +A + N V+
Sbjct: 812 SIALTEDGALWAWGNNEAGQIAAEEAIEYIDNPVQ 846
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 24/289 (8%)
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+VA G + A+ G L++WGD LG G V+ + P +V+ + I+ G
Sbjct: 985 MVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP---AAKIAAG 1041
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAV 250
H + G ++++G + G LG G + S + + + V A ACG H+ AV
Sbjct: 1042 DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAV 1101
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
G L++WG G+LG GD +K P V A+ N +A G
Sbjct: 1102 AR------------DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAI--SNVAAIAAGEYY 1147
Query: 311 TVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
++ALT G V++ G GQLG D P +VE S V IA G H LT
Sbjct: 1148 SLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVE---VLSNVAAIAAGEDHSLALTRD 1204
Query: 370 TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V++WG+ + G+LG D DDRN+P V + + +K+IA G + + AI
Sbjct: 1205 GSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN--IKAIAAGNSHSFAI 1251
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 160/331 (48%), Gaps = 35/331 (10%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS--DVLHPKLIDALSNMNIELVACGEY 138
+A GG + + G ++SWG+ G+LG G+ +V P +DAL +A G+
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPA--AKIAAGDN 1043
Query: 139 HTCAVTLSGDLYTWGDGTYN----FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
H A+ G +++WG YN GL G + P+++N +V++I+CG H
Sbjct: 1044 HALALAPDGSVWSWG---YNSDGQLGLGSSGTYSTKNRPQKINAI---SNVAAIACGGSH 1097
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ V G L+++G +G LG GD S + P++V ++ + + A G +++ A+
Sbjct: 1098 SLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISNVAAI--AAGEYYSLALTR-- 1153
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G +++WGD G+LG GD E + P V L N +A G ++AL
Sbjct: 1154 ----------DGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVL--SNVAAIAAGEDHSLAL 1201
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
T G V++ G GQLG D + N + + S ++ IA G+ H ++ + +
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDR--NTPQPVTTISNIKAIAAGNSHSFAISEEGLAWA 1259
Query: 375 WGKGANGRLGHGDTD---DRNSPSLVEALKD 402
WG +G+LG G + + N+P V+ + +
Sbjct: 1260 WGYNYDGQLGIGTSGSLANENTPQKVKVISN 1290
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 154/336 (45%), Gaps = 33/336 (9%)
Query: 87 HAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLS 146
H+ + G V+ WG +LG G D + L P+ +SN I VA G + A+
Sbjct: 78 HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSN--IVSVAAGRLFSLALASD 135
Query: 147 GDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
G L+ WG G Y +G LG G+ + P + G + V++I+ G +H T +G+++
Sbjct: 136 GSLWAWG-GNY-YGQLGMGDNDNRLTPSKTPGLSD---VAAIAGGDYHALAATQSGEVWA 190
Query: 207 FGDGTFGVLGH-GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G G LG GD P +V L +++V A G + + A+ +
Sbjct: 191 MGRNDHGQLGFTGDHADA--PVQVAGLSNVKSV--AAGEFFSLALK------------ND 234
Query: 266 GKLFTWGDGDKGRLGHG-DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G ++ WG+ + +LG G EA P +A L N +A G +AL G V+ G
Sbjct: 235 GTVWAWGNNESAQLGTGIAGEAVATPAPIAVL--SNITAIAAGRRHAMALAEDGSVWAWG 292
Query: 325 SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+ GQLG + K P RV S + V IA G +H LTS ++ WG +GRL
Sbjct: 293 ANGSGQLGFGDFETPKAPGRVS---SLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRL 349
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G T D++ P+ V ++ + S A G + AI
Sbjct: 350 GTDATSDQSLPAQVSSISN--AVSFAGGQRHSLAIA 383
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 31/344 (9%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGV--DSDVLHPKLIDALSNMNIELVACGEY 138
+A GG + + G V+SWG G+LG G+ + DV P +DAL +A G
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLA--ASIAAGGG 554
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS-HWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H A+ G +++WG + LG G S P+++N +V++I+CG H+
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAI---SNVAAIACGGSHSLA 611
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ G +++G +G LG GD S + PR+V +L V A G H+ A+
Sbjct: 612 LARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNALS--NVVAMAAGDRHSLALT------ 663
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G L++WGD G+LG GD + + P V A+ N +A G+ ++ALT
Sbjct: 664 ------LDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAI--SNVVAIAAGYRHSLALTRD 715
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
G V++ G+ GQLG D + N + + S ++ IA G+ + ++ + V+ WG
Sbjct: 716 GSVWSWGNNTRGQLGLGDNDDR--NTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAWGY 773
Query: 378 GANGRLG---HGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G+LG HG D N+P V + + V ++ G++ + A+
Sbjct: 774 NCSGQLGIGTHGSLADENTPQKVIVISN--VVGLSAGSSHSIAL 815
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 137/290 (47%), Gaps = 26/290 (8%)
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG-PLEGIHVSSISC 190
+VA G + A+ G +++WG+ LG G + P V+ PL +SI+
Sbjct: 496 MVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPL----AASIAA 551
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAA 249
G H + S G ++++G + G LG G + S + + + V A ACG H+ A
Sbjct: 552 GGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNVAAIACGGSHSLA 611
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ G ++WG G+LG GD +K P V AL N +A G
Sbjct: 612 LAR------------DGSFWSWGYNYYGQLGLGDNVSKTTPRKVNAL--SNVVAMAAGDR 657
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
++ALT G +++ G YGQLG D + P +V + S V IA G H LT
Sbjct: 658 HSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVN---AISNVVAIAAGYRHSLALTR 714
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
V++WG G+LG GD DDRN+P V + + +K+IA G N++ AI
Sbjct: 715 DGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISN--IKAIAVGNNYSIAI 762
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 37/316 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG + DG LG +GS G + P+ + + + +V IACGG H+ V
Sbjct: 1052 GSVWSWGYNS-DGQLG-----LGSS-GTYSTKNRPQKINA--ISNVAAIACGGSHSLAVA 1102
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
+ G ++SWG G+LG G + P+ ++A+S N+ +A GEY++ A+T G +++W
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAIS--NVAAIAAGEYYSLALTRDGSVWSW 1160
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGI-HVSSISCGPWHTAVVTSAGQLFTFGDGT 211
GD + G LG G+ P++V E + +V++I+ G H+ +T G ++++G +
Sbjct: 1161 GDNSD--GQLGLGDNEDRNTPQKV----EVLSNVAAIAAGEDHSLALTRDGSVWSWGRNS 1214
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
G LG D + P+ V ++ ++ + A G H+ A+ E G + W
Sbjct: 1215 RGQLGLDDNDDRNTPQPVTTISNIKAI--AAGNSHSFAISE------------EGLAWAW 1260
Query: 272 GDGDKGRLGHGDKEA---KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
G G+LG G + + P V + N ++ G+ ++ALT G ++ G
Sbjct: 1261 GYNYDGQLGIGTSGSLANENTPQKVKVI--SNVVGLSGGNYHSLALTEDGALWAWGDNDD 1318
Query: 329 GQLGNPQADGKLPNRV 344
GQ+G+ D K P +V
Sbjct: 1319 GQIGSTGGDRKNPVQV 1334
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 41/354 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V++WG N++G G ++ P+ ++ VV ++ ++A G + +
Sbjct: 86 GTVWVWGRND--------YNQLG--LGDDINRLAPE--QAPVVSNIVSVAAGRLFSLALA 133
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G +++WG G+LG G + + L P LS ++ +A G+YH A T SG++ W
Sbjct: 134 SDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQSGEV--W 189
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
G + G LG + + P +V G +V S++ G + + + + G ++ +G+
Sbjct: 190 AMGRNDHGQLGFTGDHAD-APVQVAGL---SNVKSVAAGEFFSLALKNDGTVWAWGNNES 245
Query: 213 GVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG G ++V+ P + L + + A G H A+ E G ++ W
Sbjct: 246 AQLGTGIAGEAVATPAPIAVLSNITAI--AAGRRHAMALAE------------DGSVWAW 291
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G G+LG GD E P V++L + +A G ++ALT+ G ++ G+ G+L
Sbjct: 292 GANGSGQLGFGDFETPKAPGRVSSLAD--VTAIASGWFHSLALTSDGVLWAWGNNGDGRL 349
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G + +D LP +V S S A G H + + V++WG A G+LG
Sbjct: 350 GTDATSDQSLPAQVS---SISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG 400
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 152/371 (40%), Gaps = 45/371 (12%)
Query: 73 AVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNM-NIE 131
AV+ ++ IA G RHA + + G V++WG G+LG G D PK +S++ ++
Sbjct: 264 AVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFG---DFETPKAPGRVSSLADVT 320
Query: 132 LVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 191
+A G +H+ A+T G L+ WG+ G LG +P +V+ + S + G
Sbjct: 321 AIASGWFHSLALTSDGVLWAWGNN--GDGRLGTDATSDQSLPAQVSSISNAV---SFAGG 375
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR--------AACG 243
H+ + + G ++++G +G LG S+ V +L A
Sbjct: 376 QRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYSGEDFHLFYDTDGDGAAN 435
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL--VEPNF 301
+W + + S + C S G D+ GD C ++P F
Sbjct: 436 IWDDDDDGDGFLDESDNCPCVSNP----GQEDE----DGDGTGDFCDGCPGDFFKIQPGF 487
Query: 302 C-------RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKS 351
VA G ++AL T G V++ G+ GQLG + P V+ +
Sbjct: 488 SGCGNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVD---ALP 544
Query: 352 FVEEIACGSYHVAVLTSKTEVYTWGKGA---NGRLGHGDTDDRNSPSLVEALKDKQVKSI 408
IA G H L S V++WG+ + G G N P + A+ + V +I
Sbjct: 545 LAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN--VAAI 602
Query: 409 ACGTNFTAAIC 419
ACG + + A+
Sbjct: 603 ACGGSHSLALA 613
>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 136/285 (47%), Gaps = 16/285 (5%)
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN 158
SWG LGHG ++ +PK I +L + VA G H A+ SG +Y+WG G
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLN- 59
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LGHGN PK + + I+CG H+A +T G+L+++G G G LG+G
Sbjct: 60 -GRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
+R P V L+ L ACG N++ + G LF+WG G G
Sbjct: 119 ERHDQWTPNLVLRLRDLVVSYVACGT------------NTTFACTGGGLLFSWGSGKHGC 166
Query: 279 LGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG 338
LG GD+E +L P+ V E RVACG +ALT G ++ G G G
Sbjct: 167 LGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSE 226
Query: 339 KL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
L P+++ ++ V ++CG +H A LT + +++ +G G R
Sbjct: 227 VLSPHKLPMPEDRTIV-SMSCGRWHSAYLTIRGDIFCFGSGRGFR 270
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 138/271 (50%), Gaps = 16/271 (5%)
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+WG G +N LGHG+ + PK + L+ V ++ GP H + + S+GQ++++G G
Sbjct: 1 SWGTG-FNL-CLGHGSHANEKYPKPIK-SLKEKGVIQVAVGPQHCSALCSSGQIYSWGIG 57
Query: 211 TFGVLGHGDRKSVSIPREVESLK-GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGHG+ + S P+ + S K V+ ACG H+A + + GKL+
Sbjct: 58 LNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQ------------DGKLY 105
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
+WG G G LG+G++ + P V L + VACG + T A T G +++ GS +G
Sbjct: 106 SWGRGLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHG 165
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + +L + + + +ACG +H LT +++ WG+G G G G T
Sbjct: 166 CLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTS 225
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+ SP + +D+ + S++CG +A + +
Sbjct: 226 EVLSPHKLPMPEDRTIVSMSCGRWHSAYLTI 256
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 121/268 (45%), Gaps = 16/268 (5%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G + PK ++S V +A G +H + + G+++SWG GRLGHG D
Sbjct: 13 GSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSA 72
Query: 119 PKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 177
PK++ + N +ACG H+ +T G LY+WG G G LG+G W P V
Sbjct: 73 PKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLN--GELGNGERHDQWTPNLVL 130
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L + VS ++CG T T G LF++G G G LG GDR+ P V + R
Sbjct: 131 -RLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRI 189
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+R ACG H A+ E GKL+ WG G G G G L P +
Sbjct: 190 IRVACGEHHCLALTE------------DGKLWGWGRGTGGCHGLGHTSEVLSPHKLPMPE 237
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGS 325
+ ++CG + LT G ++ GS
Sbjct: 238 DRTIVSMSCGRWHSAYLTIRGDIFCFGS 265
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 103/220 (46%), Gaps = 14/220 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
G ++ WG G +G LG G DSS PK L S IACG H+A +
Sbjct: 49 GQIYSWGIGL-NGRLG---------HGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYL 98
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G+++SWG G LG+G D P L+ L ++ + VACG T A T G L++
Sbjct: 99 TQDGKLYSWGRGLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFS 158
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG G + G LG G+ P V E + ++CG H +T G+L+ +G GT
Sbjct: 159 WGSGKH--GCLGLGDREDRLEPSLVR-LREEDRIIRVACGEHHCLALTEDGKLWGWGRGT 215
Query: 212 FGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
G G G V P ++ + V +CG WH+A +
Sbjct: 216 GGCHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYLT 255
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G ++ WG G +G LG G + D P + L V +ACG
Sbjct: 102 GKLYSWGRGL-NGELGNG---------ERHDQWTPNLVLRLRDLVVSYVACGTNTTFACT 151
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G +FSWG G LG G D L P L+ I VACGE+H A+T G L+ W
Sbjct: 152 GGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGW 211
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G GT LGH +EV P ++ P E + S+SCG WH+A +T G +F FG G
Sbjct: 212 GRGTGGCHGLGHTSEVL--SPHKLPMP-EDRTIVSMSCGRWHSAYLTIRGDIFCFGSG 266
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 182/416 (43%), Gaps = 58/416 (13%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG G DG LG G N + P +E+ V + G R++ +
Sbjct: 10 VLAWGSGE-DGQLGMGGNE---------EKDWPHFVEALGPYAVTAVVAGSRNSLAICDD 59
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F+WG G LGH ++ P +DAL+ I A G +H AV G Y WG
Sbjct: 60 GRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWG 119
Query: 154 DGTYNFGLLGHGNEVSH----------WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
Y G G E +P+R L+ V ++ G H+ V+T G
Sbjct: 120 GNEY--GQCGEEPERKEDGTRALRRDIPIPQRCALKLK---VRQVAAGGTHSVVLTQEGH 174
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G GD K +S P V+ L+ +R + A G +H A+ E ++
Sbjct: 175 VWTWGQ----PWPPGDIKQISTPVRVQGLEKVRVI--AVGAFHNLALTEDVI-------- 220
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
L+ WG+ + G+LG GD + + P V L + + +A G + ALT G VY
Sbjct: 221 ----LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAW 276
Query: 324 GSPVYGQL--GNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G +G+L G+ ++ +P +VE L+ + +++CG H L ++++G+G +G
Sbjct: 277 GRGEHGRLGFGDDKSSHMVPLKVE-LLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHG 335
Query: 382 RLGHGDTDDR--------NSPSLVEALKDK-QVKSIACGTNFTAAICLHKWVSGVD 428
RLG+G N P L + + Q K +ACG T AI +W D
Sbjct: 336 RLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIA--EWTEATD 389
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+A T V WG G +G+LG G ++++ P VEAL V ++ G+ + AIC
Sbjct: 1 MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAIC 57
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 164/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L I + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIMT-LNDIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG +D + P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 36/351 (10%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+++ I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
K P V ++ ++ CG T+A +V+T G V G+ +D P
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTH 324
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
E L+++F +I+C + + + G AN H DT +P
Sbjct: 325 PEA-LTENF--DISCLISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAP 372
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + + + + GD + G LG +P+ + LE + V +SCG
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K +S P+++ +L ++ ++ +CG +H+ A+
Sbjct: 86 HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL-- 143
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 144 ----------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ G + GS GQL N P V G L V I+CG H AVLT
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLT 252
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G +G+LG+ T ++ P LVE + D V I CG+ T A
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLIVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 295 GSYHTLAYV 303
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L +
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG + + G N V + S+ P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-------VPVQSNKPLSVGALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ G+LG+ + P+L++ + + + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHG 315
>gi|340368103|ref|XP_003382592.1| PREDICTED: hypothetical protein LOC100632986 [Amphimedon
queenslandica]
Length = 2287
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 144/317 (45%), Gaps = 36/317 (11%)
Query: 92 NKQGEVFSWGEESGGRLGHGV---------------DSDVLHPKLIDALSNMNIELVACG 136
N+ +F WGE G LG V D + + ID + I ++CG
Sbjct: 1276 NRLSVMFCWGEAHDGALGLDVKEKCVMEARPNTAFGDKKIKYIAHIDTFDDTIITSISCG 1335
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
H+ A++ G LY WGD + G LG P ++ P G V +CG HT
Sbjct: 1336 VKHSLALSSDGSLYAWGDNSE--GQLGLKTLQPICKPSILSLPF-GRPVVQAACGDHHTL 1392
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKS-VSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
+T G++F++G T LGH S V P ++ L V+ CG H+AA+
Sbjct: 1393 ALTQDGRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGSNHSAALT---- 1448
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTVAL 314
SG +F WGD + + G G K+ PT + VACG TV
Sbjct: 1449 --------VSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYAVSHVACGTDHTVFQ 1500
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG--KLSKSFVEEIACGSYHVAVLTSKT-E 371
SGH+YT+GS YGQLG A G + +R +L V+++ CG YH +L T +
Sbjct: 1501 VQSGHIYTVGSNEYGQLGR-GARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTGD 1559
Query: 372 VYTWGKGANGRLGHGDT 388
+ T+G+G G+LG+G T
Sbjct: 1560 LITFGQGLMGQLGNGTT 1576
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 154/348 (44%), Gaps = 46/348 (13%)
Query: 11 VSLSSAVSSSSQGSGHD----------DGDALGDVFIWGEGTGDGVLGGGLN-------R 53
+S + SS S SG D + + L +F WGE DG LG + R
Sbjct: 1247 LSFMNMASSGSTRSGLDSVQRILKFYYERNRLSVMFCWGEA-HDGALGLDVKEKCVMEAR 1305
Query: 54 VGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD 113
+ FG K + +++ + +I+CG +H+ ++ G +++WG+ S G+LG
Sbjct: 1306 PNTAFGDKKIKYI-AHIDTFDDTIITSISCGVKHSLALSSDGSLYAWGDNSEGQLGLKTL 1364
Query: 114 SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
+ P ++ + ACG++HT A+T G +++WG T + LGH +S
Sbjct: 1365 QPICKPSILSLPFGRPVVQAACGDHHTLALTQDGRVFSWGKNTTS--QLGHSKGLS---- 1418
Query: 174 KRVNGPLEGIHVSS-----ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS-VSIPR 227
RV P + H+ S + CG H+A +T +G +F +GD G G + +S P
Sbjct: 1419 -RVLAPTQITHLISTPVVKLICGSNHSAALTVSGGVFLWGDNRRAQCGFGHVTTKISYPT 1477
Query: 228 EVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 287
E + ACG HT V+ SG ++T G + G+LG G + A
Sbjct: 1478 LNEFMGRYAVSHVACGTDHTVFQVQ------------SGHIYTVGSNEYGQLGRGARGAV 1525
Query: 288 LV-PTCVAALVEPNFCRVACGHSLTVALTT-SGHVYTMGSPVYGQLGN 333
P + L+ +V CG T L +G + T G + GQLGN
Sbjct: 1526 YSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTGDLITFGQGLMGQLGN 1573
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 149/356 (41%), Gaps = 28/356 (7%)
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSW-GEESGGRLGHGVDSDVLHPKLIDALSNMN 129
+S L+V+N GG ++L+ E S+ S G G+DS K + ++
Sbjct: 1220 DSEFALNVKNKLPGGNFSSLIKVLKEFLSFMNMASSGSTRSGLDSVQRILKFYYERNRLS 1279
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
+ + GE H A+ L + N G++ ++ + ++SIS
Sbjct: 1280 V-MFCWGEAHDGALGLDVKEKCVMEARPNTAF---GDKKIKYIAHI--DTFDDTIITSIS 1333
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG H+ ++S G L+ +GD + G LG + + P + G V+AACG HT A
Sbjct: 1334 CGVKHSLALSSDGSLYAWGDNSEGQLGLKTLQPICKPSILSLPFGRPVVQAACGDHHTLA 1393
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK-LVPTCVAALVEPNFCRVACGH 308
+ + G++F+WG +LGH ++ L PT + L+ ++ CG
Sbjct: 1394 LTQ------------DGRVFSWGKNTTSQLGHSKGLSRVLAPTQITHLISTPVVKLICGS 1441
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP----NRVEGKLSKSFVEEIACGSYHVA 364
+ + ALT SG V+ G Q G K+ N G+ + V +ACG+ H
Sbjct: 1442 NHSAALTVSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYA---VSHVACGTDHTV 1498
Query: 365 VLTSKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAIC 419
+YT G G+LG G S P+ + L V+ + CG T +
Sbjct: 1499 FQVQSGHIYTVGSNEYGQLGRGARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLA 1554
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 33 GDVFIWGEGTGDGV-LGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALV 91
G VF WG+ T + GL+RV + P + + V + CG H+A +
Sbjct: 1398 GRVFSWGKNTTSQLGHSKGLSRVLA----------PTQITHLISTPVVKLICGSNHSAAL 1447
Query: 92 NKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G VF WG+ + G G V + + +P L + + + VACG HT SG +Y
Sbjct: 1448 TVSGGVFLWGDNRRAQCGFGHVTTKISYPTLNEFMGRYAVSHVACGTDHTVFQVQSGHIY 1507
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS-AGQLFTFGD 209
T G Y G LG G + + L + V + CG +HT ++ G L TFG
Sbjct: 1508 TVGSNEY--GQLGRGARGAVYSRPAPIMQLMTVVVQQVVCGRYHTTLLAKYTGDLITFGQ 1565
Query: 210 GTFGVLGHG 218
G G LG+G
Sbjct: 1566 GLMGQLGNG 1574
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 164/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L I + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIMT-LNDIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG +D + P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 139/282 (49%), Gaps = 27/282 (9%)
Query: 49 GGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G L R G+ G LP+ +++ L V ++CG H+ V +G VF+WG S G+L
Sbjct: 53 GQLGRRGAQRG-----ELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107
Query: 109 GHGVDSDV-LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNE 167
G G ++ PK I L+++ I V+CG YH+ A++ +++WG ++ G LG G E
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKE 165
Query: 168 V-SHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SV 223
S P+RV LEGI ++ ++ G H+ ++ G F +G + G L R
Sbjct: 166 FPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQS 224
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
+ P V +LK L V +CG HTA + + GK+FT+GD G+LG+
Sbjct: 225 NKPLSVGALKNLGVVYISCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSP 272
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALT-TSGHVYTMG 324
K P V ++ ++ CG T+A T+G V + G
Sbjct: 273 TPEKRGPQLVER-IDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 141/290 (48%), Gaps = 23/290 (7%)
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
A GE H+ + + + + GD + G LG +P+ + LE + V +SCG
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRGELPEPIQA-LETLIVDLVSCGKE 85
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREVESLKGLRTVRAACGVWHTAAVVE 252
H+ V G++F +G G+ G LG G+ K +S P+++ +L ++ ++ +CG +H+ A+
Sbjct: 86 HSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLAL-- 143
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLT 311
++F+WG G+LG G + ++ P V +L +VA G + +
Sbjct: 144 ----------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHS 193
Query: 312 VALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
AL+ G + GS GQL N P V G L V I+CG H AVLT
Sbjct: 194 FALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLT 252
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+V+T+G +G+LG+ T ++ P LVE + D V I CG+ T A
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYHTLA 301
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A++ V L S S H G VF WG G+ +G LG G K S
Sbjct: 71 ALETLIVDLVSCGKEHSLAVCHK-----GRVFAWGAGS-EGQLGIG--------EFKEIS 116
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLID 123
PK + + + + ++CG H+ ++K +VFSWG+ S G+LG G + P+ +
Sbjct: 117 FTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR 176
Query: 124 ALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEG 182
+L + + VA G H+ A++L G + WG + L G V P V G L+
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV-GALKN 235
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ V ISCG HTAV+T G++FTFGD G LG+ P+ VE + GL + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVS-QIDC 294
Query: 243 GVWHTAAVV 251
G +HT A V
Sbjct: 295 GSYHTLAYV 303
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L +
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG---LGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 17 VSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV 75
++ + G H +L G F WG + + G N V + S+ P ++ +
Sbjct: 183 LAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRN-------VPVQSNKPLSVGALKN 235
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V I+CG H A++ + G+VF++G+ G+LG+ + P+L++ + + + + C
Sbjct: 236 LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDC 294
Query: 136 GEYHTCA-VTLSGDLYTWGDG 155
G YHT A V +G + ++G G
Sbjct: 295 GSYHTLAYVHTTGQVVSFGHG 315
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 164/362 (45%), Gaps = 42/362 (11%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEY 138
++ACGG H + + G VF+ G G+LG G + L P + +E V+ G +
Sbjct: 70 SLACGGAHTLFLTQSGRVFATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVE-VSAGNH 128
Query: 139 HTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVV 198
H+CAVT G L+ WG + LG G P +V+ L + ++ G H+ V
Sbjct: 129 HSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVD-CLTDFRIKMVALGSEHSIAV 187
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACGVWHTAA 249
T G++ ++G G LGHG + S+ PR +++ G++ + A G+ H+A
Sbjct: 188 TEEGEVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSAC 247
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E G LF +G K G G P V + P VACG
Sbjct: 248 IDE------------KGTLFIFGQ--KTEKGFGRSNEAFRPNIVEEI--PFSEEVACGGY 291
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTS 368
T +T SG +Y+ GS G LG D P ++ L K V +++CG H AV+ S
Sbjct: 292 HTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVI-S 350
Query: 369 KTEVYTWGKG------------ANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
++YTWG G + G+LGHG+ D P +V K+ + ++CG N T
Sbjct: 351 GDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGKNARAVHVSCGFNHTG 410
Query: 417 AI 418
AI
Sbjct: 411 AI 412
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 150/335 (44%), Gaps = 36/335 (10%)
Query: 100 WGEESGGRLGHGVDSDVLHPKLIDALSNMNIE---LVACGEYHTCAVTLSGDLYTWGDGT 156
WG GRLG GV P + + +ACG HT +T SG ++ G
Sbjct: 35 WGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRVFA--TGL 92
Query: 157 YNFGLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVL 215
+FG LG G+ V+H + P V+G E V +S G H+ VT+ G+LF +G + G L
Sbjct: 93 NDFGQLGVGSSVTHTLEPVEVSGFHE--RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQL 150
Query: 216 G--HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
G G K VS P +V+ L R A G H+ AV E G++ +WG
Sbjct: 151 GLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTE------------EGEVLSWGA 198
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCR---------VACGHSLTVALTTSGHVYTMG 324
GRLGHG + + L + + P + +A G + + G ++ G
Sbjct: 199 AGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFG 258
Query: 325 SPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
G + PN VE F EE+ACG YH V+T ++Y+WG NG LG
Sbjct: 259 QKTEKGFGRSN-EAFRPNIVE---EIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLG 314
Query: 385 HGDTDDRNSPSLVE-ALKDKQVKSIACGTNFTAAI 418
G TD SP +++ +L V ++CG TA I
Sbjct: 315 LGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVI 349
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 129/297 (43%), Gaps = 32/297 (10%)
Query: 31 ALGDVFIWGEGTGDGV-LGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
A G +F+WG +G + LG G +V S P ++ ++ +A G H+
Sbjct: 135 ADGKLFVWGRNSGGQLGLGKGAGKV---------VSTPTKVDCLTDFRIKMVALGSEHSI 185
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDALSNMNIELVACGEYHT 140
V ++GEV SWG GRLGHG S +L P+LI + I+ +A G H+
Sbjct: 186 AVTEEGEVLSWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHS 245
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
+ G L+ +G T G G + P V E ++CG +HT VVT
Sbjct: 246 ACIDEKGTLFIFGQKTEK----GFGRSNEAFRPNIVE---EIPFSEEVACGGYHTCVVTD 298
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVV--EVMVGN 257
+G L+++G G LG G V P ++ SL L + +CG HTA + ++
Sbjct: 299 SGDLYSWGSNENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWG 358
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+N G F G G+LGHG+ P V V+CG + T A+
Sbjct: 359 WGGAN---GTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGKNARAVHVSCGFNHTGAI 412
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 120/234 (51%), Gaps = 24/234 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSS--LPKALESAVVLDVQNIACGGRHAAL 90
G+V WG G G LG G R S G + +S P+ +++ + ++ IA G H+A
Sbjct: 191 GEVLSWG-AAGSGRLGHG--RQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSAC 247
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
++++G +F +G+++ G G ++ P +++ + E VACG YHTC VT SGDLY
Sbjct: 248 IDEKGTLFIFGQKT--EKGFGRSNEAFRPNIVEEIPFS--EEVACGGYHTCVVTDSGDLY 303
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG-- 208
+WG + G LG G P+ + L + VS +SCG HTAV+ S ++T+G
Sbjct: 304 SWG--SNENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVI-SGDDIYTWGWG 360
Query: 209 --DGTF--------GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+GTF G LGHG+ P V K R V +CG HT A+ E
Sbjct: 361 GANGTFFEEGHSSGGQLGHGNDVDYFEPMMVPFGKNARAVHVSCGFNHTGAIYE 414
>gi|449685230|ref|XP_004210847.1| PREDICTED: serine/threonine-protein kinase Nek9-like [Hydra
magnipapillata]
Length = 1020
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 44/350 (12%)
Query: 47 LGGGLNRVGS-CFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESG 105
+ GG VG C G + PK ++ + ++ CG ++ + G+V+S G +
Sbjct: 510 IQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGEDFTIILTESGDVYSCGSDYY 569
Query: 106 GRLG-HGV-DSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLG 163
G LG G+ S+VL P IDALS + + +ACG+ H A+T G +YTWG+G + G LG
Sbjct: 570 GCLGCEGIYGSNVLTPIKIDALSKLKVVSIACGDCHVVALTNIGSVYTWGNGEH--GRLG 627
Query: 164 HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG---------TFGV 214
GN+ +P+ V P + ++ I+CG +T ++TS G L FG+ T
Sbjct: 628 LGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFGNNECNKLALNQTISF 687
Query: 215 LGHGDRKS-------VSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGK 267
G+ D+ S V++P V L+ R V A G H+A V E G+
Sbjct: 688 KGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVSMASGKSHSAVVDEF------------GR 735
Query: 268 LFTWGDGDKGRLGHGDKEAKLVPTCVAALV---EPNFCRVACGHSLTVALTTSGHVYTMG 324
L T+G G LG GD +++ P+ V+ L+ E C CG + TV T +++ G
Sbjct: 736 LLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICN--CGDNFTVVATADNQIFSWG 793
Query: 325 SPVYGQLGNPQADGKL----PNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
G+LG ++G P + G L K V +A S+ +L +
Sbjct: 794 CGENGRLGLNLSNGITKCCSPKPIFGSLHK--VVSMAARSWSTIILAERV 841
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 158/351 (45%), Gaps = 59/351 (16%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLH-PKLIDALS--NMNIELVACGEYHTCAVTLSGDLYTW 152
EVF WG GG+ H P+ +D + + IE V+ G H VT+ +LYTW
Sbjct: 462 EVFFWG---GGK----------HIPQKLDVFTGGSTAIE-VSAGFCHFAVVTIEKELYTW 507
Query: 153 GD---GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+ GT G L HGN + PKRV+ GI + CG T ++T +G +++ G
Sbjct: 508 ANIQGGTEIVGQLCHGNRAMYRTPKRVDF-FTGIPIKQAVCGEDFTIILTESGDVYSCGS 566
Query: 210 GTFGVLG----HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
+G LG +G +V P ++++L L+ V ACG H A+ +
Sbjct: 567 DYYGCLGCEGIYG--SNVLTPIKIDALSKLKVVSIACGDCHVVALTNI------------ 612
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF-CRVACGHSLTVALTTSGHVYTMG 324
G ++TWG+G+ GRLG G++ +P V + N+ ++ CG T LT++GH+ G
Sbjct: 613 GSVYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFILTSNGHLLAFG 672
Query: 325 SPVYGQLGNPQADG-----------------KLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +L Q LP V S V +A G H AV+
Sbjct: 673 NNECNKLALNQTISFKGNTDKSSTQQKVSYVTLPTPVRPLRSYRIVS-MASGKSHSAVVD 731
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD-KQVKSIACGTNFTAA 417
+ T+G G LG GD RN PSLV L + K+V CG NFT
Sbjct: 732 EFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTVV 782
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 152/320 (47%), Gaps = 22/320 (6%)
Query: 81 IACGGRHAALVNKQGEVFSW-----GEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
++ G H A+V + E+++W G E G+L HG + PK +D + + I+ C
Sbjct: 488 VSAGFCHFAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVC 547
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLG----HGNEVSHWVPKRVNGPLEGIHVSSISCG 191
GE T +T SGD+Y+ G Y G LG +G+ V P +++ L + V SI+CG
Sbjct: 548 GEDFTIILTESGDVYSCGSDYY--GCLGCEGIYGSNV--LTPIKIDA-LSKLKVVSIACG 602
Query: 192 PWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAV 250
H +T+ G ++T+G+G G LG G++ ++P+ V K V+ CG +T +
Sbjct: 603 DCHVVALTNIGSVYTWGNGEHGRLGLGNQNDFNLPQLVTLPEKYNYIVKITCGRDNTFIL 662
Query: 251 VE----VMVGNSSSSNCSSGKLFTW-GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
+ GN+ + + + ++ G+ DK L PT V L +A
Sbjct: 663 TSNGHLLAFGNNECNKLALNQTISFKGNTDKSSTQQKVSYVTL-PTPVRPLRSYRIVSMA 721
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVA 364
G S + + G + T GS +G+LG + P+ V G L+ V CG
Sbjct: 722 SGKSHSAVVDEFGRLLTFGSNTFGELGLGDYQSRNFPSLVSGLLNGKEVTICNCGDNFTV 781
Query: 365 VLTSKTEVYTWGKGANGRLG 384
V T+ ++++WG G NGRLG
Sbjct: 782 VATADNQIFSWGCGENGRLG 801
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 132/314 (42%), Gaps = 51/314 (16%)
Query: 221 KSVSIPREVESLKG-------LRTVRAACGVW----HTAAVVEVMVGNSSSSNCSSG--- 266
+S+SIP + + G + TV + W H ++V G S++ S+G
Sbjct: 435 RSLSIPDSISTKSGTNLMLPRVSTVTSEVFFWGGGKHIPQKLDVFTGGSTAIEVSAGFCH 494
Query: 267 --------KLFTW-----GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVA 313
+L+TW G G+L HG++ P V + CG T+
Sbjct: 495 FAVVTIEKELYTWANIQGGTEIVGQLCHGNRAMYRTPKRVDFFTGIPIKQAVCGEDFTII 554
Query: 314 LTTSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
LT SG VY+ GS YG LG G P +++ LSK V IACG HV LT+
Sbjct: 555 LTESGDVYSCGSDYYGCLGCEGIYGSNVLTPIKIDA-LSKLKVVSIACGDCHVVALTNIG 613
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK--QVKSIACGTNFTAAICLHKWVSGVD 428
VYTWG G +GRLG G+ +D N P LV L +K + I CG + T + + +
Sbjct: 614 SVYTWGNGEHGRLGLGNQNDFNLPQLV-TLPEKYNYIVKITCGRDNTFILTSNGHLLAFG 672
Query: 429 QSMCSGCRLPFNNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKL 488
+ C+ +L N + N S+++ + P P +P R
Sbjct: 673 NNECN--KLALNQTISFKGN--------TDKSSTQQKVSYVTLPTPVRPLR-------SY 715
Query: 489 RKTFDTDGSSHSSV 502
R G SHS+V
Sbjct: 716 RIVSMASGKSHSAV 729
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 28/291 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 180 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 287 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+L+ I AC Y H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPH 110
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 111 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 222
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 223 ------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 335
Query: 377 K 377
+
Sbjct: 336 Q 336
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 159/336 (47%), Gaps = 23/336 (6%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H AL+ +++ +G + G+LG G S V P + AL + ++L ACG HT
Sbjct: 36 LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G++Y G N G LG G+ ++ + +S G +A +T
Sbjct: 96 LVSTEGGNVYATGGN--NEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANISAALTE 153
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G +V +PR+V K + + +CG +H+A V
Sbjct: 154 DGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI--SCGYYHSAFVT--------- 202
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
GKL+T+G+ + G+LG ++ P V+ + E +VACG TV LT
Sbjct: 203 ---MEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISE-KVIQVACGGGHTVVLTEKA 258
Query: 319 HVYTMGSPVYGQLGNPQADGKLPN-RVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGK 377
VYT G +GQLG + P + + + I+CG H A++T +YT+G
Sbjct: 259 -VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGD 317
Query: 378 GANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L + +ACG
Sbjct: 318 GRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACG 353
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 144/294 (48%), Gaps = 29/294 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT +T + LY +G + N+G LG G++ + + P V L+ V +CG
Sbjct: 36 LSCGDEHTALITGNNKLYMFG--SNNWGQLGLGSKSAVYRPICVKA-LKSEKVKLAACGR 92
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGD---RKSVSIPREVESLKGLRTVRAACGVWHTAA 249
HT V T G ++ G G LG GD R S + S ++ + A + +AA
Sbjct: 93 NHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTSRHKIKQLSAGANI--SAA 150
Query: 250 VVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS 309
+ E G+LF WGD +G++G VP V V ++CG+
Sbjct: 151 LTE------------DGELFMWGDNSEGQIGLNSISNVYVPRQVT--VGKPISWISCGYY 196
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
+ +T G +YT G P G+LG P + + P V G K V ++ACG H VL
Sbjct: 197 HSAFVTMEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEK--VIQVACGGGHTVVL 254
Query: 367 TSKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
T K VYT+G+G G+LG G P+++E +KD++++ I+CG N TA I
Sbjct: 255 TEKA-VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALIT 307
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 123/244 (50%), Gaps = 26/244 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ ++ G +A + + GE+F WG+ S G++G S+V P+ + I ++CG
Sbjct: 138 IKQLSAGANISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTV--GKPISWISCGY 195
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNE--VSHWVPKRVNGPLEGIHVSSISCGPWHT 195
YH+ VT+ G LYT+G+ G LG +E ++H P+ V+G E V ++CG HT
Sbjct: 196 YHSAFVTMEGKLYTFGEP--ECGKLGLPSEQLINHRKPQLVSGISE--KVIQVACGGGHT 251
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRK-SVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
V+T ++TFG G FG LG G P +E +K + +CG HTA + +V
Sbjct: 252 VVLTEKA-VYTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITDV- 309
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEPNFCRVACG--HSL 310
G ++T+GDG G+LG G + + VPT + + VACG H L
Sbjct: 310 -----------GHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHML 358
Query: 311 TVAL 314
A+
Sbjct: 359 IFAI 362
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 28/305 (9%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL-S 126
KAL+S V+ ACG H + + G V++ G + G+LG G + LI S
Sbjct: 78 KALKSE---KVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNSFHLISFFTS 134
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I+ ++ G + A+T G+L+ WGD + G +G + + +VP++V G +S
Sbjct: 135 RHKIKQLSAGANISAALTEDGELFMWGDNSE--GQIGLNSISNVYVPRQVT---VGKPIS 189
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAACGV 244
ISCG +H+A VT G+L+TFG+ G LG + ++ R+ + + G+ + ++ ACG
Sbjct: 190 WISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLIN-HRKPQLVSGISEKVIQVACGG 248
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCR 303
HT + E V +T+G G G+LG G + P + + +
Sbjct: 249 GHTVVLTEKAV-------------YTFGQGRFGQLGLGSFIFQAPEPAILEHVKDQKIRH 295
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD--GKLPNRVEGKLSKSFVEEIACGSY 361
++CG + T +T GH+YT G +G+LG + + + SK + +ACG
Sbjct: 296 ISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGC 355
Query: 362 HVAVL 366
H+ +
Sbjct: 356 HMLIF 360
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDA 124
P LE +++I+CG H AL+ G ++++G+ G+LG G++ ++ P L
Sbjct: 282 PAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSH 341
Query: 125 LSNMNIELVACGEYHTCAVTL 145
S I LVACG H +
Sbjct: 342 FSKFIIHLVACGGCHMLIFAI 362
>gi|443710462|gb|ELU04715.1| hypothetical protein CAPTEDRAFT_111937 [Capitella teleta]
Length = 689
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 155/363 (42%), Gaps = 40/363 (11%)
Query: 78 VQNIACGGRHAALVNKQGEVFSW-----GEESGGRLGHGVDSDVLHPKLIDALSNMNIEL 132
+ ++ G A V K G + W G E G P+ ++ S + I+
Sbjct: 345 ITEVSTGRTQKAAVTKNGRLLLWETPSVGAEPSMPGATGAGGPAFIPRYLEGQSAVTIKH 404
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN--EVSHWVPKRVNGPLEGIHVSSISC 190
V+CG+ T +T G L T+G G G LGHGN +VS ++ L G VS +SC
Sbjct: 405 VSCGDLFTACLTDRGILMTFGSGAN--GCLGHGNYNDVSQ---AKIVEDLLGFEVSQVSC 459
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G H VT+ +F++G G G LG G ++S P V + + + A CGV + +
Sbjct: 460 GASHVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCSMLL 519
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLG------HGDKEAKLVPTCVAALVEPNFCRV 304
VE M LF G +L H ++ P L V
Sbjct: 520 VEPM-----------STLFCCGSNRYNKLALDRESEHVEEVHSFCPVQSLPLASQAIAMV 568
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHV 363
A G S A+ ++G YT GS +GQLG P D +P RV LSK V ++CG
Sbjct: 569 AMGTSHAAAIMSNGECYTFGSNQFGQLGIPANGDNNMPTRVLS-LSKIAVSMVSCGDTFT 627
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD-----KQVKSIAC--GTNFTA 416
+ ++Y+WGK A GRLG D +D +V KD V SI+C GT
Sbjct: 628 VAIMKDGKIYSWGKAARGRLGRLDCEDSQPAPVV--FKDVGRNVMSVVSISCSHGTTLLG 685
Query: 417 AIC 419
C
Sbjct: 686 MRC 688
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 144/344 (41%), Gaps = 52/344 (15%)
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW- 152
Q V+ WG G+ + L P S+ +I V+ G AVT +G L W
Sbjct: 320 QSRVYCWG--------GGISAPHLLPL---PSSDTHITEVSTGRTQKAAVTKNGRLLLWE 368
Query: 153 ----GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
G G G G ++P+ + G + + +SCG TA +T G L TFG
Sbjct: 369 TPSVGAEPSMPGATGAGGPA--FIPRYLEGQ-SAVTIKHVSCGDLFTACLTDRGILMTFG 425
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
G G LGHG+ VS + VE L G + +CG H AV + +
Sbjct: 426 SGANGCLGHGNYNDVSQAKIVEDLLGFEVSQVSCGASHVMAVT------------NEHDV 473
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN----FCRVACGHSLTVALTTSGHVYTMG 324
F+WG GD GRLG G +E+ P V + E C V C L ++T ++ G
Sbjct: 474 FSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGVDCSMLLVEPMST---LFCCG 530
Query: 325 SPVYGQLGNPQADGKLPNRVEG----------KLSKSFVEEIACGSYHVAVLTSKTEVYT 374
S Y +L A + VE L+ + +A G+ H A + S E YT
Sbjct: 531 SNRYNKL----ALDRESEHVEEVHSFCPVQSLPLASQAIAMVAMGTSHAAAIMSNGECYT 586
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+G G+LG D N P+ V +L V ++CG FT AI
Sbjct: 587 FGSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMVSCGDTFTVAI 630
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 10/280 (3%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+P+ LE + +++++CG A + +G + ++G + G LGHG +DV K+++ L
Sbjct: 390 IPRYLEGQSAVTIKHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVEDL 449
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+ V+CG H AVT D+++WG G + G LG G++ S P RV E +
Sbjct: 450 LGFEVSQVSCGASHVMAVTNEHDVFSWGRG--DNGRLGLGHQESCCSPCRVPLMPETQPI 507
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
S++ +V LF G + L DR+S + EV S ++++ A
Sbjct: 508 SALCGVDCSMLLVEPMSTLFCCGSNRYNKLAL-DRESEHV-EEVHSFCPVQSLPLA---- 561
Query: 246 HTAAVVEVMVGNS-SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
+ A+ V +G S +++ S+G+ +T+G G+LG +PT V +L + V
Sbjct: 562 -SQAIAMVAMGTSHAAAIMSNGECYTFGSNQFGQLGIPANGDNNMPTRVLSLSKIAVSMV 620
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
+CG + TVA+ G +Y+ G G+LG + P V
Sbjct: 621 SCGDTFTVAIMKDGKIYSWGKAARGRLGRLDCEDSQPAPV 660
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 98/230 (42%), Gaps = 22/230 (9%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D S K +E + +V ++CG H V + +VFSWG GRLG G P +
Sbjct: 439 DVSQAKIVEDLLGFEVSQVSCGASHVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRV 498
Query: 123 DALSNMNIELVACGEYHTCAVTL---SGDLYTWGDGTYNFGLLG----HGNEVSHWVPKR 175
+ CG C++ L L+ G YN L H EV + P +
Sbjct: 499 PLMPETQPISALCGV--DCSMLLVEPMSTLFCCGSNRYNKLALDRESEHVEEVHSFCPVQ 556
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
+ PL ++ ++ G H A + S G+ +TFG FG LG ++P V SL +
Sbjct: 557 -SLPLASQAIAMVAMGTSHAAAIMSNGECYTFGSNQFGQLGIPANGDNNMPTRVLSLSKI 615
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
+CG T A+++ GK+++WG +GRLG D E
Sbjct: 616 AVSMVSCGDTFTVAIMK------------DGKIYSWGKAARGRLGRLDCE 653
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYG-QLGNPQADGK-----LPNRVEGKLSKSFV 353
+ V+ G + A+T +G + +P G + P A G +P +EG+ S +
Sbjct: 344 HITEVSTGRTQKAAVTKNGRLLLWETPSVGAEPSMPGATGAGGPAFIPRYLEGQ-SAVTI 402
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+ ++CG A LT + + T+G GANG LGHG+ +D + +VE L +V ++CG +
Sbjct: 403 KHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNYNDVSQAKIVEDLLGFEVSQVSCGAS 462
Query: 414 FTAAIC----LHKWVSGVD--------QSMCSGCRLPF 439
A+ + W G + +S CS CR+P
Sbjct: 463 HVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPL 500
>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
CCMP2712]
Length = 312
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 152/322 (47%), Gaps = 22/322 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL--HPKLIDALSNMNIELVAC 135
V +A GG H + G V + G +LG G + P+ + L + +AC
Sbjct: 8 VVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMAC 67
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ H L G +Y+WG G+ G LG GN S P +V+G E VS ++ G +H+
Sbjct: 68 GDAHNLVRCLDGSVYSWGLGSS--GRLGLGNFKSVPQPCKVSGLGEERCVS-VAAGYYHS 124
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL---KGLRTVRAACGVWHTAAVVE 252
V G+LF +G+GT G LG G +S P +VE + R VR G +H+ + +
Sbjct: 125 FAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRG--GEYHSLGMTD 182
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
V G L++WG + G+LGHGD+E P ++ LV +CG + V
Sbjct: 183 V------------GSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNV 230
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEV 372
A++ V++ G+ YGQLG+ ++ + V ++CG HV L K +
Sbjct: 231 AISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRI 290
Query: 373 YTWGKGANGRLGHGDTDDRNSP 394
+ WG +G LG GD R +P
Sbjct: 291 WAWGCNESGCLGIGDNIPRLAP 312
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 15/242 (6%)
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG--DRKSVSIPREVESLKGLRT 237
L G HV ++ G HT +T AG++ G LG G R++ P++V +L+ R
Sbjct: 3 LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRV 62
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
V ACG H C G +++WG G GRLG G+ ++ P V+ L
Sbjct: 63 VEMACGDAHNLV------------RCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLG 110
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEI 356
E VA G+ + A+ G ++ G+ GQLG + + P +VE + +
Sbjct: 111 EERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAV 170
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
G YH +T +++WG +G+LGHGD + P + L ++ +CG NF
Sbjct: 171 RGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNV 230
Query: 417 AI 418
AI
Sbjct: 231 AI 232
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 22/316 (6%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGI 183
L+ ++ VA G HT +T +G + G + Y G G E P++V+ L
Sbjct: 3 LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGP-EPQQVS-TLRWK 60
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG 243
V ++CG H V G ++++G G+ G LG G+ KSV P +V L R V A G
Sbjct: 61 RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAG 120
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
+H+ AV+E GKLF WG+G G+LG G E+ P V R
Sbjct: 121 YYHSFAVME------------GGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWR 168
Query: 304 -VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG--KLSKSFVEEIACGS 360
V G ++ +T G +++ G GQLG+ D + R +G +L + + +CG
Sbjct: 169 AVRGGEYHSLGMTDVGSLWSWGLNNDGQLGH--GDEERCGRPKGISELVGTKISCFSCGP 226
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
+++ ++V++WG G+LGHGD ++ +L V S++CG +
Sbjct: 227 NFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDR 286
Query: 421 HK--WVSGVDQSMCSG 434
W G ++S C G
Sbjct: 287 KGRIWAWGCNESGCLG 302
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK + V + +CG ++ +VFSWG G+LGHG + + L
Sbjct: 208 PKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSH 267
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP 173
+ V+CG H + G ++ W G G LG G+ + P
Sbjct: 268 GPLVLSVSCGGRHVLGLDRKGRIWAW--GCNESGCLGIGDNIPRLAP 312
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 163/346 (47%), Gaps = 27/346 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV-DSDVLHPKLIDALSNMNIELVAC- 135
++++A G A+V G VF+ G G+ G+G + V+ + ALS + I +VA
Sbjct: 499 IRDVAGGNEVLAVVMNDGGVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAA 558
Query: 136 -GEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSH-WVPKRVNGPLEGIHVSSISCGP 192
G H AV G +++WG YN G LG G+ +S P+ ++ E H+++ +
Sbjct: 559 NGCEHMLAVASDGAVFSWG---YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSY 615
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H+AVV+S G+L TFG G LG + P+ V++L +AACG++HT A
Sbjct: 616 HHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAAT- 674
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV---EPNFCRVACGHS 309
S G+++++G D G+LG G P V + + V+CG+
Sbjct: 675 -----------SDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYY 723
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
TV ++ G + T G YGQLG + K + S ++ +CG YH +L S
Sbjct: 724 HTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILMSN 783
Query: 370 TEVYTWGKGANGRLGHG----DTDDRNSPSLVEALKDKQVKSIACG 411
V +G+ G+LG G + D P +L + +V IA G
Sbjct: 784 GRVMVFGRNNKGQLGAGARTLSSADLPLPVPSNSLANDEVVRIAAG 829
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 159/344 (46%), Gaps = 38/344 (11%)
Query: 45 GVLGGGLNRVGSC----FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSW 100
GV GLN+ G C F ++ + P S + + + A G H V G VFSW
Sbjct: 517 GVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSW 576
Query: 101 GEESGGRLGHGVDSDVLH-PKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN 158
G G+LG G H P++ID+L +I A +H+ V+ +G+L T+G +
Sbjct: 577 GYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFG--MND 634
Query: 159 FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 218
G LG + P+ V+ L V+ +CG +HT TS G++++FG +G LG G
Sbjct: 635 CGQLGLDHTQHQHTPQVVDA-LSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLG 693
Query: 219 DRKSVSIPREVESLKGL---RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGD 275
+++ P V++ G + V +CG +HT + E GKL TWG D
Sbjct: 694 HARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISE------------KGKLITWGRND 741
Query: 276 KGRLGHGDKE----AKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
G+LG G KE A+ VP +++ ++ C C HSL L ++G V G GQL
Sbjct: 742 YGQLGIGSKEHKNSAQFVPLPMSSKIKNASC--GCYHSLI--LMSNGRVMVFGRNNKGQL 797
Query: 332 GN-----PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
G AD LP L+ V IA G Y +LT ++
Sbjct: 798 GAGARTLSSADLPLPVP-SNSLANDEVVRIAAGFYSSYILTGRS 840
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 152/338 (44%), Gaps = 26/338 (7%)
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
++ E+FS G+ + G L G + + + S I VA G V G ++T
Sbjct: 462 EECELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTC 521
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC--GPWHTAVVTSAGQLFTFGDG 210
G G G+G + L GI +S ++ G H V S G +F++G
Sbjct: 522 G--LNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYN 579
Query: 211 TFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LG G S S PR ++SL+ + A +H +AVV S+G+L
Sbjct: 580 DRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVS-----------SNGELL 628
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
T+G D G+LG + + P V AL + ACG TVA T+ G VY+ G YG
Sbjct: 629 TFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYG 688
Query: 330 QLGNPQA-DGKLPNRVEGKLSKS--FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
QLG A + K P V+ L +S + ++CG YH ++ K ++ TWG+ G+LG G
Sbjct: 689 QLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 748
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+ +NS V ++K+ +CG C H +
Sbjct: 749 SKEHKNSAQFVPLPMSSKIKNASCG-------CYHSLI 779
>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
Length = 1386
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/407 (26%), Positives = 184/407 (45%), Gaps = 79/407 (19%)
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
N+ +VF WG GR G+G +S P A ++ N ++CG +H+ AVT G + +
Sbjct: 932 NQSYKVFVWGSGKDGRCGNGKESSEKLPN--QANTSHNFTQLSCGYHHSAAVTSDGMILS 989
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG G FG LGHG+ ++ +P + L I + +SCG H+ ++S G++F++G G
Sbjct: 990 WGRGI--FGQLGHGDTENYSLPTPIEA-LVKIQIIQVSCGWQHSMALSSQGRIFSWGYGE 1046
Query: 212 FGVLGHGDRKSVSIPREVESLK--GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G LGHGD +P+E++ + + ACG H+ + ++ S +L+
Sbjct: 1047 DGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCI----------TDGQSSQLY 1096
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAAL-----------------VEPNFCRVACGHSLTV 312
WG RL + E +L+PT +EP C ++ G + T
Sbjct: 1097 LWGCNPDCRLMIEENENQLLPTLTILEQAKMKNYERGDQLKLEGLEP--CYLSLGVTHTA 1154
Query: 313 ALTTSGHVYTMGSPVYGQLG-------------------------------NPQADGK-- 339
+T SG +YT GS + GQLG N D K
Sbjct: 1155 IVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKEL 1214
Query: 340 ----LP-NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
LP RV+ +++ +++CG VL + EVY +GK ++GRLG G+ + N
Sbjct: 1215 KSQSLPIYRVDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQ 1274
Query: 395 ---SLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQ--SMCSGCR 436
L ++++++ +S + A L + +S ++ + +GCR
Sbjct: 1275 KTNQLKQSIQNQTYQSTEGSNDCIAEPQLLQSLSQSEKVVQISAGCR 1321
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 193/472 (40%), Gaps = 114/472 (24%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
VF+WG G DG G G +SS ++ + ++CG H+A V
Sbjct: 937 VFVWGSGK-DGRCGNG-----------KESSEKLPNQANTSHNFTQLSCGYHHSAAVTSD 984
Query: 95 GEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD 154
G + SWG G+LGHG + P I+AL + I V+CG H+ A++ G +++WG
Sbjct: 985 GMILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGY 1044
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEG-IHVSSISCGPWHTAVVT--SAGQLFTFGDG- 210
G G LGHG+ + +PK ++ + I+V I+CG H+ +T + QL+ +G
Sbjct: 1045 GED--GQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNP 1102
Query: 211 ---------------TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
T +L K+ +++ L+GL + GV HTA V
Sbjct: 1103 DCRLMIEENENQLLPTLTILEQAKMKNYERGDQLK-LEGLEPCYLSLGVTHTAIV----- 1156
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK--------------LVPTCVAALV---- 297
SG+L+T G G+LG + AK L+ ++ +
Sbjct: 1157 -------TRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFK 1209
Query: 298 --------------------EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----- 332
+ +V+CG + T+ L VY G +G+LG
Sbjct: 1210 DQKELKSQSLPIYRVDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQ 1269
Query: 333 --NPQADGKLPNRVEGKLSKSF---------------------VEEIACGSYHVAVLTSK 369
N Q +L ++ + +S V +I+ G H A +T
Sbjct: 1270 NLNQQKTNQLKQSIQNQTYQSTEGSNDCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDS 1329
Query: 370 TEVYTWGKGANGRLGHGDTD-DRNSPSLV-EALKDKQVKSIACGTNFTAAIC 419
++Y WG +LG GD++ D + P+ V + L+ +VK ++CG T A+
Sbjct: 1330 GKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYFHTGALV 1381
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 172/420 (40%), Gaps = 102/420 (24%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G + WG G G LG G + SLP +E+ V + + ++CG +H+ ++
Sbjct: 985 GMILSWGRGIF-GQLGHGDTE---------NYSLPTPIEALVKIQIIQVSCGWQHSMALS 1034
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL--SNMNIELVACGEYHTCAVT--LSGD 148
QG +FSWG G+LGHG +D L PK ID +++N+ ++ACG H+ +T S
Sbjct: 1035 SQGRIFSWGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQ 1094
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVP--------KRVNGP------LEGIHVSSISCGPWH 194
LY WG + L+ NE + +P K N LEG+ +S G H
Sbjct: 1095 LYLWGCNP-DCRLMIEENE-NQLLPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTH 1152
Query: 195 TAVVTSAGQLFTFG---DGTFGVLGHGDRKSVSIPRE---------------VESLKGLR 236
TA+VT +G+L+T G DG GV + S P + K +
Sbjct: 1153 TAIVTRSGELYTGGSMLDGQLGVNYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQK 1212
Query: 237 TVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT-----------WGDGDKGRLGHGD-- 283
+++ + V+ + ++ S G FT +G GRLG G+
Sbjct: 1213 ELKSQSLPIYR---VDFFSAQNKATQVSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQ 1269
Query: 284 -----KEAKLVPT--------------CVAALVEPNFCR------------VACGHSLTV 312
K +L + C+A EP + C H+ V
Sbjct: 1270 NLNQQKTNQLKQSIQNQTYQSTEGSNDCIA---EPQLLQSLSQSEKVVQISAGCRHAACV 1326
Query: 313 ALTTSGHVYTMGSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
T SG +Y G Y QLG + + D +P +V L S V+ ++CG +H L +T
Sbjct: 1327 --TDSGKLYAWGFNFYEQLGLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYFHTGALVQQT 1384
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 312 VALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT 370
V S V+ GS G+ GN ++ KLPN + S +F + ++CG +H A +TS
Sbjct: 929 VNKNQSYKVFVWGSGKDGRCGNGKESSEKLPN--QANTSHNFTQ-LSCGYHHSAAVTSDG 985
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSG 426
+ +WG+G G+LGHGDT++ + P+ +EAL Q+ ++CG + A+ + W G
Sbjct: 986 MILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYG 1045
Query: 427 VDQSMCSG----CRLPFN-NFKRKRHNCYNCGLVFC-HSCS 461
D + G LP +F RK N N G++ C HS S
Sbjct: 1046 EDGQLGHGDTNDYLLPKEIDFFRK--NSINVGMIACGHSHS 1084
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 15/215 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDALSNMNIELVAC 135
++ I CG H+ ++K GE+F+WG+ G+LG G + + P++++ LS + + ++
Sbjct: 123 NIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISA 182
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
GE H+ A+++SG++Y+WG + G LG G+ + P + L+ V ++CG HT
Sbjct: 183 GEAHSMALSMSGNVYSWGRN--DCGQLGLGHTYNKDSPSCIET-LDDQKVEFLACGGCHT 239
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A++T +G +FTFGDG +G LGH ++ PR V L G R + ACG HT A V
Sbjct: 240 ALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYV---- 295
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
+GK+F++G G +G+LG+G +L+P
Sbjct: 296 -------SDTGKVFSFGSGKEGQLGNGGTRNQLIP 323
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 29/278 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I M I + GE H ++ G + Y + + H R
Sbjct: 73 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFE-----YKYS-------IEH---ARFQC 117
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRT 237
L+ ++ I+CG +H+ ++ G+LF +G G LG G S S P VE+L G+
Sbjct: 118 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 177
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
V+ + G H+ A+ SG +++WG D G+LG G K P+C+ L
Sbjct: 178 VQISAGEAHSMAL------------SMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLD 225
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ +ACG T LT SG V+T G YGQLG+ +L R+ L + V +IA
Sbjct: 226 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 285
Query: 358 CGSYHVAVLTSKT-EVYTWGKGANGRLGHGDTDDRNSP 394
CG H S T +V+++G G G+LG+G T ++ P
Sbjct: 286 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 323
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 13/196 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ DG LG VG F +S P+ +E+ + + I+ G H+ ++
Sbjct: 141 GELFAWGQNL-DGQLG-----VGRIFA---STSTPEIVENLSGVPLVQISAGEAHSMALS 191
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G V+SWG G+LG G + P I+ L + +E +ACG HT +T SG ++T+
Sbjct: 192 MSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTF 251
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
GDG Y G LGH + + P+ V G L G V+ I+CG HT A V+ G++F+FG G
Sbjct: 252 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 308
Query: 212 FGVLGHGDRKSVSIPR 227
G LG+G ++ IPR
Sbjct: 309 EGQLGNGGTRNQLIPR 324
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + + H + L
Sbjct: 73 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQ 120
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
NI + CG+YH+ A++ G+L+ WG G LG G + + L G+ +
Sbjct: 121 EKNIIQITCGDYHSLALSKGGELFAWGQNLD--GQLGVGRIFASTSTPEIVENLSGVPLV 178
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G G LG G + P +E+L + ACG H
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCH 238
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + SG +FT+GDG G+LGH + +L P V LV ++AC
Sbjct: 239 TALLTK------------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIAC 286
Query: 307 GHSLTVA-LTTSGHVYTMGSPVYGQLGN 333
G T+A ++ +G V++ GS GQLGN
Sbjct: 287 GRQHTLAYVSDTGKVFSFGSGKEGQLGN 314
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+ + S+ G H V++S G+ F + + S+ R L+ ++ C
Sbjct: 82 MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 129
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G +H+ A+ G+LF WG G+LG G A P V L
Sbjct: 130 GDYHSLAL------------SKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 177
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+++ G + ++AL+ SG+VY+ G GQLG K L VE +ACG
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGC 237
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
H A+LT V+T+G G G+LGH T + P LV L +V IACG T A
Sbjct: 238 HTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 293
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 296 LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ--ADGKLPNRVEGKLSKSFV 353
L E N ++ CG ++AL+ G ++ G + GQLG + A P VE LS +
Sbjct: 119 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVEN-LSGVPL 177
Query: 354 EEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
+I+ G H L+ VY+WG+ G+LG G T +++SPS +E L D++V+ +ACG
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGC 237
Query: 414 FTAAI 418
TA +
Sbjct: 238 HTALL 242
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 28/291 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 41 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 97 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 156 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 262
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 263 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG AVV+ +G+++
Sbjct: 157 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G+ + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 273 QSYPTPVTVEKDRIIEIAACHSTHTSA 299
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 92 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 151 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 134/267 (50%), Gaps = 22/267 (8%)
Query: 146 SGDLYTWG-DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS-SISCGPWHTAVVTSAGQ 203
+GD+Y G +G G LG G+ S PK + + V + GP H VT +G+
Sbjct: 40 NGDVYALGFNGN---GCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGP-HVLAVTDSGE 95
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
L+++G G +G LGH + S P V K + ++ ACG +H+ A+ E
Sbjct: 96 LYSWGHGGYGQLGHTSEEK-SKPVLVYMQK--KVIQVACGSYHSIALTE----------- 141
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G+++ WG + G+LG G + P V+ + V+CG S TV LTT G +Y+
Sbjct: 142 -DGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSW 200
Query: 324 GSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGR 382
G GQLG +L P RV G L F+E+I CG HV VLT E+Y+WG + G+
Sbjct: 201 GYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQ 260
Query: 383 LGHGDTDDRNSPSLVEALKDKQVKSIA 409
LG G T + + P+L+ D + IA
Sbjct: 261 LGLGTTHNTSVPTLINTTTDDRWSDIA 287
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 147/324 (45%), Gaps = 37/324 (11%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL 121
+ SSL ++ A V G A L G+V++ G G LG G S L PK+
Sbjct: 13 IPSSLATKVKKAFVF-----GGAGNEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKI 67
Query: 122 IDALSNMNIELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNE-----VSHWVPKR 175
I+ L +I +A G H AVT SG+LY+WG G Y G LGH +E V ++ K+
Sbjct: 68 IEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGY--GQLGHTSEEKSKPVLVYMQKK 125
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V ++CG +H+ +T G+++ +G G LG G + + P+ V +
Sbjct: 126 ---------VIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSK 176
Query: 236 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 295
+ V +CG T + + G+L++WG G+LG + +L P V
Sbjct: 177 KIVSVSCGQSFTVMLT------------TDGELYSWGYNGNGQLGIENNTNQLQPVRVTG 224
Query: 296 LVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFV 353
+ F ++ CG + + LT G +Y+ G+ YGQLG + +P + +
Sbjct: 225 SLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVPTLINTTTDDRWS 284
Query: 354 EEIACGSYHVAV-LTSKTEVYTWG 376
+ A H++ +T ++Y WG
Sbjct: 285 DIAAHHYNHISAGVTISGKIYMWG 308
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 33/244 (13%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD--VQNIACGGRHAAL 90
G+++ WG G G G LG +S K+ V + V +ACG H+
Sbjct: 94 GELYSWGHG-GYGQLG--------------HTSEEKSKPVLVYMQKKVIQVACGSYHSIA 138
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
+ + GEV++WG + G+LG G+ ++ PK + + + I V+CG+ T +T G+LY
Sbjct: 139 LTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELY 198
Query: 151 TWGDGTYN-FGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
+WG YN G LG N + P RV G L G + I CG H V+T G+L+++G
Sbjct: 199 SWG---YNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGA 255
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW-HTAAVVEVMVGNSSSSNCSSGKL 268
++G LG G + S+P + + R A + H +A V + SGK+
Sbjct: 256 NSYGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHISAGVTI-----------SGKI 304
Query: 269 FTWG 272
+ WG
Sbjct: 305 YMWG 308
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV-AL 314
GN + ++G ++ G G LG GD + L P + L + + ++A G V A+
Sbjct: 31 GNEALLTLTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAV 90
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYT 374
T SG +Y+ G YGQLG+ + P V + V ++ACGSYH LT EVY
Sbjct: 91 TDSGELYSWGHGGYGQLGHTSEEKSKPVLV---YMQKKVIQVACGSYHSIALTEDGEVYA 147
Query: 375 WGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKW 423
WG G+LG G ++++ +P V + K++ S++CG +FT + L+ W
Sbjct: 148 WGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSW 200
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 125
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 126 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 184
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 185 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 243
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 291
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 292 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ I AC Y H T G+++T
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLATTEGEVFT 127
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 128 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 185
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG AVV+ +G+++
Sbjct: 186 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYV 233
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G+ + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 234 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 293
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 294 LGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 20/268 (7%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTF 212
GT G LG G+ S P+R++ L G ++ +S GP H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAY 133
Query: 213 GVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG+G +P + + L + + ACG +H+ + S G++F W
Sbjct: 134 SQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAW 181
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G + G++G G + +P V ++ +ACG +A+ +G VY G GQ
Sbjct: 182 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 241
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + P RV L V+ +ACG H VLT + +VY WG + G+LG G+
Sbjct: 242 LGLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 300
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
+++ P+ V KD+ ++ AC + T+A
Sbjct: 301 NQSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 120
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 121 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 239
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 28/291 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L+ + IAC G H L +GEV
Sbjct: 41 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 97 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG
Sbjct: 156 -NSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 262
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 263 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG AVV+ +G+++
Sbjct: 157 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G+ + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 273 QSYPTPVTVEKDRIIEIAACHSTHTSA 299
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 92 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 151 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 58 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 113
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 114 FTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 172
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V + G++F +G G LG
Sbjct: 173 -NSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 231
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 232 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 279
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 280 GQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 328
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 59 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLATTEGEVFT 115
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G + VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 116 WGHNAYS--QLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 173
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV ++G++F
Sbjct: 174 SGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVV------------NTGEVFV 221
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 222 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 281
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 282 LGTGNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 329
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 64 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 122
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G + +P + + L + + ACG +H+ + S G++F WG
Sbjct: 123 QLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 170
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G V+ G GQL
Sbjct: 171 YNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQL 230
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 231 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 289
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 290 QSYPTPVVVEKDRIIEIAACHSAHTSA 316
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 59 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 108
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G A LVP ++ L VACG ++ LT+ G V+
Sbjct: 109 -TEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 167
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + + EV+ WG N
Sbjct: 168 AWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN 227
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 228 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 265
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L+S VV+ NIACG +
Sbjct: 164 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQSKVVV---NIACGQMCS 210
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEVF WG G+LG G + P + AL + ++ VACG HT +T G
Sbjct: 211 MAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 270
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 271 VYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMW 327
Query: 208 GD 209
G
Sbjct: 328 GQ 329
>gi|156398544|ref|XP_001638248.1| predicted protein [Nematostella vectensis]
gi|156225367|gb|EDO46185.1| predicted protein [Nematostella vectensis]
Length = 676
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 140/297 (47%), Gaps = 30/297 (10%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG--NEVSHWVPKRVNGPLEGIHVSSISC 190
V+CG VT +G + W +G+ + GL+ G NE + WVP+ + G GI ++ +SC
Sbjct: 343 VSCGRTLMTGVTANGRMILW-EGSKSSGLMSSGGKNEKTVWVPRFLEGQ-SGITITKVSC 400
Query: 191 GPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAV 250
G TA +T G L TFG GT+G LGHG VS + VE L G +CG H AV
Sbjct: 401 GDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAV 460
Query: 251 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHS 309
+ ++F WG GD GRLG G ++ P + +L E R V CG
Sbjct: 461 T------------ADHEVFAWGRGDNGRLGTGSQQEYWSPKAI-SLPEGMRARSVHCGVD 507
Query: 310 LTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE--------IACGSY 361
+ A+T + GS +L DG P L + V + +A G+
Sbjct: 508 CSFAITLENKLLACGSNRCNKLALDNEDG--PVEEVAVLRQVSVPDFNSVGTSSVAMGTS 565
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
H VL ++Y++G + G+LG+ P LVE+L D V +ACG F+ A+
Sbjct: 566 HTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLND--VSYVACGDTFSVAV 620
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 159/345 (46%), Gaps = 32/345 (9%)
Query: 78 VQNIACGGRHAALVNKQGEVFSW-GEESGGRLGHGVDSD--VLHPKLIDALSNMNIELVA 134
V ++CG V G + W G +S G + G ++ V P+ ++ S + I V+
Sbjct: 340 VVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGITITKVS 399
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG--NEVSHWVPKRVNGPLEGIHVSSISCGP 192
CG+ T +T G L T+G GTY G LGHG N VS ++ L G V ISCG
Sbjct: 400 CGDLFTACLTDRGILMTFGSGTY--GCLGHGTTNYVSQ---AKIVEDLLGFEVEDISCGS 454
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
H VT+ ++F +G G G LG G ++ P+ + +G+R CGV
Sbjct: 455 SHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGV-------- 506
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE-PNF-----CRVAC 306
+ S + KL G +L +++ + V V P+F VA
Sbjct: 507 ----DCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAM 562
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNP-QADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G S T+ L +G +Y+ GS +GQLG + + P VE S + V +ACG
Sbjct: 563 GTSHTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVE---SLNDVSYVACGDTFSVA 619
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
++S +EV+ WGKGA GRLG+ +D P + QV S++C
Sbjct: 620 VSSDSEVFVWGKGARGRLGNKADEDVREPVCLSLPAAVQVLSVSC 664
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 23/274 (8%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+P+ LE + + ++CG A + +G + ++G + G LGHG + V K+++ L
Sbjct: 383 VPRFLEGQSGITITKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDL 442
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
+E ++CG H AVT +++ WG G + G LG G++ +W PK ++ P EG+
Sbjct: 443 LGFEVEDISCGSSHIMAVTADHEVFAWGRG--DNGRLGTGSQQEYWSPKAISLP-EGMRA 499
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLG----HGDRKSVSIPREVE--SLKGLRTVR 239
S+ CG + +T +L G L G + V++ R+V + T
Sbjct: 500 RSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFNSVGTSS 559
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
A G HT +++ +GKL+++G G+LG+ + P V +L +
Sbjct: 560 VAMGTSHTLVLLQ------------NGKLYSFGSNSFGQLGYVREGVSRFPQLVESLNDV 607
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
++ VACG + +VA+++ V+ G G+LGN
Sbjct: 608 SY--VACGDTFSVAVSSDSEVFVWGKGARGRLGN 639
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 115/253 (45%), Gaps = 21/253 (8%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
S K +E + +V++I+CG H V EVF+WG GRLG G + PK I
Sbjct: 434 SQAKIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISL 493
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLL----GHGNEVSHWVPKRVNGP- 179
M V CG + A+TL L G N L G EV+ V ++V+ P
Sbjct: 494 PEGMRARSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVA--VLRQVSVPD 551
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
+ SS++ G HT V+ G+L++FG +FG LG+ P+ VESL + V
Sbjct: 552 FNSVGTSSVAMGTSHTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLNDVSYV- 610
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG + AV S ++F WG G +GRLG+ E P C++
Sbjct: 611 -ACGDTFSVAV------------SSDSEVFVWGKGARGRLGNKADEDVREPVCLSLPAAV 657
Query: 300 NFCRVACGHSLTV 312
V+C +S T+
Sbjct: 658 QVLSVSCSNSGTL 670
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 246 HTAAVVEVMVGNSSSSNCSS-GKLFTW-GDGDKGRLGHGDKEAKLV--PTCVAALVEPNF 301
H + VV+V G + + ++ G++ W G G + G K K V P +
Sbjct: 336 HDSGVVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGITI 395
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+V+CG T LT G + T GS YG LG+ + ++ L VE+I+CGS
Sbjct: 396 TKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSS 455
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
H+ +T+ EV+ WG+G NGRLG G + SP + + + +S+ CG + + AI L
Sbjct: 456 HIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLE 515
Query: 422 KWVSGVDQSMCSGCRLPFNN 441
+ + C+ +L +N
Sbjct: 516 NKLLACGSNRCN--KLALDN 533
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
S P+ +ES + DV +ACG + V+ EVF WG+ + GRLG+ D DV P +
Sbjct: 595 SRFPQLVES--LNDVSYVACGDTFSVAVSSDSEVFVWGKGARGRLGNKADEDVREPVCLS 652
Query: 124 ALSNMNIELVAC 135
+ + + V+C
Sbjct: 653 LPAAVQVLSVSC 664
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 125
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 126 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 184
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ ++ +P+RV G L+ V +I+CG V +G+++ +G G LG
Sbjct: 185 -NSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 243
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 291
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 292 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+LS I AC Y H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPH 115
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 116 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 173
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 227
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 228 ------SGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 282 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 340
Query: 377 K 377
+
Sbjct: 341 Q 341
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 134
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 135 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 182
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ SG VY G GQL
Sbjct: 183 YNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQL 242
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 243 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 302 QSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 120
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 121 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 180 AWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN 239
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 25/266 (9%)
Query: 67 PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
P+ L+S L+ + IAC G H L +GEVF+WG + +LG+G + L P I
Sbjct: 65 PRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121
Query: 123 DA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
LSN + VACG YH+ +T G+++ WG N G +G G+ V+ +P+RV G L+
Sbjct: 122 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTVNQPIPRRVTGCLQ 179
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V +I+CG V G+++ +G G LG G+ + P V +L+G+R R A
Sbjct: 180 NKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 239
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HT + + G+++ WG G+LG G+K + PT V + +
Sbjct: 240 CGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPV-TVEKDRI 286
Query: 302 CRVACGHS--LTVALTTSGHVYTMGS 325
+A HS + A T GHVY G
Sbjct: 287 IEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG AVV+ +G+++
Sbjct: 157 SGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G+ + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVRSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 273 QSYPTPVTVEKDRIIEIAACHSTHTSA 299
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 42 EIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKI---ACLSYGSGPHIVLAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 92 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 151 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 176/388 (45%), Gaps = 61/388 (15%)
Query: 56 SCFGVKMD---SSLPKALESAVVLDVQNIACGGRHAALV---NKQ----GEVFSWGEESG 105
+C G +D S PK + + +ACG H+A++ +KQ G VF++G +
Sbjct: 1024 NCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFTFGLGNS 1083
Query: 106 GRLGHGVD--SDVLHPK--------------------LIDALSNMNIELVACGEYHTCAV 143
GRLG+ +D SDVL + L L N + +ACG HT
Sbjct: 1084 GRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVS-IACGANHTLVT 1142
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
T+ G +Y+WG G Y G+LG G+ + + P +V P + I +S G H+ + G
Sbjct: 1143 TVDGCVYSWGMGAY--GVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGN 1200
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++++G G G LG G ++ P + + +CG H+A +
Sbjct: 1201 VWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRF---------- 1250
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
G ++TWG G+LG G + ++ P V +L + ++ACG T+AL+ SG +Y
Sbjct: 1251 --GTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQ 1308
Query: 323 MGSPVYGQLG-NPQADGKL------PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G LG N Q++G + P V K+ IA G Y A + ++ TW
Sbjct: 1309 WGC----TLGFNKQSEGLISNIDYVPQPVPDTGFKNVF--IAAGPYSCAAINIFGDLLTW 1362
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDK 403
G G RLGHGD+ D +P V L+ +
Sbjct: 1363 GLGTGYRLGHGDSKDHVAPKFVSHLRTR 1390
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 187/453 (41%), Gaps = 78/453 (17%)
Query: 11 VSLSSAVSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGG--LNRVGSCFGVKMDSSLP 67
+ L +A+ S + G+ H + G V+ WG G GVLG G NR
Sbjct: 1123 IGLRNAIVSIACGANHTLVTTVDGCVYSWGMG-AYGVLGTGSVANRYNPV---------- 1171
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
K + + + + G RH+ ++K+G V+SWG GRLG G + P LI
Sbjct: 1172 KVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDT 1231
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ ++CG+ H+ + G +YTW G G LG G VS + V L+G H+
Sbjct: 1232 YEVFQISCGDSHSACLDRFGTVYTW--GCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQ 1289
Query: 188 ISCGPWHTAVVTSAGQLFT------FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
I+CG +T ++++G+++ F + G++ + D +P G + V A
Sbjct: 1290 IACGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNIDYVPQPVPD-----TGFKNVFIA 1344
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV---- 297
G + AA+ G L TWG G RLGHGD + + P V+ L
Sbjct: 1345 AGPYSCAAI------------NIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIY 1392
Query: 298 ----------------------------EPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
E ++A G V LT +G VYT G V
Sbjct: 1393 IDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWG--VNN 1450
Query: 330 QLGNPQADGKLPNRVEGKLSKSF---VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
G ++ + E L F + +IACGS H +T ++TWG NG+LG G
Sbjct: 1451 GTGYNSTKDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQG 1510
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
D R P V +++ ++ G + + IC
Sbjct: 1511 DLRSRVIPDHVPYIEN--CINVFAGVDNSGCIC 1541
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 121/257 (47%), Gaps = 30/257 (11%)
Query: 204 LFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++++G F LG G D + P+ + G + + ACG +H+A +V +SS +
Sbjct: 1015 VYSWGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLV-----SSSKQH 1069
Query: 263 CSSGKLFTWGDGDKGRLG-HGDKEAKLVPTCVAA--LVEPNFCR---------------- 303
++G +FT+G G+ GRLG H D + ++ + EP++C
Sbjct: 1070 PNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAI 1129
Query: 304 --VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGS 360
+ACG + T+ T G VY+ G YG LG + P +V F+ + GS
Sbjct: 1130 VSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGS 1189
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
H L + V++WG G NGRLG G T + +P+L+ +V I+CG + +A CL
Sbjct: 1190 RHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSA--CL 1247
Query: 421 HKWVSGVDQSMCSGCRL 437
++ + C G +L
Sbjct: 1248 DRFGTVYTWGCCRGGKL 1264
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 139/331 (41%), Gaps = 66/331 (19%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS------- 200
++Y+WG +N LG G +VS ++ G ++ ++CG +H+AV+ S
Sbjct: 1014 NVYSWGKVPFN--CLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPN 1071
Query: 201 AGQLFTFGDGTFGVLG-HGDRKS------------------VSIPREVESLKGLR--TVR 239
AG +FTFG G G LG H D S P+ V GLR V
Sbjct: 1072 AGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVS 1131
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
ACG HT G +++WG G G LG G + P V +
Sbjct: 1132 IACGANHTLV------------TTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDN 1179
Query: 300 NFCRVAC-GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VE 354
F C G ++AL G+V++ G G+LG G N L + F V
Sbjct: 1180 IFISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGL----GSTRNYYTPNLIRIFDTYEVF 1235
Query: 355 EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTN 413
+I+CG H A L VYTWG G+LG G D P++VE+LK + IACGT
Sbjct: 1236 QISCGDSHSACLDRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTG 1295
Query: 414 FTAAIC----LHKWVSGVDQSMCSGCRLPFN 440
T A+ +++W GC L FN
Sbjct: 1296 NTLALSASGKIYQW----------GCTLGFN 1316
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 154/377 (40%), Gaps = 62/377 (16%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKL---------IDALSNM--- 128
IA G A +N G++ +WG +G RLGHG D + PK ID L +
Sbjct: 1343 IAAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDE 1402
Query: 129 --------------------NIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
I+ +A G+ H +T +G +YTWG G G
Sbjct: 1403 TPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNN------GTGYNS 1456
Query: 169 SHWVPKRVNGPLEGIHVSS----ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
+ + + P+ H SS I+CG H+ +T G LFT+G G LG GD +S
Sbjct: 1457 TKDQIESYSEPMLFNHFSSKISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRV 1516
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
IP V ++ V A GV ++ + + G L+ +G G+LG G+
Sbjct: 1517 IPDHVPYIENCINVFA--GVDNSGCICS--SNHEDFMKDDYGTLWVFGSSSCGKLGLGEA 1572
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---P 341
V T ++A G +V LT G +Y+ G+ G+LG P
Sbjct: 1573 LTSTVMTPREITTVTGVYKLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTP 1632
Query: 342 NRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL- 400
+ E K FV ++ GS H ++ E+Y WG+ G+ D P+L+E +
Sbjct: 1633 VKTEVK----FV-DVCAGSSHSLAISVDNELYGWGE---GKYICSDEKHVLEPTLMEVIP 1684
Query: 401 ----KDKQVKSIACGTN 413
+ K + ++A G +
Sbjct: 1685 SPTGEAKVISAVAAGNH 1701
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 149/336 (44%), Gaps = 48/336 (14%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ IACG H+ + G +F+WG G+LG G + P + + N I + A +
Sbjct: 1477 ISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENC-INVFAGVD 1535
Query: 138 YHTCAVT-----LSGDLY--TWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSI 188
C + D Y W G+ + G LG G ++ V P+ + + G++ +
Sbjct: 1536 NSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMTPREITT-VTGVY--KL 1592
Query: 189 SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTA 248
+ G H+ V+T G L++ G GT G LG GD + + V++ ++ V G H+
Sbjct: 1593 ALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKT--EVKFVDVCAGSSHSL 1650
Query: 249 AVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN-----FCR 303
A+ +L+ WG+ G+ D++ L PT + + P
Sbjct: 1651 AI------------SVDNELYGWGE---GKYICSDEKHVLEPTLMEVIPSPTGEAKVISA 1695
Query: 304 VACG-HSLTVALTTSGHVYTMGSPVYGQLG-----NPQADG--KLPNRVEGKLSKSFVEE 355
VA G HSL LT SG+V G+ YGQLG A+ K+P+ V + V
Sbjct: 1696 VAAGNHSL--VLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVNLDAN---VTC 1750
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
IA Y + T K + Y+WG ++ RLG G T+++
Sbjct: 1751 IATSRYFSSCSTLKGDAYSWGLSSDDRLGVGFTNNK 1786
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 161/388 (41%), Gaps = 62/388 (15%)
Query: 24 SGHDD--GDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNI 81
S H+D D G ++++G + G LG G + S++ E V V +
Sbjct: 1543 SNHEDFMKDDYGTLWVFGSSSC-GKLG---------LGEALTSTVMTPREITTVTGVYKL 1592
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD--VLHP-----KLIDALSNMNIELVA 134
A G H+ ++ +G ++S G +GGRLG G S+ V P K +D V
Sbjct: 1593 ALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTEVKFVD---------VC 1643
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL-EGIHVSSISCGPW 193
G H+ A+++ +LY WG+G Y H E + + + + P E +S+++ G
Sbjct: 1644 AGSSHSLAISVDNELYGWGEGKYICSDEKHVLEPT--LMEVIPSPTGEAKVISAVAAGN- 1700
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEV 253
H+ V+T++G + FG+ T+G LG +SI + ++ V + A V
Sbjct: 1701 HSLVLTNSGYVAAFGNNTYGQLG----VQLSIKSSANNF-----IKMPSTV-NLDANVTC 1750
Query: 254 MVGNSSSSNCSS--GKLFTWGDGDKGRLGHGDKEAKLV--PTCVA------------ALV 297
+ + S+CS+ G ++WG RLG G K+V PT + L
Sbjct: 1751 IATSRYFSSCSTLKGDAYSWGLSSDDRLGVGFTNNKVVYAPTTIVNTSMIGDMMDQFELD 1810
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEE-- 355
+ ++ +L H T P N Q K R+ ++S E+
Sbjct: 1811 SYKYTSMSGYENLINYFLDELHYST--DPQSVNWSNLQIILKNEERMTSEVSIRTFEDDL 1868
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRL 383
I C HV + + +E YT K +L
Sbjct: 1869 IKCLKTHVDFILNMSESYTRLKALQFKL 1896
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 164/337 (48%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
+ACG H A+V +++ +G + G+LG G +S V P I AL ++ VACG HT
Sbjct: 40 LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G +Y G + G LG G++ R+ + +S G +A +T
Sbjct: 100 IVATEGGKVYATGGNSE--GQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTE 157
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G + +V +P +V K + V +CG +H+A +
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWV--SCGYYHSAFIT--------- 206
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+ G+L+T+G+ + G+LG K +P V + E +VACG TV LT +
Sbjct: 207 ---TEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPE-KVIQVACGGGHTVVLTENA 262
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G +GQ LG + P +E + + I+CG H A++T +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFIFETSEPTVIE-HIKDQKISYISCGENHTALITDTGLIYTFG 320
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L + + V+ +ACG
Sbjct: 321 DGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACG 357
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
+ACG+ HT VT + LY +G + N+G LG G+E P + L+ V ++CG
Sbjct: 40 LACGDEHTAVVTGNNKLYMFG--SNNWGQLGLGSESPVSKPTCIKA-LKPEKVKFVACGR 96
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V T G+++ G + G LG GD + + ++ ++ ++A +
Sbjct: 97 THTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAAL- 155
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G+LF WGD +G++G + + VP V + V+CG+ +
Sbjct: 156 ----------TEDGELFMWGDNSEGQIGLKNIDNVCVPHQVT--IGKPISWVSCGYYHSA 203
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+TT G +YT G P G+LG P + ++P V G K V ++ACG H VLT
Sbjct: 204 FITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPEK--VIQVACGGGHTVVLTEN 261
Query: 370 TEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
VYT+G G G+LG G + + P+++E +KD+++ I+CG N TA I
Sbjct: 262 A-VYTFGLGQFGQLGLGTFIFETSEPTVIEHIKDQKISYISCGENHTALI 310
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 153/313 (48%), Gaps = 31/313 (9%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD--VLHPKLI 122
S P +++ V+ +ACG H + + G+V++ G S G+LG G D D H ++
Sbjct: 76 SKPTCIKALKPEKVKFVACGRTHTIVATEGGKVYATGGNSEGQLGLGDDEDRNTFH-RIK 134
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEG 182
S I+ ++ G + A+T G+L+ WGD + G +G N + VP +V G
Sbjct: 135 FFTSQHKIKQLSAGSSSSAALTEDGELFMWGDNSE--GQIGLKNIDNVCVPHQVTI---G 189
Query: 183 IHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS--IPREVESLKGLRTVRA 240
+S +SCG +H+A +T+ G+L+TFG+ G LG + ++ IP+ V + + ++
Sbjct: 190 KPISWVSCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPE-KVIQV 248
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEP 299
ACG HT + E V +T+G G G+LG G + PT + + +
Sbjct: 249 ACGGGHTVVLTENAV-------------YTFGLGQFGQLGLGTFIFETSEPTVIEHIKDQ 295
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKL---SKSF-VEE 355
++CG + T +T +G +YT G +G+LG N+ L S+ F V+
Sbjct: 296 KISYISCGENHTALITDTGLIYTFGDGRHGKLG--LGLENFTNQFVPTLCCSSRRFIVQL 353
Query: 356 IACGSYHVAVLTS 368
+ACG H+ V +
Sbjct: 354 VACGGCHMLVFAT 366
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S P +E + I+CG H AL+ G ++++G+ G+LG G++ ++ P
Sbjct: 281 FETSEPTVIEHIKDQKISYISCGENHTALITDTGLIYTFGDGRHGKLGLGLENFTNQFVP 340
Query: 120 KLIDALSNMNIELVACGEYH 139
L + ++LVACG H
Sbjct: 341 TLCCSSRRFIVQLVACGGCH 360
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 41 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 97 FTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V + G++F +G G LG
Sbjct: 156 -NSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 262
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 263 GQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G + VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV ++G++F
Sbjct: 157 SGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVV------------NTGEVFV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G + +P + + L + + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G V+ G GQL
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 273 QSYPTPVVVEKDRIIEIAACHSAHTSA 299
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G A LVP ++ L VACG ++ LT+ G V+
Sbjct: 92 -TEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + + EV+ WG N
Sbjct: 151 AWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L+S VV+ NIACG +
Sbjct: 147 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQSKVVV---NIACGQMCS 193
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEVF WG G+LG G + P + AL + ++ VACG HT +T G
Sbjct: 194 MAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 254 VYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMW 310
Query: 208 GD 209
G
Sbjct: 311 GQ 312
>gi|397614675|gb|EJK62945.1| hypothetical protein THAOC_16425, partial [Thalassiosira oceanica]
Length = 619
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 168/356 (47%), Gaps = 33/356 (9%)
Query: 59 GVKMDSSLPKALESAV---VLDVQNIACGG----RHAALVNKQGEVFSWGEESGGRLGHG 111
G + D + PK + ++ V VQ A GG H+ L+ G V S+G G LGHG
Sbjct: 157 GKREDEAEPKLMLGSIGWGVRIVQVAAGGGLVRVAHSLLLTSTGRVLSFGTAQYGALGHG 216
Query: 112 VD-----SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN 166
D SDVL PK I+AL + VA GE H+ AVT GD+YTWG+G G LG G+
Sbjct: 217 YDQGKTLSDVLRPKYIEALRGEKVVCVAAGELHSGAVTEDGDVYTWGEGF--CGQLGLGD 274
Query: 167 EVSHWVPKRVN-GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG--------H 217
H +P++V G LE V++IS G HT V T G++F++G G FGVLG +
Sbjct: 275 RRPHLLPEQVTRGGLEDECVANISMGCRHTLVATDDGEVFSWGLGRFGVLGRSYTDFTYN 334
Query: 218 GDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
D V+ + ++G+ AVV+ + + L D
Sbjct: 335 NDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQAAAEDGVPFDALISSL------DAL 388
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQAD 337
L D + +P V AL V+ GH ++ L G +YT GS G LG+
Sbjct: 389 NLTLDDPSTQCIPGRVDALEGIRAVGVSAGHRHSMVLDEHGGLYTFGSGAGGALGHGDLF 448
Query: 338 GK-LPNRVEGKLSKSFVE--EIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ P RV K VE +++ G + ++ VY+WGK A+GR+G G ++
Sbjct: 449 GQEFPVRVS-AFEKDAVEIHQMSAGVDVSMAVDTRGNVYSWGKRADGRIGLGIIEE 503
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 151/388 (38%), Gaps = 62/388 (15%)
Query: 99 SWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-------YHTCAVTLSGDLYT 151
+WG + G+LG+G D PKL+ + +V H+ +T +G + +
Sbjct: 145 AWGVGARGQLGNGKREDEAEPKLMLGSIGWGVRIVQVAAGGGLVRVAHSLLLTSTGRVLS 204
Query: 152 WGDGTYNFGLLGHGNEVSHWV-----PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
+G T +G LGHG + + PK + L G V ++ G H+ VT G ++T
Sbjct: 205 FG--TAQYGALGHGYDQGKTLSDVLRPKYIE-ALRGEKVVCVAAGELHSGAVTEDGDVYT 261
Query: 207 FGDGTFGVLGHGDRKSVSIPREVE--SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS 264
+G+G G LG GDR+ +P +V L+ + G HT +
Sbjct: 262 WGEGFCGQLGLGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLVATD------------ 309
Query: 265 SGKLFTWGDGDKGRLGH-----------------GDKEAKLVPTCVAALVEPNFCRVACG 307
G++F+WG G G LG GD A ++P
Sbjct: 310 DGEVFSWGLGRFGVLGRSYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDAVVQ 369
Query: 308 HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ + + ++ + L +P +P RV+ L ++ G H VL
Sbjct: 370 AAAEDGVPFDALISSL-DALNLTLDDPSTQ-CIPGRVD-ALEGIRAVGVSAGHRHSMVLD 426
Query: 368 SKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV 427
+YT+G GA G LGHGD + P V A + V+ +H+ +GV
Sbjct: 427 EHGGLYTFGSGAGGALGHGDLFGQEFPVRVSAFEKDAVE-------------IHQMSAGV 473
Query: 428 DQSMCSGCRLPFNNFKRKRHNCYNCGLV 455
D SM R ++ ++ G++
Sbjct: 474 DVSMAVDTRGNVYSWGKRADGRIGLGII 501
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 127/322 (39%), Gaps = 65/322 (20%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD--VQNIACGGRHAAL 90
GDV+ WGEG G LG G + LP+ + + D V NI+ G RH +
Sbjct: 257 GDVYTWGEGFC-GQLG---------LGDRRPHLLPEQVTRGGLEDECVANISMGCRHTLV 306
Query: 91 VNKQGEVFSWGEESGGRLGH-----------------GVDSDV---------LHPKLIDA 124
GEVFSWG G LG G D V + P+ +DA
Sbjct: 307 ATDDGEVFSWGLGRFGVLGRSYTDFTYNNDIGMVNPDGDDGQVQGVAAQAPEMQPQEMDA 366
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ E + +L T D + + +P RV+ LEGI
Sbjct: 367 VVQAAAEDGV--PFDALISSLDALNLTLDDPS------------TQCIPGRVD-ALEGIR 411
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+S G H+ V+ G L+TFG G G LGHGD P V + + + A +
Sbjct: 412 AVGVSAGHRHSMVLDEHGGLYTFGSGAGGALGHGDLFGQEFPVRVSAFE-----KDAVEI 466
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF--C 302
+A V+V S + + G +++WG GR+G G E + + +P F
Sbjct: 467 HQMSAGVDV-----SMAVDTRGNVYSWGKRADGRIGLGIIEENVKVPRKVDVGDPLFRAV 521
Query: 303 RVACGHSLTVALTTSGHVYTMG 324
V CG+ +V + G V+ G
Sbjct: 522 DVECGYVHSVIVGLCGSVFQCG 543
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 188 ISCGPWHTAV--------VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG--LRT 237
+SC P HT + +G G G LG+G R+ + P+ + G +R
Sbjct: 119 VSCSPEHTLLRVGGGATSGPGGSGCAAWGVGARGQLGNGKREDEAEPKLMLGSIGWGVRI 178
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK-----LVPTC 292
V+ A G +V V S S+G++ ++G G LGHG + K L P
Sbjct: 179 VQVAAG----GGLVRVA---HSLLLTSTGRVLSFGTAQYGALGHGYDQGKTLSDVLRPKY 231
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRV-EGKLSK 350
+ AL VA G + A+T G VYT G GQLG + LP +V G L
Sbjct: 232 IEALRGEKVVCVAAGELHSGAVTEDGDVYTWGEGFCGQLGLGDRRPHLLPEQVTRGGLED 291
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
V I+ G H V T EV++WG G G LG TD
Sbjct: 292 ECVANISMGCRHTLVATDDGEVFSWGLGRFGVLGRSYTD 330
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 145/290 (50%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ ++ +P+RV G L+ V +I+CG V +G+++ +G G LG
Sbjct: 180 -NSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 239 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 287 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+LS I AC Y H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPH 110
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 111 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 222
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 223 ------SGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 335
Query: 377 K 377
+
Sbjct: 336 Q 336
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ SG VY G GQL
Sbjct: 178 YNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|85001023|ref|XP_955230.1| chromosome condensation (RCC1 homologue) protein [Theileria
annulata strain Ankara]
gi|65303376|emb|CAI75754.1| chromosome condensation (RCC1 homologue) protein, putative
[Theileria annulata]
Length = 759
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 212/517 (41%), Gaps = 103/517 (19%)
Query: 11 VSLSSAVSSSSQGSGHDDGDAL-GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKA 69
+ L + V + S GS H + G ++ WG G GVLG G S +
Sbjct: 166 IGLRNNVVTISCGSNHTLVTTVDGCMYSWGVG-AYGVLGNG-------------SVANRY 211
Query: 70 LESAVVLDVQNI-----ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
+ V+ +I A G RH+ +++QG V+SWG GRLG G P LI+
Sbjct: 212 IPVKVIFPYDDIFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEI 271
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
+ ++CG+ H+ + G +YTW G+ G LG GN +S + V L+GIH
Sbjct: 272 FDTYEVFQISCGDSHSACLDRFGTVYTW--GSCRGGKLGLGNILSDVLEPTVVESLKGIH 329
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDG------TFGVLGHGDRKSVSIPREVESLKGLRTV 238
+ +SCG +T ++S G+++ +G T G++ H +V +P+ V G + +
Sbjct: 330 IIQVSCGTGNTLALSSTGKIYQWGSTLGFNKQTDGLISH----TVYLPQPVVE-TGFKNI 384
Query: 239 RAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV- 297
G + AA+ G L TWG G RLGHGD + ++P V+ L
Sbjct: 385 FVTSGPYSFAAINIF------------GDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRT 432
Query: 298 -------------------------------EPNFCRVACGHSLTVALTTSGHVYTMGSP 326
E ++A G S LT +G VYT G
Sbjct: 433 RMYIDNLLKTYDEAAFKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWG-- 490
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSF---VEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
V G + L N E L F + +IACGS H +T +++WG NG+L
Sbjct: 491 VNNGTGYNSSSEALENYCEPILFNHFSSKITKIACGSSHTLAITINGLLFSWGSNENGQL 550
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNNFK 443
GHGD +R P V +++ C++ + +G+D S C C + N
Sbjct: 551 GHGDLRNRVVPDSVNTIEN----------------CINVF-AGIDNSGCI-CSVSHENMM 592
Query: 444 RKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRV 480
+ Y VF S K L +M P +
Sbjct: 593 KDE---YGTLWVFGSSTCGKLGLGENMTSTVMTPREI 626
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 180/383 (46%), Gaps = 57/383 (14%)
Query: 59 GVKMDSS-LPKALESAVVLDVQNIACGGRHAALV-------NKQGEVFSWGEESGGRLGH 110
GV++++S P+ + V ++CG H+A++ G VF++G + GRLG+
Sbjct: 72 GVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMNAGTVFTFGLGNSGRLGY 131
Query: 111 GVDSD---------------------VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
+D++ V P + N+ ++CG HT T+ G +
Sbjct: 132 HIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGSNHTLVTTVDGCM 191
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
Y+WG G Y G+LG+G+ + ++P +V P + I +S + G H+ + G ++++G
Sbjct: 192 YSWGVGAY--GVLGNGSVANRYIPVKVIFPYDDIFISKCAAGSRHSMALDRQGNVWSWGY 249
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
G G LG G+ +S P +E + +CG H+A + G ++
Sbjct: 250 GGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSHSACLDRF------------GTVY 297
Query: 270 TWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
TWG G+LG G+ + ++ PT V +L + +V+CG T+AL+++G +Y GS
Sbjct: 298 TWGSCRGGKLGLGNILSDVLEPTVVESLKGIHIIQVSCGTGNTLALSSTGKIYQWGS--- 354
Query: 329 GQLG-NPQADGKLPNRVEGKLSKSFVEE------IACGSYHVAVLTSKTEVYTWGKGANG 381
LG N Q DG + + V L + VE + G Y A + ++ TWG G
Sbjct: 355 -TLGFNKQTDGLISHTV--YLPQPVVETGFKNIFVTSGPYSFAAINIFGDLLTWGLGTGY 411
Query: 382 RLGHGDTDDRNSPSLVEALKDKQ 404
RLGHGD+ D P V L+ +
Sbjct: 412 RLGHGDSKDHVIPKFVSYLRTRM 434
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 191/461 (41%), Gaps = 124/461 (26%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDVLHPKLIDAL 125
P +E +V I+CG H+A +++ G V++WG GG+LG G + SDVL P ++++L
Sbjct: 266 PNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTVVESL 325
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGD------------------------------- 154
++I V+CG +T A++ +G +Y WG
Sbjct: 326 KGIHIIQVSCGTGNTLALSSTGKIYQWGSTLGFNKQTDGLISHTVYLPQPVVETGFKNIF 385
Query: 155 ---GTYNF------------GL-----LGHGNEVSHWVPKRVN----------------- 177
G Y+F GL LGHG+ H +PK V+
Sbjct: 386 VTSGPYSFAAINIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDE 445
Query: 178 --------------GPLEGIHVSSISCGPWHTAVVTSAGQLFTFG--DGTFGVLGHGDRK 221
P + + I+ G H A++T G ++T+G +GT G+ +
Sbjct: 446 AAFKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNNGT----GY-NSS 500
Query: 222 SVSIPREVESLK----GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKG 277
S ++ E + + + ACG HT A+ +G LF+WG + G
Sbjct: 501 SEALENYCEPILFNHFSSKITKIACGSSHTLAIT------------INGLLFSWGSNENG 548
Query: 278 RLGHGDKEAKLVPTCVAAL---------VEPNFCRVACGHSLTVALTTSGHVYTMGSPVY 328
+LGHGD ++VP V + ++ + C + H + G ++ GS
Sbjct: 549 QLGHGDLRNRVVPDSVNTIENCINVFAGIDNSGCICSVSHE-NMMKDEYGTLWVFGSSTC 607
Query: 329 GQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGH 385
G+LG N + P + + + V +A G+ H LT +Y G G+ GRLG
Sbjct: 608 GKLGLGENMTSTVMTPREIT---TITGVHSLALGAMHSLALTHDGTLYASGAGSGGRLGT 664
Query: 386 GDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSG 426
GDT N+ V+ D + +IA G++ + AI + + G
Sbjct: 665 GDT--TNAFVFVQVKTDHKFVAIAAGSSHSLAISMENDLYG 703
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 144/356 (40%), Gaps = 51/356 (14%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL--------------- 125
+ G A +N G++ +WG +G RLGHG D + PK + L
Sbjct: 386 VTSGPYSFAAINIFGDLLTWGLGTGYRLGHGDSKDHVIPKFVSYLRTRMYIDNLLKTYDE 445
Query: 126 -----------------SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV 168
I+ +A G+ H +T +G +YTWG G G
Sbjct: 446 AAFKVEDTVENDSINPYDERRIQQIAVGDSHGALLTCNGTVYTWGVNN------GTGYNS 499
Query: 169 SHWVPKRVNGPLEGIHVSS----ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS 224
S + P+ H SS I+CG HT +T G LF++G G LGHGD ++
Sbjct: 500 SSEALENYCEPILFNHFSSKITKIACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRV 559
Query: 225 IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK 284
+P V +++ V A G+ ++ + V N G L+ +G G+LG G+
Sbjct: 560 VPDSVNTIENCINVFA--GIDNSGCICSVSHENMMKD--EYGTLWVFGSSTCGKLGLGEN 615
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
V T +A G ++ALT G +Y G+ G+LG V
Sbjct: 616 MTSTVMTPREITTITGVHSLALGAMHSLALTHDGTLYASGAGSGGRLGTGDTTNAFV-FV 674
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEAL 400
+ K FV IA GS H ++ + ++Y WG+G L D D P+++ +
Sbjct: 675 QVKTDHKFV-AIAAGSSHSLAISMENDLYGWGEGKYLTL---DEDFVLEPTIINTI 726
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 137/311 (44%), Gaps = 50/311 (16%)
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT-------S 200
++ +WG +N LG G EV+ RV G V+ +SCG +H+AV+ +
Sbjct: 57 NVLSWGKVPFN--CLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENMN 114
Query: 201 AGQLFTFGDGTFGVLG-HGDRKS------------------VSIPREVESLKGLR--TVR 239
AG +FTFG G G LG H D S +P+ V GLR V
Sbjct: 115 AGTVFTFGLGNSGRLGYHIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVT 174
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HT G +++WG G G LG+G + +P V +
Sbjct: 175 ISCGSNHTLVTT------------VDGCMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDD 222
Query: 300 NFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIA 357
F + A G ++AL G+V++ G G+LG PN +E V +I+
Sbjct: 223 IFISKCAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIE-IFDTYEVFQIS 281
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDT-DDRNSPSLVEALKDKQVKSIACGTNFTA 416
CG H A L VYTWG G+LG G+ D P++VE+LK + ++CGT T
Sbjct: 282 CGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTVVESLKGIHIIQVSCGTGNTL 341
Query: 417 AIC----LHKW 423
A+ +++W
Sbjct: 342 ALSSTGKIYQW 352
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 30/267 (11%)
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
TS + ++G F LG G + S PR + G R + +CG +H+A +V
Sbjct: 53 TSYLNVLSWGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLV-----C 107
Query: 258 SSSSNCSSGKLFTWGDGDKGRLG-HGDKEAKLV-----------PTCVAALVEP------ 299
SS N ++G +FT+G G+ GRLG H D ++++ P+ + +P
Sbjct: 108 SSRENMNAGTVFTFGLGNSGRLGYHIDTNSEILSQQIGTDDKDEPSWCTPVPQPVGMSIG 167
Query: 300 ---NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEE 355
N ++CG + T+ T G +Y+ G YG LGN A+ +P +V F+ +
Sbjct: 168 LRNNVVTISCGSNHTLVTTVDGCMYSWGVGAYGVLGNGSVANRYIPVKVIFPYDDIFISK 227
Query: 356 IACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
A GS H L + V++WG G NGRLG G+T +P+L+E +V I+CG + +
Sbjct: 228 CAAGSRHSMALDRQGNVWSWGYGGNGRLGLGNTRSYFTPNLIEIFDTYEVFQISCGDSHS 287
Query: 416 AAICLHKWVSGVDQSMCSGCRLPFNNF 442
A CL ++ + C G +L N
Sbjct: 288 A--CLDRFGTVYTWGSCRGGKLGLGNI 312
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 34/230 (14%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ IACG H + G +FSWG G+LGHG + + P ++ + N I + A +
Sbjct: 520 ITKIACGSSHTLAITINGLLFSWGSNENGQLGHGDLRNRVVPDSVNTIENC-INVFAGID 578
Query: 138 YHTCAVTLS---------GDLYTWGDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVS 186
C ++S G L+ +G T G LG G ++ V P+ + + G+H
Sbjct: 579 NSGCICSVSHENMMKDEYGTLWVFGSST--CGKLGLGENMTSTVMTPREIT-TITGVH-- 633
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
S++ G H+ +T G L+ G G+ G LG GD + + +V++ + V A G H
Sbjct: 634 SLALGAMHSLALTHDGTLYASGAGSGGRLGTGDTTNAFVFVQVKTDH--KFVAIAAGSSH 691
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 296
+ A+ L+ WG+G L D++ L PT + +
Sbjct: 692 SLAI------------SMENDLYGWGEGKYLTL---DEDFVLEPTIINTI 726
>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
Length = 527
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 146/291 (50%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 41 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LTGKKIACLSYGSGPHIVLATTEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 97 FTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V + G++F +G G LG
Sbjct: 156 -NSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 262
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 263 GQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G + VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV ++G++F
Sbjct: 157 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVV------------NTGEVFV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVQSTIEPRRLDS-LTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G + +P + + L + + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G V+ G GQL
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 273 QSYPTPVVVEKDRIIEIAACHSAHTSA 299
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKI---ACLSYGSGPHIVLAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G A LVP ++ L VACG ++ LT+ G V+
Sbjct: 92 -TEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + + EV+ WG N
Sbjct: 151 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 147 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKVVV---NIACGQMCS 193
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEVF WG G+LG G + P + AL + ++ VACG HT +T G
Sbjct: 194 MAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 254 VYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMW 310
Query: 208 GD 209
G
Sbjct: 311 GQ 312
>gi|340503755|gb|EGR30283.1| hypothetical protein IMG5_135970 [Ichthyophthirius multifiliis]
Length = 361
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 159/351 (45%), Gaps = 49/351 (13%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIEL--V 133
+ + I+CG + + VFSWG+ S G LG G P+L+ L N NI++ +
Sbjct: 23 IGIIQISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDNIKIQHI 82
Query: 134 ACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW 193
+CG+YH+ A + +G ++TWG G NFG LG GN + P V G LEG ++ + CG +
Sbjct: 83 SCGQYHSAATSKTGQVFTWGLG--NFGQLGKGNLANFNQPDLVRGDLEGKNILATVCGGY 140
Query: 194 HTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP----------REVESLKGLRTVRAACG 243
H T+ G +T+ G V + KS +IP +E + + A G
Sbjct: 141 HNVCFTNEG--YTYSWGCLEV-DQQNIKSSNIPYPMMLNSEFIKEENNPFNMIITYIAAG 197
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFC 302
+ A+ + + ++ WG +G+LG G + P+ V L
Sbjct: 198 ADYCMAIEQKRI------------IYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNLMK 245
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYH 362
+ACG ++ LT SG ++ GS G+LG + L E + K+ V +IACGS H
Sbjct: 246 SIACGEEHSLFLTESGRIFACGSSKDGKLGLGIRNTILMTPQEINI-KAKVVKIACGSTH 304
Query: 363 VAVLTSKTEV------------------YTWGKGANGRLGHGDTDDRNSPS 395
L EV YTWG G +LGHGD D+ ++P
Sbjct: 305 SMALAINKEVEQNQDEYEYLEAKETKVIYTWGNGWESKLGHGDKDNLDTPQ 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 177 NGPLE-GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL--K 233
N LE I + ISCG +T +F++GD ++G LG G +S +P+ V L
Sbjct: 16 NNELEQNIGIIQISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDND 75
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
++ +CG +H+AA +G++FTWG G+ G+LG G+ P V
Sbjct: 76 NIKIQHISCGQYHSAAT------------SKTGQVFTWGLGNFGQLGKGNLANFNQPDLV 123
Query: 294 AALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKS- 351
+E N CG V T G+ Y+ G Q ++ P + + K
Sbjct: 124 RGDLEGKNILATVCGGYHNVCFTNEGYTYSWGCLEVDQQNIKSSNIPYPMMLNSEFIKEE 183
Query: 352 ------FVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD-RNSPSLVEALKDKQ 404
+ IA G+ + + K +Y WG+ G+LG G + + PS V+ L
Sbjct: 184 NNPFNMIITYIAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNL 243
Query: 405 VKSIACG 411
+KSIACG
Sbjct: 244 MKSIACG 250
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 20/186 (10%)
Query: 303 RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSF-VEEIACGS 360
+++CG + +ALT V++ G YG LG + LP V + + ++ I+CG
Sbjct: 27 QISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDNIKIQHISCGQ 86
Query: 361 YHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEA-LKDKQVKSIACG----TNFT 415
YH A + +V+TWG G G+LG G+ + N P LV L+ K + + CG FT
Sbjct: 87 YHSAATSKTGQVFTWGLGNFGQLGKGNLANFNQPDLVRGDLEGKNILATVCGGYHNVCFT 146
Query: 416 AAICLHKW-VSGVDQSMCSGCRLPF-----NNFKRKRHNCYN-------CGLVFCHSCSS 462
+ W VDQ +P+ + F ++ +N +N G +C +
Sbjct: 147 NEGYTYSWGCLEVDQQNIKSSNIPYPMMLNSEFIKEENNPFNMIITYIAAGADYCMAIEQ 206
Query: 463 KKSLKA 468
K+ + A
Sbjct: 207 KRIIYA 212
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 84/193 (43%), Gaps = 29/193 (15%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDV 116
+ + ++S K + + + IA G + + ++ +++WG G+LG G+ + V
Sbjct: 171 YPMMLNSEFIKEENNPFNMIITYIAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFV 230
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG---DGTYNFGLLGHGNEVSHWVP 173
P + L ++ +ACGE H+ +T SG ++ G DG G+ P
Sbjct: 231 DQPSKVQGLDGNLMKSIACGEEHSLFLTESGRIFACGSSKDGKLGLGI----RNTILMTP 286
Query: 174 KRVNGPLEGIHVSSISCGPWHTAVVTSAGQ------------------LFTFGDGTFGVL 215
+ +N + V I+CG H+ + + ++T+G+G L
Sbjct: 287 QEINIKAK---VVKIACGSTHSMALAINKEVEQNQDEYEYLEAKETKVIYTWGNGWESKL 343
Query: 216 GHGDRKSVSIPRE 228
GHGD+ ++ P++
Sbjct: 344 GHGDKDNLDTPQK 356
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDIQSTIEPRKLDS---LSGKKIACLSYGSGPHVVLATTEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ + +I+CG + V G++F +G G LG
Sbjct: 180 -NSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 239 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 287 GQLGTGNKSNQSYPTPV--VVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 139/302 (46%), Gaps = 27/302 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+LS I AC Y H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKI---ACLSYGSGPH 110
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 111 VVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 168
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG + AVV+
Sbjct: 169 SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVD------ 222
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+G++F WG G+LG G + P +AAL RVACG++ T+ LT G
Sbjct: 223 ------TGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEG 276
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTW 375
VY G+ YGQLG +++ P V + K V EI AC S H A T VY W
Sbjct: 277 QVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDRVIEIAACHSAHTSAAKTQGGHVYMW 334
Query: 376 GK 377
G+
Sbjct: 335 GQ 336
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P++++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDIQSTIEPRKLDS-LSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G V+ G GQL
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVVVEKDRVIEIAACHSAHTSA 323
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR+++SL G + AC + + V +
Sbjct: 66 EIFVLGTNCCGCLGLGDIQSTIEPRKLDSLSGKKI---ACLSYGSGPHVVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L + IACG + EV+ WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 272
>gi|355694474|gb|AER99681.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 306
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLYTWG 153
E+++WG GRLGHG ++ L PK++ L + VACG + T A+T G +++WG
Sbjct: 1 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 60
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
DG +FG LG G +P+ + L G V I CG + +T +G ++T+G G +
Sbjct: 61 DG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF 117
Query: 214 VLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LGHG V P+ VE L+G + V A G H AV + +G+++ WGD
Sbjct: 118 RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------AGQVYAWGD 165
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTT 316
D G+ G+G PT V L RVACG S +VA TT
Sbjct: 166 NDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 208
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 12/216 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
+L+T+G G +G LGHGD + P+ V+ L G R ++ ACG + +
Sbjct: 1 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTL----------AL 50
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
G +F+WGDGD G+LG G E +P + L C++ CG ++ALT SG V+T
Sbjct: 51 TDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 110
Query: 323 MGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G Y +LG+ + P VEG K V +A G+ H +T +VY WG +G
Sbjct: 111 WGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV-HVAVGALHCLAVTDAGQVYAWGDNDHG 169
Query: 382 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ G+G T P+LV+ L+ +++ +ACG++ + A
Sbjct: 170 QQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 205
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACG--HSLTVALTTSGHVYTMG 324
+L+TWG G+ GRLGHGD +L P V L+ +VACG + T+ALT G V++ G
Sbjct: 1 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 60
Query: 325 SPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+G+LG ++G +P +E +L+ V +I CG+ LT V+TWGKG RL
Sbjct: 61 DGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRL 119
Query: 384 GHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
GHG P +VE L+ K++ +A G A+
Sbjct: 120 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 154
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 67 PKALESAVVLDVQNIACGGRHAALV--NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA 124
PK ++ + V +ACG R A + +G VFSWG+ G+LG G P+ I+
Sbjct: 24 PKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER 83
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L+ + + CG + A+T SG ++TWG G Y LGHG++V P+ V G L G
Sbjct: 84 LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR--LGHGSDVHVRKPQVVEG-LRGKK 140
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ ++ G H VT AGQ++ +GD G G+G P V+ L+G + R ACG
Sbjct: 141 IVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGS 200
Query: 245 WHTAAVVEVMVGNSS 259
H+ A V V S
Sbjct: 201 SHSVAWTTVDVATPS 215
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG+G G L R GS ++P+ +E V I CG + + +
Sbjct: 54 GLVFSWGDGDF-----GKLGRGGS-----EGCNIPQNIERLNGQGVCQIECGAQFSLALT 103
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
K G V++WG+ RLGHG D V P++++ L I VA G H AVT +G +Y W
Sbjct: 104 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 163
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
GD + G G+G + P V G LEG ++ ++CG H+ T+
Sbjct: 164 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 208
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 371 EVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL------HKWV 424
E+YTWG G GRLGHGD + P +V+ L +V +ACG+ + L W
Sbjct: 1 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWG 60
Query: 425 SG----VDQSMCSGCRLPFN 440
G + + GC +P N
Sbjct: 61 DGDFGKLGRGGSEGCNIPQN 80
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 15/214 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G P++++ LS + + ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAG 199
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
E H+ A+++SG++Y+WG FG LG + S P + L+ V ++CG HTA
Sbjct: 200 EAHSMALSMSGNIYSWGKN--EFGQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTA 256
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T G LFTFG G G LGH ++ P V L G R + ACG WHT A V +
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDL-- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
GK+F++G G +G+LG+G +L+P
Sbjct: 315 ---------GKVFSFGSGKEGQLGNGGTRDQLIP 339
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + S + H + L
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYDNYS-----------MKHLRFESILQ 136
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I + CG+YH+ A++ G+L+ WG + G LG G + ++ L GI ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLSGIPLA 194
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G FG LG +S P +E+L + ACG H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + G LFT+G G G+LGH + +L P VA L ++AC
Sbjct: 255 TALLTQ------------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302
Query: 307 GHSLTVALTTS-GHVYTMGSPVYGQLGN 333
G T+A + G V++ GS GQLGN
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGN 330
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 28/278 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I NM I + G H ++ G + + + Y+ L R
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYDN--YSMKHL------------RFES 133
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRT 237
L+ + I+CG +H+ ++ G+LF +G G LG G + S + P+ VE L G+
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPL 193
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ + G H+ A+ SG +++WG + G+LG E+K P+ + AL
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALD 241
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ACG S T LT G ++T G+ +GQLG+ +L + +L+ + V +IA
Sbjct: 242 NQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIA 301
Query: 358 CGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
CG +H +A ++ +V+++G G G+LG+G T D+ P
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG VG F ++ P+ +E + + I+ G H+ ++
Sbjct: 157 GELFAWGQNL-HGQLG-----VGRKFP---STTTPQIVEHLSGIPLAQISAGEAHSMALS 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG+ G+LG P LI+AL N +E +ACG HT +T G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G + G LGH + + P V L G V+ I+CG WHT A V+ G++F+FG G
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLV-AELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 212 FGVLGHGDRKSVSIP 226
G LG+G + IP
Sbjct: 325 EGQLGNGGTRDQLIP 339
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ + + S+ G H +++S G+ F + D S+ R L+ + ++
Sbjct: 95 KNMKIHSMDLGADHMLILSSGGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEP 299
CG +H+ A+ G+LF WG G+LG G K + P V L
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGI 191
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIAC 358
+++ G + ++AL+ SG++Y+ G +GQLG + K P+ +E L VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLAC 250
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H A+LT ++T+G G +G+LGH T + P LV L +V IACG T A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPN----RVEGKLS 349
+ L E ++ CG ++AL+ G ++ G ++GQLG K P+ ++ LS
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLS 189
Query: 350 KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
+ +I+ G H L+ +Y+WGK G+LG T+ ++SPSL+EAL +++V+ +A
Sbjct: 190 GIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLA 249
Query: 410 CGTNFTAAI 418
CG + TA +
Sbjct: 250 CGGSHTALL 258
>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
Length = 988
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 176/356 (49%), Gaps = 50/356 (14%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG---VDSDVLHPKLIDALSNMNIELVA 134
V++IA G RH ++ G+V+S G G LG G S ++P I S ++I ++
Sbjct: 49 VKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHIS--STVSIIQIS 106
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G H+ AV+ G L+ WG ++ L G+ ++ PKRV E + V+ CG H
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHG-QLAMSGDILASDTPKRVPSLPETVQVA---CGASH 162
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
T + G++F +G + G + H P EVE + V+ + G T A+
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRHS-------PAEVEIFISIPIVQISAGNLFTMALT--- 212
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF---CRVACGHSLT 311
+SG LF WG ++G+LG + + P V PN V CG S +
Sbjct: 213 ---------ASGTLFAWGKNEEGQLGDFTNKDVVNPCAV-----PNINSVVAVECGDSHS 258
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEG------KLSKSFVEEIACGSYHVAV 365
+ALT G V++ GS +GQLG Q PNR + ++ S V IACG H +
Sbjct: 259 IALTHEGRVFSCGSDSFGQLGCGQ-----PNRSQNCMRGITEMLGSHVTRIACGRCH-TI 312
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLH 421
+ + +++T+G +NG+LGHG+T ++ +P +++++++ V S+ G + + + +H
Sbjct: 313 VVANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSVEN--VASVFAGWDQSFCLQIH 366
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 138/333 (41%), Gaps = 45/333 (13%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGD---VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSS 65
+ V +SS VS +G A+ D +F WG + G L G
Sbjct: 92 YPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWGSNSH-----GQLAMSGDILASDTPKR 146
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+P E+ +ACG H +N G VF WG++S GR+ H P ++
Sbjct: 147 VPSLPETV------QVACGASHTVSLNGGGRVFIWGQQSDGRIRHS-------PAEVEIF 193
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIH 184
++ I ++ G T A+T SG L+ WG G + + V+ +N
Sbjct: 194 ISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINS------ 247
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACG 243
V ++ CG H+ +T G++F+ G +FG LG G +S + R + + G R ACG
Sbjct: 248 VVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACG 307
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
HT V ++GK+ T+G G+LGHG+ ++ P + ++ N
Sbjct: 308 RCHTIVV-------------ANGKMHTFGLNSNGQLGHGNTRNQITPRVIDSV--ENVAS 352
Query: 304 VACGHSLTVALTT-SGHVYTMGSPVYGQLGNPQ 335
V G + L + H Y + S L P+
Sbjct: 353 VFAGWDQSFCLQIHTKHAYDVLSGPSSYLQKPK 385
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 34/255 (13%)
Query: 172 VPKRVNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPRE 228
VP+ V G G+ V SI+ G HT ++ G++++ G G LG G +
Sbjct: 33 VPRLVYGAPTRQNGVIVKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVR------- 85
Query: 229 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCS-SGKLFTWGDGDKGRLGH-GDKEA 286
+G T+ + T +++++ G S S S G+LF WG G+L GD A
Sbjct: 86 ----EGSYTIYPV-HISSTVSIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILA 140
Query: 287 KLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---PNR 343
P V +L P +VACG S TV+L G V+ ++GQ Q+DG++ P
Sbjct: 141 SDTPKRVPSL--PETVQVACGASHTVSLNGGGRVF-----IWGQ----QSDGRIRHSPAE 189
Query: 344 VEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK 403
VE +S V +I+ G+ LT+ ++ WGK G+LG D +P V +
Sbjct: 190 VEIFISIPIV-QISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINS- 247
Query: 404 QVKSIACGTNFTAAI 418
V ++ CG + + A+
Sbjct: 248 -VVAVECGDSHSIAL 261
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 146/343 (42%), Gaps = 63/343 (18%)
Query: 17 VSSSSQGSGH-----DDGDALGDVFIWGEGTG-DGVLGGGLNRVGSCFGVKMDSSLPKAL 70
V S + G H DDG +W G+ +G LG G R GS + P +
Sbjct: 49 VKSIASGERHTLFLSDDGK------VWSCGSNYNGELGRGGVREGSY------TIYPVHI 96
Query: 71 ESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH---PKLIDALSN 127
S V + I+ G H+ V+ G +F+WG S G+L + D+L PK + +L
Sbjct: 97 SSTV--SIIQISAGRSHSMAVSDDGRLFAWGSNSHGQL--AMSGDILASDTPKRVPSLP- 151
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
VACG HT ++ G ++ WG + G + H P V + I +
Sbjct: 152 -ETVQVACGASHTVSLNGGGRVFIWGQQSD--GRIRHS-------PAEVEIFI-SIPIVQ 200
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
IS G T +T++G LF +G G LG K V P C V +
Sbjct: 201 ISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNP---------------CAVPNI 245
Query: 248 AAVVEVMVGNSSSSNCS-SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE---PNFCR 303
+VV V G+S S + G++F+ G G+LG G C+ + E + R
Sbjct: 246 NSVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRS--QNCMRGITEMLGSHVTR 303
Query: 304 VACG--HSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRV 344
+ACG H++ VA +G ++T G GQLG+ ++ RV
Sbjct: 304 IACGRCHTIVVA---NGKMHTFGLNSNGQLGHGNTRNQITPRV 343
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 139/278 (50%), Gaps = 29/278 (10%)
Query: 57 CFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGH 110
C G+ + S+L P+ L+S L + IAC G H L +GEVF+WG +LG+
Sbjct: 53 CLGLGDVQSTLEPRRLDS---LSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGN 109
Query: 111 GVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
G + L P + LSN + VACG YH+ +T G++Y WG N G +G G+ +
Sbjct: 110 GTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYN--NSGQVGSGSTAN 167
Query: 170 HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
+P+RV G L+ V +I+CG + V G+++ +G G LG G + P V
Sbjct: 168 QAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV 227
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
+L+G+R R ACG HT + + G+++ WG G+LG G+K +
Sbjct: 228 AALQGIRVQRVACGFAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSY 275
Query: 290 PTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
PT V +VE + +A HS + A T GHVY G
Sbjct: 276 PTPV--VVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G L P+ +D+LS+ I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI---ACLSYGSGPHIILATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y LG+G VP +V+ L V ++CG +H+ V+TS G+++ +G
Sbjct: 99 WGHNGYT--QLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + +IPR V L+ V ACG + AVV+ +G+++
Sbjct: 157 SGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVD------------TGEVYV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL RVACG + T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPTPVVVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 26/271 (9%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC-----GPWHTAVVTSAGQLFTFGD 209
GT G LG G+ S P+R L+ + I+C GP H + T+ G++FT+G
Sbjct: 47 GTNCSGCLGLGDVQSTLEPRR----LDSLSDKKIACLSYGSGP-HIILATTEGEVFTWGH 101
Query: 210 GTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
+ LG+G +P +V + L + + ACG +H+ + S G++
Sbjct: 102 NGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLT------------SDGEV 149
Query: 269 FTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPV 327
+ WG + G++G G + +P V ++ +ACG +VA+ +G VY G
Sbjct: 150 YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNG 209
Query: 328 YGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
GQLG + P RV L V+ +ACG H VLT + +VY WG + G+LG G
Sbjct: 210 NGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTG 268
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
+ +++ P+ V KD+ ++ AC + T+A
Sbjct: 269 NKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 299
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL + AC + + + +
Sbjct: 42 EIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI---ACLSYGSGPHIILAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP V+ L VACG ++ LT+ G VY
Sbjct: 92 -TEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVY 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + EVY WG N
Sbjct: 151 AWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVL 248
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 15/217 (6%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G P++++ L+ + + ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAG 199
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
E H+ A+++SG++Y+WG FG LG G+ S P + L+ V ++CG H+A
Sbjct: 200 EAHSMALSMSGNIYSWGKN--EFGQLGLGHTESKDYPSLIEA-LDNQEVEFLACGGSHSA 256
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T G LFTFG G G LGH ++ P V L G R + ACG WHT A V +
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDL-- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
GK+F++G G G+LG+G +L+P V
Sbjct: 315 ---------GKVFSFGSGKDGQLGNGGTRDQLIPLPV 342
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 126/268 (47%), Gaps = 26/268 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + S + H + L
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I + CG+YH+ A++ G+L+ WG + G LG G + ++ L G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGVPLA 194
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G FG LG G +S P +E+L ACG H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSH 254
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+A + + G LFT+G G G+LGH + +L P VA LV ++AC
Sbjct: 255 SALLTQ------------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIAC 302
Query: 307 GHSLTVALTTS-GHVYTMGSPVYGQLGN 333
G T+A + G V++ GS GQLGN
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKDGQLGN 330
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I NM I V G H ++ G + + + Y+ L R
Sbjct: 88 PKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDN--YSMKHL------------RFES 133
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRT 237
L+ + I+CG +H+ ++ G+LF +G G LG G + S + P+ VE L G+
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPL 193
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ + G H+ A+ SG +++WG + G+LG G E+K P+ + AL
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALD 241
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ACG S + LT G ++T G+ +GQLG+ +L + +L + V +IA
Sbjct: 242 NQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIA 301
Query: 358 CGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK 406
CG +H +A ++ +V+++G G +G+LG+G T D+ P V+ +++K
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELK 351
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 13/199 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG VG F ++ P+ +E + + I+ G H+ ++
Sbjct: 157 GELFAWGQNL-HGQLG-----VGRKFP---STTTPQIVEHLAGVPLAQISAGEAHSMALS 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG+ G+LG G +P LI+AL N +E +ACG H+ +T G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTF 267
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G + G LGH + + P V L G V+ I+CG WHT A V+ G++F+FG G
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLV-AELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 212 FGVLGHGDRKSVSIPREVE 230
G LG+G + IP V+
Sbjct: 325 DGQLGNGGTRDQLIPLPVK 343
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ + + S+ G H +++S G+ F + D S+ R L+ + ++
Sbjct: 95 KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEP 299
CG +H+ A+ G+LF WG G+LG G K + P V L
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIAC 358
+++ G + ++AL+ SG++Y+ G +GQLG + K P+ +E L VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEA-LDNQEVEFLAC 250
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H A+LT ++T+G G +G+LGH T + P LV L +V IACG T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 309
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF- 352
+ L E ++ CG ++AL+ G ++ G ++GQLG K P+ ++ +
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTTPQIVEHLA 189
Query: 353 ---VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
+ +I+ G H L+ +Y+WGK G+LG G T+ ++ PSL+EAL +++V+ +A
Sbjct: 190 GVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLA 249
Query: 410 CGTNFTAAI 418
CG + +A +
Sbjct: 250 CGGSHSALL 258
>gi|384251643|gb|EIE25120.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 567
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 166/379 (43%), Gaps = 57/379 (15%)
Query: 46 VLGGGLNRVGSCFGVKMDSSL-PKALESAVVLDVQN-------IACGGRHAALVNKQGEV 97
V G G+N G + ++ + PK LE+ + Q + CG R ++ G+V
Sbjct: 51 VFGWGVNEDGQLALDEAENVMAPKVLEALLGTRFQGRDFLKSPLVCGSRCTVAIDADGQV 110
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTY 157
SWG LGH P+ + AL M I V+ G +H A+ +G +Y WG Y
Sbjct: 111 LSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTGGWHCLALDSAGLVYAWGGNEY 170
Query: 158 NFGLLGHGNEVSHWVPKRVNGP---LEGIHVSSISCGPWHTAVVTSAGQLFTFGD--GTF 212
G W + V P + G+ V ++ G H+ V+T G+++T+G+ G F
Sbjct: 171 -------GQCNVEWNVRDVVQPTPCVPGLRVKQVAAGGMHSCVLTDTGEVWTWGEPWGDF 223
Query: 213 GVLGHGDRKSVSIPREVESLKG-LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
S+ + R + ++G + V+ ACG +H A+ ++G++ W
Sbjct: 224 ---------SMKVDRHPKKVEGAIDIVKLACGAFHNLAL------------NAAGEVLAW 262
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG------------- 318
G D G+LG+G + PT V L + + G ++ALTT G
Sbjct: 263 GINDFGQLGNGSTFYETSPTKVLGLEDVRVADIVAGGWHSLALTTEGGAHPQIECAKAGK 322
Query: 319 HVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
V+ G YG+LG G R G K + +CG H VLTS+ +YTWG+G
Sbjct: 323 MVFVWGRGEYGRLGLGDRSGSSKLRATGVAFKE--PDASCGGTHTMVLTSEGRIYTWGRG 380
Query: 379 ANGRLGHGDTDDRNSPSLV 397
+ GRLG G D SP V
Sbjct: 381 SFGRLGTGTEKDYLSPVEV 399
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 121/257 (47%), Gaps = 41/257 (15%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVAC 135
L V+ +A GG H+ ++ GEV++WGE G VD HPK ++ ++I +AC
Sbjct: 192 LRVKQVAAGGMHSCVLTDTGEVWTWGE-PWGDFSMKVDR---HPKKVEGA--IDIVKLAC 245
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G +H A+ +G++ WG +FG LG+G+ P +V G LE + V+ I G WH+
Sbjct: 246 GAFHNLALNAAGEVLAWG--INDFGQLGNGSTFYETSPTKVLG-LEDVRVADIVAGGWHS 302
Query: 196 AVVTSAG-------------QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
+T+ G +F +G G +G LG GDR S R + A+C
Sbjct: 303 LALTTEGGAHPQIECAKAGKMVFVWGRGEYGRLGLGDRSGSSKLRATGV--AFKEPDASC 360
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC 302
G HT + S G+++TWG G GRLG G ++ L P V P
Sbjct: 361 GGTHTMVLT------------SEGRIYTWGRGSFGRLGTGTEKDYLSPVEVFLPGGPERW 408
Query: 303 RVAC-----GHSLTVAL 314
RV C HSL +AL
Sbjct: 409 RVICCASGGRHSLVLAL 425
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVW 245
S + CG T + + GQ+ ++G LGH R+ PR V +L+G+ + + G W
Sbjct: 92 SPLVCGSRCTVAIDADGQVLSWGWNDRATLGHSHREHERKPRRVAALRGMEITQVSTGGW 151
Query: 246 HTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFC--- 302
H A+ S+G ++ WG + G+ V V +V+P C
Sbjct: 152 HCLALD------------SAGLVYAWGGNEYGQCN--------VEWNVRDVVQPTPCVPG 191
Query: 303 ----RVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
+VA G + LT +G V+T G P +G + + D + P +VEG + + ++AC
Sbjct: 192 LRVKQVAAGGMHSCVLTDTGEVWTWGEP-WGDF-SMKVD-RHPKKVEGAID---IVKLAC 245
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G++H L + EV WG G+LG+G T SP+ V L+D +V I G + A+
Sbjct: 246 GAFHNLALNAAGEVLAWGINDFGQLGNGSTFYETSPTKVLGLEDVRVADIVAGGWHSLAL 305
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 99/223 (44%), Gaps = 34/223 (15%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WGE GD F +K+D PK +E A+ D+ +ACG H +N
Sbjct: 211 GEVWTWGEPWGD-------------FSMKVDRH-PKKVEGAI--DIVKLACGAFHNLALN 254
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD---- 148
GEV +WG G+LG+G P + L ++ + + G +H+ A+T G
Sbjct: 255 AAGEVLAWGINDFGQLGNGSTFYETSPTKVLGLEDVRVADIVAGGWHSLALTTEGGAHPQ 314
Query: 149 ---------LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
++ WG G Y G LG G+ ++ SCG HT V+T
Sbjct: 315 IECAKAGKMVFVWGRGEY--GRLGLGDRSGS---SKLRATGVAFKEPDASCGGTHTMVLT 369
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAAC 242
S G+++T+G G+FG LG G K P EV G R C
Sbjct: 370 SEGRIYTWGRGSFGRLGTGTEKDYLSPVEVFLPGGPERWRVIC 412
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 141/278 (50%), Gaps = 29/278 (10%)
Query: 57 CFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGH 110
C G+ + S++ P+ LES L+ + IAC G H L +GEVF+WG + +LG+
Sbjct: 6 CLGLGDVQSTIEPRRLES---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGN 62
Query: 111 GVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
G + L P I LSN + VACG YH+ +T G+++ WG N G +G G+ +
Sbjct: 63 GTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTAN 120
Query: 170 HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
+P+RV G L+ V +I+CG + V + G+++ +G G LG G + P +
Sbjct: 121 QLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRI 180
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
+L+G+R R ACG HT + + G+++ WG G+LG G+K +
Sbjct: 181 AALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSY 228
Query: 290 PTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
P V +VE + +A HS + A T GHVY G
Sbjct: 229 PAPV--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 29/281 (10%)
Query: 106 GRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYTWGDGTYNFGL 161
G LG G + P+ +++L N + +AC Y H T G+++TWG Y+
Sbjct: 5 GCLGLGDVQSTIEPRRLESL---NGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS--Q 59
Query: 162 LGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK 221
LG+G VP ++ L V+ ++CG +H+ V+TS G++F +G G +G G
Sbjct: 60 LGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119
Query: 222 SVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 280
+ IPR V L+ V ACG + AVV ++G+++ WG G+LG
Sbjct: 120 NQLIPRRVTGCLQNKVVVNIACGQMCSMAVV------------NTGEVYVWGYNGNGQLG 167
Query: 281 HGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK- 339
G + P +AAL RVACG++ T+ LT G VY G+ YGQLG +
Sbjct: 168 LGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQS 227
Query: 340 --LPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
P VE +E AC S H A T VY WG+
Sbjct: 228 YPAPVVVE---KDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 265
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 26/266 (9%)
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISC-----GPWHTAVVTSAGQLFTFGDGTFGV 214
G LG G+ S P+R LE ++ I+C GP H + T+ G++FT+G +
Sbjct: 5 GCLGLGDVQSTIEPRR----LESLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAYSQ 59
Query: 215 LGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
LG+G +P + + L + ACG +H+ + S G++F WG
Sbjct: 60 LGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLT------------SDGEVFAWGY 107
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+ G++G G +L+P V ++ +ACG ++A+ +G VY G GQLG
Sbjct: 108 NNSGQVGSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 167
Query: 333 -NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ ++
Sbjct: 168 LGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 226
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+ V KD+ ++ AC + T+A
Sbjct: 227 SYPAPVVVEKDRIIEIAACHSAHTSA 252
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LG GD +S PR +ESL G + AC + + + + + G++FTWG
Sbjct: 5 GCLGLGDVQSTIEPRRLESLNGKKI---ACLSYGSGPHIVLAT--------TEGEVFTWG 53
Query: 273 DGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+LG+G LVP ++ L VACG ++ LT+ G V+ G GQ+
Sbjct: 54 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQV 113
Query: 332 GN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G+ A+ +P RV G L V IACG + + EVY WG NG+LG G + +
Sbjct: 114 GSGSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGN 173
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
+ +P + AL+ +V+ +ACG T +
Sbjct: 174 QPTPCRIAALQGIRVQRVACGYAHTLVL 201
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 100 GEVFAWGYNNS--------GQVGS--GSTANQLIPRRVTGCLQNKVVV---NIACGQMCS 146
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P I AL + ++ VACG HT +T G
Sbjct: 147 MAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQ 206
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 207 VYAWGANSY--GQLGTGNKSNQSYPAPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMW 263
Query: 208 GD 209
G
Sbjct: 264 GQ 265
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 153/369 (41%), Gaps = 25/369 (6%)
Query: 30 DALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
DA V WG+ DG LG G DSS P A++ + IA G H+
Sbjct: 69 DASDTVLAWGDNK-DGELG---------DGTTTDSSTPIAVDLPAGTTITAIAAGHDHSL 118
Query: 90 LVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDL 149
V G +WG G+LG G +D P +D + + +A G+ H+ AVT +G
Sbjct: 119 AVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTA 178
Query: 150 YTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGD 209
WGD + G LG G P V+ P G V++I+ G H+ +TSAG + T+G
Sbjct: 179 LAWGD--NDRGELGDGTTTRRDTPVDVDLP-AGTTVTAIAAGIGHSLALTSAGTVLTWGL 235
Query: 210 GTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLF 269
+ G LG G S P V+ G A G H+ AV ++G +
Sbjct: 236 NSDGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAV------------TTAGTIL 283
Query: 270 TWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYG 329
WG+ G+LG G P V + G ++A+T++G G G
Sbjct: 284 AWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDG 343
Query: 330 QLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
QLG+ + + V GS H +T+ + WG ++GRLG G T
Sbjct: 344 QLGDGTTTNSSTPIAVNLPADTTVTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTT 403
Query: 390 DRNSPSLVE 398
+ ++P V
Sbjct: 404 NSSTPIAVN 412
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 97/219 (44%), Gaps = 13/219 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V WG + DG LG G DSS P A++ V IA G H+ V
Sbjct: 228 GTVLTWGLNS-DGQLG---------DGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVT 277
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G + +WG S G+LG G ++ P ++ ++ I + G H+ AVT +G W
Sbjct: 278 TAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAW 337
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
GD + G LG G + P VN P + V++ + G H+ VT+AG + +G+ +
Sbjct: 338 GD--NDDGQLGDGTTTNSSTPIAVNLPAD-TTVTATTAGSLHSLAVTTAGTILAWGNNSD 394
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV 251
G LG G + S P V G H+ A+V
Sbjct: 395 GRLGDGTTTNSSTPIAVNLPADTTVTATTAGSAHSMALV 433
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 160/340 (47%), Gaps = 25/340 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
+ ++CG H A V +++ G + G+LG G + V P + AL ++ ACG
Sbjct: 123 LAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGR 182
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
HT T G++Y G + G LG G+ +++ + +S G +A
Sbjct: 183 NHTLVCTEGGNVYAAGGNSD--GQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAA 240
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T G+L+ +GD + G +G +V +P V + G +CG +H+A V
Sbjct: 241 LTEDGELYMWGDNSEGQIGLASESNVCVPCRV--VIGKPVSWVSCGYYHSALVT------ 292
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAK--LVPTCVAALVEPNFCRVACGHSLTVALT 315
+ G+L+T+G+ + G+LG ++ K +P V + +VACG TVALT
Sbjct: 293 ------TDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPG-ISGKVNQVACGGGHTVALT 345
Query: 316 TSGHVYTMGSPVYGQLGNPQA--DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
VYT G +GQLG + +P VE L K + +ACG H A+++ +Y
Sbjct: 346 EED-VYTFGLGEFGQLGLGTCIFETSVPKVVE-HLRKQKIHYVACGENHTALISDTGLMY 403
Query: 374 TWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
T+G G +G+LG G+ + N P+L V +ACG
Sbjct: 404 TFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACG 443
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 23/298 (7%)
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
L N + ++CG+ HT VT + LY G + N+G LG G++ + P V L+
Sbjct: 118 LRNDTLAQLSCGDEHTAFVTGNSKLYMLG--SNNWGQLGLGSKTTVNKPTCVKA-LKPEK 174
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +CG HT V T G ++ G + G LG GD + + ++ ++
Sbjct: 175 VKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAG 234
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
+T+A + G+L+ WGD +G++G + VP C + +P V
Sbjct: 235 SNTSAAL-----------TEDGELYMWGDNSEGQIGLASESNVCVP-CRVVIGKP-VSWV 281
Query: 305 ACGHSLTVALTTSGHVYTMGSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSY 361
+CG+ + +TT G +YT G P G+LG + ++P V G K V ++ACG
Sbjct: 282 SCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGK--VNQVACGGG 339
Query: 362 HVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAI 418
H LT + +VYT+G G G+LG G S P +VE L+ +++ +ACG N TA I
Sbjct: 340 HTVALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALI 396
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 153/317 (48%), Gaps = 29/317 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDV 116
G K + P +++ V+ ACG H + + G V++ G S G+LG G +
Sbjct: 155 LGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERT 214
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
++ S I+ ++ G + A+T G+LY WGD + G +G +E + VP RV
Sbjct: 215 TFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSE--GQIGLASESNVCVPCRV 272
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKG 234
+ G VS +SCG +H+A+VT+ G+L+TFG+ G LG K+ IP+ V + G
Sbjct: 273 ---VIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISG 329
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCV 293
+ + ACG HT A+ E V +T+G G+ G+LG G + VP V
Sbjct: 330 -KVNQVACGGGHTVALTEEDV-------------YTFGLGEFGQLGLGTCIFETSVPKVV 375
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF- 352
L + VACG + T ++ +G +YT G +G+LG + N+ L +F
Sbjct: 376 EHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLG--LGEENFTNQFIPTLCSNFL 433
Query: 353 ---VEEIACGSYHVAVL 366
V +ACG H+ V
Sbjct: 434 RFSVHLVACGGCHMLVF 450
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 115/242 (47%), Gaps = 25/242 (10%)
Query: 9 FRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK 68
+++ SA S++S D G++++WG+ + + G+ +S++
Sbjct: 226 YKIKQLSAGSNTSAALTED-----GELYMWGDNSEGQI------------GLASESNVCV 268
Query: 69 ALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALS 126
+ V ++CG H+ALV GE++++GE G+LG + H P+L+ +S
Sbjct: 269 PCRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGIS 328
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
+ VACG HT A+T D+YT+G G FG LG G + +V L +
Sbjct: 329 G-KVNQVACGGGHTVALT-EEDVYTFGLG--EFGQLGLGTCIFETSVPKVVEHLRKQKIH 384
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVS--IPREVESLKGLRTVRAACGV 244
++CG HTA+++ G ++TFGDG G LG G+ + IP + ACG
Sbjct: 385 YVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGG 444
Query: 245 WH 246
H
Sbjct: 445 CH 446
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 317 SGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
SG V+T G + + +P++ L + +++CG H A +T +++Y G
Sbjct: 97 SGAVFTFGKSKFAE--------NIPSKF--WLRNDTLAQLSCGDEHTAFVTGNSKLYMLG 146
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFT 415
G+LG G N P+ V+ALK ++VK ACG N T
Sbjct: 147 SNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 164/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L I + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG +D + P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDA 124
LP+ +++ L V ++CG H+ V +G VF+WG S G+LG G ++ PK I
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGI 183
L+++ I V+CG YH+ A++ +++WG ++ G LG G E S P+RV LEGI
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLKGLRTVRA 240
++ ++ G H+ ++ G F +G + G L R + P V +LK L V
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CG HTA + + GK+FT+GD G+LG+ K P V ++
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGL 288
Query: 301 FCRVACGHSLTVALT-TSGHVYTMG 324
++ CG T+A T+G V + G
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + A GE H+ + + + + GD + G LG
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE + V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L ++ ++ +CG +H+ A+ + ++F+WG G+LG G + ++
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALSK------------DSQVFSWGKNSHGQLGLGKEFPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVLT +V+T+G +G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 112/222 (50%), Gaps = 13/222 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ +G LG G K S PK + + + + ++CG H+ ++
Sbjct: 94 GRVFAWGAGS-EGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALS 144
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K +VFSWG+ S G+LG G + P+ + +L + + VA G H+ A++L G +
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 152 WGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG + L G V P V G L+ + V ISCG HTAV+T G++FTFGD
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
G LG+ P+ VE + GL + + CG +HT A V
Sbjct: 264 RSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVH 304
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L +
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG + + G N V + S+ P ++ + L V I+CG H A++
Sbjct: 200 GTSFGWGSNSAGQLALSGRN-------VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYT 151
+ G+VF++G+ G+LG+ + P+L++ + + + + CG YHT A V +G + +
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVS 311
Query: 152 WGDG 155
+G G
Sbjct: 312 FGHG 315
>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
Length = 551
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 143/287 (49%), Gaps = 22/287 (7%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSW 100
D + G N G C G+ + S++ P+ L+S + +++ G G H L +GEVF+W
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTW 123
Query: 101 GEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
G + +LG+G + L P I LSN + VACG YH+ +T G+++ WG N
Sbjct: 124 GHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NS 181
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG G
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
+ P V +L+G+R R ACG HT + + G+++ WG G+L
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQL 289
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G G+K + PT V + + +A HS + A T GHVY G
Sbjct: 290 GTGNKSNQSYPTPV-TMEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCA 142
G E+F G G LG G + P+ +D+LS I ++ G H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 113
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G+++TWG Y+ LG+G VP +++ L V ++CG +H+ V+TS G
Sbjct: 114 ATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD--------- 222
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G+++ WG G+LG G + P VAAL RVACG++ T+ LT G VY
Sbjct: 223 ---TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVY 279
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
G+ YGQLG +++ P V + + +E AC S H A T VY WG+
Sbjct: 280 AWGANSYGQLGTGNKSNQSYPTPVTMEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++S+S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P ++ + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTMEKDRIIEIAACHSTHTSA 323
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGS-----------GPHIVLA 114
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|74183965|dbj|BAE37031.1| unnamed protein product [Mus musculus]
Length = 714
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 119/241 (49%), Gaps = 32/241 (13%)
Query: 106 GRLGHGVDSDVLHPKLIDALSNMNIELVACG--EYHTCAVTLSGDLYTWGDGTYNFGLLG 163
GRLGH D L PKL++AL + +ACG + T +T +++WGDG Y G LG
Sbjct: 1 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDY--GKLG 58
Query: 164 HGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV 223
G VP +++ L G+ V + CG + +T +G ++T+G G + LGHG V
Sbjct: 59 RGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV 117
Query: 224 SIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 283
PR+V+ L+G + + A G H E G+++TWGD D+G+LG G
Sbjct: 118 RRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYTWGDNDEGQLGDGT 165
Query: 284 KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNR 343
A P VAAL RVACG + T+A +TS P + GKLP +
Sbjct: 166 TNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS---------------KPASAGKLPAQ 210
Query: 344 V 344
V
Sbjct: 211 V 211
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC--SSGKLFT 270
G LGH D + P+ VE+L+G R + ACG + + C +++
Sbjct: 1 GRLGHSDSEDQLKPKLVEALQGHRVIDIACG------------SGDAQTLCLTDDDTVWS 48
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WGDGD G+LG G + VP + +L +V CG +VALT SG VYT G Y +
Sbjct: 49 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 108
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG+ D + P +V+G K + IA GS H T EVYTWG G+LG G T+
Sbjct: 109 LGHGSDDHVRRPRQVQGLQGKKVI-AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 167
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
P LV AL+ K+V +ACG+ T A
Sbjct: 168 AIQRPRLVAALQGKKVNRVACGSAHTLA 195
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 108/208 (51%), Gaps = 12/208 (5%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALV--NKQGEVFSWGEESGGRLGHGVDSDVLHPK 120
D PK +E+ V +IACG A + V+SWG+ G+LG G P
Sbjct: 10 DQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPM 69
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPL 180
ID+L+ + + V CG + A+T SG +YTWG G Y+ LGHG++ P++V G L
Sbjct: 70 KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH--RLGHGSDDHVRRPRQVQG-L 126
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+G V +I+ G H T G+++T+GD G LG G ++ PR V +L+G + R
Sbjct: 127 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRV 186
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKL 268
ACG HT A S+S S+GKL
Sbjct: 187 ACGSAHTLAW-------STSKPASAGKL 207
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 34 DVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNK 93
D +W G GD G L R GS G K+ P ++S L V + CG + + + K
Sbjct: 43 DDTVWSWGDGDY---GKLGRGGSD-GCKV----PMKIDSLTGLGVVKVECGSQFSVALTK 94
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G V++WG+ RLGHG D V P+ + L + +A G H T G++YTWG
Sbjct: 95 SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWG 154
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG-----PWHTAVVTSAGQL 204
D + G LG G + P+ V L+G V+ ++CG W T+ SAG+L
Sbjct: 155 DN--DEGQLGDGTTNAIQRPRLV-AALQGKKVNRVACGSAHTLAWSTSKPASAGKL 207
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 329 GQLGNPQADGKLPNRVEGKLSKSFVEEIACGS--YHVAVLTSKTEVYTWGKGANGRLGHG 386
G+LG+ ++ +L ++ L V +IACGS LT V++WG G G+LG G
Sbjct: 1 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG 60
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
+D P +++L V + CG+ F+ A+
Sbjct: 61 GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 92
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICL 420
GRLGH D++D+ P LVEAL+ +V IACG+ +CL
Sbjct: 1 GRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 40
>gi|363741143|ref|XP_415822.3| PREDICTED: serine/threonine-protein kinase Nek8 [Gallus gallus]
Length = 698
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 155/357 (43%), Gaps = 54/357 (15%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGD-- 154
+++WG G+ + + P L N + V+ G VT SG L W
Sbjct: 320 IYTWGS--------GITTPLRLPML-----NTEVVQVSAGRTQKAGVTKSGRLIMWEAPP 366
Query: 155 -GTYNFGLLGHGNEVSHWVPKRVNGPLEG---IHVSSISCGPWHTAVVTSAGQLFTFGDG 210
GT L E P+ V+ LEG + + +SCG TA +T G + TFG G
Sbjct: 367 MGTAGGPSLPGATE--QLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSG 424
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
+ G LGHG+ VS P+ VE+L G V+ ACG H AV SN ++F
Sbjct: 425 SNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAV----------SN--EREVFA 472
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG GD GRLG G E P VA E RV CG ++ LT + + GS +
Sbjct: 473 WGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNK 532
Query: 331 LGNPQADGKLPNRVEGKLSKSFV-----------EEIAC---GSYHVAVLTSKTEVYTWG 376
LG + E ++ ++ V E + C G+ H A +T+ + YT+G
Sbjct: 533 LGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFG 592
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCS 433
+G+LG + P LV L+ +V +ACG FT AI G D +C+
Sbjct: 593 SNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI-------GADGEVCT 642
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 155/346 (44%), Gaps = 17/346 (4%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGV---DSDVLHPKLI----DALSNMN 129
+V ++ G A V K G + W G G ++ L P+ + + S +
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVT 398
Query: 130 IELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS 189
I+ V+CG+ T +T G + T+G G+ G LGHGN PK V L G + ++
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSN--GCLGHGNFTDVSQPKIVEA-LLGYEMVQVA 455
Query: 190 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAA 249
CG H V++ ++F +G G G LG G + + P++V R CG+ +
Sbjct: 456 CGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMV 515
Query: 250 V-VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV--EPNFCRVAC 306
+ V + S+ C+ L ++ +EA + +A + EP C
Sbjct: 516 LTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVC-ADI 574
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
G + + A+T SG YT GS +GQLG N + ++P+ V G L V +ACG
Sbjct: 575 GTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LRAMKVTVVACGDAFTVA 633
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDD-RNSPSLVEALKDKQVKSIAC 410
+ + EV TWGKGA GRLG D + P +E V S+AC
Sbjct: 634 IGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 6/294 (2%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
+ LE + +++++CG A + +G + ++G S G LGHG +DV PK+++AL
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLG 448
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
+ VACG H AV+ +++ WG G + G LG G H P++V P E
Sbjct: 449 YEMVQVACGASHVLAVSNEREVFAWGRG--DNGRLGLGTLECHNSPQQVAVPPEH-EAQR 505
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA-CGVWH 246
+ CG + V+T Q+ G LG S P + ++ A +
Sbjct: 506 VICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLN 565
Query: 247 TAAVVEVMVGNS-SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVA 305
VV +G + S++ +SG+ +T+G G+LG VP V L VA
Sbjct: 566 QEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVA 625
Query: 306 CGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF-VEEIAC 358
CG + TVA+ G V T G G+LG + +P V+ + + + V +AC
Sbjct: 626 CGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
D S PK +E+ + ++ +ACG H V+ + EVF+WG GRLG G P+ +
Sbjct: 436 DVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQV 495
Query: 123 DALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK-------- 174
+ V CG + +T++ + G N L + P+
Sbjct: 496 AVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATV 555
Query: 175 ---RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES 231
+ PL V G H+A VT++GQ +TFG G LG ++ +P V
Sbjct: 556 FTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG 615
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 285
L+ ++ ACG T A+ + G++ TWG G +GRLG D+E
Sbjct: 616 LRAMKVTVVACGDAFTVAI------------GADGEVCTWGKGARGRLGRKDEE 657
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 125
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 126 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 184
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ P+RV G L+ V +I+CG V +G+++ +G G LG
Sbjct: 185 -NSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 243
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 244 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 291
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 292 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 137/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+LS I AC Y H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPH 115
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 116 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 173
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + PR V L+ V ACG AVV+
Sbjct: 174 SDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 227
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 228 ------SGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 281
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 282 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 340
Query: 377 K 377
+
Sbjct: 341 Q 341
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 134
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 135 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 182
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + P V ++ +ACG +A+ SG VY G GQL
Sbjct: 183 YNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQL 242
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 243 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 302 QSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 120
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 121 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + P RV G L V IACG + EVY WG N
Sbjct: 180 AWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN 239
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 240 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 139/275 (50%), Gaps = 23/275 (8%)
Query: 57 CFGV-KMDSSL-PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSWGEESGGRLGHGVD 113
C GV + S++ P+ L+S + +++ G G H L GEVF+WG + +LG+G
Sbjct: 77 CLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTT 136
Query: 114 SDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
+ L P I LSN + VACG YH+ +T G+++ WG N G +G G+ + +
Sbjct: 137 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTANQPI 194
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+RV G L+ V +ISCG + V G+++ +G G LG G + P V +L
Sbjct: 195 PRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAAL 254
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+G+R R ACG HT + + G+++ WG G+LG G+K + PT
Sbjct: 255 QGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYPTP 302
Query: 293 VAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
V +VE + +A HS + A T GHVY G
Sbjct: 303 V--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCA 142
G E+F G G LG G + P+ +D+L+ I ++ G H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVL 113
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+TS G
Sbjct: 114 ATTDGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++F +G G +G G + IPR V L+ + +CG + AVV+
Sbjct: 172 EVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVD--------- 222
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G+++ WG G+LG G + P VAAL RVACG++ T+ LT G +Y
Sbjct: 223 ---TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIY 279
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
G+ YGQLG +++ P V + + +E AC S H A T VY WG+
Sbjct: 280 AWGANSYGQLGTGNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 336
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++S+S G H + T+ G++FT+G +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDS-LTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ ++CG ++A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + ++Y WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGS-----------GPHIVLA 114
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 115 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V I+CG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 186/424 (43%), Gaps = 66/424 (15%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+ WG G DG LG G+N K + ALE V+++ G R++ +
Sbjct: 7 LIAWGAGE-DGQLGIGINEE------KEWVCVVNALEP---YKVRSVVAGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G++F+WG G LGH ++ + P + AL+N+NI A G +H AV G Y WG
Sbjct: 57 GKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 154 DGTYNFGLLGHGNEVSH----------WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
Y G G E +P+R L V ++ G H+ V+T G
Sbjct: 117 GNEY--GQCGEEPERKDDTGKTLRRDIVIPQRCAPKLV---VRQVAAGGTHSVVLTREGH 171
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G GD K +S+P V+ L+ ++ + A G +H A+ E
Sbjct: 172 VWTWGQ----PWPPGDIKQISVPVRVQGLEKVKLI--AVGAFHNLALQE----------- 214
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G L+ WG+ + G+LG GD + + P V L +A G + ALT G VY
Sbjct: 215 -DGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGW 273
Query: 324 GSPVYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G +G+LG N ++ +P +V L+ + +++CG H LT ++++G+G +
Sbjct: 274 GRGEHGRLGFGDNDKSSKMVPQKVN-LLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDH 332
Query: 381 GRLGHGDTDDRNSPSLV--------------EALKDKQVKSIACGTNFTAAICLHKWVSG 426
GRLG+G P V EA K +ACG T AI K
Sbjct: 333 GRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVEWK---- 388
Query: 427 VDQS 430
VD+S
Sbjct: 389 VDES 392
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 22/126 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G N K +P+ + D+ ++CGG H+ +
Sbjct: 268 GEVYGWGRGE-HGRLGFGDND-------KSSKMVPQKVNLLAGEDIVQLSCGGTHSVALT 319
Query: 93 KQGEVFSWGEESGGRLGHG----------VDSDVLHPKLI----DALSNMNIELVACGEY 138
+ G +FS+G GRLG+G V +D+ PK + +A + +LVACG
Sbjct: 320 QDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAKLVACGGR 379
Query: 139 HTCAVT 144
HT A+
Sbjct: 380 HTLAIV 385
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 120/214 (56%), Gaps = 15/214 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G + + P++++ LS + + ++ G
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAG 317
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ A+++SG++Y+WG +FG LG G+ P + L+ V ++CG HTA
Sbjct: 318 KAHSMALSMSGNIYSWGRN--DFGQLGLGHTDGKDFPSLIEA-LDNQKVEFLACGGSHTA 374
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T G +FTFG G G LGH ++ PR V L G R + ACG HT A V +
Sbjct: 375 LLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDL-- 432
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
GK+F++G G +G+LG+G +L+P
Sbjct: 433 ---------GKVFSFGSGKEGQLGNGGTHNQLIP 457
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 120/222 (54%), Gaps = 14/222 (6%)
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLK 233
R L+ + I+CG +H+ ++ G+LF +G G LG G + S++IP+ VE+L
Sbjct: 248 RFQCILQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLS 307
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
G+ V+ + G H+ A+ SG +++WG D G+LG G + K P+ +
Sbjct: 308 GIPLVQISAGKAHSMAL------------SMSGNIYSWGRNDFGQLGLGHTDGKDFPSLI 355
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
AL +ACG S T LT G V+T G+ +GQLG+ +L R+ +L+ + V
Sbjct: 356 EALDNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRV 415
Query: 354 EEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
+IACG H +A ++ +V+++G G G+LG+G T ++ P
Sbjct: 416 TQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP 457
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 27/268 (10%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + ++ G + +++ G+ F + + + H + L
Sbjct: 207 PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEY------------NYSIEHARFQCILQ 254
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I + CG+YH+ A++ G+L+ WG + G LG G++ + ++ L GI +
Sbjct: 255 EKXIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGIGSQFASIAIPQIVENLSGIPLV 312
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G FG LG G P +E+L + ACG H
Sbjct: 313 QISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSH 372
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + G +FT+G G G+LGH + +L P V L ++AC
Sbjct: 373 TALLTK------------DGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIAC 420
Query: 307 GHSLTVALTTS-GHVYTMGSPVYGQLGN 333
G T+A + G V++ GS GQLGN
Sbjct: 421 GRQHTLAYVSDLGKVFSFGSGKEGQLGN 448
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 112/235 (47%), Gaps = 27/235 (11%)
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
+ S+ G + +++S G+ F + S+ R L+ ++ CG
Sbjct: 218 IHSVDQGAEYMLILSSDGKPFEYN------------YSIEHARFQCILQEKXIIQITCGD 265
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCR 303
+H+ A+ G+LF WG G+LG G + A + +P V L +
Sbjct: 266 YHSLAL------------SKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQ 313
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYH 362
++ G + ++AL+ SG++Y+ G +GQLG DGK P+ +E L VE +ACG H
Sbjct: 314 ISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEA-LDNQKVEFLACGGSH 372
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
A+LT V+T+G G +G+LGH T + P LV L +V IACG T A
Sbjct: 373 TALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLA 427
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 13/195 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG +GS F ++P+ +E+ + + I+ G H+ ++
Sbjct: 275 GELFAWGQNL-HGQLG-----IGSQFA---SIAIPQIVENLSGIPLVQISAGKAHSMALS 325
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG G+LG G P LI+AL N +E +ACG HT +T G ++T+
Sbjct: 326 MSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 385
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G + G LGH + + P+ V L G V+ I+CG HT A V+ G++F+FG G
Sbjct: 386 GAGKH--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGK 442
Query: 212 FGVLGHGDRKSVSIP 226
G LG+G + IP
Sbjct: 443 EGQLGNGGTHNQLIP 457
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DG + + A+ C+ L E ++ CG ++AL+ G ++ G ++GQLG
Sbjct: 234 DGKPFEYNYSIEHARF--QCI--LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 289
Query: 333 --NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
+ A +P VE LS + +I+ G H L+ +Y+WG+ G+LG G TD
Sbjct: 290 IGSQFASIAIPQIVEN-LSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDG 348
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAAI 418
++ PSL+EAL +++V+ +ACG + TA +
Sbjct: 349 KDFPSLIEALDNQKVEFLACGGSHTALL 376
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 91 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 146
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 147 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 205
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ V+ P+RV G L+ V +I+CG V +G+++ +G G LG
Sbjct: 206 -NSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQLG 264
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G+ + P V +L+G+R R ACG HT + + G+++ WG
Sbjct: 265 LGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 312
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V + + +A HS + A T GHVY G
Sbjct: 313 GQLGTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 361
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 137/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G E+F G G LG G + P+ +D+LS I AC Y H
Sbjct: 80 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPH 136
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG Y+ LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 137 IVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT 194
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + PR V L+ V ACG AVV+
Sbjct: 195 SDGEVFAWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVD------ 248
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG+++ WG G+LG G+ + P VAAL RVACG++ T+ LT G
Sbjct: 249 ------SGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG 302
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 303 QVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 361
Query: 377 K 377
+
Sbjct: 362 Q 362
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 97 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 155
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 156 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 203
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + P V ++ +ACG +A+ SG VY G GQL
Sbjct: 204 YNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGNGQL 263
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 264 GLGNSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 322
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 323 QSYPTPVTVEKDRIIEIAACHSTHTSA 349
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 92 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 141
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 142 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 200
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + P RV G L V IACG + EVY WG N
Sbjct: 201 AWGYNNSGQVGSGSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNGN 260
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G++ ++ +P V AL+ +V+ +ACG T +
Sbjct: 261 GQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 298
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 161/337 (47%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G + ++ P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T +G +Y G N G LG G+ ++ + +S G +A +T
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D+ +V IP EV K + + +CG +H+A V
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG ++ P V + E +VACG TV LT
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VY G +GQ LG + P +E ++ + I+CG H A++T +YT+G
Sbjct: 300 VVYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L V+ IACG
Sbjct: 359 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 25/291 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
HT V T G ++ G G LG GD ++ T++ + G +AA+
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 194
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E GKLF WGD +G++G DK +P V V ++CG+ +
Sbjct: 195 E------------DGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHS 240
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+T G +YT G P G+LG P + + P RV G + V ++ACG H VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTE 298
Query: 369 KTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
K VY +G G G+LG G + + P ++E +KD+++ I+CG N TA +
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 31/311 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDA 124
P +++ V+ ACG H + G V++ G + G+LG G D D H +++
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I+ ++ G + A+T G L+ WGD + G +G ++ + +P V G
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEVT---VGKP 229
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAAC 242
+S ISCG +H+A VT G+L+TFG+ G LG + ++ R + + G+ R ++ AC
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 288
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G HT + E +V + +G G G+LG G + P + + +
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKI 335
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIA 357
C ++CG + T +T G +YT G +G+LG + N+ L +F V+ IA
Sbjct: 336 CHISCGENHTALMTELGLLYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNFLRFAVQLIA 393
Query: 358 CGSYHVAVLTS 368
CG H+ V +
Sbjct: 394 CGGCHMLVFAT 404
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S PK +E + +I+CG H AL+ + G ++++G+ G+LG G++ ++ P
Sbjct: 319 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Query: 120 KLIDALSNMNIELVACGEYH 139
L ++L+ACG H
Sbjct: 379 TLCSNFLRFAVQLIACGGCH 398
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 15/214 (7%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACG 136
+ I CG H+ ++K GE+F+WG+ G+LG G P++++ L+ + + ++ G
Sbjct: 140 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAG 199
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
E H+ A+++SG++Y+WG FG LG + S P + L+ V ++CG HTA
Sbjct: 200 EAHSMALSMSGNIYSWGKN--EFGQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTA 256
Query: 197 VVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
++T G LFTFG G G LGH ++ P V L G R + ACG WHT A V +
Sbjct: 257 LLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDL-- 314
Query: 257 NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
GK+F++G G +G+LG+G +L+P
Sbjct: 315 ---------GKVFSFGSGKEGQLGNGGTRDQLIP 339
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALS 126
PK ++ + + ++ G H +++ G+ F + S + H + L
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDNYS-----------MKHLRFESILQ 136
Query: 127 NMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVS 186
I + CG+YH+ A++ G+L+ WG + G LG G + ++ L GI ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTAPQIVEHLAGIPLA 194
Query: 187 SISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
IS G H+ ++ +G ++++G FG LG +S P +E+L + ACG H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
TA + + G LFT+G G G+LGH + +L P VA L ++AC
Sbjct: 255 TALLTQ------------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302
Query: 307 GHSLTVALTTS-GHVYTMGSPVYGQLGN 333
G T+A + G V++ GS GQLGN
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGN 330
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 28/278 (10%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 178
PK I NM I + G H ++ G + + + Y+ L R
Sbjct: 88 PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDN--YSMKHL------------RFES 133
Query: 179 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRT 237
L+ + I+CG +H+ ++ G+LF +G G LG G + S + P+ VE L G+
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPL 193
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ + G H+ A+ SG +++WG + G+LG E+K P+ + AL
Sbjct: 194 AQISAGEAHSMAL------------SMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALD 241
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ACG S T LT G ++T G+ +GQLG+ +L + +L+ + V +IA
Sbjct: 242 NQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIA 301
Query: 358 CGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSP 394
CG +H +A ++ +V+++G G G+LG+G T D+ P
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG VG F ++ P+ +E + + I+ G H+ ++
Sbjct: 157 GELFAWGQNL-HGQLG-----VGRKFP---STTAPQIVEHLAGIPLAQISAGEAHSMALS 207
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG+ G+LG P LI+AL N +E +ACG HT +T G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G + G LGH + + P V L G V+ I+CG WHT A V+ G++F+FG G
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLV-AELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 212 FGVLGHGDRKSVSIP 226
G LG+G + IP
Sbjct: 325 EGQLGNGGTRDQLIP 339
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 181 EGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
+ + + S+ G H +++S G+ F + D S+ R L+ + ++
Sbjct: 95 KNMKIHSMDLGADHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVPTCVAALVEP 299
CG +H+ A+ G+LF WG G+LG G K + P V L
Sbjct: 144 TCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGI 191
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIAC 358
+++ G + ++AL+ SG++Y+ G +GQLG + K P+ +E L VE +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLAC 250
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
G H A+LT ++T+G G +G+LGH T + P LV L +V IACG T A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF- 352
+ L E ++ CG ++AL+ G ++ G ++GQLG K P+ ++ +
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLG---VGRKFPSTTAPQIVEHLA 189
Query: 353 ---VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
+ +I+ G H L+ +Y+WGK G+LG T+ ++SPSL+EAL +++V+ +A
Sbjct: 190 GIPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLA 249
Query: 410 CGTNFTAAI 418
CG + TA +
Sbjct: 250 CGGSHTALL 258
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 47/348 (13%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G S + P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGN--------EVSHWVPKRVNGPLEGIHVSSISCGP 192
T +G +Y G N G LG G+ ++ + P + + +S G
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+A +T G+LF +GD + G +G ++ +V IP EV K + + +CG +H+A V
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSL 310
+ G+L+T+G+ + G+LG ++ P V + + +VACG
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVACGGGH 292
Query: 311 TVALTTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
TV LT VY G +GQLG ++ K+ +R++ + + I+CG H A+
Sbjct: 293 TVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQK----ISHISCGENHTAL 347
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+T +YT+G G +G+LG G + N P+L V+ IACG
Sbjct: 348 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 27/292 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V T G ++ G G LG GD R G + + +++
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDD-------------RDTFHQIGFFTPSDIIK 181
Query: 253 VMVG--NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ N+S++ GKLF WGD +G++G +K +P V V ++CG+
Sbjct: 182 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYH 239
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +TT G +YT G P G+LG P + + P RV G K V ++ACG H VLT
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDK--VIQVACGGGHTVVLT 297
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
K VY +G G G+LG G + + P +++ +KD+++ I+CG N TA +
Sbjct: 298 EKV-VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSD 115
G K S P +++ V+ ACG H + G V++ G + G+LG G D D
Sbjct: 107 LGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD 166
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
H S++ I+ ++ G + A+T G L+ WGD + G +G N+ + +P
Sbjct: 167 TFHQIGFFTPSDI-IKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHE 223
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V G +S ISCG +H+A VT+ G+L+TFG+ G LG ++ ++ R + + G+
Sbjct: 224 VT---VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGI 279
Query: 236 --RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTC 292
+ ++ ACG HT + E +V + +G G G+LG G + P
Sbjct: 280 PDKVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKI 326
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
+ + + ++CG + T +T G +YT G +G+LG + N+ L +F
Sbjct: 327 IDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNF 384
Query: 353 ----VEEIACGSYHVAVLTS 368
V+ IACG H+ V +
Sbjct: 385 LKFTVQLIACGGCHMLVFAT 404
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ + + G+K S++ E V + I+CG H+A V
Sbjct: 197 GKLFMWGDNSEGQI------------GLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
GE++++GE G+LG + H P+ + + + I+ VACG HT +T +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT-EKVVY 302
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+G G FG LG G + ++ ++ +S ISCG HTA++T G ++TFGDG
Sbjct: 303 AFGLG--QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360
Query: 211 TFGVLGHG 218
G LG G
Sbjct: 361 RHGKLGLG 368
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV---ACGHSLTVALTT-SGHVYTMGSP 326
WG G G+ L P VA V P ++ A G + +L +G V+T G
Sbjct: 7 WGTGGLGQY--------LRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKT 58
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+ + +P++ K ++CG H A++T ++Y +G G+LG G
Sbjct: 59 KFAE--------NIPSKFWFKNDVPIC--LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG 108
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFT 415
+ P+ ++ALK ++VK ACG N T
Sbjct: 109 SKSAISKPTCIKALKPEKVKLAACGRNHT 137
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 145/292 (49%), Gaps = 32/292 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V + G+++ +G G LG
Sbjct: 180 -NSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 239 LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAA----LVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G+LG G+K + P V ++E C +A H+ + A T GHVY G
Sbjct: 287 GQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLA--HT-SAAKTQGGHVYMWG 335
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLATTEGEVFT 122
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G +P ++ L V+ ++CG +H+ V+TS G++F +G
Sbjct: 123 WGHNAYS--QLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV ++G+++
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVV------------NTGEVYV 228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P ++AL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC H A T VY WG+
Sbjct: 289 LGTGNKSNQSYPAPVVVEKDR-IIEIAACHLAHTSAAKTQGGHVYMWGQ 336
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRISA-LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC T+A
Sbjct: 297 QSYPAPVVVEKDRIIEIAACHLAHTSA 323
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G L+P ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVL 272
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 171 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKVVV---NIACGQMCS 217
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P I AL + ++ VACG HT +T G
Sbjct: 218 MAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 278 VYAWGANSY--GQLGTGNKSNQSYPAPVVVEKDRI-IEIAACHLAHTSAAKTQGGHVYMW 334
Query: 208 GD 209
G
Sbjct: 335 GQ 336
>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Papio anubis]
gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
Length = 556
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 143/287 (49%), Gaps = 22/287 (7%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSW 100
D + G N G C G+ + S++ P+ L+S + +++ G G H L +GEVF+W
Sbjct: 70 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTW 128
Query: 101 GEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
G + +LG+G + L P I LSN + VACG YH+ +T G+++ WG N
Sbjct: 129 GHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NS 186
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG G
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 246
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
+ P V +L+G+R R ACG HT + + G+++ WG G+L
Sbjct: 247 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQL 294
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G G+K + PT V + + +A HS + A T GHVY G
Sbjct: 295 GTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 340
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCA 142
G E+F G G LG G + P+ +D+LS I ++ G H
Sbjct: 59 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 118
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G+++TWG Y+ LG+G VP +++ L V ++CG +H+ V+TS G
Sbjct: 119 ATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDG 176
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 177 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD--------- 227
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G+++ WG G+LG G + P VAAL RVACG++ T+ LT G VY
Sbjct: 228 ---TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVY 284
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
G+ YGQLG +++ P V + + +E AC S H A T VY WG+
Sbjct: 285 AWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 341
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++S+S G H + T+ G++FT+G +
Sbjct: 76 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYS 134
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P ++ + L + + ACG +H+ + S G++F WG
Sbjct: 135 QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 182
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 183 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 242
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 243 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 301
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 302 QSYPTPVTVEKDRIIEIAACHSTHTSA 328
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 71 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGS-----------GPHIVLA 119
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 120 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 179
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 180 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 239
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 240 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 162/342 (47%), Gaps = 28/342 (8%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ IA G H+ ++ G V++WG S G+LG + P L+ L+N ++ G
Sbjct: 200 IKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATG--LSAGS 257
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAV 197
H+ G + WG TY G LG G S P++V+G L G V + H+ V
Sbjct: 258 NHSLVRQADGTTWVWGANTY--GQLGDGTTTSRSAPQQVSG-LAG--VDGVLGAELHSLV 312
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+ S G ++T+G G LG G ++ +P +V L G+ V A G H+ AV+
Sbjct: 313 LKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQ-HSVAVM------ 365
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
++G+++TWG +G+LG G VP ALVE VA G +A
Sbjct: 366 ------ANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHALVE--RTSVAAGRYHGLASKPD 417
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G GQLG+ A LP +V G + + +A G + L + V+ WG
Sbjct: 418 GTVWAWGDNAKGQLGDGTTAQRLLPTQVPGLTN---MVAVAAGHHSSLALKADGTVWAWG 474
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
ANG+LG+G T DR++P+ V L V SIA G A+
Sbjct: 475 DNANGQLGNGSTTDRSNPTQVPGLTG--VVSIAAGPGHALAV 514
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/357 (31%), Positives = 167/357 (46%), Gaps = 39/357 (10%)
Query: 31 ALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAAL 90
A G+V+ WG +G LG G + S++PK S +++ ++A G H
Sbjct: 366 ANGEVWTWGHNV-EGQLGEGSSSY---------SAVPK--RSHALVERTSVAAGRYHGLA 413
Query: 91 VNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
G V++WG+ + G+LG G + L P + L+NM VA G + + A+ G ++
Sbjct: 414 SKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPGLTNM--VAVAAGHHSSLALKADGTVW 471
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WGD G LG+G+ P +V G L G V SI+ GP H V + G L+T+GD
Sbjct: 472 AWGDNAN--GQLGNGSTTDRSNPTQVPG-LTG--VVSIAAGPGHALAVKADGTLWTWGDN 526
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG G IP +V + G+ V A G++H+ VV+V G ++
Sbjct: 527 NTGQLGDGTTVDRPIPTQVPGVTGV--VSVAAGLYHS-LVVKV-----------DGTVWA 572
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG +G+LG G + VP+ L HSL AL T G V+ G ++GQ
Sbjct: 573 WGSNYEGQLGGGTTTIRPVPSQTPNLTGVVAITAGLYHSL--ALKTDGTVWAWGYNLHGQ 630
Query: 331 LGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
LGN ++P +V G S + G YH + + V+TWG G+LG G
Sbjct: 631 LGNGNTTTQQVPTQVPG---FSGGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDG 684
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 153/325 (47%), Gaps = 34/325 (10%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
++ G H+ + G V++WG G+LG G + P + + + +A GE+H
Sbjct: 653 SLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTG--VSFLAAGEFH 710
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGPWHTAV 197
+ A+ G + WG + + G LG G+ H+ P R+ G ++ G TA
Sbjct: 711 SVALRTDGTAWAWG--SNDKGQLGDGSARWHYAPTLSRLVG------ARGLAAGDRFTAA 762
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
S G ++ +GD T+G LG G + P +V L + + A G VV V +
Sbjct: 763 RKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEG-----HVVVVKM-- 815
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
G ++TWG+ KG+LG G +LVPT V L VA G++ ++AL
Sbjct: 816 -------DGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLT--GVVAVAAGYAHSLALKAD 866
Query: 318 GHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK--SFVEEIACGSYHVAVLTSKTEVYTW 375
G V+ G +YGQLG DG RV ++ + V +A G+YH + ++ W
Sbjct: 867 GTVWGWGENIYGQLG----DGTTTQRVAPTQAQGLTVVLSMASGTYHGLARKADGTLWAW 922
Query: 376 GKGANGRLGHGDTDDRNSPSLVEAL 400
G A+G+LG G T R +P+LV +L
Sbjct: 923 GYNAHGQLGIGTTTTRLAPTLVPSL 947
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 167/421 (39%), Gaps = 98/421 (23%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
+V +A G H+ + G V++WG GRLG G + L P + L I+ +A G
Sbjct: 149 EVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAG 206
Query: 137 EYHTCAVTLSGDLYTWG------------------------------------------D 154
H+ A+ +G ++ WG D
Sbjct: 207 NAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQAD 266
Query: 155 GTY------NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG 208
GT +G LG G S P++V+G L G V + H+ V+ S G ++T+G
Sbjct: 267 GTTWVWGANTYGQLGDGTTTSRSAPQQVSG-LAG--VDGVLGAELHSLVLKSDGTVWTWG 323
Query: 209 DGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACG-----------VWHTAAVVEVMVGN 257
G LG G ++ +P +V L G+ V A G VW VE +G
Sbjct: 324 SNQRGQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGE 383
Query: 258 SSSSNCS--------------------------SGKLFTWGDGDKGRLGHGDKEAKLVPT 291
SSS + G ++ WGD KG+LG G +L+PT
Sbjct: 384 GSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPT 443
Query: 292 CVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSK 350
V L N VA GH ++AL G V+ G GQLGN D P +V G
Sbjct: 444 QVPGLT--NMVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPG---L 498
Query: 351 SFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIAC 410
+ V IA G H + + ++TWG G+LG G T DR P+ V + V S+A
Sbjct: 499 TGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTG--VVSVAA 556
Query: 411 G 411
G
Sbjct: 557 G 557
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 167/362 (46%), Gaps = 34/362 (9%)
Query: 59 GVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH 118
G +D +P + V V ++A G H+ +V G V++WG G+LG G +
Sbjct: 534 GTTVDRPIPTQVPG--VTGVVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPV 591
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVN 177
P L+ + + G YH+ A+ G ++ WG YN G LG+GN + VP +V
Sbjct: 592 PSQTPNLTG--VVAITAGLYHSLALKTDGTVWAWG---YNLHGQLGNGNTTTQQVPTQVP 646
Query: 178 GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
G G+ S+ G +H+ + + G ++T+G G LG G S + P +V G+
Sbjct: 647 GFSGGV---SLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF 703
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
+ A G +H+ A+ + G + WG DKG+LG G PT ++ LV
Sbjct: 704 L--AAGEFHSVAL------------RTDGTAWAWGSNDKGQLGDGSARWHYAPT-LSRLV 748
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK-SFVEEI 356
+A G T A + G V+ G YGQLG+ L R ++S + VE +
Sbjct: 749 GAR--GLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGT---TLATRSPAQVSGLTDVEGL 803
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTA 416
A G HV V+ V+TWG A G+LG G T R P+ V L V ++A G +
Sbjct: 804 AAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG--VVAVAAGYAHSL 861
Query: 417 AI 418
A+
Sbjct: 862 AL 863
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 33/347 (9%)
Query: 68 KALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSN 127
KA E+A L + +A G H V G V++WG+ + G+LG+G D P + A
Sbjct: 42 KAAETASRLGL--VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVP--VRAWGL 97
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSS 187
NI V G+ H+ A+ G ++TWG NFG LG G P +V G E V
Sbjct: 98 WNISAVGAGDLHSLAMKSDGTVWTWGG--NNFGQLGDGTTTGRQAPVQVPGLGE---VVR 152
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
++ G H+ + + G ++ +G G LG G +P +V+ GL T++A
Sbjct: 153 VAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQ---GLPTIKA------- 202
Query: 248 AAVVEVMVGNSSSSNC-SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+ GN+ S +G+++ WG G+LG +++P V L
Sbjct: 203 -----IAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGS 257
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAV 365
HSL G + G+ YGQLG+ + P +V G + V+ + H V
Sbjct: 258 NHSLV--RQADGTTWVWGANTYGQLGDGTTTSRSAPQQVSG---LAGVDGVLGAELHSLV 312
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGT 412
L S V+TWG G+LG G + R P V+ + V ++A G+
Sbjct: 313 LKSDGTVWTWGSNQRGQLGDGTQEQRLVP--VQVMGLSGVVAVAAGS 357
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 147/328 (44%), Gaps = 27/328 (8%)
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
++ + +A G R A G V++WG+ + G+LG G P + L++ +E +A
Sbjct: 747 LVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLA 804
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
GE H V + G ++TWG+ G LG G VP +V G L G V +++ G H
Sbjct: 805 AGEGHVVVVKMDGTVWTWGNNAK--GQLGDGTTTRRLVPTQVPG-LTG--VVAVAAGYAH 859
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ + + G ++ +G+ +G LG G P + + L + A G +H A
Sbjct: 860 SLALKADGTVWGWGENIYGQLGDGTTTQRVAPTQAQGLT--VVLSMASGTYHGLA----- 912
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
+ G L+ WG G+LG G +L PT V +L ++ H ++AL
Sbjct: 913 -------RKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSL--SGVVSLSATHQHSLAL 963
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G V+ G GQLG+ + +P + S S V+ ++ G + + + V+
Sbjct: 964 KPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAP---SLSSVKAVSAGFEYSLAVKADGTVW 1020
Query: 374 TWGKGANGRLGHGDTDDRNSPSLVEALK 401
+WG G+LG G R +P+ V L
Sbjct: 1021 SWGINDRGQLGSGTATPRATPTQVAGLN 1048
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 27/324 (8%)
Query: 75 VLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVA 134
+ DV+ +A G H +V G V++WG + G+LG G + L P + L+ + VA
Sbjct: 797 LTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG--VVAVA 854
Query: 135 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWH 194
G H+ A+ G ++ WG+ Y G LG G P + G V S++ G +H
Sbjct: 855 AGYAHSLALKADGTVWGWGENIY--GQLGDGTTTQRVAPTQAQGLTV---VLSMASGTYH 909
Query: 195 TAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
+ G L+ +G G LG G + P V SL G+ ++ A H+ A+
Sbjct: 910 GLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVSLSATHQ--HSLAL---- 963
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVAL 314
G ++ WG G+LG G + VPT +L + V+ G ++A+
Sbjct: 964 --------KPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAPSL--SSVKAVSAGFEYSLAV 1013
Query: 315 TTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G V++ G GQLG+ A + P +V G S V + H V+++ +
Sbjct: 1014 KADGTVWSWGINDRGQLGSGTATPRATPTQVAGLNS---VTLLLAARAHALVVSADGTMR 1070
Query: 374 TWGKGANGRLGHGDTDDRNSPSLV 397
+G G+LG GDT R +P+ V
Sbjct: 1071 GFGDNEAGQLGAGDTLIRLAPNQV 1094
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQ-ADGKLPNRVEGK 347
+ T AA VA G T+A+ + G V+ G YGQLGN D ++P R G
Sbjct: 38 LATAKAAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGL 97
Query: 348 LSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKS 407
+ + + G H + S V+TWG G+LG G T R +P V L +V
Sbjct: 98 WN---ISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGL--GEVVR 152
Query: 408 IACGTNFTAAI 418
+A G + + A+
Sbjct: 153 VAAGFSHSLAL 163
>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
Length = 922
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 174/416 (41%), Gaps = 79/416 (18%)
Query: 50 GLNRVGS-CFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRL 108
G N+ G GV D+ LP+ + + + I+ H A++ + G++ G G+L
Sbjct: 173 GKNQEGELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKL 232
Query: 109 G-HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN--FGLLGHG 165
G +++ +++ L + V+CG+YHT + G +Y +G + +
Sbjct: 233 GIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTLVLIEDGTVYQFGGSLFKDKKDKINRP 292
Query: 166 NEVSHWVPKRVNGPLEGIH---VSSISCGPWHTAVVTSAGQLFTFGDG----TFGVLGHG 218
+ + V P++ ++ + I CG +H+A + G L+T+G G G GHG
Sbjct: 293 QNPTQQIAPNVPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHG 352
Query: 219 DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGR 278
++ P +V+ L R V+ ACG +HT A+ S +L+ +G G+ G
Sbjct: 353 HNNALEYPEKVKYLSSKRIVKVACGGFHTLALT------------SENELYGFGSGNYGE 400
Query: 279 LGHGD----KEAKLVPTCVAAL--------------------------VEPNFCRVACGH 308
G+G+ + KL+ L +P A G
Sbjct: 401 CGNGEFMDTSKPKLIKFPNDHLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGG 460
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
++ +T G +Y+ G GQLGN V + A G H +LT
Sbjct: 461 RHSLIITNKGRLYSFGYGTNGQLGN-------------------VVQCAAGWNHSMILTE 501
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWV 424
+ +V++ G G +G+LGHGD D R + V++L +K + I G + H WV
Sbjct: 502 RGDVFSCGYGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFAGGS-------HSWV 550
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 109/257 (42%), Gaps = 68/257 (26%)
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWG----EESGGRLGHGVDSDVLHPK 120
++P+ +++ ++ I CG H+A ++ G++++WG + G+ GHG ++ + +P+
Sbjct: 302 NVPQPVQALYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPE 361
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP- 179
+ LS+ I VACG +HT A+T +LY +G G N+G G+G + PK + P
Sbjct: 362 KVKYLSSKRIVKVACGGFHTLALTSENELYGFGSG--NYGECGNGEFMDTSKPKLIKFPN 419
Query: 180 ----------------------------LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
E + + G H+ ++T+ G+L++FG GT
Sbjct: 420 DHLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHSLIITNKGRLYSFGYGT 479
Query: 212 ---------------------------------FGVLGHGDRKSVSIPREVESLKGLRTV 238
G LGHGD+ S + V+SL
Sbjct: 480 NGQLGNVVQCAAGWNHSMILTERGDVFSCGYGGHGQLGHGDKDSRTQFTFVQSLGNKNIS 539
Query: 239 RAACGVWHTAAVVEVMV 255
+ G H+ V++ +V
Sbjct: 540 KIFAGGSHSWVVLDSVV 556
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 27/238 (11%)
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++ FG G L G K +PR V +KG+ + HTA + +
Sbjct: 169 VWAFGKNQEGELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQ----------- 217
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVP-TCVAALVEPNFCRVACGHSLTVALTTSGHVYT 322
G++ G G+LG + + V L +V+CG T+ L G VY
Sbjct: 218 -DGQIVVSGSSLHGKLGIESNKTNINKFQIVPTLQRKRAKQVSCGDYHTLVLIEDGTVYQ 276
Query: 323 MGSPVY----GQLGNPQADGK-----LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVY 373
G ++ ++ PQ + +P V+ + V +I CG +H A L ++Y
Sbjct: 277 FGGSLFKDKKDKINRPQNPTQQIAPNVPQPVQALYGREIV-QIDCGDFHSAALDGNGDLY 335
Query: 374 TWGKGA----NGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGV 427
TWG GA G+ GHG + P V+ L K++ +ACG T A+ + G
Sbjct: 336 TWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIVKVACGGFHTLALTSENELYGF 393
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 161/337 (47%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G + ++ P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T +G +Y G N G LG G+ ++ + +S G +A +T
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D+ +V IP EV K + + +CG +H+A V
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG ++ P V + E +VACG TV LT
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VY G +GQ LG + P +E ++ + I+CG H A++T +YT+G
Sbjct: 300 VVYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L V+ IACG
Sbjct: 359 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 142/291 (48%), Gaps = 25/291 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
HT V T G ++ G G LG GD ++ T++ + G +AA+
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 194
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E GKLF WGD +G++G DK +P V V ++CG+ +
Sbjct: 195 E------------DGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHS 240
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+T G +YT G P G+LG P + + P RV G + V ++ACG H VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTE 298
Query: 369 KTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
K VY +G G G+LG G + + P ++E +KD+++ I+CG N TA +
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 31/311 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDA 124
P +++ V+ ACG H + G V++ G + G+LG G D D H +++
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I+ ++ G + A+T G L+ WGD + G +G ++ + +P V G
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEVT---VGKP 229
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAAC 242
+S ISCG +H+A VT G+L+TFG+ G LG + ++ R + + G+ R ++ AC
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 288
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNF 301
G HT + E +V + +G G G+LG G + P + + +
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKI 335
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIA 357
C ++CG + T +T G +YT G +G+LG + N+ L +F V+ IA
Sbjct: 336 CHISCGENHTALMTELGLLYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNFLRFAVQLIA 393
Query: 358 CGSYHVAVLTS 368
CG H+ V +
Sbjct: 394 CGGCHMLVFAT 404
Score = 45.4 bits (106), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S PK +E + +I+CG H AL+ + G ++++G+ G+LG G++ ++ P
Sbjct: 319 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Query: 120 KLIDALSNMNIELVACGEYH 139
L ++L+ACG H
Sbjct: 379 TLCSNFLRFAVQLIACGGCH 398
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 121/215 (56%), Gaps = 15/215 (6%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSD-VLHPKLIDALSNMNIELVAC 135
++ I CG H+ ++K GE+F+WG+ G+LG G D P++++ LS + + ++
Sbjct: 37 NIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISA 96
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G+ H+ A+++SG++Y+WG +FG LG G+ P + LE V ++CG HT
Sbjct: 97 GKSHSMALSVSGNIYSWGRN--DFGQLGLGHTDDKDFPSLIEA-LENQKVEFLACGGSHT 153
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
A++T G +FTFG G +G LGH ++ P V L G R + ACG HT A V +
Sbjct: 154 ALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDL- 212
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVP 290
GK+F++G G++G+LG+G +L+P
Sbjct: 213 ----------GKVFSFGSGEEGQLGNGGTHNQLIP 237
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 122/234 (52%), Gaps = 14/234 (5%)
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLK 233
R L+ ++ I+CG +H+ ++ G+LF +G G LG G S + P+ VE L
Sbjct: 28 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLS 87
Query: 234 GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCV 293
G+ + + G H+ A+ SG +++WG D G+LG G + K P+ +
Sbjct: 88 GVPLAQISAGKSHSMAL------------SVSGNIYSWGRNDFGQLGLGHTDDKDFPSLI 135
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFV 353
AL +ACG S T LT G V+T G+ YGQLG+ +L + KL+ + V
Sbjct: 136 EALENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRV 195
Query: 354 EEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVK 406
++ACG H +A ++ +V+++G G G+LG+G T ++ P ++ ++++K
Sbjct: 196 TQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKLPSNEELK 249
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 116/251 (46%), Gaps = 27/251 (10%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G H +++ G+ F + + + H + L NI + CG+YH+ A+
Sbjct: 4 GAEHMLILSSDGKPFEY------------NYSIEHARFQCILQEKNIIQITCGDYHSLAL 51
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+ G+L+ WG + G LG G ++ L G+ ++ IS G H+ ++ +G
Sbjct: 52 SKGGELFAWGQNLH--GQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGN 109
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++++G FG LG G P +E+L+ + ACG HTA + +
Sbjct: 110 IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTK----------- 158
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTS-GHVYT 322
G +FT+G G G+LGH + +L P V L +VACG T+A + G V++
Sbjct: 159 -DGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLGKVFS 217
Query: 323 MGSPVYGQLGN 333
GS GQLGN
Sbjct: 218 FGSGEEGQLGN 228
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G++F WG+ G LG VG F ++ P+ +E + + I+ G H+ ++
Sbjct: 55 GELFAWGQNL-HGQLG-----VGKIFD---STTAPQIVEHLSGVPLAQISAGKSHSMALS 105
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G ++SWG G+LG G D P LI+AL N +E +ACG HT +T G ++T+
Sbjct: 106 VSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTF 165
Query: 153 GDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGT 211
G G Y G LGH + + P V L G V+ ++CG HT A V+ G++F+FG G
Sbjct: 166 GAGKY--GQLGHNSTQNELRPCLVT-KLAGNRVTQVACGRQHTLAYVSDLGKVFSFGSGE 222
Query: 212 FGVLGHGDRKSVSIP 226
G LG+G + IP
Sbjct: 223 EGQLGNGGTHNQLIP 237
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 15/188 (7%)
Query: 232 LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKLVP 290
L+ ++ CG +H+ A+ G+LF WG G+LG G ++ P
Sbjct: 33 LQEKNIIQITCGDYHSLAL------------SKGGELFAWGQNLHGQLGVGKIFDSTTAP 80
Query: 291 TCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK-LPNRVEGKLS 349
V L +++ G S ++AL+ SG++Y+ G +GQLG D K P+ +E L
Sbjct: 81 QIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEA-LE 139
Query: 350 KSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIA 409
VE +ACG H A+LT V+T+G G G+LGH T + P LV L +V +A
Sbjct: 140 NQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRVTQVA 199
Query: 410 CGTNFTAA 417
CG T A
Sbjct: 200 CGRQHTLA 207
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 81/147 (55%), Gaps = 5/147 (3%)
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
DG + + A+ C+ L E N ++ CG ++AL+ G ++ G ++GQLG
Sbjct: 14 DGKPFEYNYSIEHARF--QCI--LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLG 69
Query: 333 NPQA-DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDR 391
+ D ++ LS + +I+ G H L+ +Y+WG+ G+LG G TDD+
Sbjct: 70 VGKIFDSTTAPQIVEHLSGVPLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDK 129
Query: 392 NSPSLVEALKDKQVKSIACGTNFTAAI 418
+ PSL+EAL++++V+ +ACG + TA +
Sbjct: 130 DFPSLIEALENQKVEFLACGGSHTALL 156
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 138/301 (45%), Gaps = 25/301 (8%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----H 139
G + E+F G G LG G + P+ +D+LS I AC Y H
Sbjct: 40 AGNEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKI---ACLSYGSGPH 96
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T G+++TWG YN LG+G VP ++ L V ++CG +H+ V+T
Sbjct: 97 IVLATTEGEVFTWGHNAYN--QLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLT 154
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNS 258
S G++F +G G +G G + IPR V L+ V ACG + AVV+
Sbjct: 155 SDGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVD------ 208
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
SG+++ WG G+LG G P +AAL RVACG++ T+ LT G
Sbjct: 209 ------SGEVYVWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDG 262
Query: 319 HVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWG 376
VY G+ YGQLG +++ P V + + +E AC S H A T VY WG
Sbjct: 263 QVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWG 321
Query: 377 K 377
+
Sbjct: 322 Q 322
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 51 DEIFVLGTNCCG-CLGLGDIQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 106
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + P I LSN + VACG YH+ +T G+++ WG
Sbjct: 107 FTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--C 164
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V +G+++ +G G LG
Sbjct: 165 NNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLG 224
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + S P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 225 LGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTD------------DGQVYAWGANSY 272
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 273 GQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 131/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 57 GTNCCGCLGLGDIQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYN 115
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G S+P + + L + + ACG +H+ + S G++F WG
Sbjct: 116 QLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 163
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ SG VY G GQL
Sbjct: 164 CNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQL 223
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT +VY WG + G+LG G+ +
Sbjct: 224 GLGSSGNHSTPCRI-AALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSN 282
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 283 QSYPTPVVVEKDRIIEIAACHSTHTSA 309
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 13/223 (5%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T ++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 47 MTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT-- 101
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTT 316
+ G++FTWG +LG+G VP ++ L VACG ++ LT+
Sbjct: 102 ------TEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTS 155
Query: 317 SGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G V+ G GQ+G+ A+ +P RV G L V IACG + EVY W
Sbjct: 156 DGEVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVW 215
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G NG+LG G + + ++P + AL+ +V+ +ACG T +
Sbjct: 216 GYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVL 258
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 11/123 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V++WG G+G LG G + S P + + + VQ +ACG H ++
Sbjct: 210 GEVYVWGY-NGNGQLG---------LGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLT 259
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV-TLSGDLYT 151
G+V++WG S G+LG G S+ +P + + IE+ AC HT A T G +Y
Sbjct: 260 DDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYM 319
Query: 152 WGD 154
WG
Sbjct: 320 WGQ 322
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 146/298 (48%), Gaps = 19/298 (6%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCA 142
G + K EVF G S G LG G +L P+ ID LS I ++ G H
Sbjct: 29 AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVI 88
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
VT G++Y+WG Y+ LG+G+ P +V+ L S++CG H+ V+T G
Sbjct: 89 VTSDGEVYSWGHNAYS--QLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDG 146
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
+++ +G G +G G + IPR+V S L+ + ACG + AVV+
Sbjct: 147 EVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD--------- 197
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G+++ WG G+LG G + P +AAL +V CG++ T+ALT G +Y
Sbjct: 198 ---NGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EVYTWGK 377
G+ YGQLG +++ P +V + VE AC S H + S++ +VY WG+
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQVYMWGQ 311
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T ++F G + G LG GD +S+ PR ++ L G R V + G +V
Sbjct: 36 LTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVT----- 90
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTT 316
S G++++WG +LG+G L P V+ L+ VACG ++ LT
Sbjct: 91 ------SDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTC 144
Query: 317 SGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VY G GQ+G+ A+ +P +V L V IACG + EVY W
Sbjct: 145 DGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAW 204
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G NG+LG G + ++ +P + AL+ +V+ + CG T A+
Sbjct: 205 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT + G LG G+ S P+R++ L G + S+S G H +VTS G+++++G +
Sbjct: 46 GTNSSGCLGTGDAQSILEPRRID-MLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYS 104
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G P +V + L + + ACG H+ + G+++ WG
Sbjct: 105 QLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLT------------CDGEVYAWG 152
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V + ++ +ACG ++A+ +G VY G GQL
Sbjct: 153 YNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQL 212
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L VE++ CG H LT + +Y WG + G+LG G+ +
Sbjct: 213 GLGSSGNQPTPCRI-AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSN 271
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P V K++ V+ AC ++ T+A
Sbjct: 272 QSYPVQVIVDKERIVEIAACHSSHTSA 298
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
G+V+ WG +VGS G + +P+ + S + V IACG + V
Sbjct: 146 GEVYAWGYNNS--------GQVGS--GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAV 195
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEV++WG G+LG G + P I AL + +E V CG HT A+T G +Y
Sbjct: 196 VDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYA 255
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS-AGQLFTFG 208
WG +Y G LG GN+ + P +V E I V +C HT+ S +GQ++ +G
Sbjct: 256 WGANSY--GQLGTGNKSNQSYPVQVIVDKERI-VEIAACHSSHTSAAKSQSGQVYMWG 310
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 82 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHVVLATTEGEV 137
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 138 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 196
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V G+++ +G G LG
Sbjct: 197 -NSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 255
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 256 LGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 303
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 304 GQLGTGNKSNQSYPTPV--IVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 352
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 83 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHVVLATTEGEVFT 139
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 140 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 197
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV+ +G+++
Sbjct: 198 SGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVD------------TGEVYV 245
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P +AAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 246 WGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 305
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 306 LGTGNKSNQSYPTPVIVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 353
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 88 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYS 146
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 147 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 194
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 195 YNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQL 254
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 255 GLGSGGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 313
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 314 QSYPTPVIVEKDRIIEIAACHSAHTSA 340
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + V +
Sbjct: 83 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHVVLAT------- 132
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 133 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 191
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + EVY WG N
Sbjct: 192 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGN 251
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G ++ +P + AL+ +V+ +ACG T +
Sbjct: 252 GQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVL 289
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 82/179 (45%), Gaps = 15/179 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
G+VF WG +VGS G + +P+ + + V NIACG + V
Sbjct: 188 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAV 237
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEV+ WG G+LG G + P I AL + ++ VACG HT +T G +Y
Sbjct: 238 VDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYA 297
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTFGD 209
WG +Y G LG GN+ + P V + I + +C HT A T G ++ +G
Sbjct: 298 WGANSY--GQLGTGNKSNQSYPTPVIVEKDRI-IEIAACHSAHTSAAKTQGGHVYMWGQ 353
>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Papio anubis]
Length = 551
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 143/287 (49%), Gaps = 22/287 (7%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSW 100
D + G N G C G+ + S++ P+ L+S + +++ G G H L +GEVF+W
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTW 123
Query: 101 GEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
G + +LG+G + L P I LSN + VACG YH+ +T G+++ WG N
Sbjct: 124 GHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NS 181
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG G
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
+ P V +L+G+R R ACG HT + + G+++ WG G+L
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQL 289
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G G+K + PT V + + +A HS + A T GHVY G
Sbjct: 290 GTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCA 142
G E+F G G LG G + P+ +D+LS I ++ G H
Sbjct: 54 AGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVL 113
Query: 143 VTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAG 202
T G+++TWG Y+ LG+G VP +++ L V ++CG +H+ V+TS G
Sbjct: 114 ATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDG 171
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
++F +G G +G G + IPR V L+ V ACG AVV+
Sbjct: 172 EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD--------- 222
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
+G+++ WG G+LG G + P VAAL RVACG++ T+ LT G VY
Sbjct: 223 ---TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVY 279
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
G+ YGQLG +++ P V + + +E AC S H A T VY WG+
Sbjct: 280 AWGANSYGQLGTGNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++S+S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P ++ + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGS-----------GPHIVLA 114
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 66 EIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKI---ACLSYGSGPHVVLATTEGEVFT 122
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP +++ L V ++CG +H+ V+TS G++F +G
Sbjct: 123 WGHNAYS--QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV+ +G+++
Sbjct: 181 SGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVD------------TGEVYV 228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 229 WGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 289 LGTGNKSNQSYPTPVVVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 132/266 (49%), Gaps = 27/266 (10%)
Query: 67 PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
P+ L+S L + IAC G H L +GEVF+WG + +LG+G + L P I
Sbjct: 89 PRRLDS---LSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQI 145
Query: 123 DA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
LSN + VACG YH+ +T G+++ WG N G +G G + +P+RV G L+
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGPTANQPIPRRVTGCLQ 203
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V +I+CG + V G+++ +G G LG G + P V +L+G+R R A
Sbjct: 204 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVA 263
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN- 300
CG HT + + G+++ WG G+LG G+K + PT V +VE +
Sbjct: 264 CGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPV--VVEKDR 309
Query: 301 FCRVACGHS--LTVALTTSGHVYTMG 324
+A HS + A T GHVY G
Sbjct: 310 IIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCSGCLGLGDAQSTIEPRRLDS-LSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P ++ + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSGGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSTHTSA 323
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + V +
Sbjct: 66 EIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKI---ACLSYGSGPHVVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ P A+ +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
L+ +R AC V+ A GN + + ++F G G LG GD ++ + P +
Sbjct: 42 LQLIRQAC-VFGNA-------GNEVLYSTVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLD 93
Query: 295 ALVEPNFCRVACGHSLTVAL-TTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSF 352
+L ++ G V L TT G V+T G Y QLGN + G +P ++ LS
Sbjct: 94 SLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQ 153
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE-ALKDKQVKSIACG 411
V E+ACGSYH VLTS EV+ WG +G++G G T ++ P V L++K V +IACG
Sbjct: 154 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACG 213
Query: 412 TNFTAAI 418
+ A+
Sbjct: 214 QMCSMAV 220
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 171 GEVFAWGYNNS--------GQVGS--GPTANQPIPRRVTGCLQNKVVV---NIACGQMCS 217
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P + AL + ++ VACG HT +T G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 278 VYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 334
Query: 208 G 208
G
Sbjct: 335 G 335
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 138/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLATTEGEVFT 122
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 123 WGHNAYS--QLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV+ +G+++
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVD------------AGEVYV 228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL + RVACG++ T+ LT G VY G+ YGQ
Sbjct: 229 WGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 288
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P + + + +E AC S H A T VY WG+
Sbjct: 289 LGTGNKSNQSYPTPISVEKDR-IIEIAACHSTHTSAAKTQGGNVYMWGQ 336
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 25/265 (9%)
Query: 67 PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLI 122
P+ L+S L + IAC G H L +GEVF+WG + +LG+G + L P I
Sbjct: 89 PRRLDS---LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYI 145
Query: 123 DA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
LSN + VACG YH+ +T G+++ WG N G +G G+ + +P+RV G L+
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTANQPIPRRVTGCLQ 203
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
V +I+CG + V AG+++ +G G LG G + P V +L+G+ R A
Sbjct: 204 NKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVA 263
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HT + + G+++ WG G+LG G+K + PT + ++ +
Sbjct: 264 CGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPI-SVEKDRI 310
Query: 302 CRVACGHS--LTVALTTSGHVYTMG 324
+A HS + A T G+VY G
Sbjct: 311 IEIAACHSTHTSAAKTQGGNVYMWG 335
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 131/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRV-AALQGIHVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ + KD+ ++ AC + T+A
Sbjct: 297 QSYPTPISVEKDRIIEIAACHSTHTSA 323
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 13/222 (5%)
Query: 199 TSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNS 258
T ++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 62 TVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT--- 115
Query: 259 SSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTS 317
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+
Sbjct: 116 -----TEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSD 170
Query: 318 GHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
G V+ G GQ+G+ A+ +P RV G L V IACG + EVY WG
Sbjct: 171 GEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWG 230
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
NG+LG G + ++ +P V AL+ V+ +ACG T +
Sbjct: 231 YNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVL 272
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ V+ NIACG +
Sbjct: 171 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKAVV---NIACGQMCS 217
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P + AL ++++ VACG HT +T G
Sbjct: 218 MAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQ 277
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P ++ + I + +C HT A T G ++ +
Sbjct: 278 VYAWGANSY--GQLGTGNKSNQSYPTPISVEKDRI-IEIAACHSTHTSAAKTQGGNVYMW 334
Query: 208 GD 209
G
Sbjct: 335 GQ 336
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 164/359 (45%), Gaps = 50/359 (13%)
Query: 77 DVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACG 136
++ A G RH+ L+ V S G+ S G+LG P+ I AL + ++LV+CG
Sbjct: 24 ELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCG 83
Query: 137 EYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTA 196
+ H+ AV G ++ WG G+ +G E+S + PK++ L I + +SCG +H+
Sbjct: 84 KEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSL 141
Query: 197 VVTSAGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMV 255
++ Q+F++G + G LG G + S + P+ V SL+G+ + A G H+ A+
Sbjct: 142 ALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 196
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV---PTCVAALVEPNFCRVACGHSLTV 312
S C G F WG G+L + + P V AL ++CG + T
Sbjct: 197 -----SLC--GTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTA 249
Query: 313 ALTTSGHVYTMGSPVYGQLG---NPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
LT G V+T G GQLG P+ G +L R++G V +I CGSYH
Sbjct: 250 VLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYH------ 298
Query: 369 KTEVYTWGKGANGRLGHGDTDDRNSPSLVEALK---------------DKQVKSIACGT 412
T Y G GHG +D + P+ EAL D QVK I GT
Sbjct: 299 -TLAYVHTTGQVVSFGHGPSDT-SKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT 355
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 148/298 (49%), Gaps = 31/298 (10%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDV-LHPKLIDA 124
LP+ +++ L V ++CG H+ V +G VF+WG S G+LG G ++ PK I
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV-SHWVPKRVNGPLEGI 183
L+++ I V+CG YH+ A++ +++WG ++ G LG G E S P+RV LEGI
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181
Query: 184 HVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK---SVSIPREVESLKGLRTVRA 240
++ ++ G H+ ++ G F +G + G L R + P V +LK L V
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 300
+CG HTA + + GK+FT+GD G+LG+ K P V ++
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVER-IDGL 288
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
++ CG T+A +V+T G V G+ +D P E L+++F +I+C
Sbjct: 289 VSQIDCGSYHTLA-----YVHTTGQVV--SFGHGPSDTSKPTHPEA-LTENF--DISC 336
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 23/313 (7%)
Query: 111 GVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSH 170
G DS L + + A GE H+ + + + + GD + G LG
Sbjct: 6 GADSRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSR--GQLGRRGAQRG 63
Query: 171 WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSI-PREV 229
+P+ + LE + V +SCG H+ V G++F +G G+ G LG G+ K +S P+++
Sbjct: 64 ELPEPIQA-LETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKI 122
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDK-EAKL 288
+L ++ ++ +CG +H+ A+ + ++F+WG G+LG G + ++
Sbjct: 123 MTLNDIKIIQVSCGHYHSLALSK------------DSQVFSWGKNSHGQLGLGKEFPSQA 170
Query: 289 VPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG----NPQADGKLPNRV 344
P V +L +VA G + + AL+ G + GS GQL N P V
Sbjct: 171 SPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSV 230
Query: 345 EGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQ 404
G L V I+CG H AVLT +V+T+G +G+LG+ T ++ P LVE + D
Sbjct: 231 -GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI-DGL 288
Query: 405 VKSIACGTNFTAA 417
V I CG+ T A
Sbjct: 289 VSQIDCGSYHTLA 301
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 112/222 (50%), Gaps = 13/222 (5%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ +G LG G K S PK + + + + ++CG H+ ++
Sbjct: 94 GRVFAWGAGS-EGQLGIG--------EFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALS 144
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
K +VFSWG+ S G+LG G + P+ + +L + + VA G H+ A++L G +
Sbjct: 145 KDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFG 204
Query: 152 WGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG + L G V P V G L+ + V ISCG HTAV+T G++FTFGD
Sbjct: 205 WGSNSAGQLALSGRNVPVQSNKPLSV-GALKNLGVVYISCGDAHTAVLTQDGKVFTFGDN 263
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
G LG+ P+ VE + GL + + CG +HT A V
Sbjct: 264 RSGQLGYSPTPEKRGPQLVERIDGLVS-QIDCGSYHTLAYVH 304
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 23/245 (9%)
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
G + + G H+ ++ + ++ + GD + G LG + +P +++L+ L +
Sbjct: 22 GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD-KEAKLVPTCVAALVEPN 300
CG H+ AV C G++F WG G +G+LG G+ KE P + L +
Sbjct: 82 CGKEHSLAV------------CHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIK 129
Query: 301 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEI 356
+V+CGH ++AL+ V++ G +GQLG + + P++ + +S + ++
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGK---EFPSQASPQRVRSLEGIPLAQV 186
Query: 357 ACGSYHVAVLTSKTEVYTWGKGANGRL---GHGDTDDRNSPSLVEALKDKQVKSIACGTN 413
A G H L+ + WG + G+L G N P V ALK+ V I+CG
Sbjct: 187 AAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDA 246
Query: 414 FTAAI 418
TA +
Sbjct: 247 HTAVL 251
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G F WG + + G N V + S+ P ++ + L V I+CG H A++
Sbjct: 200 GTSFGWGSNSAGQLALSGRN-------VPVQSNKPLSVGALKNLGVVYISCGDAHTAVLT 252
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYT 151
+ G+VF++G+ G+LG+ + P+L++ + + + + CG YHT A V +G + +
Sbjct: 253 QDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHTLAYVHTTGQVVS 311
Query: 152 WGDG 155
+G G
Sbjct: 312 FGHG 315
>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium clariflavum DSM 19732]
Length = 819
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 192/463 (41%), Gaps = 87/463 (18%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G V+ WG+ +G+LG G +DS +P + DV+ I+CG H A++
Sbjct: 379 GTVWTWGKNI-NGILG---------LGTALDSQIPSVVSGTG--DVEVISCGKTHMAIIK 426
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G +++WG G+LG+G + P I+ +S NI ++CG H A+ + L+ W
Sbjct: 427 SDGTLWTWGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAW 484
Query: 153 GDGTY-----NFGLLGHGNEVSHWVPKRVNGP---------------------------- 179
G+ Y + GL + +P V
Sbjct: 485 GNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAK 544
Query: 180 ---------------LEGIH-VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--- 220
+EG+ V+ +S G H + G +++ G+ +G LG G +
Sbjct: 545 NTVAGDEQSVYLPYKIEGLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHH 604
Query: 221 KSVSIPREVESLKGLRTVRA-ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
S S + KGL + A A G H+ A+ + G ++TWG G L
Sbjct: 605 NSYSETFNLTKAKGLTNIVAVAAGSEHSVAL------------KNDGTVWTWGSNQFGEL 652
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DG 338
HG+ L P L N C ++ G++ +AL G V+ G YGQLGN
Sbjct: 653 AHGNDTFSLEPMQAEGL--ENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKT 710
Query: 339 KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVE 398
+P +V+G + + +I G +T +V+ WGK G+LG G T +R +P ++
Sbjct: 711 NVPVQVDGLEN---IVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKID 767
Query: 399 ALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNN 441
A K KSI G +FT + V GV ++ L F++
Sbjct: 768 AF--KGCKSIVSGMDFTMVLMNDGTVIGVGSNVSGVMTLGFSD 808
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 166/360 (46%), Gaps = 35/360 (9%)
Query: 66 LPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
+PK +E + DV +A G RH+ + K G V++WG G+LG +S++ +
Sbjct: 152 IPKKIEG--LEDVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGD--ESNIRRNTPVQVK 207
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVNGPLEGIH 184
++ + G++ + A+ G ++ WG YN+ G +G G ++ VP + G +
Sbjct: 208 GLTGVKDIDAGDFFSVALRDDGTVWGWG---YNYKGQIGCGTGINSNVPLQTVGVS---N 261
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKS-VSIPREVESLKGLRTVRAACG 243
++ IS G H + ++ +G G G LG+G S + IP ++ S +++V+A
Sbjct: 262 ITQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVKSVKAGTM 321
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
V +AA+ E G L+ WGD G +G+ + + V
Sbjct: 322 V--SAAIKE------------DGTLWIWGDNTYGIMGN---SRNINSSPVQRKDISGIKA 364
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGNPQA-DGKLPNRVEGKLSKSFVEEIACGSYH 362
V AL G V+T G + G LG A D ++P+ V G VE I+CG H
Sbjct: 365 VELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSG---TGDVEVISCGKTH 421
Query: 363 VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAICLHK 422
+A++ S ++TWG G+LG+G+ D P + + + + I+CG AI +K
Sbjct: 422 MAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGISN--ISKISCGGKHVLAIDENK 479
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 161/360 (44%), Gaps = 36/360 (10%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH-PK 120
M + PK V +ACG H + K G V++WG S G+LG G ++ PK
Sbjct: 99 MITEFPKKSMEGFV----QVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPK 154
Query: 121 LIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYN-FGLLGHGNEVSHWVPKRVNGP 179
I+ L ++ VA G H+ A+ G ++ WG YN +G LG + + P +V G
Sbjct: 155 KIEGLE--DVIKVAAGSRHSLALKKDGTVWAWG---YNYYGQLGDESNIRRNTPVQVKG- 208
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L G V I G + + + G ++ +G G +G G + ++P + + + +
Sbjct: 209 LTG--VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQIS 266
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVE 298
A G H A+ + ++ WG GDKG+LG+G + L +P +++ E
Sbjct: 267 A--GDEHVLALDK------------DKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTE 312
Query: 299 PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIAC 358
V G ++ A+ G ++ G YG +GN + P + + S ++ +
Sbjct: 313 VK--SVKAGTMVSAAIKEDGTLWIWGDNTYGIMGNSRNINSSPVQ---RKDISGIKAVEL 367
Query: 359 GSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
Y A L + V+TWGK NG LG G D PS+V D +V I+CG A I
Sbjct: 368 NQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGTGDVEV--ISCGKTHMAII 425
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 136 EIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKI---ACFSYGSGPHVILATTEGEIFT 192
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 193 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 250
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV+ +G+++
Sbjct: 251 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVD------------NGEVYV 298
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P +AAL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 299 WGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQ 358
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 359 LGTGNKSNQSYPTPVAVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 406
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 144/290 (49%), Gaps = 28/290 (9%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GE+
Sbjct: 135 DEIFVLGTNCCG-CLGLGDIQSTIEPRRLDS---LSGKKIACFSYGSGPHVILATTEGEI 190
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 191 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN- 249
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V G+++ +G G LG
Sbjct: 250 -NSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLG 308
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + S P + +L+G+ R ACG HT + + G+++ WG
Sbjct: 309 LGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTD------------EGQVYVWGANSY 356
Query: 277 GRLGHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V A+ + +A HS + A T GHVY G
Sbjct: 357 GQLGTGNKSNQSYPTPV-AVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ S G H + T+ G++FT+G +
Sbjct: 141 GTNCCGCLGLGDIQSTIEPRRLDS-LSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYS 199
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 200 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 247
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +VA+ +G VY G GQL
Sbjct: 248 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQL 307
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 308 GLGSSGNQSTPCRI-AALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSN 366
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 367 QSYPTPVAVEKDRIIEIAACHSTHTSA 393
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + V +
Sbjct: 136 EIFVLGTNCCGCLGLGDIQSTIEPRRLDSLSGKKI---ACFSYGSGPHVILAT------- 185
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 186 -TEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 244
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + EVY WG N
Sbjct: 245 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGN 304
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++++P + AL+ V+ +ACG T +
Sbjct: 305 GQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVL 342
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 241 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKVVV---NIACGQMCS 287
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P I AL + ++ VACG HT +T G
Sbjct: 288 VAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQ 347
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 348 VYVWGANSY--GQLGTGNKSNQSYPTPVAVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 404
Query: 208 GD 209
G
Sbjct: 405 GQ 406
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 179/410 (43%), Gaps = 59/410 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
V WG G DG LG G + + + + L V + G R++ +
Sbjct: 13 VLAWGSGE-DGQLG---------MGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICAD 62
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F+WG G LGH ++ P +DAL+ ++I A G +H AV G Y WG
Sbjct: 63 GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122
Query: 154 DGTYNFGLLGHGNEVSH----------WVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
Y G G E +P+R L+ V ++ G H+ V+T G
Sbjct: 123 GNEY--GQCGEEAERKEDGTRALRRDIPIPQRCAPKLK---VRQVAAGGTHSVVLTQDGH 177
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G GD K +S P V+ L+ ++ + A G +H A+ E
Sbjct: 178 VWTWGQ----PWPPGDIKQISTPVRVQGLENVKVI--AVGAFHNLALTE----------- 220
Query: 264 SSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTM 323
G L+ WG+ + G+LG GD + + P V L + + +A G + ALT G VY
Sbjct: 221 -DGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAW 279
Query: 324 GSPVYGQLG--NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANG 381
G +G+LG + ++ +P +VE L+ + +++CG H LT ++++G+G +G
Sbjct: 280 GRGEHGRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHG 338
Query: 382 RLGHGDTDDRNSPSLV------------EALKDKQVKSIACGTNFTAAIC 419
RLG+G P V ++ Q + +ACG T AI
Sbjct: 339 RLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 155/339 (45%), Gaps = 48/339 (14%)
Query: 5 AMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDS 64
A+DA VS A S +S D G +F WG +G K +S
Sbjct: 40 ALDALAVSAVVAGSRNSLAICAD-----GRLFTWGWNQ--------RGTLGHPPETKTES 86
Query: 65 SLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDS---------- 114
S P +++ + + A GG H V+ +G ++WG G+ G +
Sbjct: 87 S-PAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRR 145
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D+ P+ + + VA G H+ +T G ++TWG + G + ++S P
Sbjct: 146 DIPIPQ--RCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQ-PWPPGDI---KQIS--TPV 197
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
RV G LE + V I+ G +H +T G L+ +G+ +G LG GD + S P VE L
Sbjct: 198 RVQG-LENVKV--IAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSD 254
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG-DKEAKLVPTCV 293
L V A G WH+ A+ + G+++ WG G+ GRLG G DK + +VP V
Sbjct: 255 LSLVDIAAGGWHSTALTK------------EGEVYAWGRGEHGRLGFGDDKSSHMVPQKV 302
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
L + +V+CG + +VALT G +++ G +G+LG
Sbjct: 303 ELLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLG 341
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 135/293 (46%), Gaps = 44/293 (15%)
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
A +L + WG G G LG G E W R L+ + VS++ G ++ + +
Sbjct: 6 AFSLPTAVLAWGSG--EDGQLGMGGYEEEDWA--RGVAALDALAVSAVVAGSRNSLAICA 61
Query: 201 AGQLFTFGDGTFGVLGHG-DRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+LFT+G G LGH + K+ S P V++L G+ V+AA G WH AV +
Sbjct: 62 DGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDD------- 114
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVE----PNFC-------RVACGH 308
G+ + WG + G+ G +EA+ AL P C +VA G
Sbjct: 115 -----KGRAYAWGGNEYGQCG---EEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGG 166
Query: 309 SLTVALTTSGHVYTMGSPVYGQLGNPQADGK---LPNRVEGKLSKSFVEEIACGSYHVAV 365
+ +V LT GHV+T G P P D K P RV+G + V+ IA G++H
Sbjct: 167 THSVVLTQDGHVWTWGQPW------PPGDIKQISTPVRVQGLEN---VKVIAVGAFHNLA 217
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT ++ WG G+LG GDT R+ P VE L D + IA G + A+
Sbjct: 218 LTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTAL 270
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G + K +P+ +E D+ ++CGG H+ +
Sbjct: 274 GEVYAWGRGE-HGRLGFGDD--------KSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLI------------DALSNMNIELVACGEYHT 140
+ G +FS+G GRLG+G HP + D+ VACG HT
Sbjct: 325 RDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHT 384
Query: 141 CAV 143
A+
Sbjct: 385 LAI 387
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 30/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + +AC G H L +GEV
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LTGKKVACLSYGSGPHVVLATSEGEV 120
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYN- 179
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V G+++ +G G LG
Sbjct: 180 -NSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLG 238
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P V +L+G+R RAACG HT + + G+++ WG
Sbjct: 239 LGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTD------------EGQVYVWGANSY 286
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT + +VE + +A HS + A T GHVY G
Sbjct: 287 GQLGTGNKSNQPYPTPI--IVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 134/289 (46%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+L+ VAC Y H T G+++T
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKK---VACLSYGSGPHVVLATSEGEVFT 122
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G
Sbjct: 123 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV+ +G+++
Sbjct: 181 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVD------------TGEVYV 228
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P VAAL R ACG++ T+ LT G VY G+ YGQ
Sbjct: 229 WGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQ 288
Query: 331 LGNPQADGKLPNRVEGKLSKSFVEEI-ACGSYHV-AVLTSKTEVYTWGK 377
LG + P + K + EI AC S H A T VY WG+
Sbjct: 289 LGTGNKSNQ-PYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G V+ +S G H + TS G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L R + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGGSGNQPTPCRV-AALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
+ P+ + KD+ ++ AC + T+A
Sbjct: 297 QPYPTPIIVEKDRIIEIAACHSTHTSA 323
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 104/218 (47%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + V +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTG---KKVACLSYGSGPHVVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
S G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -SEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ ACG T +
Sbjct: 235 GQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVL 272
>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
Length = 821
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 171/364 (46%), Gaps = 70/364 (19%)
Query: 65 SLPKALESAVVLDVQNIACGGRHA-ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLID 123
++ KALE+ + ++CG H+ A N+ G V+ WG GRLG+ + V P++++
Sbjct: 152 TIVKALENQ---KIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEPQVLE 208
Query: 124 ALS-----NMNIELVACGEYHTCAV----------TLSGDLYTWGDG-TYNFGL------ 161
L M + ++CGE HT A+ T L+ WG+ G+
Sbjct: 209 CLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADG 268
Query: 162 ----LGHGNEVSHWVP--------------KRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+ E+S VP K + L G+H S +++A +TS G
Sbjct: 269 NNEDMQSAREIS--VPHQLDPDPFQHDTDNKNYSNQLIGVHASY-----YYSAALTSNGN 321
Query: 204 LFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNC 263
++T+G G FG LG+ D K P+ ++ L G + R + G +H AA+ E
Sbjct: 322 VYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITE----------- 370
Query: 264 SSGKLFTWGDGDKGRLGHGD--KEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
G++F+WG G G+LGHG E ++ P V+AL + ++CG S T+ALT G VY
Sbjct: 371 -QGQVFSWGRGINGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLALTNKGEVY 427
Query: 322 TMGSPVYGQLGNPQ-ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
+ G GQLG+ LP +V + + +I+ G H + LT +++TWG
Sbjct: 428 SWGGGQLGQLGHGDFLRQSLPIKVANL--EDNIAQISAGKRHSSALTDDGKLFTWGSNEY 485
Query: 381 GRLG 384
G+LG
Sbjct: 486 GQLG 489
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 160/339 (47%), Gaps = 40/339 (11%)
Query: 119 PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHG------NEVSHWV 172
P+ + AL NI V CG T +T S + + + G+ LGH N VS
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 173 PKRVNGP-----LEGIHVSSISCGPWHT-AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIP 226
+ V P LE + +SCG H+ A +G ++ +G G G LG+ + V P
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEP 204
Query: 227 REVESLK-----GLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG- 280
+ +E LK ++ ++ +CG HT A++++ N + S KLF WG+ DK +LG
Sbjct: 205 QVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGET--SQNKLFVWGNNDKLQLGM 262
Query: 281 ----HGDKE--AKLVPTCVAALVEPN--------------FCRVACGHSLTVALTTSGHV 320
G+ E V ++P+ V + + ALT++G+V
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
YT GS +G+LG + +V +L+ V I+ G YH A +T + +V++WG+G N
Sbjct: 323 YTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWGRGIN 382
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G+LGHG + + V AL++ + I+CG + T A+
Sbjct: 383 GQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALT 421
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 153/333 (45%), Gaps = 56/333 (16%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESA--VVLDVQNIACGGRHA-A 89
G V+ WG G +G LG GV + + + L+ A + + V I+CG H A
Sbjct: 180 GLVYGWGLGL-NGRLGN------ENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLA 232
Query: 90 LVN---------KQGEVFSWGEESGGRLG---------------------HGVDSDVLHP 119
L+ Q ++F WG +LG H +D D
Sbjct: 233 LIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQH 292
Query: 120 KLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGP 179
+ + + V Y++ A+T +G++YTWG G FG LG+ + PK V
Sbjct: 293 DTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSGE--FGRLGYMDIKKQPQPK-VLKE 349
Query: 180 LEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVR 239
L G V+ IS G +H A +T GQ+F++G G G LGHG + R V +L+ + +
Sbjct: 350 LTGFQVTRISLGYYHGAAITEQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIID 409
Query: 240 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 299
+CG HT A+ + G++++WG G G+LGHGD + +P VA L E
Sbjct: 410 ISCGESHTLAL------------TNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANL-ED 456
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
N +++ G + ALT G ++T GS YGQLG
Sbjct: 457 NIAQISAGKRHSSALTDDGKLFTWGSNEYGQLG 489
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 176/404 (43%), Gaps = 67/404 (16%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGE--VFSWGEESGGRLGHGVDSD--------- 115
P+ + + ++ + CG + K E VFSWG +LGH
Sbjct: 85 PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144
Query: 116 ---VLHPKLIDALSNMNIELVACGEYHTCA-VTLSGDLYTWGDGTYNFGLLGHGNEVSHW 171
V P ++ AL N I+ ++CG H+ A SG +Y WG G G LG+ NE
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLN--GRLGNENEGVVQ 202
Query: 172 VPK-----RVNGPLEGIHVSSISCGPWHTAVV----------TSAGQLFTFGDGTFGVLG 216
P+ ++ ++ + V ISCG HT + TS +LF +G+ LG
Sbjct: 203 EPQVLECLKIAMEIK-MKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLG 261
Query: 217 HGDR-----------KSVSIPREVE----------SLKGLRTVRAACGVWHTAAVVEVMV 255
++ + +S+P +++ + + +++AA+
Sbjct: 262 MDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAAL----- 316
Query: 256 GNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALT 315
S+G ++TWG G+ GRLG+ D + + P + L R++ G+ A+T
Sbjct: 317 -------TSNGNVYTWGSGEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAIT 369
Query: 316 TSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G V++ G + GQLG+ + R L + +I+CG H LT+K EVY+W
Sbjct: 370 EQGQVFSWGRGINGQLGHGSVLNEDQVRPVSALQNIHIIDISCGESHTLALTNKGEVYSW 429
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
G G G+LGHGD ++ P V L+D + I+ G ++A+
Sbjct: 430 GGGQLGQLGHGDFLRQSLPIKVANLEDN-IAQISAGKRHSSALT 472
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 167/346 (48%), Gaps = 31/346 (8%)
Query: 82 ACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTC 141
ACG RH+ L+ G V+S G S G+LG P I AL +I V+CG+ H+
Sbjct: 43 ACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSL 102
Query: 142 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 201
A+ G +++WG G+ + ++S +PK+++ L + +SCG +H+ +
Sbjct: 103 AICKEGRVFSWGSGSDGQLGIREFKKLSS-IPKKID-ELSSFKIIQVSCGHYHSIALAQD 160
Query: 202 GQLFTFGDGTFGVLGHGDR-KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G++F++G G LG G+ S + P+ V+SL G+ + A G H+ A+
Sbjct: 161 GRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL---------- 210
Query: 261 SNCSSGKLFTWGDGDKGRLG-HGDKE-AKLV--PTCVAALVEPNFCRVACGHSLTVALTT 316
SG + WG + G+L G KE A+ + P + L ++CG T LT
Sbjct: 211 --SFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQ 268
Query: 317 SGHVYTMGSPVYGQLGNPQADG-KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKT-EVYT 374
G V+T GS GQLG G K P V+ +S S +IACGSYH + T +V +
Sbjct: 269 DGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVSFS---QIACGSYHTLAYSCTTGQVIS 325
Query: 375 WGKGAN----GRLGHGD-TDDRNSPSLVEA--LKDKQVKSIACGTN 413
+G G+ G L GD + N +L+ + D QVK I G N
Sbjct: 326 FGCGSQRDPIGPLQPGDAVQNFNISNLISSNDFTDFQVKDIFAGAN 371
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 159/330 (48%), Gaps = 27/330 (8%)
Query: 98 FSWGEESGGRLG----HGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
+ WG+ S G+LG + + + +L N + ACGE H+ + L D W
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHS--LLLLSDGTVWS 60
Query: 154 DGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFG 213
G + G LG H P ++ LE + S+SCG H+ + G++F++G G+ G
Sbjct: 61 CGNNSCGQLGRKRCQKHGRPAQIQA-LETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG 119
Query: 214 VLGHGDRKSVS-IPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG + K +S IP++++ L + ++ +CG +H+ A+ + G++F+WG
Sbjct: 120 QLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQ------------DGRVFSWG 167
Query: 273 DGDKGRLGHGDK-EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G+LG G+ ++ P V +L +VA G + + AL+ SG Y G GQL
Sbjct: 168 KNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQL 227
Query: 332 ---GNPQADGKLPNRVE-GKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGD 387
G ++ ++ G+L + V I+CG H AVLT +V+T+G +G+LG
Sbjct: 228 ALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQL 287
Query: 388 TDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
P +V++ IACG+ T A
Sbjct: 288 ISGMKGPQVVDSAVS--FSQIACGSYHTLA 315
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 129/264 (48%), Gaps = 22/264 (8%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLH-PKLIDAL 125
P +++ D+ +++CG H+ + K+G VFSWG S G+LG + PK ID L
Sbjct: 80 PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL 139
Query: 126 SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHV 185
S+ I V+CG YH+ A+ G +++WG N G LG G V + L+GI +
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKN--NHGQLGLGENVPSQASPQWVKSLDGIPL 197
Query: 186 SSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK----SVSIPREVESLKGLRTVRAA 241
+ ++ G H+ ++ +G + +G G L +K +S P + LK L+ +
Sbjct: 198 AQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYIS 257
Query: 242 CGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNF 301
CG HTA + + GK+FT+G D G+LG P V + V +F
Sbjct: 258 CGDEHTAVLTQ------------DGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAV--SF 303
Query: 302 CRVACGHSLTVALT-TSGHVYTMG 324
++ACG T+A + T+G V + G
Sbjct: 304 SQIACGSYHTLAYSCTTGQVISFG 327
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 28/257 (10%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G VF WG G+ DG LG K SS+PK ++ + ++CG H+ +
Sbjct: 108 GRVFSWGSGS-DGQLG--------IREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALA 158
Query: 93 KQGEVFSWGEESGGRLGHGVD-SDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
+ G VFSWG+ + G+LG G + P+ + +L + + VA G H+ A++ SG Y
Sbjct: 159 QDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYG 218
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVN-GPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
WG L E + + K + G L+ + V+ ISCG HTAV+T G++FTFG
Sbjct: 219 WGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSN 278
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G LG + P+ V+S + ACG +HT A +C++G++ +
Sbjct: 279 DSGQLGRQLISGMKGPQVVDSAVSFSQI--ACGSYHTLAY-----------SCTTGQVIS 325
Query: 271 WGDGDK----GRLGHGD 283
+G G + G L GD
Sbjct: 326 FGCGSQRDPIGPLQPGD 342
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 321 YTMGSPVYGQLGNPQADGKLPNRVEGK----LSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
Y G GQLG P V + L + + ACG H +L S V++ G
Sbjct: 3 YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCG 62
Query: 377 KGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC----LHKWVSGVD 428
+ G+LG P+ ++AL+ + + S++CG + AIC + W SG D
Sbjct: 63 NNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSD 118
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 152/316 (48%), Gaps = 22/316 (6%)
Query: 69 ALESAVVLDVQNIAC---GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDAL 125
AL VL AC G + K EVF G S G LG G ++ P+ ID L
Sbjct: 11 ALCPQEVLKFIQQACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDML 70
Query: 126 SNMNIELVACGE-YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
S I ++ G H VT G++Y+WG Y+ LG+G+ P +V+ L
Sbjct: 71 SGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYS--QLGNGSTNQALSPCQVSTNLINKK 128
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVES-LKGLRTVRAACG 243
S++CG H+ V+T G+++ +G G +G G + IPR+V S L+ + ACG
Sbjct: 129 AHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACG 188
Query: 244 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR 303
+ AVV+ +G+++ WG G+LG G + P +AAL +
Sbjct: 189 QMSSMAVVD------------NGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQ 236
Query: 304 VACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYH 362
V CG++ T+ALT G +Y G+ YGQLG +++ P +V + VE AC S H
Sbjct: 237 VVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSH 295
Query: 363 VAVLTSKT-EVYTWGK 377
+ S++ +VY WG+
Sbjct: 296 TSAAKSQSGQVYMWGQ 311
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 13/223 (5%)
Query: 198 VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGN 257
+T ++F G + G LG GD +S+ PR ++ L G R V + G +V
Sbjct: 36 ITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVT----- 90
Query: 258 SSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTT 316
S G++++WG +LG+G L P V+ L+ VACG ++ LT
Sbjct: 91 ------SDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLTC 144
Query: 317 SGHVYTMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
G VY G GQ+G+ A+ +P +V L V IACG + EVY W
Sbjct: 145 DGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAW 204
Query: 376 GKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G NG+LG G + ++ +P + AL+ +V+ + CG T A+
Sbjct: 205 GYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT + G LG G+ S P+R++ L G + S+S G H +VTS G+++++G +
Sbjct: 46 GTNSSGCLGTGDAQSIIEPRRID-MLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYS 104
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G P +V + L + ACG H+ + G+++ WG
Sbjct: 105 QLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLT------------CDGEVYAWG 152
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVE-PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V + ++ +ACG ++A+ +G VY G GQL
Sbjct: 153 YNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQL 212
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L VE++ CG H LT + +Y WG + G+LG G+ +
Sbjct: 213 GLGSSGNQPTPCRI-AALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSN 271
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P V K++ V+ AC ++ T+A
Sbjct: 272 QSYPVQVIVDKERIVEIAACHSSHTSA 298
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 15/179 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVV-LDVQNIACGGRHAALV 91
G+V+ WG +VGS G + +P+ + S + V IACG + V
Sbjct: 146 GEVYAWGYNNS--------GQVGS--GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAV 195
Query: 92 NKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYT 151
GEV++WG G+LG G + P I AL + +E V CG HT A+T G +Y
Sbjct: 196 VDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYA 255
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS-AGQLFTFGD 209
WG +Y G LG GN+ + P +V E I V +C HT+ S +GQ++ +G
Sbjct: 256 WGANSY--GQLGTGNKSNQSYPVQVIVDKERI-VEIAACHSSHTSAAKSQSGQVYMWGQ 311
>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Macaca mulatta]
Length = 519
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 143/288 (49%), Gaps = 22/288 (7%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSW 100
D + G N G C G+ + S++ P+ L+S + +++ G G H L +GEVF+W
Sbjct: 65 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTW 123
Query: 101 GEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 159
G + +LG+G + L P I LSN + VACG YH+ +T G+++ WG N
Sbjct: 124 GHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NS 181
Query: 160 GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGD 219
G +G G+ V+ +P+RV G L+ V +I+CG V G+++ +G G LG G
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGS 241
Query: 220 RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRL 279
+ P V +L+G+R R ACG HT + + G+++ WG G+L
Sbjct: 242 SGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQL 289
Query: 280 GHGDKEAKLVPTCVAALVEPNFCRVACGHS--LTVALTTSGHVYTMGS 325
G G+K + PT V + + +A HS + A T GHVY G
Sbjct: 290 GTGNKSNQSYPTPV-TVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 137/286 (47%), Gaps = 19/286 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCAVTLSGDLYTWGD 154
E+F G G LG G + P+ +D+LS I ++ G H T G+++TWG
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGH 125
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y+ LG+G VP +++ L V ++CG +H+ V+TS G++F +G G
Sbjct: 126 NAYS--QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 215 LGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G G + IPR V L+ V ACG AVV+ +G+++ WG
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYVWGY 231
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G+LG G + P VAAL RVACG++ T+ LT G VY G+ YGQLG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
+++ P V + + +E AC S H A T VY WG+
Sbjct: 292 GNKSNQSYPTPVTVEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++S+S G H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYS 129
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P ++ + L + + ACG +H+ + S G++F WG
Sbjct: 130 QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 177
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG +A+ +G VY G GQL
Sbjct: 178 YNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQL 237
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 238 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 297 QSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGS-----------GPHIVLA 114
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 145/292 (49%), Gaps = 32/292 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D + G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 41 DEIFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN + VACG YH+ +T G+++ WG
Sbjct: 97 FTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV G L+ V +I+CG + V + G+++ +G G LG
Sbjct: 156 -NSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 262
Query: 277 GRLGHGDKEAKLVPTCVAA----LVEPNFCRVACGHSLTVALTTSGHVYTMG 324
G+LG G+K + P V ++E C +A H+ + A T GHVY G
Sbjct: 263 GQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLA--HT-SAAKTQGGHVYMWG 311
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 25/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
E+F G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G +P ++ L V+ ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V L+ V ACG + AVV ++G+++
Sbjct: 157 SGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVV------------NTGEVYV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P ++AL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 264
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC H A T VY WG+
Sbjct: 265 LGTGNKSNQSYPAPVVVEKDR-IIEIAACHLAHTSAAKTQGGHVYMWGQ 312
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 129/267 (48%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGSSGNQPTPCRISA-LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC T+A
Sbjct: 273 QSYPAPVVVEKDRIIEIAACHLAHTSA 299
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + AC + + + +
Sbjct: 42 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLAT------- 91
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G L+P ++ L VACG ++ LT+ G V+
Sbjct: 92 -TEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + + EVY WG N
Sbjct: 151 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P + AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVL 248
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 147 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKVVV---NIACGQMCS 193
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P I AL + ++ VACG HT +T G
Sbjct: 194 MAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 254 VYAWGANSY--GQLGTGNKSNQSYPAPVVVEKDRI-IEIAACHLAHTSAAKTQGGHVYMW 310
Query: 208 GD 209
G
Sbjct: 311 GQ 312
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 161/337 (47%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G + ++ P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T +G +Y G N G LG G+ ++ + +S G +A +T
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D+ +V IP EV K + + +CG +H+A V
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG ++ P V + E +VACG TV LT
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VY G +GQ LG + P +E ++ + I+CG H A++T +YT+G
Sbjct: 300 VVYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L V+ IACG
Sbjct: 359 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSN--NWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
HT V T G ++ G G LG GD ++ T++ + G +AA+
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 194
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E GKLF WGD +G++G DK +P V V ++CG+ +
Sbjct: 195 E------------DGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHS 240
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+T G +YT G P G+LG P + + P RV G + V ++ACG H VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTE 298
Query: 369 KTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
K VY +G G G+LG G + + P ++E +KD+++ I+CG N TA +
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 31/311 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDA 124
P +++ V+ ACG H + G V++ G + G+LG G D D H +++
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I+ ++ G + A+T G L+ WGD + G +G ++ + +P V G
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEVT---VGKP 229
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAAC 242
+S ISCG +H+A VT G+L+TFG+ G LG + ++ R + + G+ R ++ AC
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 288
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNF 301
G HT + E +V + +G G G+LG G + P + + +
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKI 335
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIA 357
C ++CG + T +T G +YT G +G+LG + N+ L +F V+ IA
Sbjct: 336 CHISCGENHTALMTELGLLYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNFLRFAVQLIA 393
Query: 358 CGSYHVAVLTS 368
CG H+ V +
Sbjct: 394 CGGCHMLVFAT 404
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S PK +E + +I+CG H AL+ + G ++++G+ G+LG G++ ++ P
Sbjct: 319 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Query: 120 KLIDALSNMNIELVACGEYH 139
L ++L+ACG H
Sbjct: 379 TLCSNFLRFAVQLIACGGCH 398
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 145/302 (48%), Gaps = 25/302 (8%)
Query: 128 MNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK--------RVNGP 179
MN+ VA G HT +T GD+Y+ G L N +S ++
Sbjct: 1 MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60
Query: 180 LEGIHVSSI--SCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRT 237
L G ++ I S G H +T+ G++F+FG G LGHGD+ S++ P++VE+L
Sbjct: 61 LRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFV 120
Query: 238 VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALV 297
C +HT S ++++ G D G+LG G+ + K PT + AL
Sbjct: 121 TAVGCSYYHTIF-----------SCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALN 169
Query: 298 EPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSFVEEIA 357
+ CG +V + G +++ G GQLG +DG + E K KS +IA
Sbjct: 170 GKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS--TQIA 227
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTA 416
CG YH V + ++Y+WGK +G+LG G + P+LV L+D+++ S+ACG T
Sbjct: 228 CGYYH-TVAINNGQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTL 286
Query: 417 AI 418
A+
Sbjct: 287 AL 288
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 174/363 (47%), Gaps = 41/363 (11%)
Query: 76 LDVQNIACGGRHAALVNKQGEVFSWG-EESGGRLGHGVD----------SDVLHPKLIDA 124
++V +A G H ++ G+V+S G E G L G + + KL++
Sbjct: 1 MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60
Query: 125 LSNMNIELVAC--GEYHTCAVTLSGDLYTWGDGTYNF-GLLGHGNEVSHWVPKRVNGPLE 181
L NI + G H A+T +G ++++G +N G LGHG++ S PK+V L
Sbjct: 61 LRGKNIVKIFASNGCEHVIALTNNGKVFSFG---FNVKGQLGHGDQTSINSPKQVEA-LS 116
Query: 182 GIHVSSISCGPWHTAV-VTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA 240
V+++ C +HT ++++ G +G LG G+ + P +E+L G R V
Sbjct: 117 RKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSI 176
Query: 241 ACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEP 299
CG +H+ + G++F++G D G+LG + + +P V L
Sbjct: 177 GCGQYHSVV------------SSIDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKST 224
Query: 300 NFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGK--LPNRVEGKLSKSFVEEIA 357
++ACG+ TVA+ +G +Y+ G GQLG K LP V L + +A
Sbjct: 225 ---QIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVR-DLEDQEIVSVA 279
Query: 358 CGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAA 417
CG YH L +++++G+ ++G+LG G T++ P L++ L DK+V IA G F +
Sbjct: 280 CGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG--FYHS 337
Query: 418 ICL 420
I L
Sbjct: 338 IVL 340
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 162/377 (42%), Gaps = 73/377 (19%)
Query: 84 GGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV 143
G H + G+VFS+G G+LGHG + + PK ++ALS + V C YHT
Sbjct: 74 GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHT-IF 132
Query: 144 TLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQ 203
+ + ++ + G ++G LG GN P + L G + SI CG +H+ V + G+
Sbjct: 133 SCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEA-LNGKRIVSIGCGQYHSVVSSIDGE 191
Query: 204 LFTFGDGTFGVLG-HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVV----------- 251
+F+FG G LG G ++S+P+EV K L++ + ACG +HT A+
Sbjct: 192 IFSFGRNDSGQLGITGSDGNISLPKEV---KNLKSTQIACGYYHTVAINNGQLYSWGKND 248
Query: 252 --EVMVGNSSSSNC---------------------------SSGKLFTWGDGDKGRLGHG 282
++ +G S+ +G+LF++G G+LG G
Sbjct: 249 SGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDG 308
Query: 283 DKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPV---YGQLGNPQADGK 339
P + L++ C++A G ++ L + +P+ + QL N Q
Sbjct: 309 TTNNSCKPLLIQGLIDKKVCQIAAGFYHSIVLANP----VIRNPLVEDFKQLLNNQELSD 364
Query: 340 LPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG--------DTDDR 391
+ VEGK K + H +L ++ E + NG + DT +
Sbjct: 365 VTFIVEGK--KLYA--------HRCILMARCE--PLERMVNGHMREAFDLQIQIEDTSYQ 412
Query: 392 NSPSLVEALKDKQVKSI 408
SL+E L +QV+++
Sbjct: 413 CFYSLLEYLYTEQVEAL 429
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 63 DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLG-HGVDSDVLHPKL 121
D + P +E+ + +I CG H+ + + GE+FS+G G+LG G D ++ PK
Sbjct: 158 DKNSPTLIEALNGKRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKE 217
Query: 122 IDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLE 181
+ L + I ACG YHT A+ +G LY+WG + G LG G + + + LE
Sbjct: 218 VKNLKSTQI---ACGYYHTVAIN-NGQLYSWGKN--DSGQLGIGIYSAKEILPTLVRDLE 271
Query: 182 GIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAA 241
+ S++CG +HT + AGQLF+FG + G LG G + P ++ L + + A
Sbjct: 272 DQEIVSVACGCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIA 331
Query: 242 CGVWHTAAVVEVMVGN 257
G +H+ + ++ N
Sbjct: 332 AGFYHSIVLANPVIRN 347
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 285 EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN-PQADGKLPNR 343
+ KLV + F C H +ALT +G V++ G V GQLG+ Q P +
Sbjct: 54 QLKLVEKLRGKNIVKIFASNGCEH--VIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQ 111
Query: 344 VEGKLSKSFVEEIACGSYH-VAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKD 402
VE LS+ FV + C YH + + E+Y+ G+ G+LG G+ DD+NSP+L+EAL
Sbjct: 112 VEA-LSRKFVTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNG 170
Query: 403 KQVKSIACGTNFTAAICLHKWVSGVD 428
K++ SI CG H VS +D
Sbjct: 171 KRIVSIGCGQ-------YHSVVSSID 189
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 156/336 (46%), Gaps = 51/336 (15%)
Query: 64 SSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGR---------LGHGVDS 114
++P +++ + + A GG H V+ QG ++WG G+ +G V
Sbjct: 79 ENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRR 138
Query: 115 DVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPK 174
D++ PK + + VA G H+ +T G ++TWG G+ +VP
Sbjct: 139 DIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ------PWPPGDIKQIFVPV 190
Query: 175 RVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKG 234
RV G LE +VS I+ G +H + G+L +G+ +G LG GD + S P V L
Sbjct: 191 RVQG-LE--NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDD 247
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD--KEAKLVPTC 292
L V A G WH+ A+ + G+++ WG G+ GRLG GD K +K+VP
Sbjct: 248 LTLVDIAAGGWHSTALTD------------KGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 295
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN----------------PQA 336
V L E + +V+CG + +VALT G +++ G +G+LG P
Sbjct: 296 VNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPP 355
Query: 337 DGKLPNRVEGKLSKSFVEEIACGSYH-VAVLTSKTE 371
+G + E + K + IACG H +A++ K++
Sbjct: 356 EGSFNHADEEEEGKWSAKWIACGGRHTLAIVEWKSD 391
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 182/415 (43%), Gaps = 59/415 (14%)
Query: 35 VFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQ 94
+ WG G DG LG G N K + + +ALE V+++ G R++ +
Sbjct: 7 IIAWGSGE-DGQLGIGTNEE------KEWACVVEALEP---YSVRSVVSGSRNSLAICDD 56
Query: 95 GEVFSWGEESGGRLGHGVDSDVLH-PKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G +F+WG G LGH ++ + P + AL+N+ I A G +H AV G Y WG
Sbjct: 57 GTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 154 DGTYNF-------GLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFT 206
Y +G +PKR L V ++ G H+ V+T G ++T
Sbjct: 117 GNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLT---VRQVAAGGTHSVVLTREGHVWT 173
Query: 207 FGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSG 266
+G GD K + +P V+ L+ + + A G +H A+ E G
Sbjct: 174 WGQ----PWPPGDIKQIFVPVRVQGLENVSII--AVGAFHNLALEE------------DG 215
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
+L WG+ + G+LG GD + P V L + +A G + ALT G VY G
Sbjct: 216 RLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRG 275
Query: 327 VYGQLG---NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
+G+LG N ++ +P +V L++ + +++CG H LT ++++G+G +GRL
Sbjct: 276 EHGRLGFGDNDKSSKMVPQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRL 334
Query: 384 GHGDTDDRNSP------------SLVEALKDKQ----VKSIACGTNFTAAICLHK 422
G+G P S A ++++ K IACG T AI K
Sbjct: 335 GYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVEWK 389
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSGHVY 321
S+ + WG G+ G+LG G E K CV +EP R V G ++A+ G ++
Sbjct: 2 VSATSIIAWGSGEDGQLGIGTNEEKEW-ACVVEALEPYSVRSVVSGSRNSLAICDDGTMF 60
Query: 322 TMGSPVYGQLGNPQADG--KLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGA 379
T G G LG+P +P+RV+ L+ + + A G +H + + Y WG
Sbjct: 61 TWGWNQRGTLGHPPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNE 119
Query: 380 NGRLGHGDTDDR 391
G+ G D
Sbjct: 120 YGQCGEEPLKDE 131
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 24/128 (18%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G N K +P+ + D+ ++CGG H+ +
Sbjct: 267 GEVYGWGRGE-HGRLGFGDND-------KSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318
Query: 93 KQGEVFSWGEESGGRLGHG--------VDSDVLHPKLIDALSNMNIE--------LVACG 136
+ G +FS+G GRLG+G ++ ++ P + ++ + E +ACG
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACG 378
Query: 137 EYHTCAVT 144
HT A+
Sbjct: 379 GRHTLAIV 386
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAIC 419
+ S T + WG G +G+LG G +++ +VEAL+ V+S+ G+ + AIC
Sbjct: 1 MVSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAIC 54
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 167/348 (47%), Gaps = 47/348 (13%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G S + P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGN--------EVSHWVPKRVNGPLEGIHVSSISCGP 192
T +G +Y G N G LG G+ ++ + P + + +S G
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+A +T G+LF +GD + G +G ++ +V IP EV K + + +CG +H+A V
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSL 310
+ G+L+T+G+ + G+LG ++ P V + + +VACG
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPD-KVIQVACGGGH 292
Query: 311 TVALTTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAV 365
TV LT VY G +GQLG ++ K+ +R++ + + I+CG H A+
Sbjct: 293 TVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQK----ISHISCGENHTAL 347
Query: 366 LTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
+T +YT+G G +G+LG G + N P+L V+ IACG
Sbjct: 348 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 131/276 (47%), Gaps = 50/276 (18%)
Query: 188 ISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHT 247
+SCG HTA+VT +L+ FG +G LG G + ++S P +++LK + AACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 248 AAVVEV--------------------------MVG---------------NSSSSNCSSG 266
+ +G N+S++ G
Sbjct: 138 LVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPSDIIKQLSAGANTSAALTEDG 197
Query: 267 KLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSP 326
KLF WGD +G++G +K +P V V ++CG+ + +TT G +YT G P
Sbjct: 198 KLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSAFVTTDGELYTFGEP 255
Query: 327 VYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRL 383
G+LG P + + P RV G K V ++ACG H VLT K VY +G G G+L
Sbjct: 256 ENGKLGLPNQLLINHRSPQRVLGIPDK--VIQVACGGGHTVVLTEKV-VYAFGLGQFGQL 312
Query: 384 GHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G G + + P +++ +KD+++ I+CG N TA +
Sbjct: 313 GLGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSD 115
G K S P +++ V+ ACG H + G V++ G + G+LG G D D
Sbjct: 107 LGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD 166
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
H S++ I+ ++ G + A+T G L+ WGD + G +G N+ + +P
Sbjct: 167 TFHQIGFFTPSDI-IKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHE 223
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V G +S ISCG +H+A VT+ G+L+TFG+ G LG ++ ++ R + + G+
Sbjct: 224 VT---VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLIN-HRSPQRVLGI 279
Query: 236 --RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTC 292
+ ++ ACG HT + E +V + +G G G+LG G + P
Sbjct: 280 PDKVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKI 326
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
+ + + ++CG + T +T G +YT G +G+LG + N+ L +F
Sbjct: 327 IDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNF 384
Query: 353 ----VEEIACGSYHVAVLTS 368
V+ IACG H+ V +
Sbjct: 385 LKFTVQLIACGGCHMLVFAT 404
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 20/228 (8%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ + + G+K S++ E V + I+CG H+A V
Sbjct: 197 GKLFMWGDNSEGQI------------GLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
GE++++GE G+LG + H P+ + + + I+ VACG HT +T +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT-EKVVY 302
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+G G FG LG G + ++ ++ +S ISCG HTA++T G ++TFGDG
Sbjct: 303 AFGLG--QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360
Query: 211 TFGVLGHGDRKSVS--IPREVESLKGLRTVRAACGVWHTAAVVEVMVG 256
G LG G + P + ACG H +G
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCHMLVFATPRLG 408
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 14/142 (9%)
Query: 278 RLGHGDKEAKLVPTCVAALVEPNFCRV---ACGHSLTVALTT-SGHVYTMGSPVYGQLGN 333
R G G L P VA V P ++ A G + +L +G V+T G + +
Sbjct: 6 RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKTKFAE--- 62
Query: 334 PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNS 393
+P++ K ++CG H A++T ++Y +G G+LG G +
Sbjct: 63 -----NIPSKFWFKNDVPIC--LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISK 115
Query: 394 PSLVEALKDKQVKSIACGTNFT 415
P+ ++ALK ++VK ACG N T
Sbjct: 116 PTCIKALKPEKVKLAACGRNHT 137
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 165/338 (48%), Gaps = 25/338 (7%)
Query: 80 NIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYH 139
+++CG H+A+V +++ +G + G+LG G S V P + AL ++L ACG H
Sbjct: 39 HLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNH 98
Query: 140 TCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVT 199
T T G++Y G + G LG G+ RV+ + +S G +A +T
Sbjct: 99 TLVSTEGGNVYATGGN--DEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAALT 156
Query: 200 SAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSS 259
G+LF +GD + G +G + + +P +V K + + +CG +H+A V
Sbjct: 157 EDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSWI--SCGYYHSAFVT-------- 206
Query: 260 SSNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTS 317
+ G+L+ +G+ + G+LG ++ +P V + E +VACG +V LT
Sbjct: 207 ----TDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE-KVIQVACGGEHSVVLTED 261
Query: 318 GHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTW 375
VYT G +GQ LG + P VE +K+ + I+CG H A+LT +YT+
Sbjct: 262 A-VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKT-ISYISCGENHAALLTDNGLMYTF 319
Query: 376 GKGANGRLGHGDTDDRN--SPSLVEALKDKQVKSIACG 411
G G +G+LG G + N +P+L VK +ACG
Sbjct: 320 GDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACG 357
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 135/290 (46%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ H+ VT + LY +G + N+G LG G++ + P V L+ V +CG
Sbjct: 40 LSCGDEHSAVVTGNNKLYVFG--SNNWGQLGLGSKSAVSKPTCVKA-LKPEKVKLAACGR 96
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V T G ++ G G LG GD + + V ++ +T+A +
Sbjct: 97 NHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLSAGSNTSAAL- 155
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
G+LF WGD +G++G + VP V + ++CG+ +
Sbjct: 156 ----------TEDGRLFMWGDNSEGQIGLPNILNACVPHQVT--IGKPVSWISCGYYHSA 203
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+TT G +Y G G+LG P ++ ++P V K V ++ACG H VLT
Sbjct: 204 FVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEK--VIQVACGGEHSVVLTED 261
Query: 370 TEVYTWGKGANGRLGHGDT-DDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
VYT+G G G+LG G + + P +VE + +K + I+CG N A +
Sbjct: 262 A-VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALL 310
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 146/322 (45%), Gaps = 35/322 (10%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG-VDSDV 116
G K S P +++ V+ ACG H + + G V++ G G+LG G +
Sbjct: 69 LGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERT 128
Query: 117 LHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
++ S I+ ++ G + A+T G L+ WGD + G +G N ++ VP +V
Sbjct: 129 TFHRVSFFTSQHKIKQLSAGSNTSAALTEDGRLFMWGDNSE--GQIGLPNILNACVPHQV 186
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDR--KSVSIPREVESLKG 234
G VS ISCG +H+A VT+ G+L+ FG+ G LG + + IP+ V +
Sbjct: 187 TI---GKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPE 243
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
+ ++ ACG H+ + E V +T+G G G+LG G L T
Sbjct: 244 -KVIQVACGGEHSVVLTEDAV-------------YTFGLGQFGQLGLG---TLLFETSEP 286
Query: 295 ALVE----PNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSK 350
+VE ++CG + LT +G +YT G +G+LG + N+ L
Sbjct: 287 KVVENIGNKTISYISCGENHAALLTDNGLMYTFGDGRHGKLGLGLEN--FTNQFTPTLCC 344
Query: 351 SF----VEEIACGSYHVAVLTS 368
+F V+ +ACG H+ V +
Sbjct: 345 NFLKFVVKLVACGGCHMVVFAA 366
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 42 TGDGVLGGGLNRVGSC-FGVKM-DSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFS 99
T D V GL + G G + ++S PK +E+ + I+CG HAAL+ G +++
Sbjct: 259 TEDAVYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYT 318
Query: 100 WGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVACGEYH 139
+G+ G+LG G++ ++ P L ++LVACG H
Sbjct: 319 FGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCH 360
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 135/288 (46%), Gaps = 23/288 (7%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCAVTLSGDLYTWGD 154
E+F G G LG G + P+ +DALS I ++ G H T G+++TWG
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGH 125
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y+ LG+G VP ++ L V+ ++CG +H+ V+TS G++F +G G
Sbjct: 126 NAYS--QLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 215 LGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G G + IPR V L+ V ACG + AVV ++G+++ WG
Sbjct: 184 VGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVV------------NTGEVYVWGY 231
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G+LG G + P +AAL RVACG++ T+ LT G VY G+ YGQLG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 334 PQADGK---LPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
+ P VE VE AC S H A T VY WG+
Sbjct: 292 GNKSNQSYPAPVVVE---KDRIVEIAACHSAHTSAAKTQGGHVYMWGQ 336
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 29/278 (10%)
Query: 57 CFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEVFSWGEESGGRLGH 110
C G+ + S++ P+ L++ L + IAC G H L +GEVF+WG + +LG+
Sbjct: 77 CLGLGDVQSTIEPRRLDA---LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGN 133
Query: 111 GVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVS 169
G + L P I LSN + VACG YH+ +T G+++ WG N G +G G+ +
Sbjct: 134 GTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTAN 191
Query: 170 HWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREV 229
+P+RV G L+ V +I+CG + V + G+++ +G G LG G + P +
Sbjct: 192 QPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRI 251
Query: 230 ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV 289
+L+G+R R ACG HT + + G+++ WG G+LG G+K +
Sbjct: 252 AALQGIRIQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSY 299
Query: 290 PTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
P V +VE + +A HS + A T GHVY G
Sbjct: 300 PAPV--VVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 20/268 (7%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTF 212
GT G LG G+ S P+R++ L G ++ +S GP H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDA-LSGKKIACLSYGSGP-HIVLATTEGEVFTWGHNAY 128
Query: 213 GVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG+G +P + + L + ACG +H+ + S G++F W
Sbjct: 129 SQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLT------------SDGEVFAW 176
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G + G++G G + +P V ++ +ACG ++A+ +G VY G GQ
Sbjct: 177 GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQ 236
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + P R+ L ++ +ACG H VLT + +VY WG + G+LG G+
Sbjct: 237 LGLGSSGNQPTPCRI-AALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
+++ P+ V KD+ V+ AC + T+A
Sbjct: 296 NQSYPAPVVVEKDRIVEIAACHSAHTSA 323
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR +++L G + AC + + + +
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDALSGKKI---ACLSYGSGPHIVLAT------- 115
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 116 -TEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P + AL+ +++ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVL 272
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 21/182 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 171 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKVVV---NIACGQMCS 217
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P I AL + I+ VACG HT +T G
Sbjct: 218 MAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQ 277
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I V +C HT A T G ++ +
Sbjct: 278 VYAWGANSY--GQLGTGNKSNQSYPAPVVVEKDRI-VEIAACHSAHTSAAKTQGGHVYMW 334
Query: 208 GD 209
G
Sbjct: 335 GQ 336
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 159/337 (47%), Gaps = 35/337 (10%)
Query: 97 VFSWGEESGGRLGHGVDSDVLHPKLID---------ALSNMNIELVACGEYHTCAVTLSG 147
++SWG GR G G +D ++I L I+ VACG H+ VT SG
Sbjct: 64 LWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESG 123
Query: 148 DLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTF 207
L T G + G LG GN + + V G ++ ++ G WHT + G+L+ +
Sbjct: 124 RLLT--CGLNDNGQLGLGNLENASEFEEVKGTES---IADVAAGFWHTLAASKKGKLYAW 178
Query: 208 GDGTFGVLGHGDR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSS 265
G G LGH D K P+E+ L+ + ACG +H+ A+ +
Sbjct: 179 GSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTK------------D 226
Query: 266 GKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGS 325
G+++TWG G GRLGHG E + +P V ALV N + G + A++TSG V+ G
Sbjct: 227 GEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGY 286
Query: 326 PVYGQLGNPQADGKL-PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLG 384
+ LG +L P ++ S + ++A GS+H A ++ ++TWG +G LG
Sbjct: 287 GHFYVLGQGDKKDQLAPVVLDFPTS---IRQLAFGSFHAAAVSHSGMLFTWGHATHGPLG 343
Query: 385 HG--DTDDRNSPSLVEALKDKQ-VKSIACGTNFTAAI 418
HG + P++++A Q K +ACG+ T +
Sbjct: 344 HGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVV 380
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 29/383 (7%)
Query: 37 IWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLD--VQNIACGGRHAALVNK 93
+W G+ D G G G + F V P+ +E V+ ++ +ACGG H+ +V +
Sbjct: 64 LWSWGSADHGRGGSGGHTDAPIFEVIQKE--PEKVEKPVLPAKLIKKVACGGAHSMIVTE 121
Query: 94 QGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWG 153
G + + G G+LG G + + + +I VA G +HT A + G LY WG
Sbjct: 122 SGRLLTCGLNDNGQLGLGNLENA--SEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWG 179
Query: 154 DGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTF 212
+ G LGH + V V + L + ++CG +H+ +T G+++T+G G
Sbjct: 180 SNKH--GQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAH 237
Query: 213 GVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
G LGHG + +P+ VE+L G G +++AV +SGK+F WG
Sbjct: 238 GRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAV------------STSGKVFVWG 285
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFCR-VACGHSLTVALTTSGHVYTMGSPVYGQL 331
G LG GDK+ +L P L P R +A G A++ SG ++T G +G L
Sbjct: 286 YGHFYVLGQGDKKDQLAPVV---LDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPL 342
Query: 332 GNPQADGKL---PNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDT 388
G+ + P ++ +++ACGS H V+T +V+++G G G+LG G
Sbjct: 343 GHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSD 402
Query: 389 DDRNSPSLVEALKDKQVKSIACG 411
D P + K ++ +ACG
Sbjct: 403 LDHYEPKQIPRFVGKSLRQVACG 425
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 111/235 (47%), Gaps = 29/235 (12%)
Query: 198 VTSAG--QLFTFGDGTFGVLGHGDRKSVSI-------PREVES--LKGLRTVRAACGVWH 246
VT AG L+++G G G G I P +VE L + ACG H
Sbjct: 56 VTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAH 115
Query: 247 TAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVAC 306
+ V E SG+L T G D G+LG G+ E V + VA
Sbjct: 116 SMIVTE------------SGRLLTCGLNDNGQLGLGNLENASEFEEVKG--TESIADVAA 161
Query: 307 GHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKL---PNRVEGKLSKSFVEEIACGSYHV 363
G T+A + G +Y GS +GQLG+ KL P + L + ++++ACGSYH
Sbjct: 162 GFWHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL-LLRDAPIKQVACGSYHS 220
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
LT EVYTWG GA+GRLGHG T+D P VEAL + + SI G +++A+
Sbjct: 221 MALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAV 275
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 16/216 (7%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V+ WG G G LG G D +PK +E+ V ++ +I G +++ V+
Sbjct: 227 GEVYTWGFGA-HGRLGHGSTE---------DEFMPKRVEALVGENISSIHAGFEYSSAVS 276
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTW 152
G+VF WG LG G D L P ++D ++ I +A G +H AV+ SG L+TW
Sbjct: 277 TSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTS--IRQLAFGSFHAAAVSHSGMLFTW 334
Query: 153 GDGTYNFGLLGHGNEVSHWV--PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
G T+ G LGHG + + + P ++ P + + ++CG HT VVT G +F+FG G
Sbjct: 335 GHATH--GPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLG 392
Query: 211 TFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWH 246
G LG G P+++ G + ACG++H
Sbjct: 393 GQGQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFH 428
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 165/347 (47%), Gaps = 45/347 (12%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G S + P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGN--------EVSHWVPKRVNGPLEGIHVSSISCGP 192
T G +Y G N G LG G+ ++ + PK ++ +S G
Sbjct: 138 LVSTDKGSVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPKD--------NIKQLSAGA 187
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+A +T G+LF +GD + G +G ++ +V IP EV K + + +CG +H+A V
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV----PTCVAALVEPNFCRVACGH 308
G+L+T+G+ + G+LG ++ L+ P V + E +VACG
Sbjct: 245 -----------VDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPE-KVIQVACGG 290
Query: 309 SLTVALTTSGHVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVL 366
TV LT VY G +GQ LG + P +E ++ + I+CG H A++
Sbjct: 291 GHTVVLTDKV-VYAFGLGQFGQLGLGTFLFETSEPKVIE-RIKDQKISYISCGENHTALM 348
Query: 367 TSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
T +YT+G G +G+LG G + N P+L V+ IACG
Sbjct: 349 TDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACG 395
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V T G ++ G G LG GD R+ G T + A
Sbjct: 135 NHTLVSTDKGSVYAAGGNNEGQLGLGDTDD----RDTFHQIGFFTPKDNIKQLSAGA--- 187
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
N+S++ GKLF WGD +G++G +K +P V V ++CG+ +
Sbjct: 188 ----NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYHSA 241
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+T G +YT G P G+LG P + + P RV G K V ++ACG H VLT K
Sbjct: 242 FVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEK--VIQVACGGGHTVVLTDK 299
Query: 370 TEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
VY +G G G+LG G + + P ++E +KD+++ I+CG N TA +
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALM 348
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSD 115
G K S P +++ V+ ACG H + +G V++ G + G+LG G D D
Sbjct: 107 LGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRD 166
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
H ++ NI+ ++ G + A+T G L+ WGD + G +G N+ + +P
Sbjct: 167 TFH-QIGFFTPKDNIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHE 223
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V G +S ISCG +H+A VT G+L+TFG+ G LG ++ ++ R + + G+
Sbjct: 224 VTV---GKPISWISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLIN-HRSPQRVLGI 279
Query: 236 --RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTC 292
+ ++ ACG HT + + +V + +G G G+LG G + P
Sbjct: 280 PEKVIQVACGGGHTVVLTDKVV-------------YAFGLGQFGQLGLGTFLFETSEPKV 326
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
+ + + ++CG + T +T G +YT G +G+LG + N+ L +F
Sbjct: 327 IERIKDQKISYISCGENHTALMTDIGLMYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNF 384
Query: 353 ----VEEIACGSYHVAVLTS 368
V+ IACG H+ V +
Sbjct: 385 LRFTVQLIACGGCHMLVFAT 404
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 18/188 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ + + G+K S++ E V + I+CG H+A V
Sbjct: 197 GKLFMWGDNSEGQI------------GLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
GE++++GE G+LG + H P+ + + I+ VACG HT +T D
Sbjct: 245 VDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVIQ-VACGGGHTVVLT---DKV 300
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+ G FG LG G + +V ++ +S ISCG HTA++T G ++TFGDG
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTFGDG 360
Query: 211 TFGVLGHG 218
G LG G
Sbjct: 361 RHGKLGLG 368
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 31 ALGDVFIWGEGTGD-GVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAA 89
L D ++ G G G LG G ++S PK +E + I+CG H A
Sbjct: 295 VLTDKVVYAFGLGQFGQLGLGT--------FLFETSEPKVIERIKDQKISYISCGENHTA 346
Query: 90 LVNKQGEVFSWGEESGGRLGHGVD--SDVLHPKLIDALSNMNIELVACGEYH 139
L+ G ++++G+ G+LG G++ ++ P L ++L+ACG H
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCH 398
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 161/337 (47%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G + ++ P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T +G +Y G N G LG G+ ++ + +S G +A +T
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D+ +V IP EV K + + +CG +H+A V
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG ++ P V + E +VACG TV LT
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEK- 299
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VY G +GQ LG + P +E ++ + I+CG H A++T +YT+G
Sbjct: 300 VVYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L V+ IACG
Sbjct: 359 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSN--NWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRA-ACGVWHTAAVV 251
HT V T G ++ G G LG GD ++ T++ + G +AA+
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 194
Query: 252 EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLT 311
E GKLF WGD +G++G DK +P V V ++CG+ +
Sbjct: 195 E------------DGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHS 240
Query: 312 VALTTSGHVYTMGSPVYGQLGNPQ---ADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTS 368
+T G +YT G P G+LG P + + P RV G + V ++ACG H VLT
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTE 298
Query: 369 KTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
K VY +G G G+LG G + + P ++E +KD+++ I+CG N TA +
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 31/311 (9%)
Query: 67 PKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDA 124
P +++ V+ ACG H + G V++ G + G+LG G D D H +++
Sbjct: 116 PTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFF 174
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
I+ ++ G + A+T G L+ WGD + G +G ++ + +P V G
Sbjct: 175 TPADTIKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEVT---VGKP 229
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAAC 242
+S ISCG +H+A VT G+L+TFG+ G LG + ++ R + + G+ R ++ AC
Sbjct: 230 ISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVAC 288
Query: 243 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV-PTCVAALVEPNF 301
G HT + E +V + +G G G+LG G + P + + +
Sbjct: 289 GGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKI 335
Query: 302 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIA 357
C ++CG + T +T G +YT G +G+LG + N+ L +F V+ IA
Sbjct: 336 CHISCGENHTALMTELGLLYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNFLRFAVQLIA 393
Query: 358 CGSYHVAVLTS 368
CG H+ V +
Sbjct: 394 CGGCHMLVFAT 404
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S PK +E + +I+CG H AL+ + G ++++G+ G+LG G++ ++ P
Sbjct: 319 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Query: 120 KLIDALSNMNIELVACGEYH 139
L ++L+ACG H
Sbjct: 379 TLCSNFLRFAVQLIACGGCH 398
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 138/289 (47%), Gaps = 26/289 (8%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEY----HTCAVTLSGDLYT 151
EVF G G LG G + P+ +D+LS I AC Y H T G+++T
Sbjct: 42 EVFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI---ACLSYGSGPHIVLATTEGEVFT 98
Query: 152 WGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGT 211
WG Y+ LG+G VP ++ L HV ++CG +H+ V+TS G++F +G
Sbjct: 99 WGHNAYS--QLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNN 156
Query: 212 FGVLGHGDRKSVSIPREV-ESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFT 270
G +G G + IPR V SL+ V ACG + AVV+ +G+++
Sbjct: 157 SGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVD------------NGEVYV 204
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQ 330
WG G+LG G + P C AL RVACG++ T+ LT G VY G+ YGQ
Sbjct: 205 WGYNGNGQLGLGSSGNQSTP-CRLALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQ 263
Query: 331 LGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
LG +++ P V + + +E AC S H A T VY WG+
Sbjct: 264 LGTGNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 311
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 31/291 (10%)
Query: 44 DGVLGGGLNRVGSCFGV-KMDSSL-PKALESAVVLDVQNIAC----GGRHAALVNKQGEV 97
D V G N G C G+ + S++ P+ L+S L + IAC G H L +GEV
Sbjct: 41 DEVFVLGTNCCG-CLGLGDVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEV 96
Query: 98 FSWGEESGGRLGHGVDSDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGT 156
F+WG + +LG+G + L P I LSN ++ VACG YH+ +T G+++ WG
Sbjct: 97 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYN- 155
Query: 157 YNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLG 216
N G +G G+ + +P+RV L+ V +I+CG + V G+++ +G G LG
Sbjct: 156 -NSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQLG 214
Query: 217 HGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 276
G + S P + +L+G+R R ACG HT + + G+++ WG
Sbjct: 215 LGSSGNQSTPCRL-ALQGVRVQRVACGYAHTLVLTD------------EGQVYAWGANSY 261
Query: 277 GRLGHGDKEAKLVPTCVAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
G+LG G+K + PT V +VE + +A HS + A T GHVY G
Sbjct: 262 GQLGTGNKSNQSYPTPV--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 310
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 19/267 (7%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++ +S G H + T+ G++FT+G +
Sbjct: 47 GTNCCGCLGLGDVQSTIEPRRLDS-LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNHGLVPCHISTNLSNKHVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCV-AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++L +ACG ++A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P R+ L V+ +ACG H VLT + +VY WG + G+LG G+ +
Sbjct: 214 GLGSSGNQSTPCRL--ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 271
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 272 QSYPTPVVVEKDRIIEIAACHSAHTSA 298
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVA 294
L+ +R AC V+ +A GN + ++F G G LG GD ++ + P +
Sbjct: 18 LQLIRQAC-VFGSA-------GNEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPRRLD 69
Query: 295 ALVEPNFCRVACGHSLTVAL-TTSGHVYTMGSPVYGQLGNPQAD-GKLPNRVEGKLSKSF 352
+L ++ G + L TT G V+T G Y QLGN + G +P + LS
Sbjct: 70 SLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKH 129
Query: 353 VEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDDRNSPSLV-EALKDKQVKSIACG 411
V E+ACGSYH VLTS EV+ WG +G++G G T ++ P V +L++K V +IACG
Sbjct: 130 VIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTSSLQNKVVVNIACG 189
Query: 412 TNFTAAI 418
+ A+
Sbjct: 190 QMCSMAV 196
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G+V++WG G+G LG G + S P L V VQ +ACG H ++
Sbjct: 200 GEVYVWGY-NGNGQLG---------LGSSGNQSTPCRLALQGV-RVQRVACGYAHTLVLT 248
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAV-TLSGDLYT 151
+G+V++WG S G+LG G S+ +P + + IE+ AC HT A T G +Y
Sbjct: 249 DEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYM 308
Query: 152 WG 153
WG
Sbjct: 309 WG 310
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 160/341 (46%), Gaps = 39/341 (11%)
Query: 85 GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVT 144
G +V G VF++G+ R + S I + ++CG+ HT VT
Sbjct: 2 GESEEVVPDSGAVFTFGK---TRFAENIPSKFWFKNDIPTV-------LSCGDEHTAVVT 51
Query: 145 LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQL 204
+ LY +G + N+G LG G++ + P V L+ V +CG HT V T G++
Sbjct: 52 GNKKLYMFG--SNNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACGRNHTLVSTEGGKV 108
Query: 205 FTFGDGTFGVLGHGD---RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 261
+ G G LG GD R + + S ++ + A N+S++
Sbjct: 109 YAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGS--------------NTSAA 154
Query: 262 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVY 321
G+LF WGD +G++G D VP V V ++CG+ + +TT G +Y
Sbjct: 155 LTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVT--VGKPISWISCGYYHSAFVTTEGELY 212
Query: 322 TMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKG 378
T G P G+LG P + ++P V G K V ++ACG H VLT K VYT+G G
Sbjct: 213 TFGEPESGKLGLPNQLLCNHRMPQPVPGIPEK--VVQVACGGGHTVVLTEKA-VYTFGLG 269
Query: 379 ANGRLGHGDTDDRNS-PSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G S P ++E +KD+++ SI+CG N TA I
Sbjct: 270 QFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALI 310
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 23/310 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G S V P + AL ++ ACG HT
Sbjct: 40 LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T G +Y G N G LG G+ ++ + +S G +A +T
Sbjct: 100 LVSTEGGKVYAAGGN--NEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAALTE 157
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D +V +P++V K + + +CG +H+A V
Sbjct: 158 DGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT--------- 206
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDKEA--KLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
+ G+L+T+G+ + G+LG ++ +P V + E +VACG TV LT
Sbjct: 207 ---TEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPE-KVVQVACGGGHTVVLTEKA 262
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VYT G +GQ LG + +P +E + + I+CG H A++T +YT+G
Sbjct: 263 -VYTFGLGQFGQLGLGTFLFETSVPKVIE-HVKDQKISSISCGENHTALITDIGLMYTFG 320
Query: 377 KGANGRLGHG 386
G G+LG G
Sbjct: 321 DGRYGKLGLG 330
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 127/248 (51%), Gaps = 26/248 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE 137
++ ++ G +A + + GE+F WG+ S G++G ++V P+ + I ++CG
Sbjct: 142 IKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTV--GKPISWISCGY 199
Query: 138 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEV--SHWVPKRVNGPLEGIHVSSISCGPWHT 195
YH+ VT G+LYT+G+ G LG N++ +H +P+ V G E V ++CG HT
Sbjct: 200 YHSAFVTTEGELYTFGEPES--GKLGLPNQLLCNHRMPQPVPGIPE--KVVQVACGGGHT 255
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGD-RKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVM 254
V+T ++TFG G FG LG G S+P+ +E +K + +CG HTA + ++
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALITDI- 313
Query: 255 VGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE--AKLVPTCVAALVEPNFCRVACG--HSL 310
G ++T+GDG G+LG G + + +PT + + V+CG H L
Sbjct: 314 -----------GLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCGGCHML 362
Query: 311 TVALTTSG 318
A+ G
Sbjct: 363 VFAVPRLG 370
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 23/279 (8%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVL 117
G K S P +++ V+ ACG H + + G+V++ G + G+LG G +
Sbjct: 69 LGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERN 128
Query: 118 HPKLIDAL-SNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 176
LI S I+ ++ G + A+T G+L+ WGD + G +G + + VP++V
Sbjct: 129 TFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSE--GQIGLKDVTNVCVPQQV 186
Query: 177 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRK--SVSIPREVESLKG 234
G +S ISCG +H+A VT+ G+L+TFG+ G LG ++ + +P+ V +
Sbjct: 187 TV---GKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPE 243
Query: 235 LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCV 293
+ V+ ACG HT + E V +T+G G G+LG G + VP +
Sbjct: 244 -KVVQVACGGGHTVVLTEKAV-------------YTFGLGQFGQLGLGTFLFETSVPKVI 289
Query: 294 AALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLG 332
+ + ++CG + T +T G +YT G YG+LG
Sbjct: 290 EHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLG 328
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S+PK +E + +I+CG H AL+ G ++++G+ G+LG G++ ++ P
Sbjct: 281 FETSVPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLP 340
Query: 120 KLIDALSNMNIELVACGEYH 139
L +LV+CG H
Sbjct: 341 TLCSHFLRFIAQLVSCGGCH 360
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 51/350 (14%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G S + P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGN--------EVSHWVPKRVNGPLEGIHVSSISCGP 192
T +G +Y G N G LG G+ ++ + P + + +S G
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
+A +T G+LF +GD + G +G ++ +V IP EV K + + +CG +H+A V
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLV----PTCVAALVEPNFCRVACGH 308
+ G+L+T+G+ + G+LG ++ L+ P V + + +VACG
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPD-KVIQVACGG 290
Query: 309 SLTVALTTSGHVYTMGSPVYGQLG-----NPQADGKLPNRVEGKLSKSFVEEIACGSYHV 363
TV LT VY G +GQLG ++ K+ +R++ + + I+CG H
Sbjct: 291 GHTVVLTEKV-VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQK----ISHISCGENHT 345
Query: 364 AVLTSKTEVYTWGKGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
A++T +YT+G G +G+LG G + N P+L V+ IACG
Sbjct: 346 ALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 27/292 (9%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKSAISKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V T G ++ G G LG GD R G + + +++
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDD-------------RDTFHQIGFFTPSDIIK 181
Query: 253 VMVG--NSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSL 310
+ N+S++ GKLF WGD +G++G +K +P V V ++CG+
Sbjct: 182 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT--VGKPISWISCGYYH 239
Query: 311 TVALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLT 367
+ +TT G +YT G P G+LG P + + P RV G K V ++ACG H VLT
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDK--VIQVACGGGHTVVLT 297
Query: 368 SKTEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
K VY +G G G+LG G + + P +++ +KD+++ I+CG N TA +
Sbjct: 298 EKV-VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALM 348
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 31/320 (9%)
Query: 58 FGVKMDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSD 115
G K S P +++ V+ ACG H + G V++ G + G+LG G D D
Sbjct: 107 LGSKSAISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRD 166
Query: 116 VLHPKLIDALSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKR 175
H S++ I+ ++ G + A+T G L+ WGD + G +G N+ + +P
Sbjct: 167 TFHQIGFFTPSDI-IKQLSAGANTSAALTEDGKLFMWGDNSE--GQIGLKNKSNVCIPHE 223
Query: 176 VNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL 235
V G +S ISCG +H+A VT+ G+L+TFG+ G LG ++ ++ R + + G+
Sbjct: 224 VTV---GKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLIN-HRSPQRVLGI 279
Query: 236 --RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTC 292
+ ++ ACG HT + E +V + +G G G+LG G + P
Sbjct: 280 PDKVIQVACGGGHTVVLTEKVV-------------YAFGLGQFGQLGLGTFLFETSEPKI 326
Query: 293 VAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF 352
+ + + ++CG + T +T G +YT G +G+LG + N+ L +F
Sbjct: 327 IDRIKDQKISHISCGENHTALMTDIGLMYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNF 384
Query: 353 ----VEEIACGSYHVAVLTS 368
V+ IACG H+ V +
Sbjct: 385 LKFTVQLIACGGCHMLVFAT 404
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 94/188 (50%), Gaps = 18/188 (9%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPKALESAVVLDVQNIACGGRHAALVN 92
G +F+WG+ + + G+K S++ E V + I+CG H+A V
Sbjct: 197 GKLFMWGDNSEGQI------------GLKNKSNVCIPHEVTVGKPISWISCGYYHSAFVT 244
Query: 93 KQGEVFSWGEESGGRLGHGVDSDVLH--PKLIDALSNMNIELVACGEYHTCAVTLSGDLY 150
GE++++GE G+LG + H P+ + + + I+ VACG HT +T +Y
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT-EKVVY 302
Query: 151 TWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDG 210
+G G FG LG G + ++ ++ +S ISCG HTA++T G ++TFGDG
Sbjct: 303 AFGLG--QFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360
Query: 211 TFGVLGHG 218
G LG G
Sbjct: 361 RHGKLGLG 368
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 22/149 (14%)
Query: 271 WGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV---ACGHSLTVALT-TSGHVYTMGSP 326
WG G G+ L P VA V P ++ A G + +L +G V+T G
Sbjct: 7 WGTGGLGQY--------LRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFTFGKT 58
Query: 327 VYGQLGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHG 386
+ + +P++ K ++CG H A++T ++Y +G G+LG G
Sbjct: 59 KFAE--------NIPSKFWFKNDVPIC--LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLG 108
Query: 387 DTDDRNSPSLVEALKDKQVKSIACGTNFT 415
+ P+ ++ALK ++VK ACG N T
Sbjct: 109 SKSAISKPTCIKALKPEKVKLAACGRNHT 137
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 161/337 (47%), Gaps = 25/337 (7%)
Query: 81 IACGGRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHT 140
++CG H A+V +++ +G + G+LG G + ++ P I AL ++L ACG HT
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137
Query: 141 CAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTS 200
T +G +Y G N G LG G+ ++ + +S G +A +T
Sbjct: 138 LVSTDTGGVYAAGGN--NEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 195
Query: 201 AGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSS 260
G+LF +GD + G +G D+ +V IP EV K + + +CG +H+A V
Sbjct: 196 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT--------- 244
Query: 261 SNCSSGKLFTWGDGDKGRLGHGDK--EAKLVPTCVAALVEPNFCRVACGHSLTVALTTSG 318
G+L+T+G+ + G+LG ++ P V + E +VACG TV LT
Sbjct: 245 ---MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTEKV 300
Query: 319 HVYTMGSPVYGQ--LGNPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWG 376
VY G +GQ LG + P +E ++ + I+CG H A++T +YT+G
Sbjct: 301 -VYAFGLGQFGQLGLGTFLFETSEPKIIE-RIKDQKICHISCGENHTALMTELGLLYTFG 358
Query: 377 KGANGRLGHGDTDDRNS--PSLVEALKDKQVKSIACG 411
G +G+LG G + N P+L V+ IACG
Sbjct: 359 DGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 133 VACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGP 192
++CG+ HT VT + LY +G + N+G LG G++ + P + L+ V +CG
Sbjct: 78 LSCGDEHTAIVTGNNKLYMFG--SNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 134
Query: 193 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVE 252
HT V T G ++ G G LG GD ++ T++ +T+A +
Sbjct: 135 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAAL- 193
Query: 253 VMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTV 312
GKLF WGD +G++G DK +P V V ++CG+ +
Sbjct: 194 ----------TEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT--VGKPISWISCGYYHSA 241
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQA---DGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSK 369
+T G +YT G P G+LG P + + P RV G + V ++ACG H VLT K
Sbjct: 242 FVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPER--VIQVACGGGHTVVLTEK 299
Query: 370 TEVYTWGKGANGRLGHGD-TDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
VY +G G G+LG G + + P ++E +KD+++ I+CG N TA +
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALM 348
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 31/300 (10%)
Query: 78 VQNIACGGRHAALVNKQGEVFSWGEESGGRLGHG--VDSDVLHPKLIDALSNMNIELVAC 135
V+ ACG H + G V++ G + G+LG G D D H +++ I+ ++
Sbjct: 127 VKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFH-QIVFFTPADTIKQLSA 185
Query: 136 GEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT 195
G + A+T G L+ WGD + G +G ++ + +P V G +S ISCG +H+
Sbjct: 186 GANTSAALTEDGKLFMWGDNSE--GQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHS 240
Query: 196 AVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGL--RTVRAACGVWHTAAVVEV 253
A VT G+L+TFG+ G LG + ++ R + + G+ R ++ ACG HT + E
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMN-HRSPQRVLGIPERVIQVACGGGHTVVLTEK 299
Query: 254 MVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL-VPTCVAALVEPNFCRVACGHSLTV 312
+V + +G G G+LG G + P + + + C ++CG + T
Sbjct: 300 VV-------------YAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTA 346
Query: 313 ALTTSGHVYTMGSPVYGQLGNPQADGKLPNRVEGKLSKSF----VEEIACGSYHVAVLTS 368
+T G +YT G +G+LG + N+ L +F V+ IACG H+ V +
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLGMEN--FTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 62 MDSSLPKALESAVVLDVQNIACGGRHAALVNKQGEVFSWGEESGGRLGHGVD--SDVLHP 119
++S PK +E + +I+CG H AL+ + G ++++G+ G+LG G++ ++ P
Sbjct: 319 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFP 378
Query: 120 KLIDALSNMNIELVACGEYH 139
L ++L+ACG H
Sbjct: 379 TLCSNFLRFAVQLIACGGCH 398
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/275 (32%), Positives = 139/275 (50%), Gaps = 23/275 (8%)
Query: 57 CFGV-KMDSSL-PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSWGEESGGRLGHGVD 113
C GV + S++ P+ L+S + +++ G G H L GEVF+WG + +LG+G
Sbjct: 53 CLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTT 112
Query: 114 SDVLHPKLIDA-LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV 172
+ L P I LSN + VACG YH+ +T G+++ WG N G +G G+ + +
Sbjct: 113 NHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTANQPI 170
Query: 173 PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESL 232
P+RV G L+ V +I+CG + V G+++ +G G LG G + P V +L
Sbjct: 171 PRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAAL 230
Query: 233 KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTC 292
+G+R R ACG HT + + G+++ WG G+LG G+K + PT
Sbjct: 231 QGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYPTP 278
Query: 293 VAALVEPN-FCRVACGHS--LTVALTTSGHVYTMG 324
V +VE + +A HS + A T GHVY G
Sbjct: 279 V--VVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 137/286 (47%), Gaps = 19/286 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCAVTLSGDLYTWGD 154
E+F G G LG G + P+ +D+L+ I ++ G H T G+++TWG
Sbjct: 42 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGH 101
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y+ LG+G VP ++ L V ++CG +H+ V+TS G++F +G G
Sbjct: 102 NAYS--QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 159
Query: 215 LGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G G + IPR V L+ + ACG + AVV+ +G+++ WG
Sbjct: 160 VGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVD------------TGEVYVWGY 207
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G+LG G + P VAAL RVACG++ T+ LT G +Y G+ YGQLG
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGT 267
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
+++ P V + + +E AC S H A T VY WG+
Sbjct: 268 GNKSNQSYPTPVVVEKDR-IIEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 132/267 (49%), Gaps = 18/267 (6%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPW-HTAVVTSAGQLFTFGDGTFG 213
GT G LG G+ S P+R++ L G ++S+S G H + T+ G++FT+G +
Sbjct: 47 GTNCSGCLGVGDIQSTIEPRRLDS-LTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYS 105
Query: 214 VLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWG 272
LG+G +P + + L + + ACG +H+ + S G++F WG
Sbjct: 106 QLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWG 153
Query: 273 DGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQL 331
+ G++G G + +P V ++ +ACG ++A+ +G VY G GQL
Sbjct: 154 YNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQL 213
Query: 332 G-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTDD 390
G + P RV L V+ +ACG H VLT + ++Y WG + G+LG G+ +
Sbjct: 214 GLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN 272
Query: 391 RNSPSLVEALKDKQVKSIACGTNFTAA 417
++ P+ V KD+ ++ AC + T+A
Sbjct: 273 QSYPTPVVVEKDRIIEIAACHSAHTSA 299
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 42 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGS-----------GPHIVLA 90
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 91 TTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 150
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ A+ +P RV G L V IACG + EVY WG N
Sbjct: 151 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGN 210
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 211 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 21/181 (11%)
Query: 33 GDVFIWGEGTGDGVLGGGLNRVGSCFGVKMDSSLPK----ALESAVVLDVQNIACGGRHA 88
G+VF WG +VGS G + +P+ L++ VV+ NIACG +
Sbjct: 147 GEVFAWGYNNS--------GQVGS--GSTANQPIPRRVTGCLQNKVVM---NIACGQMCS 193
Query: 89 ALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGEYHTCAVTLSGD 148
V GEV+ WG G+LG G + P + AL + ++ VACG HT +T G
Sbjct: 194 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253
Query: 149 LYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHT-AVVTSAGQLFTF 207
+Y WG +Y G LG GN+ + P V + I + +C HT A T G ++ +
Sbjct: 254 IYAWGANSY--GQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKTQGGHVYMW 310
Query: 208 G 208
G
Sbjct: 311 G 311
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 131/262 (50%), Gaps = 19/262 (7%)
Query: 67 PKALESAVVLDVQNIACG-GRHAALVNKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDA- 124
P+ L+S + +++ G G H L +GEVF+WG + +LG+G + L P I
Sbjct: 89 PRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 148
Query: 125 LSNMNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 184
LSN + VACG YH+ +T G+++ WG N G +G G+ V+ +P+RV G L+
Sbjct: 149 LSNKQVIEVACGSYHSLVLTSDGEVFAWGYN--NSGQVGSGSTVNQPIPRRVTGCLQNKV 206
Query: 185 VSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGV 244
V +I+CG V G+++ +G G LG G + P V +L+G+R R ACG
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 266
Query: 245 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCRV 304
HT + + G+++ WG G+LG G+K + PT V + + +
Sbjct: 267 AHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPV-TMEKDRIIEI 313
Query: 305 ACGHS--LTVALTTSGHVYTMG 324
A HS + A T GHVY G
Sbjct: 314 AACHSTHTSAAKTQGGHVYMWG 335
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 137/286 (47%), Gaps = 19/286 (6%)
Query: 96 EVFSWGEESGGRLGHGVDSDVLHPKLIDALSNMNIELVACGE-YHTCAVTLSGDLYTWGD 154
E+F G G LG G + P+ +D+LS I ++ G H T G+++TWG
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVFTWGH 125
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGV 214
Y+ LG+G VP +++ L V ++CG +H+ V+TS G++F +G G
Sbjct: 126 NAYS--QLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQ 183
Query: 215 LGHGDRKSVSIPREVE-SLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGD 273
+G G + IPR V L+ V ACG AVV+ +G+++ WG
Sbjct: 184 VGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVD------------TGEVYVWGY 231
Query: 274 GDKGRLGHGDKEAKLVPTCVAALVEPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGN 333
G+LG G + P VAAL RVACG++ T+ LT G VY G+ YGQLG
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGT 291
Query: 334 -PQADGKLPNRVEGKLSKSFVEEIACGSYHV-AVLTSKTEVYTWGK 377
+++ P V + + +E AC S H A T VY WG+
Sbjct: 292 GNKSNQSYPTPVTMEKDR-IIEIAACHSTHTSAAKTQGGHVYMWGQ 336
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 20/268 (7%)
Query: 155 GTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVTSAGQLFTFGDGTF 212
GT G LG G+ S P+R++ L G ++S+S GP H + T+ G++FT+G +
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLD-SLSGKKIASLSYGSGP-HIVLATTEGEVFTWGHNAY 128
Query: 213 GVLGHGDRKSVSIPREVES-LKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTW 271
LG+G +P ++ + L + + ACG +H+ + S G++F W
Sbjct: 129 SQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAW 176
Query: 272 GDGDKGRLGHGDKEAKLVPTCVAALVEPNFC-RVACGHSLTVALTTSGHVYTMGSPVYGQ 330
G + G++G G + +P V ++ +ACG +A+ +G VY G GQ
Sbjct: 177 GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQ 236
Query: 331 LG-NPQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGANGRLGHGDTD 389
LG + P RV L V+ +ACG H VLT + +VY WG + G+LG G+
Sbjct: 237 LGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKS 295
Query: 390 DRNSPSLVEALKDKQVKSIACGTNFTAA 417
+++ P+ V KD+ ++ AC + T+A
Sbjct: 296 NQSYPTPVTMEKDRIIEIAACHSTHTSA 323
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 13/218 (5%)
Query: 203 QLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSN 262
++F G G LG GD +S PR ++SL G + + G G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGS-----------GPHIVLA 114
Query: 263 CSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA-LVEPNFCRVACGHSLTVALTTSGHVY 321
+ G++FTWG +LG+G LVP ++ L VACG ++ LT+ G V+
Sbjct: 115 TTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 322 TMGSPVYGQLGN-PQADGKLPNRVEGKLSKSFVEEIACGSYHVAVLTSKTEVYTWGKGAN 380
G GQ+G+ + +P RV G L V IACG + EVY WG N
Sbjct: 175 AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGN 234
Query: 381 GRLGHGDTDDRNSPSLVEALKDKQVKSIACGTNFTAAI 418
G+LG G + ++ +P V AL+ +V+ +ACG T +
Sbjct: 235 GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,858,949,850
Number of Sequences: 23463169
Number of extensions: 484558805
Number of successful extensions: 1505970
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4143
Number of HSP's successfully gapped in prelim test: 4916
Number of HSP's that attempted gapping in prelim test: 1375382
Number of HSP's gapped (non-prelim): 39414
length of query: 657
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 508
effective length of database: 8,863,183,186
effective search space: 4502497058488
effective search space used: 4502497058488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)