BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006211
(656 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|B Chain B, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|C Chain C, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|D Chain D, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
Length = 356
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 215/352 (61%), Gaps = 41/352 (11%)
Query: 25 QTWIKAGYWLAGREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVR 84
QT +KA YW EFP++DI+S+LFTHL CAFA+++S T Q+++SSANQ FS F +V+
Sbjct: 2 QTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQ 61
Query: 85 RKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGF 144
R+NPS+KTLLSI G + + +SM + + RKSFI+SSIR AR YGF
Sbjct: 62 RRNPSVKTLLSI------------GGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGF 109
Query: 145 QGIDLFWLWPNS-TDLNSLGILLDEWK------ASASDQPELTLSMAVRYSPTHETVSYP 197
G+DL W +P+S T++ + G LL EW+ AS+S +P L L+ AV YS + +V YP
Sbjct: 110 HGLDLDWEYPSSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYP 169
Query: 198 IDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPS-SNISTDFGIREWLRRGFPANKL 256
+ ++ +L+W +L+AYD++ P VTG AAL++PS + S D G R W++ G PA K
Sbjct: 170 VSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKA 229
Query: 257 VLG-------------------ARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNASY 297
VLG A +G I+ DGS+GY IR FI + GA VYN++
Sbjct: 230 VLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVD--NGATTVYNSTV 287
Query: 298 VVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDDNWALSRAA 349
V + +G WI +D ++I K+ YAK++ LLGY ++ + DDN LSRAA
Sbjct: 288 VGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAA 339
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From
Nicotiana Tobaccum In Complex With Nag4
Length = 353
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 198/353 (56%), Gaps = 46/353 (13%)
Query: 28 IKAGYWLAGREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKN 87
+K GYW L++I+S LFTHL CAFA+++ QL IS NQ F F ++V+RKN
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63
Query: 88 PSIKTLLSIWNGQ-NSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQG 146
PS+KT LSI G+ NST I M + RKSFI+SSIR AR GF G
Sbjct: 64 PSVKTFLSIAGGRANSTAYGI-------------MARQPNSRKSFIDSSIRLARQLGFHG 110
Query: 147 IDLFWLWP-NSTDLNSLGILLDEWK------ASASDQPELTLSMAVRYSPTHETVSYPID 199
+DL W +P ++ D+ +LG LL+EW+ A S + L L+ AV SP ++YP++
Sbjct: 111 LDLDWQYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNYPVE 170
Query: 200 SMKKNLNWAHLVAYDYHMPS-KENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVL 258
S+ +NL+W +L+AYD++ P+ + T HA L++P +++S GI W++ G P KLVL
Sbjct: 171 SLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVL 230
Query: 259 G----------------------ARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNAS 296
G A S G DGSM Y IR +I A VYNA+
Sbjct: 231 GIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNAT 288
Query: 297 YVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDDNWALSRAA 349
V + SG+ WI++D +T++ K++Y K + LLGY A+ ++ D NW LSR A
Sbjct: 289 IVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTA 341
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana
Tobaccum
Length = 353
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 198/353 (56%), Gaps = 46/353 (13%)
Query: 28 IKAGYWLAGREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKN 87
+K GYW L++I+S LFTHL CAFA+++ QL IS NQ F F ++V+RKN
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63
Query: 88 PSIKTLLSIWNGQ-NSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQG 146
PS+KT LSI G+ NST I M + RKSFI+SSIR AR GF G
Sbjct: 64 PSVKTFLSIAGGRANSTAYGI-------------MARQPNSRKSFIDSSIRLARQLGFHG 110
Query: 147 IDLFWLWP-NSTDLNSLGILLDEWK------ASASDQPELTLSMAVRYSPTHETVSYPID 199
+DL W +P ++ D+ +LG LL+EW+ A S + L L+ AV SP ++YP++
Sbjct: 111 LDLDWEYPLSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNYPVE 170
Query: 200 SMKKNLNWAHLVAYDYHMPS-KENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVL 258
S+ +NL+W +L+AYD++ P+ + T HA L++P +++S GI W++ G P KLVL
Sbjct: 171 SLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSDGINAWIQAGVPTKKLVL 230
Query: 259 G----------------------ARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNAS 296
G A S G DGSM Y IR +I A VYNA+
Sbjct: 231 GIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNAT 288
Query: 297 YVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDDNWALSRAA 349
V + SG+ WI++D +T++ K++Y K + LLGY A+ ++ D NW LSR A
Sbjct: 289 IVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTA 341
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/233 (41%), Positives = 139/233 (59%), Gaps = 5/233 (2%)
Query: 408 STPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRL 467
PA E + L+ FS +++ A++NFS+ N LG GGFG VYKG L G AVKRL
Sbjct: 11 DVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL 70
Query: 468 SATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD-P 525
QG E +F+ EV + + H NLLR+ G+C E +L+Y Y+ N S+ L + P
Sbjct: 71 KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 130
Query: 526 IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585
+ LDW KR I G +GL YL ++ + ++IHRD+KA+NILLD E + DFG+AK
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 586 LFRKDVDEANTGRIV-GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKR 637
L D + + V GT G++ PEY+ G S K DV+ +GV+LL++I+ +R
Sbjct: 191 LM--DYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 138/233 (59%), Gaps = 5/233 (2%)
Query: 408 STPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRL 467
PA E + L+ FS +++ A++NF + N LG GGFG VYKG L G AVKRL
Sbjct: 3 DVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL 62
Query: 468 SATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD-P 525
TQG E +F+ EV + + H NLLR+ G+C E +L+Y Y+ N S+ L + P
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 526 IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585
+ LDW KR I G +GL YL ++ + ++IHRD+KA+NILLD E + DFG+AK
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 586 LFRKDVDEANTGRIV-GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKR 637
L D + + V G G++ PEY+ G S K DV+ +GV+LL++I+ +R
Sbjct: 183 LM--DYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 16/228 (7%)
Query: 417 SDTPNLQVFSFSDIKAATNNFSS------ANKLGEGGFGPVYKGNLPRGQEFAVKRLSA- 469
SDT FSF ++K TNNF NK+GEGGFG VYKG + AVK+L+A
Sbjct: 8 SDT-RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 65
Query: 470 ---TSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI 526
T+ + ++F E+ + A+ QH NL+ +LG+ ++ D+ L+Y Y+PN SL L
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L W R I +G G+ +L E + IHRD+K++NILLD KISDFG+A+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
K RIVGT Y+ PE + +G + K D+YSFGV+LL+II+
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 16/228 (7%)
Query: 417 SDTPNLQVFSFSDIKAATNNFSS------ANKLGEGGFGPVYKGNLPRGQEFAVKRLSA- 469
SDT FSF ++K TNNF NK+GEGGFG VYKG + AVK+L+A
Sbjct: 2 SDT-RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 59
Query: 470 ---TSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI 526
T+ + ++F E+ + A+ QH NL+ +LG+ ++ D+ L+Y Y+PN SL L
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L W R I +G G+ +L E + IHRD+K++NILLD KISDFG+A+
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
K RIVGT Y+ PE + +G + K D+YSFGV+LL+II+
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIIT 223
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 141/228 (61%), Gaps = 6/228 (2%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL 488
D++ ATNNF +G G FG VYKG L G + A+KR + S+QG+EEF+ E+ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF-DPIRRYVLDWQKRVNIIEGVTQGL 547
+H +L+ ++G+C ER+E +LIY+Y+ N +L +L+ + + W++R+ I G +GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV-GTYGYV 606
YL + +IHRD+K+ NILLD PKI+DFG++K ++D+ + +V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELDQTHLXXVVKGTLGYI 208
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYA 654
PEY KG + K DVYSFGV+L +++ ++ E +N E+A
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 131/228 (57%), Gaps = 16/228 (7%)
Query: 417 SDTPNLQVFSFSDIKAATNNFSS------ANKLGEGGFGPVYKGNLPRGQEFAVKRLSA- 469
SDT FSF ++K TNNF NK+GEGGFG VYKG + AVK+L+A
Sbjct: 8 SDT-RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 65
Query: 470 ---TSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI 526
T+ + ++F E+ + A+ QH NL+ +LG+ ++ D+ L+Y Y+PN SL L
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L W R I +G G+ +L E + IHRD+K++NILLD KISDFG+A+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
K RIVGT Y+ PE + +G + K D+YSFGV+LL+II+
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIIT 229
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 125/220 (56%), Gaps = 15/220 (6%)
Query: 425 FSFSDIKAATNNFSS------ANKLGEGGFGPVYKGNLPRGQEFAVKRLSA----TSTQG 474
FSF ++K TNNF NK GEGGFG VYKG + AVK+L+A T+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 475 LEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQ 534
++F E+ + A+ QH NL+ +LG+ ++ D+ L+Y Y PN SL L L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 535 KRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
R I +G G+ +L E + IHRD+K++NILLD KISDFG+A+ K
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
RIVGT Y PE + +G + K D+YSFGV+LL+II+
Sbjct: 182 XXSRIVGTTAYXAPEAL-RGEITPKSDIYSFGVVLLEIIT 220
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 140/228 (61%), Gaps = 6/228 (2%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL 488
D++ ATNNF +G G FG VYKG L G + A+KR + S+QG+EEF+ E+ +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF-DPIRRYVLDWQKRVNIIEGVTQGL 547
+H +L+ ++G+C ER+E +LIY+Y+ N +L +L+ + + W++R+ I G +GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV-GTYGYV 606
YL + +IHRD+K+ NILLD PKI+DFG++K ++ + + +V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKK-GTELGQTHLXXVVKGTLGYI 208
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYA 654
PEY KG + K DVYSFGV+L +++ ++ E +N E+A
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA 256
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Chitobiose
pdb|1LG2|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Ethylene Glycol
pdb|1LQ0|A Chain A, Crystal Structure Of Human Chitotriosidase At 2.2 Angstrom
Resolution
Length = 365
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 39 FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWN 98
F D++ +L THLI AFA + + +QLS + N + N +++ NP +KTLL+I
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAI-- 75
Query: 99 GQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156
G N + MV +++R++F+ S+IR R Y F G+DL W +P S
Sbjct: 76 ----------GGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQG 125
Query: 157 ---TDLNSLGILLD------EWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNW 207
D L+ + +A S + L LS AV T+ Y +D + +NL++
Sbjct: 126 SPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDF 185
Query: 208 AHLVAYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVLGAR 261
+L+AYD+H S E VTG ++ LY +++++ D +++WL++G PA+KL+LG
Sbjct: 186 VNLMAYDFH-GSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMP 244
Query: 262 ASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNA-----SYVVNLFTSGAT--------- 307
G T+ S R G G + +Y GAT
Sbjct: 245 TYGRSFTLASSSD---TRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV 301
Query: 308 --------WINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
W+ FD VE+ K K+SY K+K L G + L DD
Sbjct: 302 PYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Glucoallosamidin B
pdb|1HKJ|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Methylallosamidin
pdb|1HKM|A Chain A, High Resolution Crystal Structure Of Human Chitinase In
Complex With Demethylallosamidin
Length = 365
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 39 FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWN 98
F D++ +L THLI AFA + + +QLS + N + N +++ NP +KTLL+I
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAI-- 75
Query: 99 GQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156
G N + MV +++R++F+ S+IR R Y F G+DL W +P S
Sbjct: 76 ----------GGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQG 125
Query: 157 ---TDLNSLGILLD------EWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNW 207
D L+ + +A S + L LS AV T+ Y +D + +NL++
Sbjct: 126 SPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDF 185
Query: 208 AHLVAYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVLGAR 261
+L+AYD+H S E VTG ++ LY +++++ D +++WL++G PA+KL+LG
Sbjct: 186 VNLMAYDFH-GSWEKVTGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMP 244
Query: 262 ASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNA-----SYVVNLFTSGAT--------- 307
G T+ S R G G + +Y GAT
Sbjct: 245 TYGRSFTLASSSD---TRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV 301
Query: 308 --------WINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
W+ FD VE+ K K+SY K+K L G + L DD
Sbjct: 302 PYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In
Complex With Allosamidin
Length = 364
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 160/342 (46%), Gaps = 57/342 (16%)
Query: 39 FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWN 98
F D++ +L THLI AFA + + +QLS + N + N +++ NP +KTLL+I
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAI-- 75
Query: 99 GQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156
G N + MV +++R++F+ S+IR R Y F G+DL W +P S
Sbjct: 76 ----------GGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQG 125
Query: 157 ---TDLNSLGILLD------EWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNW 207
D L+ + +A S + L LS AV T+ Y +D + +NL++
Sbjct: 126 SPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDF 185
Query: 208 AHLVAYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVLGAR 261
+L+AYD+H S E VTG ++ LY +++++ D +++WL++G PA+KL+LG
Sbjct: 186 VNLMAYDFH-GSWEKVTGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMP 244
Query: 262 ASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNA-----SYVVNLFTSGAT--------- 307
G T+ S R G G + +Y GAT
Sbjct: 245 TYGRSFTLASSSD---TRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV 301
Query: 308 --------WINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
W+ FD VE+ K K+SY K+K L G + L DD
Sbjct: 302 PYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase
Length = 366
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 39 FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWN 98
F D++ +L THLI AFA + + +QLS + N + N +++ NP +KTLL+I
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAI-- 75
Query: 99 GQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156
G N + MV +++R++F+ S+IR R Y F G+DL W +P S
Sbjct: 76 ----------GGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQG 125
Query: 157 ---TDLNSLGILLD------EWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNW 207
D L+ + +A S + L LS AV T+ Y +D + +NL++
Sbjct: 126 SPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDF 185
Query: 208 AHLVAYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVLGAR 261
+L+AYD+H S E VTG ++ LY +++++ D +++WL +G PA+KL+LG
Sbjct: 186 VNLMAYDFH-GSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLEKGTPASKLILGMP 244
Query: 262 ASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNA-----SYVVNLFTSGAT--------- 307
G T+ S R G G + +Y GAT
Sbjct: 245 TYGRSFTLASSSD---TRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKV 301
Query: 308 --------WINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
W+ FD VE+ K K+SY K+K L G + L DD
Sbjct: 302 PYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Human
Chitinase
pdb|1WB0|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argifin Against Human
Chitinase
Length = 445
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 159/338 (47%), Gaps = 57/338 (16%)
Query: 43 DINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNS 102
D++ +L THLI AFA + + +QLS + N + N +++ NP +KTLL+I
Sbjct: 24 DLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAI------ 75
Query: 103 TYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-----T 157
G N + MV +++R++F+ S+IR R Y F G+DL W +P S
Sbjct: 76 ------GGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAV 129
Query: 158 DLNSLGILLD------EWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLV 211
D L+ + +A S + L LS AV T+ Y +D + +NL++ +L+
Sbjct: 130 DKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLM 189
Query: 212 AYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVLGARASGP 265
AYD+H S E VTG ++ LY +++++ D +++WL++G PA+KL+LG G
Sbjct: 190 AYDFHG-SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGR 248
Query: 266 GITIDGSMGYKFIRAFIQNYGYGAAPVYNA-----SYVVNLFTSGAT------------- 307
T+ S R G G + +Y GAT
Sbjct: 249 SFTLASSSD---TRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPYIF 305
Query: 308 ----WINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
W+ FD VE+ K K+SY K+K L G + L DD
Sbjct: 306 RDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDD 343
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From
Porcine (spp-40) At 2.89a Resolution
pdb|1XRV|A Chain A, Crystal Structure Of The Novel Secretory Signalling
Protein From Porcine (Spp-40) At 2.1a Resolution.
pdb|1ZBC|A Chain A, Crystal Structure Of The Porcine Signalling Protein
Liganded With The Peptide Trp-Pro-Trp (Wpw) At 2.3 A
Resolution
pdb|1ZB5|A Chain A, Recognition Of Peptide Ligands By Signalling Protein From
Porcine Mammary Gland (Spp-40): Crystal Structure Of The
Complex Of Spp-40 With A Peptide Trp-Pro-Trp At 2.45a
Resolution
Length = 361
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 149/339 (43%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP + I+ L TH+I +FA + S ++ N N+++ +NP++KTLLS
Sbjct: 18 GSCFPDA-IDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPNLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N P S + + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGPQRFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKA-----SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + +L LS AV Y I + ++L++ L
Sbjct: 123 RRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ + S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFRGQEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGK 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G + Y I F+Q GA V
Sbjct: 242 SFTLASSKTDVGAPVSGPGIPGQFTKEKGILAYYEICDFLQ----GATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40
In The Presense Of N,n',n''-triacetyl-chitotriose At
2.6a Resolution
Length = 361
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 149/339 (43%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP I+ L TH+I +FA + S ++ N N+++ +NP +KTLLS
Sbjct: 18 GSCFP-DAIDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPKLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N P S + + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKASASDQPE-----LTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + + L LS AV Y I + ++L++ L
Sbjct: 123 RRDKRHLTALVKEMKAEFAREAQAGTERLLLSAAVSAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ +S+ S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFRGNSDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G + Y I F+ +GA V
Sbjct: 242 SFTLASSKTDGGAPISGPGIPGRFTKEKGILAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40)
Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a
Resolution
pdb|1ZBW|A Chain A, Crystal Structure Of The Complex Formed Between Signalling
Protein From Goat Mammary Gland (Spg-40) And A
Tripeptide Trp-Pro-Trp At 2.8a Resolution
pdb|1ZU8|A Chain A, Crystal Structure Of The Goat Signalling Protein With A
Bound Trisaccharide Reveals That Trp78 Reduces The
Carbohydrate Binding Site To Half
pdb|2AOS|A Chain A, Protein-protein Interactions Of Protective Signalling
Factor: Crystal Structure Of Ternary Complex Involving
Signalling Protein From Goat (spg-40), Tetrasaccharide
And A Tripeptide Trp-pro-trp At 2.9 A Resolution
pdb|2B31|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 3.1 A
Resolution Reveals Large Scale Conformational Changes In
The Residues Of Tim Barrel
pdb|2DSZ|A Chain A, Three Dimensional Structure Of A Goat Signalling Protein
Secreted During Involution
pdb|2DT0|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With The Trimer Of N-acetylglucosamine At 2.45a
Resolution
pdb|2DT1|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With Tetrasaccharide At 2.09 A Resolution
pdb|2DT2|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 2.9a
Resolution
pdb|2DT3|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein And The Hexasaccharide At 2.28 A
Resolution
pdb|2O92|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Tetrasaccharide At 3.0a Resolution
pdb|2OLH|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Cellobiose At 2.78 A Resolution
Length = 361
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 149/339 (43%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP I+ L TH+I +FA + S ++ N N+++ +NP +KTLLS
Sbjct: 18 GSCFP-DAIDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPKLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N P S + + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKASASDQPE-----LTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + + L LS AV Y I + ++L++ L
Sbjct: 123 RRDKRHLTALVKEMKAEFAREAQAGTERLLLSAAVSAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ +S+ S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFRGNSDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G + Y I F+ +GA V
Sbjct: 242 SFTLASSKTDVGAPISGPGIPGRFTKEKGILAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary
Gland Protein (Mgp-40) Secreted During Involution
Length = 361
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 151/339 (44%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP + I+ L TH+I +FA + S ++ N N+++ +NP +KTLLS
Sbjct: 18 GSCFPDA-IDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPKLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N P S++ + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGPERFSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKASASDQPE-----LTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + + L LS AV Y I + ++L++ L
Sbjct: 123 RRDKRHLTALVKEMKAEFAREAQAGTERLLLSAAVSAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ +S+ S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G + Y I F+ +GA V
Sbjct: 242 SFTLASSKTDGGAPISGPGIPGRFTKEKGILAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein
(Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a
Resolution Reveals Specific Binding Characteristics Of
Sps-40
Length = 361
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 147/339 (43%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP I+ L TH+I FA + S ++ N N+++ +NP +KTLLS
Sbjct: 18 GSCFP-DAIDPFLCTHVIYTFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPKLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N P S + + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKA-----SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + +L LS AV Y I + ++L++ L
Sbjct: 123 RRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ + + S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G + Y I F+ +GA V
Sbjct: 242 SFTLASSKTDVGAPVSGPGIPGRFTKEKGILAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40)
At 3.0a Resolution Using Crystal Grown In The Presence
Of Polysaccharides
pdb|1ZBK|A Chain A, Recognition Of Specific Peptide Sequences By Signalling
Protein From Sheep Mammary Gland (Sps-40): Crystal
Structure Of The Complex Of Sps-40 With A Peptide
Trp-Pro-Trp At 2.9a Resolution
pdb|1ZL1|A Chain A, Crystal Structure Of The Complex Of Signalling Protein
From Sheep (Sps-40) With A Designed Peptide Trp-His-Trp
Reveals Significance Of Asn79 And Trp191 In The Complex
Formation
pdb|2FDM|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Glycoprotein Frm Sheep (Sps-40)with Hexasaccharide
(Nag6) And Peptide Trp-Pro-Trp At 3.0a Resolution
pdb|2G41|A Chain A, Crystal Structure Of The Complex Of Sheep Signalling
Glycoprotein With Chitin Trimer At 3.0a Resolution
pdb|2G8Z|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Protein From Sheep (Sps-40) With Trimer And Designed
Peptide At 2.5a Resolution
pdb|2DPE|A Chain A, Crystal Structure Of A Secretory 40kda Glycoprotein From
Sheep At 2.0a Resolution
pdb|2DSU|A Chain A, Binding Of Chitin-Like Polysaccharide To Protective
Signalling Factor: Crystal Structure Of The Complex
Formed Between Signalling Protein From Sheep (Sps-40)
With A Tetrasaccharide At 2.2 A Resolution
pdb|2DSV|A Chain A, Interactions Of Protective Signalling Factor With
Chitin-like Polysaccharide: Crystal Structure Of The
Complex Between Signalling Protein From Sheep (sps-40)
And A Hexasaccharide At 2.5a Resolution
pdb|2DSW|A Chain A, Binding Of Chitin-Like Polysaccharides To Protective
Signalling Factor: Crystal Structure Of The Complex Of
Signalling Protein From Sheep (Sps-40) With A
Pentasaccharide At 2.8 A Resolution
Length = 361
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 149/339 (43%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP I+ L TH+I +FA + S ++ N N+++ +NP +KTLLS
Sbjct: 18 GSCFP-DAIDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPKLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N P S++ + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGPERFSAIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKA-----SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + +L LS AV Y I + ++L++ L
Sbjct: 123 RRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ + + S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFAGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPG+ G + Y I F+ +GA V
Sbjct: 242 SFTLASSKTDVGAPVSGPGVPGRFTKEKGILAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein
(Spb-40) Secreted During Involution
pdb|2O9O|A Chain A, Crystal Structure Of The Buffalo Secretory Signalling
Glycoprotein At 2.8 A Resolution
pdb|2QF8|A Chain A, Crystal Structure Of The Complex Of Buffalo Secretory
Glycoprotein With Tetrasaccharide At 2.8a Resolution
Length = 361
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 151/336 (44%), Gaps = 47/336 (13%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP I+ L TH+I +FA + S ++ N N+++ +NP++KTLLS
Sbjct: 18 GSCFP-DAIDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPNLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N S + + R++FI+S R +GF G+DL WLWP
Sbjct: 75 V------------GGWNYGSQRFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLWPG 122
Query: 156 STDLNSLGILLDEWKA-----SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + +L LS AV Y I + ++L++ L
Sbjct: 123 WRDKRHLTTLVKEMKAEFVREAQAGTEQLLLSAAVTAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H ++ V G H+ L+ + + S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGAWRQTV-GHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGITIDGSMGYKFIRAF--IQNYGYGAAPVYNASYVVNLFTSG 305
GA SGPGI + +K I A+ I ++ +GA V T G
Sbjct: 242 SYTLASSKTDVGAPISGPGIPGRFTK-WKGILAYYEICDFLHGATTHRFRDQQVPYATKG 300
Query: 306 ATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
W+ +D E++K K Y K + L G + L DD
Sbjct: 301 NQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|C Chain C, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|D Chain D, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJW|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJW|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJX|A Chain A, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|B Chain B, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|C Chain C, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|D Chain D, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1NWR|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWS|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWT|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWU|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
Length = 362
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 151/340 (44%), Gaps = 54/340 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP ++ L TH+I +FA + S + N N+++ +NP++KTLLS
Sbjct: 18 GSCFP-DALDRFLCTHIIYSFANI--SNDHIDTWEWNDVTLYGMLNTLKNRNPNLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N S + ++ R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGSQRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKAS--ASDQP---ELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L+ E KA QP +L LS A+ SY I + ++L++ +
Sbjct: 123 RRDKQHFTTLIKEMKAEFIKEAQPGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISI 182
Query: 211 VAYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVL------ 258
+ YD+H + TG H+ L+ +P +TD+ + LR G PA+KLV+
Sbjct: 183 MTYDFH-GAWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFG 241
Query: 259 ------------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNL 301
GA SGPGI G++ Y I F++ GA V
Sbjct: 242 RSFTLASSETGVGAPISGPGIPGRFTKEAGTLAYYEICDFLR----GATVHRILGQQVPY 297
Query: 302 FTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K+K+ Y K++ L G + L DD
Sbjct: 298 ATKGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDD 337
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40)
Secreted During Involution
Length = 361
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 150/339 (44%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP + I+ L TH+I +FA + S ++ N N+++ +NP++KTLLS
Sbjct: 18 GSCFPDA-IDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPNLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N S + + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGSERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKA-----SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + +L LS AV Y I + ++L++ L
Sbjct: 123 WRDKRHLTTLVKEMKAEFVREAQAGTEQLLLSAAVPAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H + V G H+ L+ +S+ S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGGWRGTV-GHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G++ Y I F+ +GA V
Sbjct: 242 SYTLASSKTDVGAPISGPGIPGQFTKEKGTLAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling
Protein From Bovine (Spc-40) At 2.1 A Resolution
Length = 361
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 148/339 (43%), Gaps = 53/339 (15%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
G FP I+ L TH+I +FA + S ++ N N+++ +NP++KTLLS
Sbjct: 18 GSCFP-DAIDPFLCTHVIYSFANI--SNNEIDTWEWNDVTLYDTLNTLKNRNPNLKTLLS 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
+ G N S + + R++FI+S R +GF G+DL WL+P
Sbjct: 75 V------------GGWNFGSERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG 122
Query: 156 STDLNSLGILLDEWKA-----SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHL 210
D L L+ E KA + + +L LS AV Y I + ++L++ L
Sbjct: 123 WRDKRHLTTLVKEMKAEFVREAQAGTEQLLLSAAVTAGKIAIDRGYDIAQISRHLDFISL 182
Query: 211 VAYDYHMPSKENVTGIHAALYNPSSNIST-----DFGIREWLRRGFPANKLVL------- 258
+ YD+H + V G H+ L+ +S+ S+ D+ + LR G PANKLV+
Sbjct: 183 LTYDFHGGWRGTV-GHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFGR 241
Query: 259 -----------GARASGPGI-----TIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF 302
GA SGPGI G + Y I F+ +GA V
Sbjct: 242 SYTLASSSTRVGAPISGPGIPGQFTKEKGILAYYEICDFL----HGATTHRFRDQQVPYA 297
Query: 303 TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
T G W+ +D E++K K Y K + L G + L DD
Sbjct: 298 TKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDD 336
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|B Chain B, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|C Chain C, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|D Chain D, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|E Chain E, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|F Chain F, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|G Chain G, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|H Chain H, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|I Chain I, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|J Chain J, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|K Chain K, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|L Chain L, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
Length = 365
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 154/340 (45%), Gaps = 54/340 (15%)
Query: 38 EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIW 97
+F +I+ L +HLI +FA ++++ + S Y +I NS++ KNP +K LLSI
Sbjct: 20 KFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEVMLYQTI--NSLKTKNPKLKILLSIG 77
Query: 98 NGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNST 157
+ G+K +P MV S+ R FI S I R + F G+D+ W++P+
Sbjct: 78 G-------YLFGSKGFHP-----MVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQK 125
Query: 158 DLNSLGILLDEWKA------SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLV 211
+ +L+ E + S + L L+ V SY ++ + K+L++ +L+
Sbjct: 126 ENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLL 185
Query: 212 AYDYHMP-SKENVTGIHAAL------YNPSSNISTDFGIREWLRRGFPANKLVL------ 258
++D+H K +TG ++ L PSS + ++ + W+ +G P+ K+V+
Sbjct: 186 SFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYG 245
Query: 259 ------------GARASGPGIT-----IDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNL 301
GA ASGPG G + Y I F++ GA V
Sbjct: 246 HSFTLASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLK----GAKITRLQDQQVPY 301
Query: 302 FTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
G W+ +D V++++ K+ + K NL G + + DD
Sbjct: 302 AVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDD 341
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 125/248 (50%), Gaps = 21/248 (8%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-- 454
G +L+ PG T + D P V F+ ATN S +G G FG V G
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFED-PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRL 66
Query: 455 NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
LP +E A+K L T+ +F E S+ + H N++R+ G T+ M++ E
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
Y+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NIL++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG+A++ D + A T R G +P PE + ++ DV+S+G
Sbjct: 182 SNLVCKVSDFGLARVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 627 VLLLQIIS 634
++L +++S
Sbjct: 238 IVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 27/251 (10%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDT---PNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYK 453
G +L+ PG T Y D T P V F+ ATN S +G G FG V
Sbjct: 9 FGNGHLKLPGLRT----YVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCS 63
Query: 454 G--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENML 508
G LP +E A+K L T+ +F E S+ + H N++R+ G T+ M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNI 568
+ EY+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NI
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI 178
Query: 569 LLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVY 623
L+++ L K+SDFG++++ D + A T R G +P PE + ++ DV+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 624 SFGVLLLQIIS 634
S+G++L +++S
Sbjct: 235 SYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 27/251 (10%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDT---PNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYK 453
G +L+ PG T Y D T P V F+ ATN S +G G FG V
Sbjct: 7 FGNGHLKLPGLRT----YVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCS 61
Query: 454 G--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENML 508
G LP +E A+K L T+ +F E S+ + H N++R+ G T+ M+
Sbjct: 62 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 121
Query: 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNI 568
+ EY+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NI
Sbjct: 122 VTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI 176
Query: 569 LLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVY 623
L+++ L K+SDFG++++ D + A T R G +P PE + ++ DV+
Sbjct: 177 LINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVW 232
Query: 624 SFGVLLLQIIS 634
S+G++L +++S
Sbjct: 233 SYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 27/251 (10%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDT---PNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYK 453
G +L+ PG T Y D T P V F+ ATN S +G G FG V
Sbjct: 9 FGNGHLKLPGLRT----YVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCS 63
Query: 454 G--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENML 508
G LP +E A+K L T+ +F E S+ + H N++R+ G T+ M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNI 568
+ EY+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NI
Sbjct: 124 VTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI 178
Query: 569 LLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVY 623
L+++ L K+SDFG++++ D + A T R G +P PE + ++ DV+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 624 SFGVLLLQIIS 634
S+G++L +++S
Sbjct: 235 SYGIVLWEVMS 245
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L I + K ++I
Sbjct: 62 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQT 118
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
QG+ YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+
Sbjct: 119 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 176 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 58
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L I + K ++I
Sbjct: 59 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQT 115
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
QG+ YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+
Sbjct: 116 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 173 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 9/214 (4%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLT 485
S D + + ++G G FG VYKG + ++A + Q L+ FKNEV +
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ +HVN+L +GY T + + ++ ++ SL +L I + K ++I Q
Sbjct: 64 RKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQ 120
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
G+ YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+ +
Sbjct: 121 GMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 606 VPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
+ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 9/211 (4%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL 488
D + + ++G G FG VYKG + ++A + Q L+ FKNEV + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLL 548
+HVN+L +GY T + + ++ ++ SL +L I + K ++I QG+
Sbjct: 62 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 118
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+ ++ P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
Query: 609 EYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
E ++ K YS + DVY+FG++L ++++ +
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L I + K ++I
Sbjct: 84 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQT 140
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
QG+ YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+
Sbjct: 141 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 198 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L I + K ++I
Sbjct: 85 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQT 141
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
QG+ YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 21/248 (8%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-- 454
G +L+ PG T + D P V F+ ATN S +G G FG V G
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFED-PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRL 66
Query: 455 NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
LP +E A+K L T+ +F E S+ + H N++R+ G T+ M++ E
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
Y+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NIL++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILIN 181
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG++++ D + A T R G +P PE + ++ DV+S+G
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 627 VLLLQIIS 634
++L +++S
Sbjct: 238 IVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 21/248 (8%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-- 454
G +L+ PG T + D P V F+ ATN S +G G FG V G
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFED-PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRL 66
Query: 455 NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
LP +E A+K L T+ +F E S+ + H N++R+ G T+ M++ E
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
Y+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NIL++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG++++ D + A T R G +P PE + ++ DV+S+G
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 627 VLLLQIIS 634
++L +++S
Sbjct: 238 IVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 21/248 (8%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-- 454
G +L+ PG T + D P V F+ ATN S +G G FG V G
Sbjct: 9 FGNGHLKLPGLRTFVDPHTYED-PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRL 66
Query: 455 NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
LP +E A+K L T+ +F E S+ + H N++R+ G T+ M++ E
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
Y+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NIL++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG++++ D + A T R G +P PE + ++ DV+S+G
Sbjct: 182 SNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 627 VLLLQIIS 634
++L +++S
Sbjct: 238 IVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 124/248 (50%), Gaps = 21/248 (8%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-- 454
G +L+ PG T + D P V F+ ATN S +G G FG V G
Sbjct: 9 FGNGHLKLPGLRTFVDPHTFED-PTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRL 66
Query: 455 NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
LP +E A+K L T+ +F E S+ + H N++R+ G T+ M++ E
Sbjct: 67 KLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
Y+ N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NIL++
Sbjct: 127 YMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILIN 181
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG+ ++ D + A T R G +P PE + ++ DV+S+G
Sbjct: 182 SNLVCKVSDFGLGRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYG 237
Query: 627 VLLLQIIS 634
++L +++S
Sbjct: 238 IVLWEVMS 245
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 113/213 (53%), Gaps = 13/213 (6%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTA 486
D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 487 RLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ +HVN+L +GY T + ++ ++ SL +L I + K ++I QG
Sbjct: 60 KTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQG 116
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ YL S +IHRDLK++NI L +L KI DFG+A + + ++ G+ ++
Sbjct: 117 MDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 607 PPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 174 APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L I + K ++I
Sbjct: 77 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQT 133
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
QG+ YL S +IHRDLK++NI L +L KI DFG+A + ++ G+
Sbjct: 134 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 191 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L I + K ++I
Sbjct: 85 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQT 141
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
QG+ YL S +IHRDLK++NI L +L KI DFG+A + ++ G+
Sbjct: 142 AQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ K YS + DVY+FG++L ++++ +
Sbjct: 199 LWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 9/211 (4%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL 488
D + + ++G G FG VYKG + ++A + Q L+ FKNEV + +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLL 548
+HVN+L +GY T + + ++ ++ SL +L I + K ++I QG+
Sbjct: 62 RHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLH--IIETKFEMIKLIDIARQTAQGMD 118
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
YL S +IHRDLK++NI L +L KI DFG+A + ++ G+ ++ P
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
Query: 609 EYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
E ++ K YS + DVY+FG++L ++++ +
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|B Chain B, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|C Chain C, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|D Chain D, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FY1|A Chain A, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3FY1|B Chain B, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3RM4|A Chain A, Amcase In Complex With Compound 1
pdb|3RM4|B Chain B, Amcase In Complex With Compound 1
pdb|3RM8|A Chain A, Amcase In Complex With Compound 2
pdb|3RM8|B Chain B, Amcase In Complex With Compound 2
pdb|3RM9|A Chain A, Amcase In Complex With Compound 3
pdb|3RM9|B Chain B, Amcase In Complex With Compound 3
pdb|3RME|A Chain A, Amcase In Complex With Compound 5
pdb|3RME|B Chain B, Amcase In Complex With Compound 5
Length = 395
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 147/347 (42%), Gaps = 60/347 (17%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
GR P DIN L THLI AFA + ++ +++ N N ++ KN +KTLL+
Sbjct: 18 GRFMP-DDINPCLCTHLIYAFAGMQNN--EITTIEWNDVTLYQAFNGLKNKNSQLKTLLA 74
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
I G N + ++MV +R++FI S I+ R Y F G+D W +P
Sbjct: 75 I------------GGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPG 122
Query: 156 S-----TDLNSLGILLDEWK------ASASDQPELTLSMAVRYSPTHETVSYPIDSMKKN 204
S D + +L+ E + A ++P L ++ AV ++ Y I + +
Sbjct: 123 SRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQY 182
Query: 205 LNWAHLVAYDYHMPSKENVTGIHAALYNPSSN------ISTDFGIREWLRRGFPANKLVL 258
L++ H++ YD H S E TG ++ LY ++ ++ D+ + W G PA KL++
Sbjct: 183 LDYIHVMTYDLHG-SWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIV 241
Query: 259 ------------------------GARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYN 294
GA +GP G Y I F++N GA ++
Sbjct: 242 GFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWD 298
Query: 295 ASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
A V G W+ +D V++ K + K G + + DD
Sbjct: 299 APQEVPYAYQGNVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDD 345
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBU|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
Length = 381
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 147/347 (42%), Gaps = 60/347 (17%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLS 95
GR P DIN L THLI AFA + ++ +++ N N ++ KN +KTLL+
Sbjct: 22 GRFMP-DDINPCLCTHLIYAFAGMQNN--EITTIEWNDVTLYQAFNGLKNKNSQLKTLLA 78
Query: 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN 155
I G N + ++MV +R++FI S I+ R Y F G+D W +P
Sbjct: 79 I------------GGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPG 126
Query: 156 S-----TDLNSLGILLDEWK------ASASDQPELTLSMAVRYSPTHETVSYPIDSMKKN 204
S D + +L+ E + A ++P L ++ AV ++ Y I + +
Sbjct: 127 SRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISNIQSGYEIPQLSQY 186
Query: 205 LNWAHLVAYDYHMPSKENVTGIHAALYNPSSN------ISTDFGIREWLRRGFPANKLVL 258
L++ H++ YD H S E TG ++ LY ++ ++ D+ + W G PA KL++
Sbjct: 187 LDYIHVMTYDLHG-SWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIV 245
Query: 259 ------------------------GARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYN 294
GA +GP G Y I F++N GA ++
Sbjct: 246 GFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWD 302
Query: 295 ASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
A V G W+ +D +++ K + K G + + DD
Sbjct: 303 APQEVPYAYQGNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDD 349
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 27/251 (10%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDT---PNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYK 453
G +L+ PG T Y D T P V F+ ATN S +G G FG V
Sbjct: 9 FGNGHLKLPGLRT----YVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCS 63
Query: 454 G--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENML 508
G LP +E A+K L T+ +F E S+ + H N++R+ G T+ M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNI 568
+ E + N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NI
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNI 178
Query: 569 LLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVY 623
L+++ L K+SDFG++++ D + A T R G +P PE + ++ DV+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 624 SFGVLLLQIIS 634
S+G++L +++S
Sbjct: 235 SYGIVLWEVMS 245
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 125/251 (49%), Gaps = 27/251 (10%)
Query: 397 LGRRNLRTPGTSTPAAEYFDSDT---PNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYK 453
G +L+ PG T + D T P V F+ ATN S +G G FG V
Sbjct: 9 FGNGHLKLPGLRT----FVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCS 63
Query: 454 G--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENML 508
G LP +E A+K L T+ +F E S+ + H N++R+ G T+ M+
Sbjct: 64 GRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123
Query: 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNI 568
+ E + N SLD +L ++ + + V ++ G+ G+ YL S+ +HRDL A NI
Sbjct: 124 VTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL---SDMGAVHRDLAARNI 178
Query: 569 LLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVY 623
L+++ L K+SDFG++++ D + A T R G +P PE + ++ DV+
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVW 234
Query: 624 SFGVLLLQIIS 634
S+G++L +++S
Sbjct: 235 SYGIVLWEVMS 245
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1
Suggests A Saccharide Binding Site
pdb|1VF8|A Chain A, The Crystal Structure Of Ym1 At 1.31 A Resolution
Length = 377
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 146/344 (42%), Gaps = 59/344 (17%)
Query: 39 FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWN 98
F +I+ L THLI AFA + ++ + + Y ++ N ++ KN +KTLL+I
Sbjct: 20 FKPGNIDPCLCTHLIYAFAGMQNNEITYTHEQDLRDYEAL--NGLKDKNTELKTLLAI-- 75
Query: 99 GQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156
G P+ S+MV +R+ FI+S IR R Y F G++L W +P S
Sbjct: 76 ----------GGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRG 125
Query: 157 ---TDLNSLGILLDEWKAS------ASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNW 207
D + +L+ E + + D P L L+ Y I + ++L++
Sbjct: 126 SPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDVIKSGYKIPELSQSLDY 185
Query: 208 AHLVAYDYHMPSKENVTGIHAALY------NPSSNISTDFGIREWLRRGFPANKLVLGAR 261
++ YD H P K+ TG ++ LY S++++ D I W G + KL++G
Sbjct: 186 IQVMTYDLHDP-KDGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFP 244
Query: 262 ASG----------------------PGITID--GSMGYKFIRAFIQNYGYGAAPVYNASY 297
A G PG D G + Y + F+ GA V++A
Sbjct: 245 AYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNE---GATEVWDAPQ 301
Query: 298 VVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
V G W+ +D V + K K + K+ NL G + L DD
Sbjct: 302 EVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDD 345
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 114/227 (50%), Gaps = 12/227 (5%)
Query: 416 DSDTPNLQVFSFS------DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSA 469
D D P + F D+ + + K+G G FG V++ G + AVK L
Sbjct: 12 DYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILME 70
Query: 470 TS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR 527
+ + EF EV++ RL+H N++ +G T+ ++ EYL SL L
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
R LD ++R+++ V +G+ YL N ++HRDLK+ N+L+D + K+ DFG+++L
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL- 188
Query: 588 RKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
K + GT ++ PE ++ + K DVYSFGV+L ++ +
Sbjct: 189 -KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 120/231 (51%), Gaps = 22/231 (9%)
Query: 415 FDSDTPNLQVFSFS-DIKAATNNFSSANKLGEGGFGPVYKGNL--PRGQEF--AVKRLSA 469
F + PN V F+ +I A+ +G G FG V G L P +E A+K L A
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKV--IGVGEFGEVCSGRLKVPGKREICVAIKTLKA 67
Query: 470 TST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR 528
T + +F +E S+ + H N++ + G T+ M+I EY+ N SLD +L R
Sbjct: 68 GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR 127
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
+ + + V ++ G+ G+ YL S+ +HRDL A NIL+++ L K+SDFGM+++
Sbjct: 128 FTV--IQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE 182
Query: 589 KDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + A T R G +P PE + ++ DV+S+G+++ +++S
Sbjct: 183 DDPEAAYTTR----GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 115/227 (50%), Gaps = 12/227 (5%)
Query: 416 DSDTPNLQVFSFS------DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSA 469
D D P + F D+ + + K+G G FG V++ G + AVK L
Sbjct: 12 DYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILME 70
Query: 470 TS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR 527
+ + EF EV++ RL+H N++ +G T+ ++ EYL SL L
Sbjct: 71 QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA 130
Query: 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
R LD ++R+++ V +G+ YL N ++HR+LK+ N+L+D + K+ DFG+++L
Sbjct: 131 REQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL- 188
Query: 588 RKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
K ++ GT ++ PE ++ + K DVYSFGV+L ++ +
Sbjct: 189 -KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 19/210 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKG--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQ 489
N S +G G FG V G LP +E A+K L T+ +F E S+ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++R+ G T+ M++ EY+ N SLD +L ++ + + V ++ G+ G+ Y
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKY 133
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L S+ +HRDL A NIL+++ L K+SDFG++++ D + A T R G +P
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIR 186
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + ++ DV+S+G++L +++S
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 19/210 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKG--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQ 489
N S +G G FG V G LP +E A+K L T+ +F E S+ +
Sbjct: 33 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 92
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++R+ G T+ M++ EY+ N SLD +L ++ + + V ++ G+ G+ Y
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKY 150
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L S+ +HRDL A NIL+++ L K+SDFG++++ D + A T R G +P
Sbjct: 151 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIR 203
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + ++ DV+S+G++L +++S
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 19/202 (9%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVL 497
+G G G V G L R A+K L A T+ +F +E S+ + H N++R+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T M++ EY+ N SLD +L ++ + + V ++ GV G+ YL S+
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HRDL A N+L+D+ L K+SDFG++++ D D A T T G +P PE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT----TTGGKIPIRWTAPEAIA 227
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
+S DV+SFGV++ ++++
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L ++ + +K ++I
Sbjct: 61 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQT 117
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
+G+ YL S +IHRDLK++NI L + KI DFG+A + + ++ G+
Sbjct: 118 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ YS + DVY+FG++L ++++ +
Sbjct: 175 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 77
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 78 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 132
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 191
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 192 SDVWSFGILLTEIVTHGR 209
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 131
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 190
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 78
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 79 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 133
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 192
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 193 SDVWSFGILLTEIVTHGR 210
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 19/202 (9%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVL 497
+G G G V G L R A+K L A T+ +F +E S+ + H N++R+
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T M++ EY+ N SLD +L ++ + + V ++ GV G+ YL S+
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLG 171
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HRDL A N+L+D+ L K+SDFG++++ D D A T T G +P PE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT----TTGGKIPIRWTAPEAIA 227
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
+S DV+SFGV++ ++++
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 85
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 86 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 140
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 199
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 200 SDVWSFGILLTEIVTHGR 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 84
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 85 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 139
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 198
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 199 SDVWSFGILLTEIVTHGR 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 131
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 190
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 82
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 137
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYGTFTIK 196
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 76
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 77 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 131
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIK 190
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 191 SDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 71
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 72 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 126
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIK 185
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 186 SDVWSFGILLTEIVTHGR 203
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 82
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 83 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 137
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIK 196
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 197 SDVWSFGILLTEIVTHGR 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVS 483
S D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +HVN+L +GY T + + ++ ++ SL +L ++ + +K ++I
Sbjct: 73 VLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQT 129
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
+G+ YL S +IHRDLK++NI L + KI DFG+A + ++ G+
Sbjct: 130 ARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI 186
Query: 604 GYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
++ PE ++ YS + DVY+FG++L ++++ +
Sbjct: 187 LWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 81
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 82 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 136
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIK 195
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 196 SDVWSFGILLTEIVTHGR 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 86
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 87 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 141
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIK 200
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 201 SDVWSFGILLTEIVTHGR 218
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 19/202 (9%)
Query: 443 LGEGGFGPVYKGNL--PRGQEF--AVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVL 497
+G G FG V G L P +E A+K L A T + +F +E S+ + H N++ +
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T+ M+I EY+ N SLD +L R+ + + V ++ G+ G+ YL S+
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMS 130
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HRDL A NIL+++ L K+SDFGM+++ D + A T R G +P PE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIA 186
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ DV+S+G+++ +++S
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 19/202 (9%)
Query: 443 LGEGGFGPVYKGNL--PRGQEF--AVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVL 497
+G G FG V G L P +E A+K L A T + +F +E S+ + H N++ +
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T+ M+I EY+ N SLD +L R+ + + V ++ G+ G+ YL S+
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV--IQLVGMLRGIGSGMKYL---SDMS 136
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HRDL A NIL+++ L K+SDFGM+++ D + A T R G +P PE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR----GGKIPIRWTAPEAIA 192
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ DV+S+G+++ +++S
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMS 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKG--NLPRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQ 489
N S +G G FG V G LP +E A+K L T+ +F E S+ +
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 75
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++R+ G T+ M++ E + N SLD +L ++ + + V ++ G+ G+ Y
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKY 133
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L S+ +HRDL A NIL+++ L K+SDFG++++ D + A T R G +P
Sbjct: 134 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIPIR 186
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + ++ DV+S+G++L +++S
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 119/228 (52%), Gaps = 22/228 (9%)
Query: 418 DTPNLQVFSFS-DIKAATNNFSSANKLGEGGFGPVYKG--NLPRGQEF--AVKRLSATST 472
+ PN V F+ +I+A+ +G G FG V G LP +E A+K L T
Sbjct: 6 EDPNQAVHEFAKEIEASCITIERV--IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 473 QGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVL 531
+ +F E S+ + H N++ + G T+ M++ EY+ N SLD +L ++ +
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 532 DWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
+ V ++ G++ G+ YL S+ +HRDL A NIL+++ L K+SDFG++++ D
Sbjct: 124 --IQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 592 DEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ A T R G +P PE + ++ DV+S+G+++ +++S
Sbjct: 179 EAAYTTR----GGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 31/218 (14%)
Query: 441 NKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQGL-EEFKNEVSLTARLQHVNL 493
+LGE FG VYKG+L + Q A+K L + L EEF++E L ARLQH N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLF-------------DPIRRYVLDWQKRVNII 540
+ +LG T+ +I+ Y + L +L D + L+ V+++
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ G+ YL S+ V+H+DL N+L+ ++LN KISD G LFR +V A+ +++
Sbjct: 152 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLG---LFR-EVYAADYYKLL 204
Query: 601 G----TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + G +S+ D++S+GV+L ++ S
Sbjct: 205 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTA 486
D + + ++G G FG VYKG + AVK L+ T + Q L+ FKNEV +
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 487 RLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ +HVN+L +GY T + ++ ++ SL +L ++ + +K ++I +G
Sbjct: 76 KTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEM--KKLIDIARQTARG 132
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ YL S +IHRDLK++NI L + KI DFG+A + ++ G+ ++
Sbjct: 133 MDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 607 PPEYVK---KGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ YS + DVY+FG++L ++++ +
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 420 PNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQG 474
PN V F+ + + + +G G FG VYKG L + A+K L A T+
Sbjct: 30 PNQAVLKFT-TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK 88
Query: 475 LE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW 533
+F E + + H N++R+ G ++ M+I EY+ N +LD +L + + +
Sbjct: 89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV-- 146
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593
+ V ++ G+ G+ YL +N +HRDL A NIL+++ L K+SDFG++++ D +
Sbjct: 147 LQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203
Query: 594 ANT---GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T G+I + PE + ++ DV+SFG+++ ++++
Sbjct: 204 TYTTSGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L T ++ F E +L LQH L+R+
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 500 CTERDENMLIYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
T + +I EY+ SL D D + +L K ++ + +G+ Y+ E N+
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYI-ERKNY-- 131
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDL+A+N+L+ L KI+DFG+A++ + A G + PE + G +++
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAINFGCFTI 190
Query: 619 KYDVYSFGVLLLQIIS 634
K DV+SFG+LL +I++
Sbjct: 191 KSDVWSFGILLYEIVT 206
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 31/218 (14%)
Query: 441 NKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQGL-EEFKNEVSLTARLQHVNL 493
+LGE FG VYKG+L + Q A+K L + L EEF++E L ARLQH N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLF-------------DPIRRYVLDWQKRVNII 540
+ +LG T+ +I+ Y + L +L D + L+ V+++
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ G+ YL S+ V+H+DL N+L+ ++LN KISD G LFR +V A+ +++
Sbjct: 135 AQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLG---LFR-EVYAADYYKLL 187
Query: 601 G----TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + G +S+ D++S+GV+L ++ S
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 7/198 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAV 72
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ I
Sbjct: 73 VTQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--I 127
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HR+L+A+NIL+ + L+ KI+DFG+A+L + A G + PE + G +++K
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYGTFTIK 186
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL +I++ R
Sbjct: 187 SDVWSFGILLTEIVTHGR 204
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 122/248 (49%), Gaps = 32/248 (12%)
Query: 406 GTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSA---------NKLGEGGFGPVYKGNL 456
G TP + F + F+F D A F+ +G G FG V G+L
Sbjct: 1 GHMTPGMKIF------IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHL 54
Query: 457 --PRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
P +E A+K L + T+ +F +E S+ + H N++ + G T+ M+I E
Sbjct: 55 KLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITE 114
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
++ N SLD +L ++ + + V ++ G+ G+ YL ++ +HRDL A NIL++
Sbjct: 115 FMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVN 169
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG+++ D + +G G +P PE ++ ++ DV+S+G
Sbjct: 170 SNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSASDVWSYG 227
Query: 627 VLLLQIIS 634
+++ +++S
Sbjct: 228 IVMWEVMS 235
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
Query: 416 DSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQG 474
D T NL S + + + +KLG G +G VY G + AVK L T
Sbjct: 13 DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTME 71
Query: 475 LEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQ 534
+EEF E ++ ++H NL+++LG CT ++ EY+P +L YL + R V
Sbjct: 72 VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEV---- 127
Query: 535 KRVNIIEGVTQ---GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
V ++ TQ + YL E NF IHRDL A N L+ K++DFG+++L D
Sbjct: 128 TAVVLLYMATQISSAMEYL-EKKNF--IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT 184
Query: 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
A+ G + PE + +S+K DV++FGVLL +I +
Sbjct: 185 YTAHAGAKFPI-KWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 108/199 (54%), Gaps = 11/199 (5%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG G G V+ G + AVK L S + F E +L +LQH L+R+
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
T+ + +I EY+ N SL +L P L K +++ + +G+ +++E N+ IH
Sbjct: 78 TQ-EPIYIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE-RNY--IH 132
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY--GYVPPEYVKKGIYSM 618
RDL+A+NIL+ + L+ KI+DFG+A+L D T R + + PE + G +++
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIE---DAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 619 KYDVYSFGVLLLQIISSKR 637
K DV+SFG+LL +I++ R
Sbjct: 190 KSDVWSFGILLTEIVTHGR 208
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 161
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 217
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 137
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 193
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKLLQYTSQICKGMEYL--- 133
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 189
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 136
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 192
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 129
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 185
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 128
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 184
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 135
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 191
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 130
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 186
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 133
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 189
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 130
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 186
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 7/203 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + ++G G FG V+ G + A+K + + E+F E + +L H L+
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 65
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G C E+ L++E++ + L YL +R + + + + V +G+ YL+E S
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS 123
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
VIHRDL A N L+ K+SDFGM + D ++TG + PE
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFS 179
Query: 615 IYSMKYDVYSFGVLLLQIISSKR 637
YS K DV+SFGVL+ ++ S +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 148
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 204
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 134
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 190
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 148
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----P 608
R IHRDL NIL++NE KI DFG+ K+ +D + V G P P
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAP 204
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 205 ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 130
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYGYVPP 608
R IHRDL NIL++NE KI DFG+ K+ +D V E I + P
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF----WYAP 186
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
KLG G FG V+ G + AVK L T ++ F E +L LQH L+R+
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 501 TERDENMLIYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T+ + +I E++ SL D D + +L K ++ + +G+ Y+ E N+ I
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYI-ERKNY--I 131
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+N+L+ L KI+DFG+A++ + A G + PE + G +++K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGCFTIK 190
Query: 620 YDVYSFGVLLLQIIS 634
+V+SFG+LL +I++
Sbjct: 191 SNVWSFGILLYEIVT 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 442 KLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 497 LGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
G C R LI E+LP SL YL R +D K + + +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKLLQYTSQICKGMEYL---G 134
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PE 609
R IHRDL NIL++NE KI DFG+ K+ +D + V G P PE
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK----VKEPGESPIFWYAPE 190
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + +S+ DV+SFGV+L ++ +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 29/248 (11%)
Query: 401 NLRTPGTSTPAAEYFDSDT---PNLQVFSFS-DIKAATNNFSSANKLGEGGFGPVYKGNL 456
+ + PGT T Y D +T PN V F+ ++ A+ +G G FG V G L
Sbjct: 11 HFKFPGTKT----YIDPETYEDPNRAVHQFAKELDASCIKIERV--IGAGEFGEVCSGRL 64
Query: 457 P----RGQEFAVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511
R A+K L T+ +F E S+ + H N++ + G T M++ E
Sbjct: 65 KLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIE 124
Query: 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
++ N +LD +L ++ + + V ++ G+ G+ YL ++ +HRDL A NIL++
Sbjct: 125 FMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVN 179
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFG 626
+ L K+SDFG++++ D + T T G +P PE ++ ++ DV+S+G
Sbjct: 180 SNLVCKVSDFGLSRVIEDDPEAVYT----TTGGKIPVRWTAPEAIQYRKFTSASDVWSYG 235
Query: 627 VLLLQIIS 634
+++ +++S
Sbjct: 236 IVMWEVMS 243
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + ++G G FG V+ G + A+K + + E+F E + +L H L+
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 68
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G C E+ L++E++ + L YL +R + + + + V +G+ YL+E
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
VIHRDL A N L+ K+SDFGM + D ++TG + PE
Sbjct: 127 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFS 182
Query: 615 IYSMKYDVYSFGVLLLQIISSKR 637
YS K DV+SFGVL+ ++ S +
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + ++G G FG V+ G + A+K + + E+F E + +L H L+
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 65
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G C E+ L++E++ + L YL +R + + + + V +G+ YL+E
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 123
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
VIHRDL A N L+ K+SDFGM + D ++TG + PE
Sbjct: 124 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFS 179
Query: 615 IYSMKYDVYSFGVLLLQIISSKR 637
YS K DV+SFGVL+ ++ S +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + ++G G FG V+ G + A+K + + E+F E + +L H L+
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 63
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G C E+ L++E++ + L YL +R + + + + V +G+ YL+E
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
VIHRDL A N L+ K+SDFGM + D ++TG + PE
Sbjct: 122 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFS 177
Query: 615 IYSMKYDVYSFGVLLLQIISSKR 637
YS K DV+SFGVL+ ++ S +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 442 KLGEGGFGPVYKGN----LPRGQEF--AVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LGEG FG V+ LP + AVK L S ++F+ E L LQH +++R
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 496 VLGYCTERDENMLIYEYLPNKSLDLYL--FDPIRRYV----------LDWQKRVNIIEGV 543
G CTE ++++EY+ + L+ +L P + + L + + + V
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEANTGRIVGT 602
G++YL + +HRDL N L+ L KI DFGM++ ++ D GR +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 223
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641
++PPE + ++ + DV+SFGV+L +I + + Y
Sbjct: 224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 430 IKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRL--SATSTQGL-EEFKNEVSLT 485
I +F N LG+G F VY+ ++ G E A+K + A G+ + +NEV +
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+L+H ++L + Y + + L+ E N ++ YL + ++ + + + + + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIIT 123
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
G+LYL + ++HRDL SN+LL +N KI+DFG+A + ++ T + GT Y
Sbjct: 124 GMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNY 178
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQII 633
+ PE + + ++ DV+S G + ++
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLL 206
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 110/215 (51%), Gaps = 9/215 (4%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+ ++G G FG VYKG + ++ + + + F+NEV++ + +HVN+L +GY
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T +D ++ ++ SL +L ++ + ++I QG+ YL + +I
Sbjct: 101 MT-KDNLAIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---II 154
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK---KGIY 616
HRD+K++NI L L KI DFG+A + + + G+ ++ PE ++ +
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 617 SMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFL 651
S + DVYS+G++L ++++ + + + + F+
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 442 KLGEGGFGPVYKGN----LPRGQEF--AVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LGEG FG V+ LP + AVK L S ++F+ E L LQH +++R
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 496 VLGYCTERDENMLIYEYLPNKSLDLYL--FDPIRRYV----------LDWQKRVNIIEGV 543
G CTE ++++EY+ + L+ +L P + + L + + + V
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEANTGRIVGT 602
G++YL + +HRDL N L+ L KI DFGM++ ++ D GR +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 194
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641
++PPE + ++ + DV+SFGV+L +I + + Y
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + ++G G FG V+ G + A+K + S ++F E + +L H L+
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLV 85
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G C E+ L++E++ + L YL +R + + + + V +G+ YL+E
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
VIHRDL A N L+ K+SDFGM + D ++TG + PE
Sbjct: 144 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFS 199
Query: 615 IYSMKYDVYSFGVLLLQIISSKR 637
YS K DV+SFGVL+ ++ S +
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 442 KLGEGGFGPVYKGN----LPRGQEF--AVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LGEG FG V+ LP + AVK L S ++F+ E L LQH +++R
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 496 VLGYCTERDENMLIYEYLPNKSLDLYL--FDPIRRYV----------LDWQKRVNIIEGV 543
G CTE ++++EY+ + L+ +L P + + L + + + V
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEANTGRIVGT 602
G++YL + +HRDL N L+ L KI DFGM++ ++ D GR +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG-GRTMLP 200
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641
++PPE + ++ + DV+SFGV+L +I + + Y
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 102/206 (49%), Gaps = 21/206 (10%)
Query: 441 NKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+LG+G FG V G+ AVK+L ++ + L +F+ E+ + LQH N+++
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 496 VLGYC--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
G C R LI EYLP SL YL R +D K + + +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL--- 131
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYGYVPP 608
R IHR+L NIL++NE KI DFG+ K+ +D V E I + P
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIF----WYAP 187
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + +S+ DV+SFGV+L ++ +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G FG VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 69
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 125
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 126 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPES 181
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 26/270 (9%)
Query: 406 GTSTPAAEYFDSDTPNL----QVFSFSDIKAAT-NNFSSANKLGEGGFGPVYKG------ 454
G T YF PN + S SD+K N + LG G FG VY+G
Sbjct: 11 GIPTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP 70
Query: 455 NLPRGQEFAVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513
N P + AVK L ++ E +F E + ++L H N++R +G + ++ E +
Sbjct: 71 NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELM 130
Query: 514 PNKSLDLYLFD----PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNIL 569
L +L + P + L +++ + G YL+E ++F IHRD+ A N L
Sbjct: 131 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCL 187
Query: 570 LDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSF 625
L P KI DFGMA+ + G + ++PPE +GI++ K D +SF
Sbjct: 188 LTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 626 GVLLLQIISSKRNARYYGTSENLNFLEYAS 655
GVLL +I S Y + N LE+ +
Sbjct: 247 GVLLWEIFS--LGYMPYPSKSNQEVLEFVT 274
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + ++G G FG V+ G + A+K + + E+F E + +L H L+
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 66
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G C E+ L+ E++ + L YL +R + + + + V +G+ YL+E
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
VIHRDL A N L+ K+SDFGM + D ++TG + PE
Sbjct: 125 ---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV-KWASPEVFSFS 180
Query: 615 IYSMKYDVYSFGVLLLQIISSKR 637
YS K DV+SFGVL+ ++ S +
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 415 FDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ 473
D +PN + + + + +KLG G +G VY+G + AVK L T
Sbjct: 3 MDPSSPN-----YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTM 56
Query: 474 GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW 533
+EEF E ++ ++H NL+++LG CT +I E++ +L YL + R+ V
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--- 113
Query: 534 QKRVNIIEGVTQ---GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590
V ++ TQ + YL E NF IHRDL A N L+ K++DFG+++L D
Sbjct: 114 -NAVVLLYMATQISSAMEYL-EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
A+ G + PE + +S+K DV++FGVLL +I +
Sbjct: 170 TXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 418 DTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEE 477
+ P+ + + + + +LG G FG V G RGQ ++ + +E
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDE 65
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV 537
F E + L H L+++ G CT++ +I EY+ N L YL + R+ Q+ +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLL 123
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597
+ + V + + YL+ + + +HRDL A N L++++ K+SDFG+++ D + ++ G
Sbjct: 124 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ PPE + +S K D+++FGVL+ +I S
Sbjct: 181 SKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 69
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 125
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 126 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPES 181
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 415 FDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ 473
D +PN + + + + +KLG G +G VY+G + AVK L T
Sbjct: 3 MDPSSPN-----YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTM 56
Query: 474 GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW 533
+EEF E ++ ++H NL+++LG CT +I E++ +L YL + R+ V
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--- 113
Query: 534 QKRVNIIEGVTQ---GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590
V ++ TQ + YL E NF IHRDL A N L+ K++DFG+++L D
Sbjct: 114 -NAVVLLYMATQISSAMEYL-EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
A+ G + PE + +S+K DV++FGVLL +I +
Sbjct: 170 TYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
+G GGFG VY+ G E AVK +Q +E + E L A L+H N++ + G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
C + L+ E+ L+ L +R D VN + +G+ YL + + +
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSG--KRIPPD--ILVNWAVQIARGMNYLHDEAIVPI 129
Query: 559 IHRDLKASNILLDNELNP--------KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
IHRDLK+SNIL+ ++ KI+DFG+A+ + + + G Y ++ PE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG----AYAWMAPEV 185
Query: 611 VKKGIYSMKYDVYSFGVLLLQIISSK 636
++ ++S DV+S+GVLL ++++ +
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 415 FDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ 473
D +PN + + + + +KLG G +G VY+G + AVK L T
Sbjct: 3 MDPSSPN-----YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTM 56
Query: 474 GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW 533
+EEF E ++ ++H NL+++LG CT +I E++ +L YL + R+ V
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--- 113
Query: 534 QKRVNIIEGVTQ---GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590
V ++ TQ + YL E NF IHRDL A N L+ K++DFG+++L D
Sbjct: 114 -NAVVLLYMATQISSAMEYL-EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
A+ G + PE + +S+K DV++FGVLL +I +
Sbjct: 170 TYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 415 FDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ 473
D +PN + + + + +KLG G +G VY+G + AVK L T
Sbjct: 3 MDPSSPN-----YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTM 56
Query: 474 GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW 533
+EEF E ++ ++H NL+++LG CT +I E++ +L YL + R+ V
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--- 113
Query: 534 QKRVNIIEGVTQ---GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590
V ++ TQ + YL E NF IHRDL A N L+ K++DFG+++L D
Sbjct: 114 -SAVVLLYMATQISSAMEYL-EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
A+ G + PE + +S+K DV++FGVLL +I +
Sbjct: 170 TYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 72
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 73 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 128
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 129 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPES 184
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 415 FDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ 473
D +PN + + + + +KLG G +G VY+G + AVK L T
Sbjct: 3 MDPSSPN-----YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTM 56
Query: 474 GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW 533
+EEF E ++ ++H NL+++LG CT +I E++ +L YL + R+ V
Sbjct: 57 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--- 113
Query: 534 QKRVNIIEGVTQ---GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590
V ++ TQ + YL E NF IHRDL A N L+ K++DFG+++L D
Sbjct: 114 -NAVVLLYMATQISSAMEYL-EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
A+ G + PE + +S+K DV++FGVLL +I +
Sbjct: 170 TYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 26/270 (9%)
Query: 406 GTSTPAAEYFDSDTPNL----QVFSFSDIKAAT-NNFSSANKLGEGGFGPVYKG------ 454
G T YF PN + S SD+K N + LG G FG VY+G
Sbjct: 11 GIPTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP 70
Query: 455 NLPRGQEFAVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513
N P + AVK L ++ E +F E + ++ H N++R +G + ++ E +
Sbjct: 71 NDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELM 130
Query: 514 PNKSLDLYLFD----PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNIL 569
L +L + P + L +++ + G YL+E ++F IHRD+ A N L
Sbjct: 131 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCL 187
Query: 570 LDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSF 625
L P KI DFGMA+ + G + ++PPE +GI++ K D +SF
Sbjct: 188 LTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 626 GVLLLQIISSKRNARYYGTSENLNFLEYAS 655
GVLL +I S Y + N LE+ +
Sbjct: 247 GVLLWEIFS--LGYMPYPSKSNQEVLEFVT 274
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL--PRGQE--FAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVL 497
+G G FG V +G L P +E A+K L T+ EF +E S+ + +H N++R+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T M++ E++ N +LD +L ++ + + V ++ G+ G+ YL E S
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMS--- 138
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HRDL A NIL+++ L K+SDFG+++ ++ + +G G +P PE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG--GKIPIRWTAPEAIA 196
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ D +S+G+++ +++S
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS 218
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 71
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 127
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 128 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 183
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 71
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 127
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 128 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 183
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL--PRGQE--FAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVL 497
+G G FG V +G L P +E A+K L T+ EF +E S+ + +H N++R+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T M++ E++ N +LD +L ++ + + V ++ G+ G+ YL E S
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYLAEMS--- 136
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HRDL A NIL+++ L K+SDFG+++ ++ + +G G +P PE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG--GKIPIRWTAPEAIA 194
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ D +S+G+++ +++S
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 71
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 127
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 128 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 183
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 108/202 (53%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL--PRGQEF--AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVL 497
+G G FG V G+L P +E A+K L + T+ +F +E S+ + H N++ +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G T+ M+I E++ N SLD +L ++ + + V ++ G+ G+ YL ++
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 129
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVK 612
+HR L A NIL+++ L K+SDFG+++ D + +G G +P PE ++
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQ 187
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ DV+S+G+++ +++S
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 71
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 72 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 127
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 128 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 183
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 75
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 76 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 131
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 132 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 187
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 71
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 127
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 128 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 183
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 71
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 72 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 127
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 128 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 183
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 73
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 129
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 130 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 185
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 102/197 (51%), Gaps = 7/197 (3%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG G FG V+ G + A+K L T E F E + +L+H L+++
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVV 73
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+E + ++ EY+ SL +L D R L V++ V G+ Y+ E N+ IH
Sbjct: 74 SE-EPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAAQVAAGMAYI-ERMNY--IH 128
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKY 620
RDL+++NIL+ N L KI+DFG+A+L + A G + PE G +++K
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKS 187
Query: 621 DVYSFGVLLLQIISSKR 637
DV+SFG+LL ++++ R
Sbjct: 188 DVWSFGILLTELVTKGR 204
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 69
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL 125
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 126 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPES 181
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 182 LAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 73
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 129
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 130 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 185
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Query: 418 DTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEE 477
+ P+ + + + + +LG G FG V G RGQ ++ + +E
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDE 65
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV 537
F E + L H L+++ G CT++ +I EY+ N L YL + R+ Q+ +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLL 123
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597
+ + V + + YL+ + + +HRDL A N L++++ K+SDFG+++ D ++ G
Sbjct: 124 EMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ PPE + +S K D+++FGVL+ +I S
Sbjct: 181 SKFPVR-WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 114/246 (46%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++L H N++R +G + ++ E + L +L + P + L
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 141 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 196
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 254
Query: 650 FLEYAS 655
LE+ +
Sbjct: 255 VLEFVT 260
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 119/270 (44%), Gaps = 26/270 (9%)
Query: 406 GTSTPAAEYFDSDTPNL----QVFSFSDIKAAT-NNFSSANKLGEGGFGPVYKG------ 454
G T YF PN + S SD+K N + LG G FG VY+G
Sbjct: 11 GIPTTENLYFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMP 70
Query: 455 NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513
N P + AVK L S Q +F E + ++ H N++R +G + ++ E +
Sbjct: 71 NDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELM 130
Query: 514 PNKSLDLYLFD----PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNIL 569
L +L + P + L +++ + G YL+E ++F IHRD+ A N L
Sbjct: 131 AGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCL 187
Query: 570 LDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSF 625
L P KI DFGMA+ + G + ++PPE +GI++ K D +SF
Sbjct: 188 LTCP-GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSF 246
Query: 626 GVLLLQIISSKRNARYYGTSENLNFLEYAS 655
GVLL +I S Y + N LE+ +
Sbjct: 247 GVLLWEIFSLGYMP--YPSKSNQEVLEFVT 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 105/204 (51%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 84
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 85 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 140
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A+ G + PE
Sbjct: 141 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPES 196
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 197 LAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +LG G FG V G RGQ ++ + +EF E + L H L+
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLV 66
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G CT++ +I EY+ N L YL + R+ Q+ + + + V + + YL+
Sbjct: 67 QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLE--- 121
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+ + +HRDL A N L++++ K+SDFG+++ D ++ G + PPE +
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 180
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
+S K D+++FGVL+ +I S
Sbjct: 181 KFSSKSDIWAFGVLMWEIYS 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +LG G FG V G RGQ ++ + +EF E + L H L+
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLV 73
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G CT++ +I EY+ N L YL + R+ Q+ + + + V + + YL+
Sbjct: 74 QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLE--- 128
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+ + +HRDL A N L++++ K+SDFG+++ D ++ G + PPE +
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR-WSPPEVLMYS 187
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
+S K D+++FGVL+ +I S
Sbjct: 188 KFSSKSDIWAFGVLMWEIYS 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +LG G FG V G RGQ ++ + +EF E + L H L+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLV 67
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G CT++ +I EY+ N L YL + R+ Q+ + + + V + + YL+
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+ + +HRDL A N L++++ K+SDFG+++ D ++ G + PPE +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 181
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
+S K D+++FGVL+ +I S
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y++ +HR
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHR 387
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 446
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 447 VWSFGILLTELTTKGR 462
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +LG G FG V G RGQ ++ + +EF E + L H L+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLV 62
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G CT++ +I EY+ N L YL + R+ Q+ + + + V + + YL+
Sbjct: 63 QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLE--- 117
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+ + +HRDL A N L++++ K+SDFG+++ D ++ G + PPE +
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYS 176
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
+S K D+++FGVL+ +I S
Sbjct: 177 KFSSKSDIWAFGVLMWEIYS 196
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 74 E-EPIXIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 128
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYGRFTIKSD 187
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 188 VWSFGILLTELTTKGR 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y++ +HR
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHR 304
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 363
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKG---NLPRGQE---FAVKRLSATSTQGLEEFKNEVSLTARL 488
+N +LGEG FG V+ NL Q+ AVK L S ++F E L L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQ----------KRVN 538
QH ++++ G C E D ++++EY+ + L+ +L VL + + ++
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598
I + + G++YL ++ +HRDL N L+ L KI DFGM+ +DV + R
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS----RDVYSTDYYR 185
Query: 599 IVG----TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641
+ G ++PPE + ++ + DV+S GV+L +I + + Y
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY 232
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 250 E-EPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 304
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 363
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G+G FG V G+ RG + AVK + +T + F E S+ +L+H NL+++LG E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 503 RDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
+ ++ EY+ SL YL R VL + V + + YL E +NF +HR
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL-EGNNF--VHR 132
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL A N+L+ + K+SDFG+ K D TG++ + PE +++ +S K D
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKL--PVKWTAPEALREAAFSTKSD 187
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL +I S R
Sbjct: 188 VWSFGILLWEIYSFGR 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +LG G FG V G RGQ ++ + +EF E + L H L+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLV 67
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ G CT++ +I EY+ N L YL + R+ Q+ + + + V + + YL+
Sbjct: 68 QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+ + +HRDL A N L++++ K+SDFG+++ D ++ G + PPE +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYS 181
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
+S K D+++FGVL+ +I S
Sbjct: 182 KFSSKSDIWAFGVLMWEIYS 201
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 107/198 (54%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGN-LPRGQ----EFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRV 496
LG G FG VYKG +P G+ A+K L+ T+ + EF +E + A + H +L+R+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
LG C L+ + +P+ L Y+ + + + Q +N + +G++YL+E
Sbjct: 106 LGVCLS-PTIQLVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 159
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIY 616
R++HRDL A N+L+ + + KI+DFG+A+L D E N ++ E + +
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 617 SMKYDVYSFGVLLLQIIS 634
+ + DV+S+GV + ++++
Sbjct: 220 THQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 107/198 (54%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGN-LPRGQ----EFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRV 496
LG G FG VYKG +P G+ A+K L+ T+ + EF +E + A + H +L+R+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
LG C L+ + +P+ L Y+ + + + Q +N + +G++YL+E
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIY 616
R++HRDL A N+L+ + + KI+DFG+A+L D E N ++ E + +
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 617 SMKYDVYSFGVLLLQIIS 634
+ + DV+S+GV + ++++
Sbjct: 197 THQSDVWSYGVTIWELMT 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 73
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 74 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 129
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A G + PE
Sbjct: 130 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPES 185
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 186 LAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 13/204 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNL 72
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYL 550
+++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 73 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL 128
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
E NF IHRDL A N L+ K++DFG+++L D A G + PE
Sbjct: 129 -EKKNF--IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPES 184
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ +S+K DV++FGVLL +I +
Sbjct: 185 LAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%), Gaps = 30/217 (13%)
Query: 441 NKLGEGGFGPVYKG---NLPRGQE---FAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+LGEG FG V+ NL ++ AVK L + ++F+ E L LQH +++
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYL--FDPIRRYVLDWQKR-----------VNIIE 541
+ G C + D ++++EY+ + L+ +L P ++D Q R ++I
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ G++YL ++ +HRDL N L+ L KI DFGM+ +DV + R+ G
Sbjct: 141 QIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS----RDVYSTDYYRVGG 193
Query: 602 ----TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++PPE + ++ + DV+SFGV+L +I +
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 250 E-EPIYIVGEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 304
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 363
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 364 VWSFGILLTELTTKGR 379
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 127
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 186
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 187 VWSFGILLTELTTKGR 202
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 140 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 195
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 196 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 253
Query: 650 FLEYAS 655
LE+ +
Sbjct: 254 VLEFVT 259
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 132 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 187
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 188 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 245
Query: 650 FLEYAS 655
LE+ +
Sbjct: 246 VLEFVT 251
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 129
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 188
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 189 VWSFGILLTELTTKGR 204
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 140 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 195
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 196 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 253
Query: 650 FLEYAS 655
LE+ +
Sbjct: 254 VLEFVT 259
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 29/210 (13%)
Query: 441 NKLGEGGFGPVYKGNLPR--------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++LG+G FG V L R G AVK+L + +F+ E+ + L H +
Sbjct: 13 SQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 68
Query: 493 LL---RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+ R + Y R E L+ EYLP+ L +L R LD + + + +G+ Y
Sbjct: 69 FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEY 126
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L + R +HRDL A NIL+++E + KI+DFG+AKL D D +V G P
Sbjct: 127 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXX----VVREPGQSPIF 179
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + I+S + DV+SFGV+L ++ +
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 141 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 196
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 254
Query: 650 FLEYAS 655
LE+ +
Sbjct: 255 VLEFVT 260
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
KLG G FG V+ + + AVK + S +E F E ++ LQH L+++
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 79
Query: 501 TERDENMLIYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T ++ +I E++ SL D D + L K ++ + +G+ ++ E N+ I
Sbjct: 80 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFI-EQRNY--I 133
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ L KI+DFG+A++ + A G + PE + G +++K
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIK 192
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL++I++ R
Sbjct: 193 SDVWSFGILLMEIVTYGR 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 436 NFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL+
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 279
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYLQ 551
++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----SAVVLLYMATQISSAMEYL- 334
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV 611
E NF IHR+L A N L+ K++DFG+++L D A+ G + PE +
Sbjct: 335 EKKNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESL 391
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S+K DV++FGVLL +I +
Sbjct: 392 AYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 140
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 141 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMAQDIYR 196
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 197 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 254
Query: 650 FLEYAS 655
LE+ +
Sbjct: 255 VLEFVT 260
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 146
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 147 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 202
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 203 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 260
Query: 650 FLEYAS 655
LE+ +
Sbjct: 261 VLEFVT 266
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 25/224 (11%)
Query: 417 SDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEF-AVKRL--SATSTQ 473
S TP++ F+ ++F LG+G FG VY + A+K L S +
Sbjct: 10 SGTPDILTRHFT-----IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKE 64
Query: 474 GLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLD 532
G+E + + E+ + A L H N+LR+ Y +R LI EY P L L + D
Sbjct: 65 GVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFD 121
Query: 533 WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG---MAKLFRK 589
Q+ I+E + L+Y +VIHRD+K N+LL + KI+DFG A R+
Sbjct: 122 EQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR 178
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
+ GT Y+PPE ++ +++ K D++ GVL +++
Sbjct: 179 KT-------MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 157 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 212
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 213 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 270
Query: 650 FLEYAS 655
LE+ +
Sbjct: 271 VLEFVT 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
KLG G FG V+ + + AVK + S +E F E ++ LQH L+++
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVV 252
Query: 501 TERDENMLIYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T ++ +I E++ SL D D + L K ++ + +G+ ++++ N+ I
Sbjct: 253 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ-RNY--I 306
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ L KI+DFG+A++ + A G + PE + G +++K
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIK 365
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL++I++ R
Sbjct: 366 SDVWSFGILLMEIVTYGR 383
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 22/207 (10%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEF--AVKRLSATSTQ--GLE-EFKNEVSLTARLQ 489
+F LG+G FG VY R +F A+K L T + G+E + + EV + + L+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLAR-ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N+LR+ GY + LI EY P ++ L + R+ D Q+ I + L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRF--DEQRTATYITELANALSY 127
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFG---MAKLFRKDVDEANTGRIVGTYGYV 606
+ RVIHRD+K N+LL + KI+DFG A R+D + GT Y+
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-------LCGTLDYL 177
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQII 633
PPE ++ ++ K D++S GVL + +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G+G FG V G+ RG + AVK + +T + F E S+ +L+H NL+++LG E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 503 RDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
+ ++ EY+ SL YL R VL + V + + YL E +NF +HR
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL-EGNNF--VHR 141
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL A N+L+ + K+SDFG+ K D TG++ + PE +++ +S K D
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKL--PVKWTAPEALREKKFSTKSD 196
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL +I S R
Sbjct: 197 VWSFGILLWEIYSFGR 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG---MAKLFRKDVDEANTGRIVGT 602
L Y + RVIHRD+K N+LL + KI+DFG A R+D + GT
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-------LCGT 170
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 166
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 167 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 222
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 223 ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 280
Query: 650 FLEYAS 655
LE+ +
Sbjct: 281 VLEFVT 286
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 77 E-EPIYIVTEYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 131
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 190
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 191 VWSFGILLTELTTKGR 206
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 436 NFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL+
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 318
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYLQ 551
++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL- 373
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV 611
E NF IHR+L A N L+ K++DFG+++L D A+ G + PE +
Sbjct: 374 EKKNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESL 430
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S+K DV++FGVLL +I +
Sbjct: 431 AYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 13/203 (6%)
Query: 436 NFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+ + +KLG G +G VY+G + AVK L T +EEF E ++ ++H NL+
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLV 276
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ---GLLYLQ 551
++LG CT +I E++ +L YL + R+ V V ++ TQ + YL
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYL- 331
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV 611
E NF IHR+L A N L+ K++DFG+++L D A+ G + PE +
Sbjct: 332 EKKNF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESL 388
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S+K DV++FGVLL +I +
Sbjct: 389 AYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +++H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 181 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 236
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 237 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 294
Query: 650 FLEYAS 655
LE+ +
Sbjct: 295 VLEFVT 300
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 22/246 (8%)
Query: 426 SFSDIKAAT-NNFSSANKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLE-E 477
S SD+K N + LG G FG VY+G N P + AVK L ++ E +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 478 FKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD----PIRRYVLDW 533
F E + ++ H N++R +G + ++ E + L +L + P + L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRK 589
+++ + G YL+E ++F IHRD+ A N LL P KI DFGMA+ +
Sbjct: 158 LDLLHVARDIACGCQYLEE-NHF--IHRDIAARNCLLTCP-GPGRVAKIGDFGMARDIYR 213
Query: 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649
G + ++PPE +GI++ K D +SFGVLL +I S Y + N
Sbjct: 214 AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQE 271
Query: 650 FLEYAS 655
LE+ +
Sbjct: 272 VLEFVT 277
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 443 LGEGGFGPVYKGNLPR--------GQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNL 493
LGEG FG V L R G++ AVK L S + + K E+ + L H N+
Sbjct: 29 LGEGHFGKV---ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 494 LRVLGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ 551
++ G CTE N LI E+LP+ SL YL P + ++ ++++ + +G+ YL
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL- 142
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT--GRIVGTYGYVPPE 609
+ + +HRDL A N+L+++E KI DFG+ K D + R + Y PE
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PE 199
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + + + DV+SFGV L ++++
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 13/196 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G+G FG V G+ RG + AVK + +T + F E S+ +L+H NL+++LG E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 503 RDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
+ ++ EY+ SL YL R VL + V + + YL E +NF +HR
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL-EGNNF--VHR 126
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL A N+L+ + K+SDFG+ K + +TG++ + PE +++ +S K D
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSD 181
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL +I S R
Sbjct: 182 VWSFGILLWEIYSFGR 197
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVT 544
+ L+H N+LR+ GY + LI EY P + + +++ D Q+ I +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELA 123
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGT 602
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGT 174
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L Y + RVIHRD+K N+LL + KI+DFG + + + GT Y
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDY 175
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+PPE ++ ++ K D++S GVL + + K
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 22/205 (10%)
Query: 443 LGEGGFGPVYKGNLPR--------GQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNL 493
LGEG FG V L R G++ AVK L S + + K E+ + L H N+
Sbjct: 17 LGEGHFGKV---ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 494 LRVLGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ 551
++ G CTE N LI E+LP+ SL YL P + ++ ++++ + +G+ YL
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYL- 130
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT--GRIVGTYGYVPPE 609
+ + +HRDL A N+L+++E KI DFG+ K D + R + Y PE
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PE 187
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + + + DV+SFGV L ++++
Sbjct: 188 CLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ L +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G+G FG V G+ RG + AVK + +T + F E S+ +L+H NL+++LG E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 503 RDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
+ ++ EY+ SL YL R VL + V + + YL E +NF +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL-EGNNF--VHR 313
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL A N+L+ + K+SDFG+ K D TG++ + PE +++ +S K D
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTKEASSTQD---TGKL--PVKWTAPEALREKKFSTKSD 368
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL +I S R
Sbjct: 369 VWSFGILLWEIYSFGR 384
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ L +L + +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYV-ERMNY--VHR 138
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 197
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 198 VWSFGILLTELTTKGR 213
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEF--AVKRLSATSTQ--GLE-EFKNEVSLTARLQ 489
+F LG+G FG VY R +F A+K L T + G+E + + EV + + L+
Sbjct: 12 EDFDIGRPLGKGKFGNVYLAR-ERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N+LR+ GY + LI EY P ++ L + R+ D Q+ I + L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRF--DEQRTATYITELANALSY 127
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTYGYVP 607
+ RVIHRD+K N+LL + KI+DFG + V ++ R + GT Y+P
Sbjct: 128 CH---SKRVIHRDIKPENLLLGSNGELKIADFGWS------VHAPSSRRTTLCGTLDYLP 178
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQII 633
PE ++ ++ K D++S GVL + +
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 29/206 (14%)
Query: 442 KLGEGGFGPVYKGNLPRGQ-EFAVKRLSAT---------STQGLEEFK----NEVSLTAR 487
KLG G +G V G E A+K + + + +E+F NE+SL
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQG 546
L H N++++ ++ L+ E+ L F+ I R+ D NI++ + G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECDAANIMKQILSG 158
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNE---LNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
+ YL +++ ++HRD+K NILL+N+ LN KI DFG++ F KD + +GT
Sbjct: 159 ICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---LGTA 212
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE +KK Y+ K DV+S GV++
Sbjct: 213 YYIAPEVLKKK-YNEKCDVWSCGVIM 237
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 175
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTL 175
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L Y + RVIHRD+K N+LL + KI+DFG + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTELCGTLDY 172
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+PPE ++ ++ K D++S GVL + + K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTL 171
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTL 172
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 173
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 79
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 136
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 137 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 187
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 26/214 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVT 544
+ L+H N+LR+ GY + LI EY P + + +++ D Q+ I +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITELA 123
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGT 602
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 124 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLXGT 174
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 175 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 170
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L Y + RVIHRD+K N+LL + KI+DFG + + + GT Y
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDY 172
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+PPE ++ ++ K D++S GVL + + K
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTL 170
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 66
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 123
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 174
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 175 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYV-ERMNY--VHR 135
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAALYGRFTIKSD 194
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG---MAKLFRKDVDEANTGRIVGT 602
L Y + RVIHRD+K N+LL + KI+DFG A R+D + GT
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-------DLCGT 195
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTDLCGTL 170
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W V I
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWC--VQIA 124
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
EG+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 125 EGMN----YLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 178 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 127
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 128 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 182 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 88
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 146 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 196
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L T E F E + +L+H L+++ +
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L +Y L + V++ + G+ Y+ E N+ +HR
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYV-ERMNY--VHR 135
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+A+L + A G + PE G +++K D
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 194
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 195 VWSFGILLTELTTKGR 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 173
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 437 FSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
S K+GEG G V G++ AVK + Q E NEV + QH N++
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 496 VLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSN 555
+ +E ++ E+L +L D + + L+ ++ + E V Q L YL
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 556 FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
VIHRD+K+ +ILL + K+SDFG KDV + +VGT ++ PE + + +
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKX--LVGTPYWMAPEVISRSL 217
Query: 616 YSMKYDVYSFGVLLLQIISSK 636
Y+ + D++S G+++++++ +
Sbjct: 218 YATEVDIWSLGIMVIEMVDGE 238
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 129
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 61
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 118
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 119 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 169
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 170 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 120
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 121 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 175 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 132
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 133 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 186
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 187 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 130
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 131 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 184
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 185 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTL 173
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTXLCGTL 170
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 120 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRXXLCGTL 170
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRDDLCGTL 173
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVY---LAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQ 59
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 116
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 117 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 167
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 168 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 129
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
KLG+G FG V+ G A+K L E F E + +L+H L+++ +
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
E + ++ EY+ SL +L + +Y L + V++ + G+ Y++ +HR
Sbjct: 251 E-EPIYIVTEYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHR 305
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYD 621
DL+A+NIL+ L K++DFG+ +L + A G + PE G +++K D
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAALYGRFTIKSD 364
Query: 622 VYSFGVLLLQIISSKR 637
V+SFG+LL ++ + R
Sbjct: 365 VWSFGILLTELTTKGR 380
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLEEFKN---EVSLTARLQHVN 492
FS ++G G FG VY R E A+K++S + Q E++++ EV +L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++ G L+ EY + DL + + L + + G QGL YL
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV- 611
++ +IHRD+KA NILL K+ DFG A + A VGT ++ PE +
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 184
Query: 612 --KKGIYSMKYDVYSFGVLLLQIISSK 636
+G Y K DV+S G+ +++ K
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERK 211
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 129
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 118/245 (48%), Gaps = 42/245 (17%)
Query: 416 DSDTPNLQVFSFSDIKAATNN----------FSSANKLGEGGFGPVYKGN-LPRGQEF-- 462
D D P + F A N F LG G FG VYKG +P G++
Sbjct: 11 DYDIPTTENLYFQGSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI 70
Query: 463 --AVKRL-SATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLD 519
A+K L ATS + +E +E + A + + ++ R+LG C LI + +P L
Sbjct: 71 PVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCL- 128
Query: 520 LYLFDPIR--------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571
D +R +Y+L+W ++ +G+ YL++ R++HRDL A N+L+
Sbjct: 129 ---LDYVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHRDLAARNVLVK 176
Query: 572 NELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLL 629
+ KI+DFG+AKL + E A G++ ++ E + IY+ + DV+S+GV +
Sbjct: 177 TPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQSDVWSYGVTV 234
Query: 630 LQIIS 634
++++
Sbjct: 235 WELMT 239
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLEEFKN---EVSLTARLQHVN 492
FS ++G G FG VY R E A+K++S + Q E++++ EV +L+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++ G L+ EY + DL + + L + + G QGL YL
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV- 611
++ +IHRD+KA NILL K+ DFG A + A VGT ++ PE +
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANXFVGTPYWMAPEVIL 223
Query: 612 --KKGIYSMKYDVYSFGVLLLQIISSK 636
+G Y K DV+S G+ +++ K
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERK 250
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQI--- 127
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 128 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 181
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 182 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 129
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 130 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 183
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 184 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 182
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 136
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 137 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 190
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 191 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 63
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 120
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L Y + RVIHRD+K N+LL + KI+DFG + + + GT Y
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDY 173
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+PPE ++ ++ K D++S GVL + + K
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 441 NKLGEGGFGPVYKGNLPR--------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++LG+G FG V L R G AVK+L + +F+ E+ + L H +
Sbjct: 16 SQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 71
Query: 493 LL---RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+ R + Y R L+ EYLP+ L +L R LD + + + +G+ Y
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L + R +HRDL A NIL+++E + KI+DFG+AKL D D +V G P
Sbjct: 130 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIF 182
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + I+S + DV+SFGV+L ++ +
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 67
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 124
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI+DFG + V ++ R + GT
Sbjct: 125 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS------VHAPSSRRTTLCGTL 175
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ + K D++S GVL + + K
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 441 NKLGEGGFGPVYKGNLPR--------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++LG+G FG V L R G AVK+L + +F+ E+ + L H +
Sbjct: 29 SQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 84
Query: 493 LL---RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+ R + Y R L+ EYLP+ L +L R LD + + + +G+ Y
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEY 142
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L + R +HRDL A NIL+++E + KI+DFG+AKL D D +V G P
Sbjct: 143 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIF 195
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + I+S + DV+SFGV+L ++ +
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 114/219 (52%), Gaps = 25/219 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE-FAVKRLSATSTQG-------LEEFKNEVSL 484
A N ++G+GGFG V+KG L + + A+K L ++G +EF+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
+ L H N++++ G + ++ E++P L L D + + + W ++ ++ +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLD--NELNP---KISDFGMAKLFRKDVDEANTGRI 599
G+ Y+Q N ++HRDL++ NI L +E P K++DFG+++ V +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVS-----GL 186
Query: 600 VGTYGYVPPEYV--KKGIYSMKYDVYSFGVLLLQIISSK 636
+G + ++ PE + ++ Y+ K D YSF ++L I++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEV 482
+ S D K F K+G+G G VY ++ GQE A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ ++ N++ L DE ++ EYL SL D + +D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
Q L +L +SN +VIHRD+K+ NILL + + K++DFG + + +T +VGT
Sbjct: 125 CLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE V + Y K D++S G++ +++I +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEV 482
+ S D K F K+G+G G VY ++ GQE A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ ++ N++ L DE ++ EYL SL D + +D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
Q L +L +SN +VIHRD+K+ NILL + + K++DFG +++ +VGT
Sbjct: 125 CLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSEMVGT 179
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE V + Y K D++S G++ +++I +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 441 NKLGEGGFGPVYKGNLPR--------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++LG+G FG V L R G AVK+L + +F+ E+ + L H +
Sbjct: 17 SQLGKGNFGSV---ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 72
Query: 493 LL---RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+ R + Y R L+ EYLP+ L +L R LD + + + +G+ Y
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEY 130
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-- 607
L + R +HRDL A NIL+++E + KI+DFG+AKL D D +V G P
Sbjct: 131 L---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY----VVREPGQSPIF 183
Query: 608 ---PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + I+S + DV+SFGV+L ++ +
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 27/226 (11%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNI--------I 540
H N++++L ++ L++E+L S+DL F +D I +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKF-------MDASALTGIPLPLIKSYL 112
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 212
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXL----LDYVREHKDNIGSQYLLNWCVQI--- 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 29/231 (12%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLE 476
VF + + + + +LG+G FG VY+GN + +G+ AVK ++ + S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 477 EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------R 528
EF NE S+ +++R+LG ++ +++ E + + L YL +R R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
Q+ + + + G+ YL + +HRDL A N ++ ++ KI DFGM
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT---- 177
Query: 589 KDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ D++SFGV+L +I S
Sbjct: 178 RDIXETDXXR-KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQE-----FAVKRLSATSTQGLEE-FKNEVSLTAR 487
NN LG G FG V + G+E AVK L +T+ +E +E+ + +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-------FDPIRRYVLDWQKRVNI 539
L QH N++ +LG CT ++I EY L +L D L+ + ++
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
V QG+ +L ++ IHRD+ A N+LL N KI DFG+A+ D + G
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNF 650
++ PE + +Y+++ DV+S+G+LL +I S N Y G N F
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILVNSKF 264
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 27/226 (11%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNI--------I 540
H N++++L ++ L++E+L S+DL F +D I +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKF-------MDASALTGIPLPLIKSYL 110
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 111 FQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 166
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 27/226 (11%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNI--------I 540
H N++++L ++ L++E+L S+DL F +D I +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDF-------MDASALTGIPLPLIKSYL 112
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 113 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 168
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 169 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 212
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 29/231 (12%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLE 476
VF + + + + +LG+G FG VY+GN + +G+ AVK ++ + S +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 477 EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------R 528
EF NE S+ +++R+LG ++ +++ E + + L YL +R R
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 121
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
Q+ + + + G+ YL + +HRDL A N ++ ++ KI DFGM
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT---- 174
Query: 589 KDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ D++SFGV+L +I S
Sbjct: 175 RDIXETDXXR-KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 112
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +
Sbjct: 113 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEV 165
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 210
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 111
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 167
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 64
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 121
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI++FG + V ++ R + GT
Sbjct: 122 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTTLCGTL 172
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 22/219 (10%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQE-----FAVKRLSATSTQGLEE-FKNEVSLTAR 487
NN LG G FG V + G+E AVK L +T+ +E +E+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL--------FDP---IRRYVLDWQK 535
L QH N++ +LG CT ++I EY L +L DP I L +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 536 RVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595
++ V QG+ +L ++ IHRD+ A N+LL N KI DFG+A+ D +
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+S+G+LL +I S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEV 482
+ S D K F K+G+G G VY ++ GQE A+++++ E NE+
Sbjct: 12 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ ++ N++ L DE ++ EYL SL D + +D + +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
Q L +L +SN +VIHRD+K+ NILL + + K++DFG +++ +VGT
Sbjct: 125 CLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGT 179
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE V + Y K D++S G++ +++I +
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEV 482
+ S D K F K+G+G G VY ++ GQE A+++++ E NE+
Sbjct: 13 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ ++ N++ L DE ++ EYL SL D + +D + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
Q L +L +SN +VIHRD+K+ NILL + + K++DFG +++ +VGT
Sbjct: 126 CLQALEFL--HSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGT 180
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE V + Y K D++S G++ +++I +
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 118
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 119 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 174
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 109/226 (48%), Gaps = 27/226 (11%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNI--------I 540
H N++++L ++ L++E+L S+DL F +D I +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDF-------MDASALTGIPLPLIKSYL 111
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 112 FQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 167
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 168 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 211
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 10/207 (4%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K F KLGEG +G VYK + GQ A+K++ S L+E E+S+ +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCD 82
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
++++ G + + ++ EY S+ + +R L + I++ +GL Y
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR--LRNKTLTEDEIATILQSTLKGLEY 140
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPE 609
L R IHRD+KA NILL+ E + K++DFG+A + + N ++GT ++ PE
Sbjct: 141 LH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPE 195
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIISSK 636
+++ Y+ D++S G+ +++ K
Sbjct: 196 VIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 110
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 166
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 208
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 113/219 (51%), Gaps = 25/219 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE-FAVKRLSATSTQG-------LEEFKNEVSL 484
A N ++G+GGFG V+KG L + + A+K L ++G +EF+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
+ L H N++++ G + ++ E++P L L D + + + W ++ ++ +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLD--NELNP---KISDFGMAKLFRKDVDEANTGRI 599
G+ Y+Q N ++HRDL++ NI L +E P K++DFG ++ V +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVS-----GL 186
Query: 600 VGTYGYVPPEYV--KKGIYSMKYDVYSFGVLLLQIISSK 636
+G + ++ PE + ++ Y+ K D YSF ++L I++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQE-----FAVKRLSATSTQGLEE-FKNEVSLTAR 487
NN LG G FG V + G+E AVK L +T+ +E +E+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-------FDPIRRYVLDWQKRVNI 539
L QH N++ +LG CT ++I EY L +L D L+ + ++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
V QG+ +L ++ IHRD+ A N+LL N KI DFG+A+ D + G
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+S+G+LL +I S
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 130
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG AKL + E A G+
Sbjct: 131 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 184
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 185 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 20/211 (9%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEE--FKNEVSLTARLQHVNLLRVLGY 499
LG+G FG V K + QE+AVK ++ S + + EV L +L H N++++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ ++ E L FD I +R II+ V G+ Y+ +++ +
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 559 IHRDLKASNILLDN---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
+HRDLK NILL++ + + KI DFG++ F+++ + +GT Y+ PE V +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 616 YSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
Y K DV+S GV+L ++S +YG +E
Sbjct: 199 YDEKCDVWSAGVILYILLSG--TPPFYGKNE 227
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQ 489
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++++L ++ L++E+L D + L K + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLAF 118
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPE 609
+ RV+HRDLK N+L++ E K++DFG+A+ F V +V + P
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTLWYRAPEI 174
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ YS D++S G + ++++ R A + G SE
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 118
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 119 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 174
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG AKL + E A G+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVS 483
K ++F LG+G FG VY L R ++ A+K L S +G+E + + E+
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEG 542
+ + L+H N+LR+ Y +R L+ E+ P L + ++++ D Q+ +E
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEE 122
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IV 600
+ L Y E +VIHRD+K N+L+ + KI+DFG + V + R +
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMC 173
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
GT Y+PPE ++ + K D++ GVL + +
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG AKL + E A G+
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 187
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 20/211 (9%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEE--FKNEVSLTARLQHVNLLRVLGY 499
LG+G FG V K + QE+AVK ++ S + + EV L +L H N++++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ ++ E L FD I +R II+ V G+ Y+ +++ +
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 559 IHRDLKASNILLDN---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
+HRDLK NILL++ + + KI DFG++ F+++ + +GT Y+ PE V +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 616 YSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
Y K DV+S GV+L ++S +YG +E
Sbjct: 199 YDEKCDVWSAGVILYILLSG--TPPFYGKNE 227
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 16/209 (7%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQEF--AVKRL--SATSTQGLE-EFKNEVSLTAR 487
A +F LG+G FG VY + +F A+K L + G+E + + EV + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
L+H N+LR+ GY + LI EY P L + + D Q+ I + L
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
Y + +VIHRD+K N+LL + KI+DFG + + + GT Y+P
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLP 174
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ ++ K D++S GVL + + K
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 111
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 167
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 111
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 167
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 110
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 166
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVS 483
K ++F LG+G FG VY L R ++ A+K L S +G+E + + E+
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEG 542
+ + L+H N+LR+ Y +R L+ E+ P L + ++++ D Q+ +E
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEE 122
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IV 600
+ L Y E +VIHRD+K N+L+ + KI+DFG + V + R +
Sbjct: 123 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMC 173
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
GT Y+PPE ++ + K D++ GVL + +
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 20/211 (9%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEE--FKNEVSLTARLQHVNLLRVLGY 499
LG+G FG V K + QE+AVK ++ S + + EV L +L H N++++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ ++ E L FD I +R II+ V G+ Y+ +++ +
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 559 IHRDLKASNILLDN---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
+HRDLK NILL++ + + KI DFG++ F+++ + +GT Y+ PE V +G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---IGTAYYIAPE-VLRGT 198
Query: 616 YSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
Y K DV+S GV+L ++S +YG +E
Sbjct: 199 YDEKCDVWSAGVILYILLSG--TPPFYGKNE 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVS 483
K ++F LG+G FG VY L R ++ A+K L S +G+E + + E+
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVY---LAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 67
Query: 484 LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEG 542
+ + L+H N+LR+ Y +R L+ E+ P L + ++++ D Q+ +E
Sbjct: 68 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSATFMEE 123
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IV 600
+ L Y E +VIHRD+K N+L+ + KI+DFG + V + R +
Sbjct: 124 LADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS------VHAPSLRRRXMC 174
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
GT Y+PPE ++ + K D++ GVL + +
Sbjct: 175 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL 207
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG AKL + E A G+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 24/213 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRL--SATSTQGLE-EFKNEVSLT 485
A +F LG+G FG VY L R ++ A+K L + G+E + + EV +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVY---LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
+ L+H N+LR+ GY + LI EY P L + + D Q+ I +
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTY 603
L Y + RVIHRD+K N+LL + KI++FG + V ++ R + GT
Sbjct: 123 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS------VHAPSSRRTTLCGTL 173
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+PPE ++ ++ K D++S GVL + + K
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG AKL + E A G+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 180
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 29/213 (13%)
Query: 442 KLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
+LG+G FG VY+GN + +G+ AVK ++ + S + EF NE S+ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQG 546
R+LG ++ +++ E + + L YL +R R Q+ + + + G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ YL + +HRDL A N ++ ++ KI DFGM +D+ E + R G G +
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIXETDXXR-KGGKGLL 194
Query: 607 P-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P PE +K G+++ D++SFGV+L +I S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG G FG V G + AVK + S +EF E +L H L++ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
++ ++ EY+ N L YL + L+ + + + V +G+ +L+ + + IH
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKY 620
RDL A N L+D +L K+SDFGM + D ++ G + PE YS K
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPV-KWSAPEVFHYFKYSSKS 186
Query: 621 DVYSFGVLLLQIIS 634
DV++FG+L+ ++ S
Sbjct: 187 DVWAFGILMWEVFS 200
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 19/198 (9%)
Query: 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
KLG G FG V+ + + AVK + S +E F E ++ LQH L+++
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 501 TERDENMLIYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
T ++ +I E++ SL D D + L K ++ + +G+ ++ E N+ I
Sbjct: 247 T-KEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFI-EQRNY--I 300
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK 619
HRDL+A+NIL+ L KI+DFG+A++ K + PE + G +++K
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIK 349
Query: 620 YDVYSFGVLLLQIISSKR 637
DV+SFG+LL++I++ R
Sbjct: 350 SDVWSFGILLMEIVTYGR 367
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F LG G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG AKL + E A G+
Sbjct: 129 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK 182
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 183 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + A L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 115
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 171
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 111
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 112 LLQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 167
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F L G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E++ ++ L ++ I+ Y+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ---------- 110
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 166
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 208
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F L G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 134 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 187
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 188 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 110/216 (50%), Gaps = 32/216 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARL 488
F L G FG VYKG +P G++ A+K L ATS + +E +E + A +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNII 540
+ ++ R+LG C LI + +P L D +R +Y+L+W ++
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI--- 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGR 598
+G+ YL++ R++HRDL A N+L+ + KI+DFG+AKL + E A G+
Sbjct: 127 ---AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 180
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ E + IY+ + DV+S+GV + ++++
Sbjct: 181 V--PIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQ------- 114
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 115 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 167
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVK-----RLSATSTQGLEEFKNEVSLT 485
A N+ LGEG FG V + GQ+ A+K L+ + QG + E+S
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 67
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVT 544
L+H +++++ +DE +++ EY N+ LFD I +R + Q+ + +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 122
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
+ Y + +++HRDLK N+LLD LN KI+DFG++ + D G+
Sbjct: 123 SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSCGSPN 176
Query: 605 YVPPEYVKKGIYS-MKYDVYSFGVLLLQIISSK 636
Y PE + +Y+ + DV+S GV+L ++ +
Sbjct: 177 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 122/255 (47%), Gaps = 43/255 (16%)
Query: 396 ILGRRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGN 455
+L R L P TP+ E PN + F LG G FG VYKG
Sbjct: 21 LLQERELVEP--LTPSGE-----APNQALLRI----LKETEFKKIKVLGSGAFGTVYKGL 69
Query: 456 -LPRGQEF----AVKRL-SATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509
+P G++ A+ L ATS + +E +E + A + + ++ R+LG C LI
Sbjct: 70 WIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LI 128
Query: 510 YEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
+ +P L D +R +Y+L+W ++ +G+ YL++ R++HR
Sbjct: 129 TQLMPFGCL----LDYVREHKDNIGSQYLLNWCVQI------AKGMNYLEDR---RLVHR 175
Query: 562 DLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVPPEYVKKGIYSMK 619
DL A N+L+ + KI+DFG+AKL + E A G++ ++ E + IY+ +
Sbjct: 176 DLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV--PIKWMALESILHRIYTHQ 233
Query: 620 YDVYSFGVLLLQIIS 634
DV+S+GV + ++++
Sbjct: 234 SDVWSYGVTVWELMT 248
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVK-----RLSATSTQGLEEFKNEVSLT 485
A N+ LGEG FG V + GQ+ A+K L+ + QG + E+S
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 68
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVT 544
L+H +++++ +DE +++ EY N+ LFD I +R + Q+ + +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 123
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
+ Y + +++HRDLK N+LLD LN KI+DFG++ + D G+
Sbjct: 124 SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSCGSPN 177
Query: 605 YVPPEYVKKGIYS-MKYDVYSFGVLLLQIISSK 636
Y PE + +Y+ + DV+S GV+L ++ +
Sbjct: 178 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEV 482
+ S D K F K+G+G G VY ++ GQE A+++++ E NE+
Sbjct: 13 IVSVGDPKKKYTRFE---KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ ++ N++ L DE ++ EYL SL D + +D + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
Q L +L +SN +VIHR++K+ NILL + + K++DFG + + +T +VGT
Sbjct: 126 CLQALEFL--HSN-QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 180
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE V + Y K D++S G++ +++I +
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 113/219 (51%), Gaps = 25/219 (11%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQE-FAVKRLSATSTQG-------LEEFKNEVSL 484
A N ++G+GGFG V+KG L + + A+K L ++G +EF+ EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
+ L H N++++ G + ++ E++P L L D + + + W ++ ++ +
Sbjct: 77 MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLD--NELNP---KISDFGMAKLFRKDVDEANTGRI 599
G+ Y+Q N ++HRDL++ NI L +E P K++DF +++ V +
Sbjct: 133 LGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVS-----GL 186
Query: 600 VGTYGYVPPEYV--KKGIYSMKYDVYSFGVLLLQIISSK 636
+G + ++ PE + ++ Y+ K D YSF ++L I++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQE-----FAVKRLSATSTQGLEE-FKNEVSLTAR 487
NN LG G FG V + G+E AVK L +T+ +E +E+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL--------FDP---IRRYVLDWQK 535
L QH N++ +LG CT ++I EY L +L DP I +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 536 RVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595
++ V QG+ +L ++ IHRD+ A N+LL N KI DFG+A+ D +
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+S+G+LL +I S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 29/226 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQ 489
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNII 540
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-------- 111
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 112 --LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 29/226 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQ 489
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNII 540
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-------- 111
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 112 --LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVK-----RLSATSTQGLEEFKNEVSLT 485
A N+ LGEG FG V + GQ+ A+K L+ + QG + E+S
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 62
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVT 544
L+H +++++ +DE +++ EY N+ LFD I +R + Q+ + +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQII 117
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
+ Y + +++HRDLK N+LLD LN KI+DFG++ + D G+
Sbjct: 118 SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSCGSPN 171
Query: 605 YVPPEYVKKGIYS-MKYDVYSFGVLLLQIISSK 636
Y PE + +Y+ + DV+S GV+L ++ +
Sbjct: 172 YAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 442 KLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG+G FG VYK N G A K + S + LE++ E+ + A H ++++LG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ ++ E+ P ++D + + + R + + Q +V + + + L +L + R+IH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-VCRQMLEALNFLH---SKRIIH 132
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKGI 615
RDLKA N+L+ E + +++DFG++ K + + ++ +GT ++ PE V K
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTP 190
Query: 616 YSMKYDVYSFGVLLLQI 632
Y K D++S G+ L+++
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
LGEG +G V N + AVK + + E K E+ + L H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
E + L EY L FD I + + + G++YL +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSM 618
HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE +K + ++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 619 KYDVYSFGVLLLQIISSK 636
DV+S G++L +++ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 113
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 114 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 166
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 211
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 112
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 113 ---LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 165
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 29/226 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQ 489
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNII 540
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-------- 111
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 112 --LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 19/212 (8%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVK-----RLSATSTQGLEEFKNEVSLT 485
A N+ LGEG FG V + GQ+ A+K L+ + QG + E+S
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 58
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
L+H +++++ +DE +++ EY N+ D Y+ ++R + Q+ + +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD-YI---VQRDKMSEQEARRFFQQIIS 114
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ Y + +++HRDLK N+LLD LN KI+DFG++ + D G+ Y
Sbjct: 115 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSCGSPNY 168
Query: 606 VPPEYVKKGIYS-MKYDVYSFGVLLLQIISSK 636
PE + +Y+ + DV+S GV+L ++ +
Sbjct: 169 AAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 112
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 113 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 165
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 166 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 210
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 114
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 115 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 167
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 212
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 113
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 114 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 166
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 211
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 113
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 114 ---LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 166
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 167 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 211
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 29/226 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQ 489
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNII 540
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-------- 111
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 112 --LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVV 165
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 114
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 115 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 167
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 212
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 106/197 (53%), Gaps = 13/197 (6%)
Query: 442 KLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG+G FG VYK N G A K + S + LE++ E+ + A H ++++LG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ ++ E+ P ++D + + + R + + Q +V + + + L +L + R+IH
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-VCRQMLEALNFLH---SKRIIH 140
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKGI 615
RDLKA N+L+ E + +++DFG++ K + + ++ +GT ++ PE V K
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETMKDTP 198
Query: 616 YSMKYDVYSFGVLLLQI 632
Y K D++S G+ L+++
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 110
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTL 166
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ------- 115
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 116 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 168
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 112
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTL 168
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
LGEG +G V N + AVK + + E K E+ + L H N+++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
E + L EY L FD I + + + G++YL +
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 126
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSM 618
HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE +K + ++
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 619 KYDVYSFGVLLLQIISSK 636
DV+S G++L +++ +
Sbjct: 187 PVDVWSCGIVLTAMLAGE 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 110
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +V
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEVVTL 166
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 208
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+ ++ T T+G+ E+SL L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 111
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 167
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 209
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARLQHV 491
NF K+GEG +G VYK N G+ A+ ++ T T+G+ E+SL L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNIIEG 542
N++++L ++ L++E+L ++ L ++ I+ Y+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ---------- 110
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V T +V
Sbjct: 111 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTL 166
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ P + YS D++S G + ++++ R A + G SE
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 112/242 (46%), Gaps = 34/242 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEF------AVKRLSATSTQGLE-EFKNEVSLTAR 487
NN +GEG FG V++ P + AVK L ++ ++ +F+ E +L A
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL--FDP------------IRRYV--- 530
+ N++++LG C L++EY+ L+ +L P R V
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 531 ----LDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK- 585
L +++ I V G+ YL E + +HRDL N L+ + KI+DFG+++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645
++ D +A+ G ++PPE + Y+ + DV+++GV+L +I S YYG +
Sbjct: 224 IYSADYYKAD-GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP-YYGMA 281
Query: 646 EN 647
Sbjct: 282 HE 283
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 23/243 (9%)
Query: 427 FSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQ----EFAVK--RLSATSTQGLEEFKN 480
D+ N LGEG FG V +GNL + + AVK +L +S + +EEF +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 481 EVSLTARLQHVNLLRVLGYCTERDEN-----MLIYEYLPNKSLDLYLF----DPIRRYVL 531
E + H N++R+LG C E M+I ++ L YL + +++
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI- 144
Query: 532 DWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
Q + + + G+ YL SN +HRDL A N +L +++ ++DFG++K
Sbjct: 145 PLQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG- 200
Query: 592 DEANTGRIVGT-YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNF 650
D GRI ++ E + +Y+ K DV++FGV + +I + R Y +N
Sbjct: 201 DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI--ATRGMTPYPGVQNHEM 258
Query: 651 LEY 653
+Y
Sbjct: 259 YDY 261
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 111/226 (49%), Gaps = 19/226 (8%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLE 476
VF + + + + +LG+G FG VY+GN + +G+ AVK ++ + S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 477 EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------R 528
EF NE S+ +++R+LG ++ +++ E + + L YL +R R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
Q+ + + + G+ YL + +HRDL A N ++ ++ KI DFGM +
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ G+ + ++ PE +K G+++ D++SFGV+L +I S
Sbjct: 182 ETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 114/231 (49%), Gaps = 29/231 (12%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLE 476
VF + + + + +LG+G FG VY+GN + +G+ AVK ++ + S +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 477 EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------R 528
EF NE S+ +++R+LG ++ +++ E + + L YL +R R
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGR 124
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
Q+ + + + G+ YL + +HRDL A N ++ ++ KI DFGM
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT---- 177
Query: 589 KDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ D++SFGV+L +I S
Sbjct: 178 RDIYETDYYR-KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 120 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
LGEG +G V N + AVK + + E K E+ + L H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
E + L EY L FD I + + + G++YL +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSM 618
HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE +K + ++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 619 KYDVYSFGVLLLQIISSK 636
DV+S G++L +++ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
LGEG +G V N + AVK + + E K E+ + L H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
E + L EY L FD I + + + G++YL +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSM 618
HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE +K + ++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 619 KYDVYSFGVLLLQIISSK 636
DV+S G++L +++ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
LGEG +G V N + AVK + + E K E+ + L H N+++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
E + L EY L FD I + + + G++YL +
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGIT 127
Query: 560 HRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSM 618
HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE +K + ++
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 619 KYDVYSFGVLLLQIISSK 636
DV+S G++L +++ +
Sbjct: 188 PVDVWSCGIVLTAMLAGE 205
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVL 497
++G G FG V+ G L AVK T L+ +F E + + H N++R++
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G CT++ ++ E + + D F L + + ++ G+ YL+
Sbjct: 179 GVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYS 617
IHRDL A N L+ + KISDFGM++ V A+ G + PE + G YS
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 618 MKYDVYSFGVLLLQIIS 634
+ DV+SFG+LL + S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 37/237 (15%)
Query: 425 FSFSDI------KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-AT 470
FS +D+ + A + + +LG+G FG VY+G + +G A+K ++ A
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA 61
Query: 471 STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF------- 523
S + EF NE S+ +++R+LG ++ ++I E + L YL
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 524 -DPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582
+P+ K + + + G+ YL + +HRDL A N ++ + KI DFG
Sbjct: 122 NNPVLAPP-SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 583 MAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
M +D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 178 MT----RDIXETDXXR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 108/227 (47%), Gaps = 28/227 (12%)
Query: 443 LGEGGFGPVY-----KGNLPRGQEFAVKRLSA-TSTQGLEEFKNEVSLTARLQHVNLLRV 496
LGEG FG V N G+ AVK L A Q +K E+ + L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 497 LGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
G C ++ E L+ EY+P SL YL R+ + + + + + +G+ YL
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH--- 134
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PE 609
+ IHR+L A N+LLDN+ KI DFG+AK V E + V G P PE
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA----VPEGHEYYRVREDGDSPVFWYAPE 190
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYASI 656
+K+ + DV+SFGV L ++++ +++ S FLE I
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQ----SPPTKFLELIGI 233
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 443 LGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARL-QHVNLL 494
LG G FG V + + + AVK L +T +E+ + + H+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 495 RVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNIIEG----- 542
+LG CT+ M+I E+ +L YL F P + D K +E
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 543 --VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 443 LGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
LG+G FG K + G+ +K L + F EV + L+H N+L+ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHR 561
+ I EY+ +L + +Y W +RV+ + + G+ YL + +IHR
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 562 DLKASNILLDNELNPKISDFGMAKLF------------RKDVDEANTGRIVGTYGYVPPE 609
DL + N L+ N ++DFG+A+L K D +VG ++ PE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 610 YVKKGIYSMKYDVYSFGVLLLQII 633
+ Y K DV+SFG++L +II
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 32/229 (13%)
Query: 443 LGEGGFGPVY-----KGNLPRGQEFAVKRLSA-TSTQGLEEFKNEVSLTARLQHVNLLRV 496
LGEG FG V N G+ AVK L A Q +K E+ + L H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 497 LGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL--QE 552
G C ++ E L+ EY+P SL YL R+ + + + + + +G+ YL Q
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQH 137
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP----- 607
Y IHR+L A N+LLDN+ KI DFG+AK V E + V G P
Sbjct: 138 Y-----IHRNLAARNVLLDNDRLVKIGDFGLAKA----VPEGHEYYRVREDGDSPVFWYA 188
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYASI 656
PE +K+ + DV+SFGV L ++++ +++ S FLE I
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ----SPPTKFLELIGI 233
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 29/227 (12%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA-TSTQGLEEFK-NEVSLTARL 488
+ NF K+GEG +G VYK N G+ A+K++ T T+G+ E+SL L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------FDPIRRYVLDWQKRVNI 539
H N++++L ++ L++E++ ++ L ++ I+ Y+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQ------- 114
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599
+ QGL + + RV+HRDLK N+L++ E K++DFG+A+ F V +
Sbjct: 115 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYXHEV 167
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
V + P + YS D++S G + ++++ R A + G SE
Sbjct: 168 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT--RRALFPGDSE 212
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 443 LGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARL-QHVNLL 494
LG G FG V + + + AVK L +T +E+ + + H+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 495 RVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNIIEG----- 542
+LG CT+ M+I E+ +L YL F P + D K +E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 543 --VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ LG G FG V + + + AVK L +T +E+ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D K
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 540 IEG-------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592
+E V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 29/213 (13%)
Query: 442 KLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
+LG+G FG VY+GN + +G+ AVK ++ + S + EF NE S+ +++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQG 546
R+LG ++ +++ E + + L YL +R R Q+ + + + G
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ YL + +HRDL A N ++ ++ KI DFGM +D+ E + R G G +
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMT----RDIYETDYYR-KGGKGLL 193
Query: 607 P-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P PE +K G+++ D++SFGV+L +I S
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 440 ANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVL 497
++G G FG V+ G L AVK T L+ +F E + + H N++R++
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G CT++ ++ E + + D F L + + ++ G+ YL+
Sbjct: 179 GVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYS 617
IHRDL A N L+ + KISDFGM++ V A+ G + PE + G YS
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 618 MKYDVYSFGVLLLQIIS 634
+ DV+SFG+LL + S
Sbjct: 294 SESDVWSFGILLWETFS 310
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 122 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG +G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 31/225 (13%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGLEEFKNEV 482
+ A + + +LG+G FG VY+G + +G A+K ++ A S + EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 64
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIRRYVLDWQ 534
S+ +++R+LG ++ ++I E + L YL +P+
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-SLS 123
Query: 535 KRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
K + + + G+ YL + +HRDL A N ++ + KI DFGM +D+ E
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIXET 176
Query: 595 NTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 177 DXXR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 24/221 (10%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQE-----FAVKRLSATSTQGLEE-FKNEVSLTAR 487
NN LG G FG V + G+E AVK L +T+ +E +E+ + +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDW 533
L QH N++ +LG CT ++I EY L +L ++P L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593
+ ++ V QG+ +L ++ IHRD+ A N+LL N KI DFG+A+ D +
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+S+G+LL +I S
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRL---SATSTQGLEEFKNEVSLTA 486
K + +KLG GG VY + + A+K + + L+ F+ EV ++
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSS 66
Query: 487 RLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+L H N++ ++ E D L+ EY+ +L Y+ L +N + G
Sbjct: 67 QLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDG 123
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ + + R++HRD+K NIL+D+ KI DFG+AK + T ++GT Y
Sbjct: 124 IKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL-SETSLTQTNHVLGTVQYF 179
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQII 633
PE K D+YS G++L +++
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEML 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 443 LGEGGFGPVY-----KGNLPRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRV 496
LGEG FG V N G+ AVK L A + Q +K E+ + L H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 497 LGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL--QE 552
G C + L+ EY+P SL YL R+ + + + + + +G+ YL Q
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQH 154
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP----- 607
Y IHRDL A N+LLDN+ KI DFG+AK V E + V G P
Sbjct: 155 Y-----IHRDLAARNVLLDNDRLVKIGDFGLAKA----VPEGHEXYRVREDGDSPVFWYA 205
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYASI 656
PE +K+ + DV+SFGV L ++++ +++ S FLE I
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ----SPPTKFLELIGI 250
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 421 NLQVFSFSDI------KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRL 467
N + FS +D+ + A + + +LG+G FG VY+G + +G A+K +
Sbjct: 5 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTV 63
Query: 468 S-ATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI 526
+ A S + EF NE S+ +++R+LG ++ ++I E + L YL +
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-L 122
Query: 527 RRYVLD--------WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578
R + + K + + + G+ YL +N + +HRDL A N ++ + KI
Sbjct: 123 RPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKI 179
Query: 579 SDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQII 633
DFGM +D+ E + R G G +P PE +K G+++ DV+SFGV+L +I
Sbjct: 180 GDFGMT----RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 634 S 634
+
Sbjct: 235 T 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ LG G FG V + + + AVK L +T +E+ +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D K
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 540 IEG-------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592
+E V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 149 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ LG G FG V + + + AVK L +T +E+ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D K
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 540 IEG-------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592
+E V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 32/244 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKGN-LPRGQE-----FAVKRLSATSTQGLEE-FKNEVSLTAR 487
NN LG G FG V + G+E AVK L +T+ +E +E+ + +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL--------------------FDPI 526
L QH N++ +LG CT ++I EY L +L D
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L+ + ++ V QG+ +L ++ IHRD+ A N+LL N KI DFG+A+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
D + G ++ PE + +Y+++ DV+S+G+LL +I S N Y G
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP-YPGILV 266
Query: 647 NLNF 650
N F
Sbjct: 267 NSKF 270
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHV 491
++ LGEG G V N + AVK + + E K E+ + L H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYV-LDWQKRVNIIEGVTQGLLYL 550
N+++ G+ E + L EY L FD I + + + G++YL
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
+ HRD+K N+LLD N KISDFG+A +FR + E ++ GT YV PE
Sbjct: 121 H---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 611 VK-KGIYSMKYDVYSFGVLLLQIISSK 636
+K + ++ DV+S G++L +++ +
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 17/241 (7%)
Query: 398 GRRNLRTPGTSTPAAEYFDSDTPNLQ-VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL 456
GR NL S + E F + LQ V S D + NF K+GEG G V
Sbjct: 13 GRENLYFQSMSRVSHEQFRA---ALQLVVSPGDPREYLANFI---KIGEGSTGIVCIATE 66
Query: 457 PR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515
G++ AVK++ Q E NEV + H N++ + DE ++ E+L
Sbjct: 67 KHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEG 126
Query: 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN 575
+L D + ++ ++ + V + L YL N VIHRD+K+ +ILL ++
Sbjct: 127 GALT----DIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGR 179
Query: 576 PKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISS 635
K+SDFG K+V + +VGT ++ PE + + Y + D++S G++++++I
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKX--LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 636 K 636
+
Sbjct: 238 E 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ + LG G FG V + + + AVK L +T +E+ +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D+ ++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 540 IE---GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
I V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 147 ICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ + LG G FG V + + + AVK L +T +E+ +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D+ ++
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 540 IE---GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
I V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 147 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGL 475
VF + + A + + +LG+G FG VY+G + +G A+K ++ A S +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 476 EEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIR 527
EF NE S+ +++R+LG ++ ++I E + L YL +P+
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
K + + + G+ YL +N + +HRDL A N ++ + KI DFGM
Sbjct: 124 APP-SLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMT--- 176
Query: 588 RKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 177 -RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 132
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 133 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA----QTHGKWPVKWYAPECI 186
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 37/241 (15%)
Query: 421 NLQVFSFSDI------KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRL 467
N + FS +D+ + A + + +LG+G FG VY+G + +G A+K +
Sbjct: 27 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTV 85
Query: 468 S-ATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--- 523
+ A S + EF NE S+ +++R+LG ++ ++I E + L YL
Sbjct: 86 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 145
Query: 524 -----DPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578
+P+ K + + + G+ YL +N + +HRDL A N ++ + KI
Sbjct: 146 PEMENNPVLA-PPSLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKI 201
Query: 579 SDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQII 633
DFGM +D+ E + R G G +P PE +K G+++ DV+SFGV+L +I
Sbjct: 202 GDFGMT----RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
Query: 634 S 634
+
Sbjct: 257 T 257
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 111/224 (49%), Gaps = 36/224 (16%)
Query: 441 NKLGEGGFG-PVYKGNLPRGQEFAVKRL--SATSTQGLEEFKNEVSLTARLQHVNLLR-- 495
K+GEG FG + + G+++ +K + S S++ EE + EV++ A ++H N+++
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 496 -----------VLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
V+ YC D +++ + + L+ D I LDW
Sbjct: 90 ESFEENGSLYIVMDYCEGGD----LFKRINAQKGVLFQEDQI----LDW---------FV 132
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q L L+ + +++HRD+K+ NI L + ++ DFG+A++ V+ A +GT
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGTPY 190
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648
Y+ PE + Y+ K D+++ G +L ++ + K +A G+ +NL
Sbjct: 191 YLSPEICENKPYNNKSDIWALGCVLYELCTLK-HAFEAGSMKNL 233
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 491
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 492 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 545
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 490
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 491 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK----AQTHGKWPVKWYAPECI 544
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 117/241 (48%), Gaps = 37/241 (15%)
Query: 421 NLQVFSFSDI------KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRL 467
N + FS +D+ + A + + +LG+G FG VY+G + +G A+K +
Sbjct: 5 NPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTV 63
Query: 468 S-ATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI 526
+ A S + EF NE S+ +++R+LG ++ ++I E + L YL +
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-L 122
Query: 527 RRYVLD--------WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578
R + + K + + + G+ YL +N + +HRDL A N ++ + KI
Sbjct: 123 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKI 179
Query: 579 SDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQII 633
DFGM +D+ E + R G G +P PE +K G+++ DV+SFGV+L +I
Sbjct: 180 GDFGMT----RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
Query: 634 S 634
+
Sbjct: 235 T 235
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 443 LGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARL-QHVNLL 494
LG G FG V + + + AVK L +T +E+ + + H+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 495 RVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNIIEG----- 542
+LG CT+ M+I E+ +L YL F P + D K +E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 543 --VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 443 LGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARL-QHVNLL 494
LG G FG V + + + AVK L +T +E+ + + H+N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 495 RVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNIIEG----- 542
+LG CT+ M+I E+ +L YL F P + D K +E
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 543 --VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ LG G FG V + + + AVK L +T +E+ +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D K
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 540 IEG-------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592
+E V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 35/218 (16%)
Query: 443 LGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARL-QHVNLL 494
LG G FG V + + + AVK L +T +E+ + + H+N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 495 RVLGYCTERDENMLIY------------------EYLPNKSLDLYLFDPIRRYVLDWQKR 536
+LG CT+ +++ E++P K DLY + L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLY------KDFLTLEHL 150
Query: 537 VNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
+ V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 442 KLGEGGFGPVYKG--NLPRGQ-EFAVKRL-SATSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+LG G FG V +G + + Q + A+K L T EE E + +L + ++R++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G C + + ML+ E L +L +R + ++ V+ G+ YL+E NF
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE-KNF- 131
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY--GYVPPEYVKKGI 615
+HRDL A N+LL N KISDFG++K D D T R G + + PE +
Sbjct: 132 -VHRDLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPECINFRK 189
Query: 616 YSMKYDVYSFGVLLLQIIS-SKRNARYYGTSENLNFLE 652
+S + DV+S+GV + + +S ++ + E + F+E
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 29/213 (13%)
Query: 442 KLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
+LG+G FG VY+GN + +G+ AVK ++ + S + EF NE S+ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQG 546
R+LG ++ +++ E + + L YL +R R Q+ + + + G
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ YL + +HR+L A N ++ ++ KI DFGM + D+ E + R G G +
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYR-KGGKGLL 194
Query: 607 P-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P PE +K G+++ D++SFGV+L +I S
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 126
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 127 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 180
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 29/213 (13%)
Query: 442 KLGEGGFGPVYKGN---LPRGQ---EFAVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
+LG+G FG VY+GN + +G+ AVK ++ + S + EF NE S+ +++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQG 546
R+LG ++ +++ E + + L YL +R R Q+ + + + G
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRS-LRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+ YL + +HR+L A N ++ ++ KI DFGM + D+ E + R G G +
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYR-KGGKGLL 195
Query: 607 P-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P PE +K G+++ D++SFGV+L +I S
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 146
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 147 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 200
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 25/222 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ LG G FG V + + + AVK L +T +E+ +
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIRRYVLDWQKRVNI 539
+ H+N++ +LG CT+ M+I E+ +L YL F P + D K
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 540 IEG-------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592
+E V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 184 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGL 475
V+ + + A + + +LG+G FG VY+G + +G A+K ++ A S +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 476 EEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLD--- 532
EF NE S+ +++R+LG ++ ++I E + L YL +R + +
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPAMANNPV 121
Query: 533 -----WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
K + + + G+ YL +N + +HRDL A N ++ + KI DFGM
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMT--- 175
Query: 588 RKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 176 -RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 128
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 129 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 182
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 148
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 149 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 202
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 148
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 149 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 202
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 132
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 133 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 186
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 24/221 (10%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTAR 487
+ + LG G FG V + + + AVK L +T +E+ +
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 488 L-QHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL------FDPIR------RYVLDW 533
+ H+N++ +LG CT+ M+I E+ +L YL F P + + L
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 534 QKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593
+ + V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
G ++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRG---QEFAVKRLSA-TSTQGLEEFKNEVSLTARL-Q 489
N+ + +GEG FG V K + + + A+KR+ S +F E+ + +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-------FDPI------RRYVLDWQKR 536
H N++ +LG C R L EY P+ +L +L DP L Q+
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 537 VNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
++ V +G+ YL S + IHRDL A NIL+ KI+DFG+++ V +
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTM 190
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ E + +Y+ DV+S+GVLL +I+S
Sbjct: 191 GRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRG---QEFAVKRLSA-TSTQGLEEFKNEVSLTARL-Q 489
N+ + +GEG FG V K + + + A+KR+ S +F E+ + +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-------FDPI------RRYVLDWQKR 536
H N++ +LG C R L EY P+ +L +L DP L Q+
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 537 VNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
++ V +G+ YL S + IHRDL A NIL+ KI+DFG+++ V +
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV-KKTM 200
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ E + +Y+ DV+S+GVLL +I+S
Sbjct: 201 GRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 442 KLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496
+LG G FG V KG + + + + A +E E ++ +L + ++R+
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
+G C E + ML+ E L+ YL R+V D + + ++ V+ G+ YL+E SNF
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQ--NRHVKD-KNIIELVHQVSMGMKYLEE-SNF 138
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP-----PEYV 611
+HRDL A N+LL + KISDFG++K R D + T+G P PE +
Sbjct: 139 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA----QTHGKWPVKWYAPECI 192
Query: 612 KKGIYSMKYDVYSFGVLLLQIIS 634
+S K DV+SFGVL+ + S
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 37/237 (15%)
Query: 425 FSFSDI------KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-AT 470
FS +D+ + A + + +LG+G FG VY+G + +G A+K ++ A
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAA 61
Query: 471 STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF------- 523
S + EF NE S+ +++R+LG ++ ++I E + L YL
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 121
Query: 524 -DPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582
+P+ K + + + G+ YL +N + +HRDL A N ++ + KI DFG
Sbjct: 122 NNPVLAPP-SLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 583 MAKLFRKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
M +D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 178 MT----RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFK-NEVSLTARLQ 489
++++ F KLG G + VYKG N G A+K + S +G E+SL L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPN---KSLDLYLFDPIRRYVLDWQKRVNIIE----G 542
H N++R+ ++ L++E++ N K +D R + +N+++
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL-----ELNLVKYFQWQ 116
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ QGL + E +++HRDLK N+L++ K+ DFG+A+ F V+ ++ +V
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS-EVVTL 172
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+ P + YS D++S G +L ++I+ K
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 31/223 (13%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGL--EEFKNEVSLTARLQHVNLLRV 496
+G+G F V + N GQ+FAVK + TS+ GL E+ K E S+ L+H +++ +
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLYLQE 552
L + +++E++ L F+ ++R +V + + + + L Y +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 553 YSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGRI----VGTYGY 605
+ +IHRD+K N+LL +N K+ DFG+A + +G + VGT +
Sbjct: 149 NN---IIHRDVKPENVLLASKENSAPVKLGDFGVA------IQLGESGLVAGGRVGTPHF 199
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648
+ PE VK+ Y DV+ GV+L ++S +YGT E L
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERL 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGL 475
V+ + + A + + +LG+G FG VY+G + +G A+K ++ A S +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 476 EEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIR 527
EF NE S+ +++R+LG ++ ++I E + L YL +P+
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
K + + + G+ YL +N + +HRDL A N ++ + KI DFGM
Sbjct: 126 APP-SLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMT--- 178
Query: 588 RKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 179 -RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
F+ +++G+G FG VYKG +E A+K + + +E+ + E+++ ++ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 495 RVLGYCTERDENMLIYEYLPNKS-LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
R G + + +I EYL S LDL P+ + I+ + +GL YL
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLH-- 133
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+ R IHRD+KA+N+LL + + K++DFG+A + N VGT ++ PE +K+
Sbjct: 134 -SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQ 190
Query: 614 GIYSMKYDVYSFGVLLLQI 632
Y K D++S G+ +++
Sbjct: 191 SAYDFKADIWSLGITAIEL 209
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGL 475
V+ + + A + + +LG+G FG VY+G + +G A+K ++ A S +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 476 EEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIR 527
EF NE S+ +++R+LG ++ ++I E + L YL +P+
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
K + + + G+ YL +N + +HRDL A N ++ + KI DFGM
Sbjct: 126 APP-SLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMT--- 178
Query: 588 RKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 179 -RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 442 KLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG+G FG VYK N A K + S + LE++ E+ + A H N++++L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ ++ E+ ++D + + + R + + Q +V + + L YL + ++IH
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KIIH 158
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKGI 615
RDLKA NIL + + K++DFG++ + + ++ +GT ++ PE V K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRP 216
Query: 616 YSMKYDVYSFGVLLLQI 632
Y K DV+S G+ L+++
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G G FG V K R ++ A+K++ + S + + F E+ +R+ H N++++ G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 503 RDENMLIYEYLPNKSL--DLYLFDPIRRYV----LDWQKRVNIIEGVTQGLLYLQEYSNF 556
+ L+ EY SL L+ +P+ Y + W + +QG+ YL
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPK 125
Query: 557 RVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
+IHRDLK N+LL KI DFG A D+ T G+ ++ PE +
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNN-KGSAAWMAPEVFEGSN 180
Query: 616 YSMKYDVYSFGVLLLQIISSKR 637
YS K DV+S+G++L ++I+ ++
Sbjct: 181 YSEKCDVFSWGIILWEVITRRK 202
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 13/197 (6%)
Query: 442 KLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG+G FG VYK N A K + S + LE++ E+ + A H N++++L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ ++ E+ ++D + + + R + + Q +V + + L YL + ++IH
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KIIH 158
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKGI 615
RDLKA NIL + + K++DFG++ + + ++ +GT ++ PE V K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRP 216
Query: 616 YSMKYDVYSFGVLLLQI 632
Y K DV+S G+ L+++
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 108/217 (49%), Gaps = 30/217 (13%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL F+P L + V+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEANT-G 597
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ + D + T G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
R+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 213 RL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 31/225 (13%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGLEEFKNEV 482
+ A + + +LG+G FG VY+G + +G A+K ++ A S + EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA 66
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIRRYVLDWQ 534
S+ +++R+LG ++ ++I E + L YL +P+
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-SLS 125
Query: 535 KRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
K + + + G+ YL +N + +HRDL A N ++ + KI DFGM +D+ E
Sbjct: 126 KMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCMVAEDFTVKIGDFGMT----RDIYET 178
Query: 595 NTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 179 DYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
++N+ +LG+G F V + + G EFA K+LSA Q LE E + +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRK 60
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
LQH N++R+ E + L+++ + L D + R + I+ + + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 117
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
Y +SN ++HR+LK N+LL ++ K++DFG+A + EA G GT G
Sbjct: 118 AYC--HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPG 171
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE +KK YS D+++ GV+L
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVIL 196
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYK-GNLPRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF Y+ ++ + FA K + + E+ E+++ L + +++ G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR + + + QG+ YL N RV
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHK--RRKAVTEPEARYFMRQTIQGVQYLH---NNRV 163
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+++++ KI DFG+A D + T + GT Y+ PE + K +S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVLCKKGHSF 221
Query: 619 KYDVYSFGVLLLQIISSK 636
+ D++S G +L ++ K
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G G FG V K R ++ A+K++ + S + + F E+ +R+ H N++++ G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 503 RDENMLIYEYLPNKSL--DLYLFDPIRRYV----LDWQKRVNIIEGVTQGLLYLQEYSNF 556
+ L+ EY SL L+ +P+ Y + W + +QG+ YL
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVAYLHSMQPK 124
Query: 557 RVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
+IHRDLK N+LL KI DFG A D+ T G+ ++ PE +
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNN-KGSAAWMAPEVFEGSN 179
Query: 616 YSMKYDVYSFGVLLLQIISSKR 637
YS K DV+S+G++L ++I+ ++
Sbjct: 180 YSEKCDVFSWGIILWEVITRRK 201
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
++N+ +LG+G F V + + G EFA K+LSA Q LE E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRK 61
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
LQH N++R+ E + L+++ + L D + R + I+ + + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 118
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
Y +SN ++HR+LK N+LL ++ K++DFG+A + EA G GT G
Sbjct: 119 AYC--HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPG 172
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE +KK YS D+++ GV+L
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
++N+ +LG+G F V + + G EFA K+LSA Q LE E + +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE---REARICRK 61
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
LQH N++R+ E + L+++ + L D + R + I+ + + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 118
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
Y +SN ++HR+LK N+LL ++ K++DFG+A + EA G GT G
Sbjct: 119 AYC--HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPG 172
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE +KK YS D+++ GV+L
Sbjct: 173 YLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
++N+ +LG+G F V + + G EFA K+LSA Q LE E + +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 84
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
LQH N++R+ E + L+++ + L D + R + I+ + + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESI 141
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
Y +SN ++HR+LK N+LL ++ K++DFG+A + EA G GT G
Sbjct: 142 AYC--HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG-FAGTPG 195
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE +KK YS D+++ GV+L
Sbjct: 196 YLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 431 KAATNNFSSANK---LGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTA 486
+ A N+F + +K LG G FG V+K G + A K + + EE KNE+S+
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 487 RLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI--RRYVLDWQKRVNIIEGVT 544
+L H NL+++ +++ +L+ EY+ LFD I Y L + ++ +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQIC 197
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNE--LNPKISDFGMAKLFR-KDVDEANTGRIVG 601
+G+ ++ + ++H DLK NIL N KI DFG+A+ ++ ++ + N G
Sbjct: 198 EGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN----FG 250
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T ++ PE V S D++S GV+ ++S
Sbjct: 251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 443 LGEGGFGPVY-----KGNLPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARLQHVNLLRV 496
LGEG FG V N G+ AVK L L ++ E+ + L H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 497 LGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL--QE 552
G C ++ E L+ EY+P SL YL R+ + + + + + +G+ YL Q
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP----- 607
Y IHR L A N+LLDN+ KI DFG+AK V E + V G P
Sbjct: 133 Y-----IHRALAARNVLLDNDRLVKIGDFGLAKA----VPEGHEYYRVREDGDSPVFWYA 183
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K+ + DV+SFGV L ++++
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 443 LGEGGFGPVY-----KGNLPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARLQHVNLLRV 496
LGEG FG V N G+ AVK L L ++ E+ + L H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 497 LGYCTERDEN--MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL--QE 552
G C ++ E L+ EY+P SL YL R+ + + + + + +G+ YL Q
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP----- 607
Y IHR L A N+LLDN+ KI DFG+AK V E + V G P
Sbjct: 132 Y-----IHRALAARNVLLDNDRLVKIGDFGLAKA----VPEGHEYYRVREDGDSPVFWYA 182
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K+ + DV+SFGV L ++++
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 442 KLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+LG+G FG VYK N A K + S + LE++ E+ + A H N++++L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ ++ E+ ++D + + + R + + Q +V + + L YL + ++IH
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KIIH 158
Query: 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKGI 615
RDLKA NIL + + K++DFG++ + + + +GT ++ PE V K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDX--FIGTPYWMAPEVVMCETSKDRP 216
Query: 616 YSMKYDVYSFGVLLLQI 632
Y K DV+S G+ L+++
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 40/250 (16%)
Query: 398 GRRNLRTPGTSTPAAEYFDSD---TPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG 454
GR NL YF D TP + F S + + KLG G +G V
Sbjct: 10 GRENL-----------YFQGDLQATPGM--FITSKKGHLSEMYQRVKKLGSGAYGEVL-- 54
Query: 455 NLPRGQ----EFAVK--RLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508
L R + E A+K R ++ ST + EV++ L H N++++ + ++ L
Sbjct: 55 -LCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113
Query: 509 IYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASN 567
+ E L FD I R + II+ V G+ YL +++ ++HRDLK N
Sbjct: 114 VMECYKGGEL----FDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPEN 166
Query: 568 ILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYS 624
+LL+++ KI DFG++ +F ++ +GT Y+ PE ++K Y K DV+S
Sbjct: 167 LLLESKEKDALIKIVDFGLSAVFE---NQKKMKERLGTAYYIAPEVLRKK-YDEKCDVWS 222
Query: 625 FGVLLLQIIS 634
GV+L +++
Sbjct: 223 IGVILFILLA 232
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVKRLS-ATSTQGLEEFK-NEVSLTARLQHVNLL 494
+ K+GEG +G VYK G+ FA+K++ +G+ E+S+ L+H N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG----VTQGLLYL 550
++ + +L++E+L D +K +++ EG VT L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLL 107
Query: 551 QEYSNF------RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q + RV+HRDLK N+L++ E KI+DFG+A+ F V + T IV +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEIVTLWY 166
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
P + YS D++S G + ++++ + G SE
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG--TPLFPGVSE 206
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea
pdb|3G6M|A Chain A, Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea In Complex With
A Potent Inhibitor Caffeine
Length = 406
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 164/351 (46%), Gaps = 64/351 (18%)
Query: 36 GREFPLSDINSALFTHLICAFA--EVDSSTYQLSISSANQQYFS------IFANS----- 82
GR F +D+ ++ H++ +F VD + Y + ++++S I N+
Sbjct: 34 GRNFQPADLQASKILHVLYSFMNLRVDGTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVK 93
Query: 83 ----VRRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRT 138
+++ N S+K +LSI ST N P+ S+ + R +F ++++
Sbjct: 94 QLYKLKKANRSLKIMLSIGGWTWST--------NF-PAAAST----EATRATFAKTAVEF 140
Query: 139 ARLYGFQGIDLFWLWPNS-TDLNSLGILL-------DEWKASASDQPELTLSMAVRYSPT 190
+ +GF GID+ W +P S TD N++ +LL D + A+ ++ LS+A P+
Sbjct: 141 MKDWGFDGIDVDWEYPASETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPS 200
Query: 191 HETVS--YPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALY----NPSSN-ISTDFGI 243
H V + S+ N+N L+AYDY S ++V+G LY NPSS ST +
Sbjct: 201 HYNVLKLAQLGSVLDNIN---LMAYDY-AGSWDSVSGHQTNLYPSTSNPSSTPFSTKAAV 256
Query: 244 REWLRRGFPANKLVLG----ARA----SGPGITIDGSMGYKFIRAFIQNYGY----GAAP 291
++ G PA+K++LG RA GPG ++G + I +Y GA
Sbjct: 257 DAYIAAGVPASKIILGMPIYGRAFVGTDGPGKPYS-TIGEGSWESGIWDYKVLPKAGATV 315
Query: 292 VYN--ASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340
+ + A + +S T I++D + ++ K+SYAK L G ++ S D
Sbjct: 316 ITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASAD 366
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATST-QGLEEFK-NEVSLTARL 488
+ + K+GEG +G VYK +G+ A+KR+ + +G+ E+SL L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLL 548
H N++ ++ L++E++ K L L D + + D Q ++ + + + +G+
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVA 133
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
+ ++ R++HRDLK N+L++++ K++DFG+A+ F V + T +V + P
Sbjct: 134 HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPD 189
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+ YS D++S G + ++I+ K
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+F +G GGFG V+K + G+ + +KR+ + E+ + EV A+L HVN++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIV 67
Query: 495 RVLGYC--------------TERDENMLIY---EYLPNKSLDLYLFDPIRRYVLDWQKRV 537
G C + R + ++ E+ +L+ ++ + R LD +
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLAL 125
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597
+ E +T+G+ Y+ ++I+RDLK SNI L + KI DFG+ + D
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRX 179
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
R GT Y+ PE + Y + D+Y+ G++L +++
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 14/218 (6%)
Query: 442 KLGEGGFGPVYKG--NLPRGQ-EFAVKRL-SATSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+LG G FG V +G + + Q + A+K L T EE E + +L + ++R++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G C + + ML+ E L +L +R + ++ V+ G+ YL+E NF
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE-KNF- 457
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY--GYVPPEYVKKGI 615
+HR+L A N+LL N KISDFG++K D D T R G + + PE +
Sbjct: 458 -VHRNLAARNVLLVNRHYAKISDFGLSKALGAD-DSYYTARSAGKWPLKWYAPECINFRK 515
Query: 616 YSMKYDVYSFGVLLLQIIS-SKRNARYYGTSENLNFLE 652
+S + DV+S+GV + + +S ++ + E + F+E
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 443 LGEGGFGPVYKGN-LPRGQEFAVKRL-----SATSTQGLEEFKNEVSLTARLQHVNLLRV 496
LG G FG V+KG +P G+ + + Q + + + L H +++R+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRY--VLDWQKRVNIIEGVTQGLLYLQEYS 554
LG C L+ +YLP SL D +R++ L Q +N + +G+ YL+E+
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
++HR+L A N+LL + +++DFG+A L D + ++ E + G
Sbjct: 136 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 192
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
Y+ + DV+S+GV + ++++
Sbjct: 193 KYTHQSDVWSYGVTVWELMT 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATST-QGLEEFK-NEVSLTARL 488
+ + K+GEG +G VYK +G+ A+KR+ + +G+ E+SL L
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLL 548
H N++ ++ L++E++ K L L D + + D Q ++ + + + +G+
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVA 133
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
+ ++ R++HRDLK N+L++++ K++DFG+A+ F V + T +V + P
Sbjct: 134 HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSYTHEVVTLWYRAPD 189
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+ YS D++S G + ++I+ K
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRG---QEFAVKRLSA-TSTQGLEEFKNEVSLTARL-Q 489
N+ + +GEG FG V K + + + A+KR+ S +F E+ + +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-------FDPI------RRYVLDWQKR 536
H N++ +LG C R L EY P+ +L +L DP L Q+
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 537 VNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
++ V +G+ YL S + IHR+L A NIL+ KI+DFG+++ V +
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV-KKTM 197
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ E + +Y+ DV+S+GVLL +I+S
Sbjct: 198 GRL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
F+ K+G+G FG V+KG R Q+ A+K + + +E+ + E+++ ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 495 RVLGYCTERDENMLIYEYLPNKS-LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ G + + +I EYL S LDL P LD + I+ + +GL YL
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH-- 121
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+ + IHRD+KA+N+LL K++DFG+A + NT VGT ++ PE +K+
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 178
Query: 614 GIYSMKYDVYSFGVLLLQI 632
Y K D++S G+ +++
Sbjct: 179 SAYDSKADIWSLGITAIEL 197
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 22/226 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEF-AVKRLSA-TSTQGLE-EFKNEVSLTARL 488
A + ++GEG +G V+K +L G F A+KR+ T +G+ EV++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 489 Q---HVNLLRVLGYCT----ERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
+ H N++R+ CT +R+ + L++E++ ++ L YL D + + + +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL +L + RV+HRDLK NIL+ + K++DFG+A+++ + +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
T Y PE + + Y+ D++S G + ++ +R + G+S+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSD 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 443 LGEGGFGPVYKGN-LPRGQEFAVKRL-----SATSTQGLEEFKNEVSLTARLQHVNLLRV 496
LG G FG V+KG +P G+ + + Q + + + L H +++R+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRY--VLDWQKRVNIIEGVTQGLLYLQEYS 554
LG C L+ +YLP SL D +R++ L Q +N + +G+ YL+E+
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
++HR+L A N+LL + +++DFG+A L D + ++ E + G
Sbjct: 154 ---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG 210
Query: 615 IYSMKYDVYSFGVLLLQIIS 634
Y+ + DV+S+GV + ++++
Sbjct: 211 KYTHQSDVWSYGVTVWELMT 230
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 31/232 (13%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRG-------QEFAVKRLS-ATSTQGL 475
V+ + + A + + +LG+G FG VY+G + +G A+K ++ A S +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRER 59
Query: 476 EEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIR 527
EF NE S+ +++R+LG ++ ++I E + L YL +P+
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587
K + + + G+ YL +N + +HRDL A N + + KI DFGM
Sbjct: 120 APP-SLSKMIQMAGEIADGMAYLN--AN-KFVHRDLAARNCXVAEDFTVKIGDFGMT--- 172
Query: 588 RKDVDEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+D+ E + R G G +P PE +K G+++ DV+SFGV+L +I +
Sbjct: 173 -RDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYK-GNLPRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF Y+ ++ + FA K + + E+ E+++ L + +++ G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR + + + QG+ YL N RV
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHK--RRKAVTEPEARYFMRQTIQGVQYLH---NNRV 163
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+++++ KI DFG+A + + D + GT Y+ PE + K +S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 619 KYDVYSFGVLLLQIISSK 636
+ D++S G +L ++ K
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEV 482
V D ++ +NF K+GEG G V + G+ AVK++ Q E NEV
Sbjct: 16 VVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 72
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ QH N++ + DE ++ E+L +L D + ++ ++ +
Sbjct: 73 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLA 128
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V Q L L VIHRD+K+ +ILL ++ K+SDFG K+V +VGT
Sbjct: 129 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGT 183
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE + + Y + D++S G+++++++ +
Sbjct: 184 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 29/210 (13%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVKRLS-ATSTQGLEEFK-NEVSLTARLQHVNLL 494
+ K+GEG +G VYK G+ FA+K++ +G+ E+S+ L+H N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG----VTQGLLYL 550
++ + +L++E+L D +K +++ EG VT L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLL 107
Query: 551 QEYSNF------RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q + RV+HRDLK N+L++ E KI+DFG+A+ F V + T +V +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEVVTLWY 166
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P + YS D++S G + ++++
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVKRLS-ATSTQGLEEFK-NEVSLTARLQHVNLL 494
+ K+GEG +G VYK G+ FA+K++ +G+ E+S+ L+H N++
Sbjct: 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG----VTQGLLYL 550
++ + +L++E+L D +K +++ EG VT L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQ----------------DLKKLLDVCEGGLESVTAKSFLL 107
Query: 551 QEYSNF------RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q + RV+HRDLK N+L++ E KI+DFG+A+ F V + T +V +
Sbjct: 108 QLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY-THEVVTLWY 166
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
P + YS D++S G + ++++ + G SE
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG--TPLFPGVSE 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 23/226 (10%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFK----NEVSLTARL 488
AT+ + ++G G +G VYK P F + S G E EV+L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK-SVRVPNGEEGLPISTVREVALLRRL 60
Query: 489 Q---HVNLLRVLGYC----TERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
+ H N++R++ C T+R+ + L++E++ ++ L YL D L + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+GL +L ++N ++HRDLK NIL+ + K++DFG+A+++ + A +V
Sbjct: 119 RQFLRGLDFL--HANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAP---VV 172
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
T Y PE + + Y+ D++S G + ++ +R + G SE
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEV 482
V D ++ +NF K+GEG G V + G+ AVK++ Q E NEV
Sbjct: 23 VVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 79
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ QH N++ + DE ++ E+L +L D + ++ ++ +
Sbjct: 80 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLA 135
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V Q L L VIHRD+K+ +ILL ++ K+SDFG K+V +VGT
Sbjct: 136 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGT 190
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE + + Y + D++S G+++++++ +
Sbjct: 191 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEV 482
V D ++ +NF K+GEG G V + G+ AVK++ Q E NEV
Sbjct: 12 VVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 68
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ QH N++ + DE ++ E+L +L D + ++ ++ +
Sbjct: 69 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLA 124
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V Q L L VIHRD+K+ +ILL ++ K+SDFG K+V +VGT
Sbjct: 125 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGT 179
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE + + Y + D++S G+++++++ +
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 108/204 (52%), Gaps = 24/204 (11%)
Query: 443 LGEGGFGPVYKGN-LPRGQ----EFAVKRLSA-TSTQGLEEFKNEVSLTARLQHVNLLRV 496
LG G FG VYKG +P G+ A+K L TS + +E +E + A + + R+
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIR--RYVLDWQKRVNIIEGVTQGLLYLQEYS 554
LG C L+ + +P L D +R R L Q +N + +G+ YL+
Sbjct: 85 LGICLTSTVQ-LVTQLMPYGCL----LDHVRENRGRLGSQDLLNWCMQIAKGMSYLE--- 136
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE----ANTGRIVGTYGYVPPEY 610
+ R++HRDL A N+L+ + + KI+DFG+A+L D+DE A+ G++ ++ E
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLL--DIDETEYHADGGKV--PIKWMALES 192
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ + ++ + DV+S+GV + ++++
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 22/226 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEF-AVKRLSA-TSTQGLE-EFKNEVSLTARL 488
A + ++GEG +G V+K +L G F A+KR+ T +G+ EV++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 489 Q---HVNLLRVLGYCT----ERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
+ H N++R+ CT +R+ + L++E++ ++ L YL D + + + +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL +L + RV+HRDLK NIL+ + K++DFG+A+++ + +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
T Y PE + + Y+ D++S G + ++ +R + G+S+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSD 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 13/199 (6%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
F+ K+G+G FG V+KG R Q+ A+K + + +E+ + E+++ ++ +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 495 RVLGYCTERDENMLIYEYLPNKS-LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ G + + +I EYL S LDL P LD + I+ + +GL YL
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH-- 141
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+ + IHRD+KA+N+LL K++DFG+A + NT VGT ++ PE +K+
Sbjct: 142 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQ 198
Query: 614 GIYSMKYDVYSFGVLLLQI 632
Y K D++S G+ +++
Sbjct: 199 SAYDSKADIWSLGITAIEL 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 22/226 (9%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEF-AVKRLSA-TSTQGLE-EFKNEVSLTARL 488
A + ++GEG +G V+K +L G F A+KR+ T +G+ EV++ L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 489 Q---HVNLLRVLGYCT----ERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
+ H N++R+ CT +R+ + L++E++ ++ L YL D + + + +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL +L + RV+HRDLK NIL+ + K++DFG+A+++ + +V
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
T Y PE + + Y+ D++S G + ++ +R + G+S+
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSD 224
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYK-GNLPRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF Y+ ++ + FA K + + E+ E+++ L + +++ G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR + + + QG+ YL N RV
Sbjct: 110 FFEDDDFVYVVLEICRRRSL-LELHK--RRKAVTEPEARYFMRQTIQGVQYLH---NNRV 163
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+++++ KI DFG+A + + D + GT Y+ PE + K +S
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 619 KYDVYSFGVLLLQIISSK 636
+ D++S G +L ++ K
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+N +G G +G VYKG+L + AVK S + Q KN + ++H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE-RPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 495 R-VLG----YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
R ++G R E +L+ EY PN SL YL + DW + VT+GL Y
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAY 126
Query: 550 LQ------EYSNFRVIHRDLKASNILLDNELNPKISDFGMA------KLFRKDVDEANTG 597
L ++ + HRDL + N+L+ N+ ISDFG++ +L R ++
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 598 RIVGTYGYVPPEYVKKGI-------YSMKYDVYSFGVLLLQI 632
VGT Y+ PE ++ + + D+Y+ G++ +I
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 441 NKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+LG+G F V + + GQE+A K+LSA Q LE E + L+H N++
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIV 84
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
R+ +E + LI++ + L D + R + I+ + + +L+ +
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 555 NFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV 611
V+HRDLK N+LL ++L K++DFG+A + ++ GT GY+ PE +
Sbjct: 142 ---VVHRDLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 612 KKGIYSMKYDVYSFGVLL 629
+K Y D+++ GV+L
Sbjct: 197 RKDPYGKPVDLWACGVIL 214
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEV 482
V D ++ +NF K+GEG G V + G+ AVK++ Q E NEV
Sbjct: 21 VVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 77
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ QH N++ + DE ++ E+L +L D + ++ ++ +
Sbjct: 78 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLA 133
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V Q L L VIHRD+K+ +ILL ++ K+SDFG K+V +VGT
Sbjct: 134 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGT 188
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE + + Y + D++S G+++++++ +
Sbjct: 189 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 13/199 (6%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
F+ ++G+G FG V+KG R Q+ A+K + + +E+ + E+++ ++ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 495 RVLGYCTERDENMLIYEYLPNKS-LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ G + + +I EYL S LDL P + + +++ + +GL YL
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI-----ATMLKEILKGLDYLHSE 139
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+ IHRD+KA+N+LL + + K++DFG+A + NT VGT ++ PE +++
Sbjct: 140 ---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQ 194
Query: 614 GIYSMKYDVYSFGVLLLQI 632
Y K D++S G+ +++
Sbjct: 195 SAYDSKADIWSLGITAIEL 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 32/244 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKGN------LPRGQEFAVKRLSATS-TQGLEEFKNEVSLTAR 487
N LG G FG V + AVK L + + E +E+ + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 488 L-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDW-----QKRVNIIE 541
L H N++ +LG CT LI+EY L YL ++ D QKR+ E
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 542 G---------------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
V +G+ +L+ S +HRDL A N+L+ + KI DFG+A+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
D + G ++ PE + +GIY++K DV+S+G+LL +I S N Y G
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP-YPGIPV 280
Query: 647 NLNF 650
+ NF
Sbjct: 281 DANF 284
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYK-GNLPRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF Y+ ++ + FA K + + E+ E+++ L + +++ G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR + + + QG+ YL N RV
Sbjct: 94 FFEDDDFVYVVLEICRRRSL-LELHK--RRKAVTEPEARYFMRQTIQGVQYLH---NNRV 147
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+++++ KI DFG+A + + D + GT Y+ PE + K +S
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 619 KYDVYSFGVLLLQIISSK 636
+ D++S G +L ++ K
Sbjct: 206 EVDIWSLGCILYTLLVGK 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
T+ + +G+G F V + L G E+A K+LSA Q LE E +
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
L+H N++R+ +E + L+++ + L D + R + I+ + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 116
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
L+ + V+HRDLK N+LL ++ K++DFG+A + D +A G GT G
Sbjct: 117 LHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWFG-FAGTPG 171
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE ++K Y D+++ GV+L
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 37/229 (16%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++F LG+G FG V K N + +A+K++ T + L +EV L A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 493 LLRVLGYCTER------------DENMLI-YEYLPNKSLDLYLFDPIRRYVLDWQKRV-- 537
++R ER + I EY N++L +D I L+ Q+
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLIHSENLNQQRDEYW 119
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD----- 592
+ + + L Y+ +IHRDLK NI +D N KI DFG+AK + +D
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 593 -------EANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQII 633
N +GT YV E + G Y+ K D+YS G++ ++I
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
T + +LG+G F V + + GQE+A K+LSA Q LE E +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
L+H N++R+ +E + LI++ + L D + R + I+ + + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
L+ + V+HR+LK N+LL ++L K++DFG+A + ++ GT G
Sbjct: 124 LHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA--IEVEGEQQAWFGFAGTPG 178
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE ++K Y D+++ GV+L
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Query: 476 EEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL---DLYLFDPIRRYV-- 530
++FKNE+ + +++ L G T DE +IYEY+ N S+ D Y F + Y
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 531 LDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590
+ Q II+ V Y+ N + HRD+K SNIL+D K+SDFG ++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYM--- 202
Query: 591 VDEANTGRIVGTYGYVPPEYV--KKGIYSMKYDVYSFGVLL 629
VD+ G GTY ++PPE+ + K D++S G+ L
Sbjct: 203 VDKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEV 482
V D ++ +NF K+GEG G V + G+ AVK++ Q E NEV
Sbjct: 66 VVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 122
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ QH N++ + DE ++ E+L +L D + ++ ++ +
Sbjct: 123 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLA 178
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V Q L L VIHRD+K+ +ILL ++ K+SDFG K+V +VGT
Sbjct: 179 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGT 233
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE + + Y + D++S G+++++++ +
Sbjct: 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF ++ + +E ++ S E+ E+S+ L H +++ G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR L + + + G YL RV
Sbjct: 89 FFEDNDFVFVVLELCRRRSL-LELHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+ +L KI DFG+A D + T + GT Y+ PE + K +S
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 200
Query: 619 KYDVYSFGVLLLQIISSK 636
+ DV+S G ++ ++ K
Sbjct: 201 EVDVWSIGCIMYTLLVGK 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF ++ + +E ++ S E+ E+S+ L H +++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR L + + + G YL RV
Sbjct: 85 FFEDNDFVFVVLELCRRRSL-LELHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+ +L KI DFG+A D + T + GT Y+ PE + K +S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 619 KYDVYSFGVLLLQIISSK 636
+ DV+S G ++ ++ K
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFK----NEVSLTARL 488
AT+ + ++G G +G VYK P F + S G E EV+L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK-SVRVPNGEEGLPISTVREVALLRRL 60
Query: 489 Q---HVNLLRVLGYC----TERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
+ H N++R++ C T+R+ + L++E++ ++ L YL D L + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+GL +L ++N ++HRDLK NIL+ + K++DFG+A+++ + +V
Sbjct: 119 RQFLRGLDFL--HANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVV 172
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
T Y PE + + Y+ D++S G + ++ +R + G SE
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 416 DSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQG 474
+ + P+LQ IK +F LG+G FG V+ + Q FA+K L
Sbjct: 5 NKERPSLQ------IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM 58
Query: 475 LEEFKNEVS----LTARLQHVNLLRVLGYCT-ERDENML-IYEYLPNKSLDLYLFDPIRR 528
++ + + L+ +H L + +CT + EN+ + EYL L +Y +
Sbjct: 59 DDDVECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDL-MYHIQSCHK 115
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
+ D + + GL +L +++RDLK NILLD + + KI+DFGM K
Sbjct: 116 F--DLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--E 168
Query: 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
+ +A T GT Y+ PE + Y+ D +SFGVLL +++ + + ++G E
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDEE 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 446 GGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505
G FG V+K L +F ++ + + + E+ T ++H NLL+ + +R
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIA-AEKRGS 82
Query: 506 NMLIYEYLPNKSLDL-YLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF-------- 556
N+ + +L D L D ++ ++ W + ++ E +++GL YL E +
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKP 142
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI- 615
+ HRD K+ N+LL ++L ++DFG+A F +T VGT Y+ PE ++ I
Sbjct: 143 SIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAIN 202
Query: 616 ----YSMKYDVYSFGVLLLQIISSKRNA 639
++ D+Y+ G++L +++S + A
Sbjct: 203 FQRDAFLRIDMYAMGLVLWELVSRCKAA 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF ++ + +E ++ S E+ E+S+ L H +++ G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR L + + + G YL RV
Sbjct: 85 FFEDNDFVFVVLELCRRRSL-LELHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+ +L KI DFG+A D + T + GT Y+ PE + K +S
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLSKKGHSF 196
Query: 619 KYDVYSFGVLLLQIISSK 636
+ DV+S G ++ ++ K
Sbjct: 197 EVDVWSIGCIMYTLLVGK 214
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL ++P L + V+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 200
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 201 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL ++P L + V+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 211
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 212 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL ++P L + V+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 203
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 204 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL---FDPIRRYV----------LDWQKRVNI 539
++ +LG CT+ +I EY +L YL P Y L + V+
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 196
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 197 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEV 482
V D ++ +NF K+GEG G V + G+ AVK++ Q E NEV
Sbjct: 143 VVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEV 199
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ QH N++ + DE ++ E+L +L D + ++ ++ +
Sbjct: 200 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLA 255
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V Q L L VIHRD+K+ +ILL ++ K+SDFG K+V +VGT
Sbjct: 256 VLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX--LVGT 310
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
++ PE + + Y + D++S G+++++++ +
Sbjct: 311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL ++P L + V+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 204
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 205 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL---FDPIRRYV----------LDWQKRVNI 539
++ +LG CT+ +I EY +L YL P Y L + V+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 211
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 212 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL ++P L + V+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 211
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 212 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 24/245 (9%)
Query: 399 RRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPV--YKGNL 456
R GTS ++ + TP + V + I ++ + LG+G FG V K +
Sbjct: 16 RSRGHAAGTSGGPGDHLHA-TPGMFVQHSTAI--FSDRYKGQRVLGKGSFGEVILCKDKI 72
Query: 457 PRGQEFAVKRLSATSTQ---GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513
GQE AVK +S + E EV L +L H N++++ + ++ L+ E
Sbjct: 73 T-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY 131
Query: 514 PNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN 572
L FD I R II V G+ Y+ + +++HRDLK N+LL++
Sbjct: 132 TGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLES 184
Query: 573 ---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLL 629
+ N +I DFG++ F + +GT Y+ PE V G Y K DV+S GV+L
Sbjct: 185 KSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 240
Query: 630 LQIIS 634
++S
Sbjct: 241 YILLS 245
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 24/245 (9%)
Query: 399 RRNLRTPGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPV--YKGNL 456
R GTS ++ + TP + V + I ++ + LG+G FG V K +
Sbjct: 17 RSRGHAAGTSGGPGDHLHA-TPGMFVQHSTAI--FSDRYKGQRVLGKGSFGEVILCKDKI 73
Query: 457 PRGQEFAVKRLSATSTQ---GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513
GQE AVK +S + E EV L +L H N++++ + ++ L+ E
Sbjct: 74 T-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVY 132
Query: 514 PNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN 572
L FD I R II V G+ Y+ + +++HRDLK N+LL++
Sbjct: 133 TGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLES 185
Query: 573 ---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLL 629
+ N +I DFG++ F + +GT Y+ PE V G Y K DV+S GV+L
Sbjct: 186 KSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVIL 241
Query: 630 LQIIS 634
++S
Sbjct: 242 YILLS 246
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+F +G GGFG V+K + G+ + ++R+ + E+ + EV A+L HVN++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIV 68
Query: 495 RVLG------YCTE-RDENMLIYEYLP--------NKSLDLYL-------------FDPI 526
G Y E D+++ +Y P +K+ L++ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
R LD + + E +T+G+ Y+ + ++IHRDLK SNI L + KI DFG+
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
+ D R GT Y+ PE + Y + D+Y+ G++L +++
Sbjct: 186 LKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
F+ K+G+G FG V+KG R Q+ A+K + + +E+ + E+++ ++ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 495 RVLGYCTERDENMLIYEYLPNKS-LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ G + + +I EYL S LDL P LD + I+ + +GL YL
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH-- 136
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+ + IHRD+KA+N+LL K++DFG+A + N VGT ++ PE +K+
Sbjct: 137 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQ 193
Query: 614 GIYSMKYDVYSFGVLLLQI 632
Y K D++S G+ +++
Sbjct: 194 SAYDSKADIWSLGITAIEL 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLS-ATSTQGLEEFKNEVSLTARLQHVNLL 494
F+ K+G+G FG V+KG R Q+ A+K + + +E+ + E+++ ++ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 495 RVLGYCTERDENMLIYEYLPNKS-LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ G + + +I EYL S LDL P LD + I+ + +GL YL
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH-- 121
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+ + IHRD+KA+N+LL K++DFG+A + N VGT ++ PE +K+
Sbjct: 122 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQ 178
Query: 614 GIYSMKYDVYSFGVLLLQI 632
Y K D++S G+ +++
Sbjct: 179 SAYDSKADIWSLGITAIEL 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 434 TNNFSSANKLGEGGFGPV--YKGNLPRGQEFAVKRLSATSTQ---GLEEFKNEVSLTARL 488
++ + LG+G FG V K + GQE AVK +S + E EV L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGL 547
H N++++ + ++ L+ E L FD I R II V G+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 548 LYLQEYSNFRVIHRDLKASNILLDN---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Y+ + +++HRDLK N+LL++ + N +I DFG++ F + +GT
Sbjct: 140 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAY 193
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
Y+ PE V G Y K DV+S GV+L ++S
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 32/218 (14%)
Query: 443 LGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL-QHVN 492
LGEG FG V K R + AVK L + +T+ L + +E+ + + +H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYL-----------FDPIR--RYVLDWQKRVNI 539
++ +LG CT+ +I EY +L YL ++P L + V+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---EANT 596
V +G+ YL ++ + IHRDL A N+L+ + KI+DFG+A+ +D +
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH-IDYYKKTTN 252
Query: 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
GR+ ++ PE + IY+ + DV+SFGVLL +I +
Sbjct: 253 GRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 434 TNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQ---GLEEFKNEVSLTARLQ 489
++ + LG+G FG V + GQE AVK +S + E EV L +L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLL 548
H N++++ + ++ L+ E L FD I R II V G+
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 549 YLQEYSNFRVIHRDLKASNILLDN---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
Y+ + +++HRDLK N+LL++ + N +I DFG++ F + +GT Y
Sbjct: 147 YMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGTAYY 200
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ PE V G Y K DV+S GV+L ++S
Sbjct: 201 IAPE-VLHGTYDEKCDVWSTGVILYILLS 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 23/226 (10%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFK----NEVSLTARL 488
AT+ + ++G G +G VYK P F + S G E EV+L RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK-SVRVPNGEEGLPISTVREVALLRRL 60
Query: 489 Q---HVNLLRVLGYC----TERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
+ H N++R++ C T+R+ + L++E++ ++ L YL D L + +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLM 118
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+GL +L ++N ++HRDLK NIL+ + K++DFG+A+++ + +V
Sbjct: 119 RQFLRGLDFL--HANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVV 172
Query: 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
T Y PE + + Y+ D++S G + ++ +R + G SE
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNL--PRGQE----FAVKRLSA-TSTQGLEEFKNEVSLTAR 487
N LGEG FG V K +G+ AVK L S L + +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------------------FDPI 526
+ H +++++ G C++ +LI EY SL +L D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L ++ ++QG+ YL E S ++HRDL A NIL+ KISDFG++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLS-- 197
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIIS 634
+DV E ++ + + G +P +++ IY+ + DV+SFGVLL +I++
Sbjct: 198 --RDVYEEDS-XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 25/238 (10%)
Query: 416 DSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQG 474
+ + P+LQ IK +F LG+G FG V+ + Q FA+K L
Sbjct: 4 NKERPSLQ------IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM 57
Query: 475 LEEFKNEVS----LTARLQHVNLLRVLGYCT-ERDENML-IYEYLPNKSLDLYLFDPIRR 528
++ + + L+ +H L + +CT + EN+ + EYL L +Y +
Sbjct: 58 DDDVECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDL-MYHIQSCHK 114
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
+ D + + GL +L +++RDLK NILLD + + KI+DFGM K
Sbjct: 115 F--DLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK--E 167
Query: 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ +A T GT Y+ PE + Y+ D +SFGVLL +++ + + ++G E
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ--SPFHGQDE 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 480 NEVSLTARLQHVNLLRVLGYCTERDENML--IYEYLPNKSLDLYLFDPIR-RYVLDWQKR 536
+EV+L L+H N++R +R L + EY L + + R LD +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 537 VNIIEGVTQGLLYLQEYSN--FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
+ ++ +T L S+ V+HRDLK +N+ LD + N K+ DFG+A++ D A
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T VGT Y+ PE + + Y+ K D++S G LL ++ +
Sbjct: 174 KT--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 37/229 (16%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++F LG+G FG V K N + +A+K++ T + L +EV L A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQY 63
Query: 493 LLRVLGYCTER------------DENMLI-YEYLPNKSLDLYLFDPIRRYVLDWQKRV-- 537
++R ER + I EY N +L +D I L+ Q+
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQRDEYW 119
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD----- 592
+ + + L Y+ +IHRDLK NI +D N KI DFG+AK + +D
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 593 -------EANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQII 633
N +GT YV E + G Y+ K D+YS G++ ++I
Sbjct: 177 SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
LG+G +G VY G +L A+K + ++ + E++L L+H N+++ LG +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 502 ERDENMLIYEYLPNKSLDLYL---FDPIRRYVLDWQKRVNI-IEGVTQGLLYLQEYSNFR 557
E + E +P SL L + P++ D ++ + + + +GL YL + +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 558 VIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI- 615
++HRD+K N+L++ KISDFG +K R T GT Y+ PE + KG
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 616 -YSMKYDVYSFGVLLLQIISSK 636
Y D++S G ++++ + K
Sbjct: 187 GYGKAADIWSLGCTIIEMATGK 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNL--PRGQE----FAVKRLSA-TSTQGLEEFKNEVSLTAR 487
N LGEG FG V K +G+ AVK L S L + +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------------------FDPI 526
+ H +++++ G C++ +LI EY SL +L D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L ++ ++QG+ YL E +++HRDL A NIL+ KISDFG++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLS-- 197
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIIS 634
+DV E ++ + + G +P +++ IY+ + DV+SFGVLL +I++
Sbjct: 198 --RDVYEEDS-XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
LG+G +G VY G +L A+K + ++ + E++L L+H N+++ LG +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 502 ERDENMLIYEYLPNKSLDLYL---FDPIRRYVLDWQKRVNI-IEGVTQGLLYLQEYSNFR 557
E + E +P SL L + P++ D ++ + + + +GL YL + +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 558 VIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI- 615
++HRD+K N+L++ KISDFG +K R T GT Y+ PE + KG
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 616 -YSMKYDVYSFGVLLLQIISSK 636
Y D++S G ++++ + K
Sbjct: 201 GYGKAADIWSLGCTIIEMATGK 222
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 443 LGE-GGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+GE G FG VYK N A K + S + LE++ E+ + A H N++++L
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ ++ E+ ++D + + + R + + Q +V + + L YL + ++IH
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KIIH 131
Query: 561 RDLKASNILLDNELNPKISDFGM-AKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKG 614
RDLKA NIL + + K++DFG+ AK R + ++ +GT ++ PE V K
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS--FIGTPYWMAPEVVMCETSKDR 189
Query: 615 IYSMKYDVYSFGVLLLQI 632
Y K DV+S G+ L+++
Sbjct: 190 PYDYKADVWSLGITLIEM 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 480 NEVSLTARLQHVNLLRVLGYCTERDENML--IYEYLPNKSLDLYLFDPIR-RYVLDWQKR 536
+EV+L L+H N++R +R L + EY L + + R LD +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 537 VNIIEGVTQGLLYLQEYSN--FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
+ ++ +T L S+ V+HRDLK +N+ LD + N K+ DFG+A++ D D A
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
VGT Y+ PE + + Y+ K D++S G LL ++ +
Sbjct: 174 K--EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 113/238 (47%), Gaps = 38/238 (15%)
Query: 412 AEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGN-LPRGQ---EFAVKRL 467
AE D P+ +V + SD +G+G FG VY G + + Q + A+K L
Sbjct: 9 AEVKDVLIPHERVVTHSD-----------RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL 57
Query: 468 S-ATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI 526
S T Q +E F E L L H N+L ++G ML E LP+ L +
Sbjct: 58 SRITEMQQVEAFLREGLLMRGLNHPNVLALIGI-------MLPPEGLPHVLLPYMCHGDL 110
Query: 527 RRYVLDWQKRVNIIE------GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISD 580
+++ Q+ + + V +G+ YL E + +HRDL A N +LD K++D
Sbjct: 111 LQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVAD 167
Query: 581 FGMAK--LFRK--DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
FG+A+ L R+ V + R+ + + E ++ ++ K DV+SFGVLL ++++
Sbjct: 168 FGLARDILDREYYSVQQHRHARLPVKWTAL--ESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF ++ + +E ++ S E+ E+S+ L H +++ G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR L + + + G YL RV
Sbjct: 83 FFEDNDFVFVVLELCRRRSL-LELHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+ +L KI DFG+A + + D + GT Y+ PE + K +S
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 194
Query: 619 KYDVYSFGVLLLQIISSK 636
+ DV+S G ++ ++ K
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
T+ + +LG+G F V + +P GQE+A K+LSA Q LE E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
L+H N++R+ +E + L+++ + L F+ I ++ + + Q L
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDI--VAREYYSEADASHCIQQIL 113
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
+ ++HRDLK N+LL ++ K++DFG+A + D +A G GT G
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFG-FAGTPG 171
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE ++K Y D+++ GV+L
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF ++ + +E ++ S E+ E+S+ L H +++ G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR L + + + G YL RV
Sbjct: 107 FFEDNDFVFVVLELCRRRSL-LELHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+ +L KI DFG+A + + D + GT Y+ PE + K +S
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 619 KYDVYSFGVLLLQIISSK 636
+ DV+S G ++ ++ K
Sbjct: 219 EVDVWSIGCIMYTLLVGK 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%), Gaps = 35/246 (14%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVN 492
+F LG GGFG V++ N +A+KR+ + + E+ EV A+L+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI----RRYVLDWQKRVNIIEGVTQGL- 547
++R E++ E L S +YL+ + + + DW IE + +
Sbjct: 65 IVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 548 --LYLQ-----EYSNFR-VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA----- 594
++LQ E+ + + ++HRDLK SNI + K+ DFG+ +D +E
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 595 ------NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII----SSKRNARYYGT 644
+TG+ VGT Y+ PE + YS K D++S G++L +++ + R
Sbjct: 181 MPAYARHTGQ-VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTD 239
Query: 645 SENLNF 650
NL F
Sbjct: 240 VRNLKF 245
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLG 498
LG+GGF ++ + +E ++ S E+ E+S+ L H +++ G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 499 YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
+ + D ++ E +SL L L RR L + + + G YL RV
Sbjct: 109 FFEDNDFVFVVLELCRRRSL-LELHK--RRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSM 618
IHRDLK N+ L+ +L KI DFG+A + + D + GT Y+ PE + K +S
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 619 KYDVYSFGVLLLQIISSK 636
+ DV+S G ++ ++ K
Sbjct: 221 EVDVWSIGCIMYTLLVGK 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNL--PRGQE----FAVKRLSA-TSTQGLEEFKNEVSLTAR 487
N LGEG FG V K +G+ AVK L S L + +E ++ +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL---------------------FDPI 526
+ H +++++ G C++ +LI EY SL +L D
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
L ++ ++QG+ YL E +++HRDL A NIL+ KISDFG++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLS-- 197
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIIS 634
+DV E ++ + + G +P +++ IY+ + DV+SFGVLL +I++
Sbjct: 198 --RDVYEEDS-YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSATSTQGLEEFKNEVSLTAR 487
T+ + +LG+G F V + +P GQE+A K+LSA Q LE E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
L+H N++R+ +E + L+++ + L F+ I ++ + + Q L
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDI--VAREYYSEADASHCIQQIL 113
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
+ ++HRDLK N+LL ++ K++DFG+A + D +A G GT G
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFG-FAGTPG 171
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE ++K Y D+++ GV+L
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 446 GGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLG---YCTE 502
G FG V+K L + AVK Q + + EV ++H N+L+ +G T
Sbjct: 35 GRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTS 92
Query: 503 RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-------YSN 555
D ++ + K L D ++ V+ W + +I E + +GL YL E
Sbjct: 93 VDVDLWLITAFHEKG---SLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 556 FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI 615
+ HRD+K+ N+LL N L I+DFG+A F +T VGT Y+ PE ++ I
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAI 209
Query: 616 -----YSMKYDVYSFGVLLLQIIS 634
++ D+Y+ G++L ++ S
Sbjct: 210 NFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 22/223 (9%)
Query: 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHV 491
NF K+G G F VY+ L G A+K++ + + E+ L +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT------Q 545
N+++ Y + ++N L N L+L + R + ++K+ +I T Q
Sbjct: 93 NVIKY--YASFIEDNEL------NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L+ + RV+HRD+K +N+ + K+ D G+ + F A++ +VGT Y
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYY 202
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648
+ PE + + Y+ K D++S G LL ++ + + + +YG NL
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFYGDKMNL 243
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 130
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVP 607
L+ R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 186
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Query: 480 NEVSLTARLQHVNLLRVLGYCTERDENML--IYEYLPNKSLDLYLFDPIR-RYVLDWQKR 536
+EV+L L+H N++R +R L + EY L + + R LD +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 537 VNIIEGVTQGLLYLQEYSN--FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
+ ++ +T L S+ V+HRDLK +N+ LD + N K+ DFG+A++ D A
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
VGT Y+ PE + + Y+ K D++S G LL ++ +
Sbjct: 174 KA--FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 37/229 (16%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN 492
++F LG+G FG V K N + +A+K++ T + L +EV L A L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVXLLASLNHQY 63
Query: 493 LLRVLGYCTER------------DENMLI-YEYLPNKSLDLYLFDPIRRYVLDWQKRV-- 537
++R ER + I EY N++L +D I L+ Q+
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLIHSENLNQQRDEYW 119
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD----- 592
+ + + L Y+ +IHR+LK NI +D N KI DFG+AK + +D
Sbjct: 120 RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 593 -------EANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQII 633
N +GT YV E + G Y+ K D YS G++ + I
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 434 TNNFSSANKLGEGGFGPV--YKGNLPRGQEFAVKRLSATSTQ---GLEEFKNEVSLTARL 488
++ + LG+G FG V K + GQE AVK +S + E EV L +L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGL 547
H N+ ++ + ++ L+ E L FD I R II V G+
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 548 LYLQEYSNFRVIHRDLKASNILLDN---ELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Y + +++HRDLK N+LL++ + N +I DFG++ F + +GT
Sbjct: 140 TYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGTAY 193
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
Y+ PE V G Y K DV+S GV+L ++S
Sbjct: 194 YIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 130
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVP 607
L+ + R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 131 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 186
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 136
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA--NTGRIVGTYGYVP 607
L+ + R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCA 192
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 31/223 (13%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGL--EEFKNEVSLTARLQHVNLLRV 496
+G+G F V + N GQ+FAVK + TS+ GL E+ K E S+ L+H +++ +
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLYLQE 552
L + +++E++ L F+ ++R +V + + + + L Y +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 553 YSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGRI----VGTYGY 605
+ +IHRD+K +LL +N K+ FG+A + +G + VGT +
Sbjct: 149 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA------IQLGESGLVAGGRVGTPHF 199
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648
+ PE VK+ Y DV+ GV+L ++S +YGT E L
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERL 240
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 126
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA--NTGRIVGTYGYVP 607
L+ R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV-PFAWCA 182
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 97/218 (44%), Gaps = 37/218 (16%)
Query: 441 NKLGEGGFGPVYKG-NLPRGQEFAVKRL-SATSTQGLEEFKNEVSLTARLQHVNLLRV-- 496
+LG GGFG V + + G++ A+K+ S + E + E+ + +L H N++
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 497 ----LGYCTERDENMLIYEYLPNKSLDLYL--FD--------PIRRYVLDWQKRVNIIEG 542
L D +L EY L YL F+ PIR + D
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD---------- 129
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLD---NELNPKISDFGMAKLFRKDVDEANTGRI 599
++ L YL E R+IHRDLK NI+L L KI D G AK D E T
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCT-EF 183
Query: 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKR 637
VGT Y+ PE +++ Y++ D +SFG L + I+ R
Sbjct: 184 VGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 24/228 (10%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLEEF-----KNEVSLTA 486
AT+ + ++G G +G VYK P F A+K + + G EV+L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 487 RLQ---HVNLLRVLGYC----TERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN 538
RL+ H N++R++ C T+R+ + L++E++ ++ L YL D L + +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598
++ +GL +L ++N ++HRDLK NIL+ + K++DFG+A+++ +
Sbjct: 125 LMRQFLRGLDFL--HANC-IVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTP 178
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+V T Y PE + + Y+ D++S G + ++ +R + G SE
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSE 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 417 SDTP--NLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ 473
SD+P +L S ++ F +G G +G VYKG ++ GQ A+K + T +
Sbjct: 4 SDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE 63
Query: 474 GLEEFKNEVSLTARL-QHVNLLRVLGYCTER------DENMLIYEYLPNKSLDLYLFDPI 526
EE K E+++ + H N+ G ++ D+ L+ E+ S+ L
Sbjct: 64 E-EEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNT 121
Query: 527 RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586
+ L + I + +GL +L ++ +VIHRD+K N+LL K+ DFG++
Sbjct: 122 KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYV-----KKGIYSMKYDVYSFGVLLLQI 632
+ V NT +GT ++ PE + Y K D++S G+ +++
Sbjct: 179 LDRTVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 227
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 31/223 (13%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGL--EEFKNEVSLTARLQHVNLLRV 496
+G+G F V + N GQ+FAVK + TS+ GL E+ K E S+ L+H +++ +
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLYLQE 552
L + +++E++ L F+ ++R +V + + + + L Y +
Sbjct: 94 LETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 553 YSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGRI----VGTYGY 605
+ +IHRD+K +LL +N K+ FG+A + +G + VGT +
Sbjct: 151 NN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA------IQLGESGLVAGGRVGTPHF 201
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648
+ PE VK+ Y DV+ GV+L ++S +YGT E L
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGTKERL 242
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 136
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVP 607
L+ + R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 137 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 192
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 39/219 (17%)
Query: 441 NKLGEGGFGPVYKG-NLPRGQEFAVKRL-SATSTQGLEEFKNEVSLTARLQHVNLLRV-- 496
+LG GGFG V + + G++ A+K+ S + E + E+ + +L H N++
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 497 ----LGYCTERDENMLIYEYLPNKSLDLYL--FD--------PIRRYVLDWQKRVNIIEG 542
L D +L EY L YL F+ PIR + D
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD---------- 130
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLD---NELNPKISDFGMAKLFRKDVDEAN-TGR 598
++ L YL E R+IHRDLK NI+L L KI D G AK ++D+
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTE 183
Query: 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKR 637
VGT Y+ PE +++ Y++ D +SFG L + I+ R
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 23/196 (11%)
Query: 443 LGEGGFGPV-----YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVL 497
LGEG FG V YK +F ++L S + + E+S L+H +++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VEREISYLKLLRHPHIIKLY 75
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT--QGLLYLQEYSN 555
T + +++ EY + LFD Y+++ +KR+ EG Q ++ EY +
Sbjct: 76 DVITTPTDIVMVIEYAGGE-----LFD----YIVE-KKRMTEDEGRRFFQQIICAIEYCH 125
Query: 556 -FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+++HRDLK N+LLD+ LN KI+DFG++ + D G+ Y PE +
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM---TDGNFLKTSCGSPNYAAPEVINGK 182
Query: 615 IYS-MKYDVYSFGVLL 629
+Y+ + DV+S G++L
Sbjct: 183 LYAGPEVDVWSCGIVL 198
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 126
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVP 607
L+ + R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 182
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 441 NKLGEGGFGPVYKG--NLPRGQ--EFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNL 493
KLG+G FG V +G + P G+ AVK L + + +++F EV+ L H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR----YVLDWQKRVNIIEGVTQGLLY 549
+R+ G M + E P SL D +R+ ++L R + V +G+ Y
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSL----LDRLRKHQGHFLLGTLSRYAV--QVAEGMGY 126
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE--ANTGRIVGTYGYVP 607
L+ + R IHRDL A N+LL KI DFG+ + ++ D R V + +
Sbjct: 127 LE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV-PFAWCA 182
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE +K +S D + FGV L ++ +
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ +L ++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 152
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ D + TG + ++ E ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 211
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 107/205 (52%), Gaps = 23/205 (11%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYL----FDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
G C + + +++ Y+ + L ++ +P + ++ + +V +G+ +L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 208
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPE 609
++ + +HRDL A N +LD + K++DFG+A+ ++ K+ D + TG + ++ E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL-PVKWMALE 266
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIIS 634
++ ++ K DV+SFGVLL ++++
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ +L ++
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 157
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ D + TG + ++ E ++
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 216
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 217 QKFTTKSDVWSFGVLLWELMT 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ +L ++
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 150
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ D + TG + ++ E ++
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 209
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 210 QKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ +L ++
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 153
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ D + TG + ++ E ++
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 212
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ +L ++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 152
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ D + TG + ++ E ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV-KWMALESLQT 211
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 36/228 (15%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A +D+
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA----RDI 207
Query: 592 DEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + + T G +P PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 208 NNIDXXKKT-TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 36/228 (15%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYL-------------FDPIRRYVL 531
+ +H N++ +LG CT+ +I EY +L YL + + +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 532 DWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A +D+
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA----RDI 207
Query: 592 DEANTGRIVGTYGYVP-----PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + + T G +P PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 208 NNIDXXKKT-TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 491 VNLLRVLGYCTERDENMLI-YEYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEGVTQGLL 548
++ L +C + DE + Y N L Y IR+ D + L
Sbjct: 97 PFFVK-LYFCFQDDEKLYFGLSYAKNGELLKY----IRKIGSFDETCTRFYTAEIVSALE 151
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VGT YV P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + + D+++ G ++ Q+++
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 457 PRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515
P+ ++ A+KR++ Q ++E E+ ++ H N++ +DE L+ + L
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 516 KSLDLYLFDPIRRYV---------LDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKAS 566
S+ D I+ V LD I+ V +GL YL + IHRD+KA
Sbjct: 93 GSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAG 145
Query: 567 NILLDNELNPKISDFGMAKLFRKDVD-EANTGR--IVGTYGYVPPEYVK--KGIYSMKYD 621
NILL + + +I+DFG++ D N R VGT ++ PE ++ +G Y K D
Sbjct: 146 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKAD 204
Query: 622 VYSFGVLLLQI 632
++SFG+ +++
Sbjct: 205 IWSFGITAIEL 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 115/254 (45%), Gaps = 36/254 (14%)
Query: 403 RTPGTSTPAAEYFD----SDTPNLQVFSFSDIKAATNNFS-------SANKLGEGGFGPV 451
R PG P E F+ S TP + S + I NF +LG G +G V
Sbjct: 9 RNPGLKIPK-EAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVV 67
Query: 452 YK-GNLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509
K ++P GQ AVKR+ AT ++Q + ++ ++ R R+ ++ I
Sbjct: 68 EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127
Query: 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRV------NIIEGVTQGLLYLQEYSNFRVIHRDL 563
L + SLD + + V+D + + I + + L +L +S VIHRD+
Sbjct: 128 CMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAVSIVKALEHL--HSKLSVIHRDV 180
Query: 564 KASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-----KKGIYSM 618
K SN+L++ K+ DFG++ VD G Y+ PE + +KG YS+
Sbjct: 181 KPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPELNQKG-YSV 236
Query: 619 KYDVYSFGVLLLQI 632
K D++S G+ ++++
Sbjct: 237 KSDIWSLGITMIEL 250
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 14/211 (6%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLE---EFKNEVSL 484
D + ++ + LG G FG V G G + AVK L+ + L+ + + E+
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQN 69
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
+H +++++ + + ++ EY+ L Y+ R LD ++ + + +
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQIL 126
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
G+ Y + V+HRDLK N+LLD +N KI+DFG++ + D G+
Sbjct: 127 SGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRXSCGSPN 180
Query: 605 YVPPEYVKKGIYS-MKYDVYSFGVLLLQIIS 634
Y PE + +Y+ + D++S GV+L ++
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 147 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 202
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 203 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 144 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 199
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 200 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 457 PRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515
P+ ++ A+KR++ Q ++E E+ ++ H N++ +DE L+ + L
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 516 KSLDLYLFDPIRRYV---------LDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKAS 566
S+ D I+ V LD I+ V +GL YL + IHRD+KA
Sbjct: 98 GSV----LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAG 150
Query: 567 NILLDNELNPKISDFGMAKLFRKDVD-EANTGR--IVGTYGYVPPEYVK--KGIYSMKYD 621
NILL + + +I+DFG++ D N R VGT ++ PE ++ +G Y K D
Sbjct: 151 NILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKAD 209
Query: 622 VYSFGVLLLQI 632
++SFG+ +++
Sbjct: 210 IWSFGITAIEL 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEGVTQGL 547
+++ Y T +D+ L + Y N L Y IR+ D + L
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGCLLKY----IRKIGSFDETCTRFYTAEIVSAL 145
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VGT YV
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + + S D+++ G ++ Q+++
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 416 DSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFA-----VKRLSA 469
D T NL + T+++ +LG+G F V + QE+A K+LSA
Sbjct: 12 DLGTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA 71
Query: 470 TSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRY 529
Q LE E + L+H N++R+ +E + L+++ + L D + R
Sbjct: 72 RDHQKLE---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVARE 125
Query: 530 VLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKL 586
+ I + + + ++ ++ ++HRDLK N+LL ++ K++DFG+A
Sbjct: 126 YYSEADASHCIHQILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIE 182
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLL 629
+ + +A G GT GY+ PE ++K Y D+++ GV+L
Sbjct: 183 VQGE-QQAWFG-FAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 256
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 257 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 434 TNNFSSANKLGEGGFGPVY--KGNLPRGQEFAVK---RLSATSTQGLEEFKNEVSLTARL 488
++ + KLG G +G V K L G E A+K + S T+T +EV++ +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGL 547
H N++++ + ++ L+ E LFD I R I++ V G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAVIMKQVLSGT 117
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVGTYG 604
YL +++ ++HRDLK N+LL+++ KI DFG++ F +V R+ GT
Sbjct: 118 TYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERL-GTAY 171
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLL 629
Y+ PE ++K Y K DV+S GV+L
Sbjct: 172 YIAPEVLRKK-YDEKCDVWSCGVIL 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ +L ++
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL---ASK 153
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ + K+ D + TG + ++ E ++
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL-PVKWMALESLQT 212
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 213 QKFTTKSDVWSFGVLLWELMT 233
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+L L+ N V++RDLK +NILLD + +ISD G+A F K A+ VGT+GY+
Sbjct: 301 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 356
Query: 607 PPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
PE ++KG+ Y D +S G +L +++ R + T +
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 431 KAATNNFSSANKLGEGGFGPVY--KGNLPRGQEFAVK---RLSATSTQGLEEFKNEVSLT 485
+ ++ + KLG G +G V K L G E A+K + S T+T +EV++
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 486 ARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVT 544
+L H N++++ + ++ L+ E LFD I R I++ V
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGE----LFDEIILRQKFSEVDAAVIMKQVL 131
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGRIVG 601
G YL +++ ++HRDLK N+LL+++ KI DFG++ F +V R+ G
Sbjct: 132 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERL-G 185
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLL 629
T Y+ PE ++K Y K DV+S GV+L
Sbjct: 186 TAYYIAPEVLRKK-YDEKCDVWSCGVIL 212
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+L L+ N V++RDLK +NILLD + +ISD G+A F K A+ VGT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 607 PPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
PE ++KG+ Y D +S G +L +++ R + T +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKNTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 142 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI-NNI 197
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 198 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
pdb|1WNO|B Chain B, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
Length = 395
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 54/275 (19%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSA----NQQY----FSIFANSV---- 83
GR D+ TH++ AFA V T ++ ++ + + Y +S N+V
Sbjct: 18 GRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCI 77
Query: 84 ------RRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIR 137
+++N ++K LLSI G +P+ + D+ RK+F +++++
Sbjct: 78 KQLYLLKKQNRNLKVLLSI------------GGWTYSPNFAPAASTDAG-RKNFAKTAVK 124
Query: 138 TARLYGFQGIDLFWLWP-NSTDLNSLGIL-------LDEWKASASDQPELTLSMAVRYSP 189
+ GF G+D+ W +P N N +L LD + A+ + L++A P
Sbjct: 125 LLQDLGFDGLDIDWEYPENDQQANDFVLLLREVRTALDSYSAANAGGQHFLLTVASPAGP 184
Query: 190 THETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSN-ISTDFGIREWLR 248
V + + M + L++ +L+AYDY S +++G A +YN +SN +ST F + L
Sbjct: 185 DKIKVLH-LKDMDQQLDFWNLMAYDY-AGSFSSLSGHQANVYNDTSNPLSTPFNTQTALD 242
Query: 249 ----RGFPANKLVLG--------ARASGPGITIDG 271
G PANK+VLG A GPG +G
Sbjct: 243 LYRAGGVPANKIVLGMPLYGRSFANTDGPGKPYNG 277
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+L L+ N V++RDLK +NILLD + +ISD G+A F K A+ VGT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 607 PPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
PE ++KG+ Y D +S G +L +++ R + T +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+L L+ N V++RDLK +NILLD + +ISD G+A F K A+ VGT+GY+
Sbjct: 302 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTHGYM 357
Query: 607 PPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
PE ++KG+ Y D +S G +L +++ R + T +
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I EY +L YL P Y D
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ +I+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9P|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9U|A Chain A, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9U|B Chain B, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9V|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|1W9V|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|2A3A|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3A|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3B|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3B|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3C|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3C|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3E|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2A3E|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2IUZ|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|2IUZ|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|3CH9|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CH9|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CHC|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHC|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHD|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHD|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
pdb|3CHF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
Length = 433
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 54/275 (19%)
Query: 36 GREFPLSDINSALFTHLICAFAEVDSSTYQLSISSA----NQQY----FSIFANSV---- 83
GR D+ TH++ AFA V T ++ ++ + + Y +S N+V
Sbjct: 56 GRNHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCI 115
Query: 84 ------RRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIR 137
+++N ++K LLSI G +P+ + D+ RK+F +++++
Sbjct: 116 KQLYLLKKQNRNLKVLLSI------------GGWTYSPNFAPAASTDAG-RKNFAKTAVK 162
Query: 138 TARLYGFQGIDLFWLWP-NSTDLNSLGIL-------LDEWKASASDQPELTLSMAVRYSP 189
+ GF G+D+ W +P N N +L LD + A+ + L++A P
Sbjct: 163 LLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVASPAGP 222
Query: 190 THETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSN-ISTDFGIREWLR 248
V + + M + L++ +L+AYDY S +++G A +YN +SN +ST F + L
Sbjct: 223 DKIKVLH-LKDMDQQLDFWNLMAYDY-AGSFSSLSGHQANVYNDTSNPLSTPFNTQTALD 280
Query: 249 ----RGFPANKLVLG--------ARASGPGITIDG 271
G PANK+VLG A GPG +G
Sbjct: 281 LYRAGGVPANKIVLGMPLYGRSFANTDGPGKPYNG 315
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ--GLEEFKNEVSL 484
SD + N+ +G+G F V ++ G+E A+K + T L++ EV +
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ LI EY + YL R + + + I
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 124
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q Y + R++HRDLKA N+LLD ++N KI+DFG + +E G + T+
Sbjct: 125 Q---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTVGGKLDTFC 171
Query: 605 YVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
PP + KY DV+S GV+L ++S
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 151
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ + TG + ++ E ++
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPV-KWMALESLQT 210
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTA 486
K +F LGEG F V L +E+A+K L + E + +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 487 RLQHVNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRV 537
RL H +++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 63 RLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE----- 115
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A
Sbjct: 116 -----IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
VGT YV PE + + D+++ G ++ Q+++
Sbjct: 168 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTA 486
K +F LGEG F V L +E+A+K L + E + +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 487 RLQHVNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRV 537
RL H +++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 64 RLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE----- 116
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A
Sbjct: 117 -----IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
VGT YV PE + + D+++ G ++ Q+++
Sbjct: 169 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKN 480
+ S +D + N+ +G+G F V ++ G+E AVK + T + L++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR 63
Query: 481 EVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
EV + L H N++++ L+ EY + YL R + + + R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFR 121
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ V+ Q+Y ++HRDLKA N+LLD ++N KI+DFG + +E G +
Sbjct: 122 QIVSAVQYCHQKY----IVHRDLKAENLLLDGDMNIKIADFGFS-------NEFTVGNKL 170
Query: 601 GTYGYVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
T+ PP + KY DV+S GV+L ++S
Sbjct: 171 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTA 486
K +F LGEG F V L +E+A+K L + E + +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 487 RLQHVNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRV 537
RL H +++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 65 RLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE----- 117
Query: 538 NIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A
Sbjct: 118 -----IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
VGT YV PE + + D+++ G ++ Q+++
Sbjct: 170 XFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTA 486
K +F LGEG F V L +E+A+K L + E + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 487 RLQHVNLLRVLGYCTERDENMLIY--EYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEGV 543
RL H +++ Y T +D+ L + Y N L Y IR+ D +
Sbjct: 66 RLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKY----IRKIGSFDETCTRFYTAEI 119
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VGT
Sbjct: 120 VSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
YV PE + + D+++ G ++ Q+++
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 13/215 (6%)
Query: 424 VFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ--GLEEFKN 480
+ S +D + N+ +G+G F V ++ G+E A+K + T L++
Sbjct: 4 IASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR 63
Query: 481 EVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNII 540
EV + L H N++++ LI EY + YL R + + + I
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
Q Y + R++HRDLKA N+LLD ++N KI+DFG + F
Sbjct: 124 VSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDAFC 174
Query: 601 GTYGYVPPEYVKKGIYS-MKYDVYSFGVLLLQIIS 634
G Y PE + Y + DV+S GV+L ++S
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 20/218 (9%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLE---EFKNE 481
S D + ++ + LG G FG V G G + AVK L+ + L+ + K E
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 482 VSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
+ +H +++++ + + ++ EY+ L FD I ++ RV +E
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL----FDYICKH-----GRVEEME 112
Query: 542 G--VTQGLLYLQEYSN-FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598
+ Q +L +Y + V+HRDLK N+LLD +N KI+DFG++ + D + T
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS- 170
Query: 599 IVGTYGYVPPEYVKKGIYS-MKYDVYSFGVLLLQIISS 635
G+ Y PE + +Y+ + D++S GV+L ++
Sbjct: 171 -CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 140
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 141 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 138
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 139 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYLFDPIRRY-VLDWQKRVNIIEGVTQGL 547
+++ Y T +D+ L + Y N L Y IR+ D + L
Sbjct: 95 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKY----IRKIGSFDETCTRFYTAEIVSAL 148
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VGT YV
Sbjct: 149 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + + D+++ G ++ Q+++
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 140
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 141 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 138
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 139 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 74 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 122
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 123 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 138
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 139 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 141
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 142 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 430 IKAATNNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTAR 487
++ ++ +LG G +G V K ++P GQ AVKR+ AT ++Q + ++ ++ R
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV------NIIE 541
R+ ++ I L + SLD + + V+D + + I
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELMDTSLDKFY-----KQVIDKGQTIPEDILGKIAV 116
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ + L +L +S VIHRD+K SN+L++ K+ DFG++ VD+ G
Sbjct: 117 SIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDIDAG 171
Query: 602 TYGYVPPEYV-----KKGIYSMKYDVYSFGVLLLQI 632
Y+ PE + +KG YS+K D++S G+ ++++
Sbjct: 172 CKPYMAPERINPELNQKG-YSVKSDIWSLGITMIEL 206
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 140
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 141 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 93 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 141
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 142 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 140
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 141 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 137
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 138 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 437 FSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEE-FKNEVSLTARLQHVNLL 494
F LG G F V G+ FAVK + + +G E +NE+++ +++H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-IIEGVTQGLLYLQEY 553
+ + L+ + + L FD I +K + +I V + YL
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 554 SNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEY 610
++HRDLK N+L D E ISDFG++K+ K D +T GT GYV PE
Sbjct: 140 G---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG-DVMSTA--CGTPGYVAPEV 193
Query: 611 VKKGIYSMKYDVYSFGVL 628
+ + YS D +S GV+
Sbjct: 194 LAQKPYSKAVDCWSIGVI 211
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 89 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 137
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 138 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGP-VYKGNLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 90 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 138
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 139 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLE---EFKNE 481
S D + ++ + LG G FG V G G + AVK L+ + L+ + K E
Sbjct: 2 SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61
Query: 482 VSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
+ +H +++++ + + ++ EY+ L FD I ++ RV +E
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGEL----FDYICKH-----GRVEEME 112
Query: 542 G--VTQGLLYLQEYSN-FRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598
+ Q +L +Y + V+HRDLK N+LLD +N KI+DFG++ + D
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRD 169
Query: 599 IVGTYGYVPPEYVKKGIYS-MKYDVYSFGVLLLQIISS 635
G+ Y PE + +Y+ + D++S GV+L ++
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 28/213 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQH 490
+F LGEG F V L +E+A+K L + E + +RL H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 491 VNLLRVLGYCTERDENMLIY--EYLPNKSLDLYL-----FDPI--RRYVLDWQKRVNIIE 541
+++ Y T +D+ L + Y N L Y+ FD R Y +
Sbjct: 92 PFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------- 140
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+ L YL +IHRDLK NILL+ +++ +I+DFG AK+ + +A VG
Sbjct: 141 -IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T YV PE + + D+++ G ++ Q+++
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I Y +L YL P Y D
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL------ 488
N S LG G FG V + + + + A T ++ K LT R
Sbjct: 23 NRLSFGKTLGAGAFGKVVEAT-----AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 77
Query: 489 -------QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
H+N++ +LG CT ++I EY DL F +R K I
Sbjct: 78 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIM 135
Query: 542 G-----------------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584
V +G+ +L ++ IHRDL A NILL + KI DFG+A
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA 192
Query: 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + D + G ++ PE + +Y+ + DV+S+G+ L ++ S
Sbjct: 193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 170
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKD---VDEANTGRIVGTYGYVPPEYVK 612
+ +HRDL A N +LD + K++DFG+A+ ++ K+ V ++ ++ E ++
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQ 228
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMT 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL------ 488
N S LG G FG V + + + + A T ++ K LT R
Sbjct: 46 NRLSFGKTLGAGAFGKVVEAT-----AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 489 -------QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
H+N++ +LG CT ++I EY DL F +R K I
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIM 158
Query: 542 G-----------------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584
V +G+ +L ++ IHRDL A NILL + KI DFG+A
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA 215
Query: 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + D + G ++ PE + +Y+ + DV+S+G+ L ++ S
Sbjct: 216 RHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 17/212 (8%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARL- 488
+ +NF LG+G FG V + G +AVK L L++ E ++T +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI--LQDDDVECTMTEKRI 76
Query: 489 -----QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
H L ++ D + E++ L ++ RR+ D + +
Sbjct: 77 LSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL-MFHIQKSRRF--DEARARFYAAEI 133
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
L++L + +I+RDLK N+LLD+E + K++DFGM K + T GT
Sbjct: 134 ISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTP 188
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIISS 635
Y+ PE +++ +Y D ++ GVLL +++
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 152
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKD---VDEANTGRIVGTYGYVPPEYVK 612
+ +HRDL A N +LD + K++DFG+A+ ++ K+ V ++ ++ E ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQ 210
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 431 KAATNNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLS---ATSTQGLEEFKNEVSLTA 486
K + +F LG G FG V+ + G+ +A+K L + +E +E + +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 487 RLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG--VT 544
+ H ++R+ G + + +I +Y+ L F +R+ Q+ N +
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL----FSLLRKS----QRFPNPVAKFYAA 113
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
+ L L+ + +I+RDLK NILLD + KI+DFG AK + DV T + GT
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK-YVPDV----TYXLCGTPD 168
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
Y+ PE V Y+ D +SFG+L+ ++++
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V +G+ +L ++ + IHRDL A NILL + KI DFG+A+ KD D G
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + +Y+++ DV+SFGVLL +I S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 171
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKD---VDEANTGRIVGTYGYVPPEYVK 612
+ +HRDL A N +LD + K++DFG+A+ ++ K+ V ++ ++ E ++
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQ 229
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMT 251
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 151
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ + TG + ++ E ++
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQT 210
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 211 QKFTTKSDVWSFGVLLWELMT 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 150
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKD---VDEANTGRIVGTYGYVPPEYVK 612
+ +HRDL A N +LD + K++DFG+A+ ++ K+ V ++ ++ E ++
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQ 208
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 147
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ + TG + ++ E ++
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQT 206
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 207 QKFTTKSDVWSFGVLLWELMT 227
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 144
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKD---VDEANTGRIVGTYGYVPPEYVK 612
+ +HRDL A N +LD + K++DFG+A+ ++ K+ V ++ ++ E ++
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQ 202
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMT 224
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 18/212 (8%)
Query: 431 KAATNNFSSANKLGEGGFGPVY---KGNLP-RGQEFAVKRLSATSTQGLEEF--KNEVSL 484
KA ++F LG+G FG V+ K P G +A+K L + + + K E +
Sbjct: 24 KADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI 83
Query: 485 TARLQHVNLLRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
A + H +++ L Y + + + LI ++L L F + + V+ ++ V +
Sbjct: 84 LADVNHPFVVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--L 136
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD-EANTGRIVGT 602
+ L L + +I+RDLK NILLD E + K++DFG++K + +D E GT
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGT 193
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
Y+ PE V + +S D +S+GVL+ ++++
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL------ 488
N S LG G FG V + + + + A T ++ K LT R
Sbjct: 39 NRLSFGKTLGAGAFGKVVEAT-----AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 93
Query: 489 -------QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
H+N++ +LG CT ++I EY DL F +R K I
Sbjct: 94 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIM 151
Query: 542 G-----------------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584
V +G+ +L ++ IHRDL A NILL + KI DFG+A
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA 208
Query: 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + D + G ++ PE + +Y+ + DV+S+G+ L ++ S
Sbjct: 209 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 152
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKDVDEAN--TGRIVGTYGYVPPEYVKK 613
+ +HRDL A N +LD + K++DFG+A+ ++ K+ + TG + ++ E ++
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV-KWMALESLQT 211
Query: 614 GIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 212 QKFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 443 LGEGGFGPVYKGNL----PRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVL 497
+G G FG VY G L + AVK L+ + G + +F E + H N+L +L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 498 GYCTERDEN-MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556
G C + + +++ Y+ + L ++ + + + + V +G+ YL ++
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL---ASK 149
Query: 557 RVIHRDLKASNILLDNELNPKISDFGMAK-LFRKD---VDEANTGRIVGTYGYVPPEYVK 612
+ +HRDL A N +LD + K++DFG+A+ ++ K+ V ++ ++ E ++
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL--PVKWMALESLQ 207
Query: 613 KGIYSMKYDVYSFGVLLLQIIS 634
++ K DV+SFGVLL ++++
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMT 229
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 435 NNFSSANKLGEGGFGPVY--------KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLT 485
+ + LGEG FG V K AVK L +T+ L + +E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 486 ARL-QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF---DPIRRYVLD--------- 532
+ +H N++ +LG CT+ +I Y +L YL P Y D
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 533 -WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
++ V+ + +G+ YL ++ + IHRDL A N+L+ KI+DFG+A+ ++
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 592 D---EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
D + GR+ ++ PE + +Y+ + DV+SFGVL+ +I +
Sbjct: 211 DYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHV 491
+ ++G G +G V K + P GQ AVKR+ +T + K + L L V
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDE-----KEQKQLLMDLDVV 74
Query: 492 NLLRVLGYCTE------RDENMLIYEYLPNKSLDLY-------LFDPIRRYVLDWQKRVN 538
Y + R+ + I L + S D + L D I +L
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG-----K 129
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598
I + L +L+E N ++IHRD+K SNILLD N K+ DFG++ VD R
Sbjct: 130 ITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL---VDSIAKTR 184
Query: 599 IVGTYGYVPPEYV-----KKGIYSMKYDVYSFGVLLLQIISSK 636
G Y+ PE + ++G Y ++ DV+S G+ L ++ + +
Sbjct: 185 DAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYELATGR 226
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL------ 488
N S LG G FG V + + + + A T ++ K LT R
Sbjct: 41 NRLSFGKTLGAGAFGKVVEAT-----AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 95
Query: 489 -------QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
H+N++ +LG CT ++I EY DL F +R K I
Sbjct: 96 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIM 153
Query: 542 G-----------------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584
V +G+ +L ++ IHRDL A NILL + KI DFG+A
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA 210
Query: 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + D + G ++ PE + +Y+ + DV+S+G+ L ++ S
Sbjct: 211 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 25/220 (11%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
+ ++G+G +G V+ G RG++ AVK T + E+ T ++H
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFR-ETEIYQTVLMRH 90
Query: 491 VNLLRVLGYCTERD----ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
N+L + + + LI +Y N SL +D ++ LD + + + G
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSMLKLAYSSVSG 146
Query: 547 LLYLQE-----YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT--GRI 599
L +L + HRDLK+ NIL+ I+D G+A F D +E +
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 600 VGTYGYVPPEYVKKGI-------YSMKYDVYSFGVLLLQI 632
VGT Y+PPE + + + Y M D+YSFG++L ++
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMA-DMYSFGLILWEV 245
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 18/192 (9%)
Query: 443 LGEGGFGPVY--KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
LG G F V+ K L G+ FA+K + + +NE+++ +++H N++ +
Sbjct: 17 LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
L+ + + L FD I R V + +I+ V + YL E ++
Sbjct: 76 ESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 560 HRDLKASNIL-LDNELNPKI--SDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIY 616
HRDLK N+L L E N KI +DFG++K+ + + GT GYV PE + + Y
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI----MSTACGTPGYVAPEVLAQKPY 184
Query: 617 SMKYDVYSFGVL 628
S D +S GV+
Sbjct: 185 SKAVDCWSIGVI 196
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 93/230 (40%), Gaps = 40/230 (17%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL------ 488
N S LG G FG V + + + + A T ++ K LT R
Sbjct: 46 NRLSFGKTLGAGAFGKVVEAT-----AYGLIKSDAAMTVAVKMLKPSAHLTEREALMSEL 100
Query: 489 -------QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
H+N++ +LG CT ++I EY DL F +R K I
Sbjct: 101 KVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG--DLLNFLRRKRDSFICSKTSPAIM 158
Query: 542 G-----------------VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584
V +G+ +L ++ IHRDL A NILL + KI DFG+A
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLA 215
Query: 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+ + D + G ++ PE + +Y+ + DV+S+G+ L ++ S
Sbjct: 216 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
V +G+ +L S+ + IHRDL A NILL KI DFG+A+ K+ D G
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
++ PE + IYS K DV+S+GVLL +I S
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 13/101 (12%)
Query: 433 ATNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQGLEEFKNEVS--- 483
A LG G FG V + + P + AVK L +T E+K ++
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATAS--EYKALMTELK 82
Query: 484 -LTARLQHVNLLRVLGYCTERDEN-MLIYEYLPNKSLDLYL 522
LT H+N++ +LG CT++ M+I EY +L YL
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVN 492
N+ +G+G F V ++ G+E AVK + T ++ L++ EV + L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++++ L+ EY + YL W K Q + +Q
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLV------AHGWMKEKEARAKFRQIVSAVQY 121
Query: 553 YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK 612
++HRDLKA N+LLD ++N KI+DFG + +E G + T+ PP
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFCGSPPYAAP 174
Query: 613 KGIYSMKY-----DVYSFGVLLLQIIS 634
+ KY DV+S GV+L ++S
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVS 201
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 437 FSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLL 494
F KLG G FG V+ G E +K ++ +Q +E+ + E+ + L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY----- 549
++ + ++ E L + R V + + EG L+
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGEL-------LERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L + + V+H+DLK NIL + +P KI DFG+A+LF+ D N GT Y
Sbjct: 137 LAYFHSQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNAA---GTALY 192
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLL 629
+ PE K+ + + K D++S GV++
Sbjct: 193 MAPEVFKRDV-TFKCDIWSAGVVM 215
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 112/236 (47%), Gaps = 23/236 (9%)
Query: 414 YFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATST 472
YF S P ++ ++ K + + +G G V + + G EFAVK + T+
Sbjct: 73 YFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAE 132
Query: 473 QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRR-YVL 531
+ E EV R + L +V G+ + + + + S +FD +R+ +
Sbjct: 133 RLSPEQLEEVREATRRETHILRQVAGH----PHIITLIDSYESSSFMFLVFDLMRKGELF 188
Query: 532 DW-QKRVNIIEGVTQGLLY-LQEYSNF----RVIHRDLKASNILLDNELNPKISDFGMAK 585
D+ ++V + E T+ ++ L E +F ++HRDLK NILLD+ + ++SDFG
Sbjct: 189 DYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG--- 245
Query: 586 LFRKDVDEANTGR-IVGTYGYVPPEYVKKGI------YSMKYDVYSFGVLLLQIIS 634
F ++ R + GT GY+ PE +K + Y + D+++ GV+L +++
Sbjct: 246 -FSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 405 PGTSTPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQE-FA 463
PGT++ +Y+ S+ A ++ F ++LG G VY+ Q+ +A
Sbjct: 32 PGTASLVPDYW---------IDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYA 82
Query: 464 VKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF 523
+K L T + + + E+ + RL H N++++ E L+ E + L F
Sbjct: 83 LKVLKKTVDKKI--VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----F 136
Query: 524 DPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN---ELNPKIS 579
D I + + + ++ + + + YL E ++HRDLK N+L + KI+
Sbjct: 137 DRIVEKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIA 193
Query: 580 DFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVL 628
DFG++K+ V + GT GY PE ++ Y + D++S G++
Sbjct: 194 DFGLSKIVEHQV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 431 KAATNNFSSANKLGEGGFGPVY-----KGNLPRGQEFAVKRLSATSTQGLEEF--KNEVS 483
KA + F LG+G FG V+ G+ R Q +A+K L + + + K E
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDAR-QLYAMKVLKKATLKVRDRVRTKMERD 79
Query: 484 LTARLQHVNLLRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ + H +++ L Y + + + LI ++L L F + + V+ ++ V
Sbjct: 80 ILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY-- 132
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD-EANTGRIVG 601
+ + L L + +I+RDLK NILLD E + K++DFG++K + +D E G
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCG 189
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T Y+ PE V + ++ D +SFGVL+ ++++
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 431 KAATNNFSSANKLGEGGFGPVY-----KGNLPRGQEFAVKRLSATSTQGLEEF--KNEVS 483
KA + F LG+G FG V+ G+ R Q +A+K L + + + K E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDAR-QLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 484 LTARLQHVNLLRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ + H +++ L Y + + + LI ++L L F + + V+ ++ V
Sbjct: 79 ILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY-- 131
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD-EANTGRIVG 601
+ + L L + +I+RDLK NILLD E + K++DFG++K + +D E G
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCG 188
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T Y+ PE V + ++ D +SFGVL+ ++++
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 20/213 (9%)
Query: 431 KAATNNFSSANKLGEGGFGPVY-----KGNLPRGQEFAVKRLSATSTQGLEEF--KNEVS 483
KA + F LG+G FG V+ G+ R Q +A+K L + + + K E
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDAR-QLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 484 LTARLQHVNLLRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
+ + H +++ L Y + + + LI ++L L F + + V+ ++ V
Sbjct: 79 ILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY-- 131
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD-EANTGRIVG 601
+ + L L + +I+RDLK NILLD E + K++DFG++K + +D E G
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCG 188
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
T Y+ PE V + ++ D +SFGVL+ ++++
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 19/218 (8%)
Query: 441 NKLGEGGFGPVYKG------NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
+KLGEG + VYKG NL +E ++ + EVSL L+H N++
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLKHANIV 63
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
+ L++EYL +K L YL D +++ + + +GL Y
Sbjct: 64 TLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQ- 119
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+V+HRDLK N+L++ K++DFG+A+ K + V T Y PP+ +
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGS 175
Query: 615 I-YSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFL 651
YS + D++ G + ++ + + E L+F+
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLRVLGYCT 501
+G+G FG V++G RG+E AVK S+ + F+ E+ T L+H N +LG+
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIA 65
Query: 502 ERDEN-------MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ--- 551
+++ L+ +Y + SL FD + RY + + + + GL +L
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 552 --EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYG 604
+ HRDLK+ NIL+ I+D G+A R D +D A R VGT
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR-VGTKR 178
Query: 605 YVPPEYVKKGIYSMKY-------DVYSFGVLLLQI 632
Y+ PE + I +MK+ D+Y+ G++ +I
Sbjct: 179 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 212
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPA 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLRVLGYCT 501
+G+G FG V++G RG+E AVK S+ + F+ E+ T L+H N +LG+
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIA 70
Query: 502 ERDEN-------MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ--- 551
+++ L+ +Y + SL FD + RY + + + + GL +L
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 552 --EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYG 604
+ HRDLK+ NIL+ I+D G+A R D +D A R VGT
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR-VGTKR 183
Query: 605 YVPPEYVKKGIYSMKY-------DVYSFGVLLLQI 632
Y+ PE + I +MK+ D+Y+ G++ +I
Sbjct: 184 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLRVLGYCT 501
+G+G FG V++G RG+E AVK S+ + F+ E+ T L+H N +LG+
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIA 64
Query: 502 ERDEN-------MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ--- 551
+++ L+ +Y + SL FD + RY + + + + GL +L
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 552 --EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYG 604
+ HRDLK+ NIL+ I+D G+A R D +D A R VGT
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR-VGTKR 177
Query: 605 YVPPEYVKKGIYSMKY-------DVYSFGVLLLQI 632
Y+ PE + I +MK+ D+Y+ G++ +I
Sbjct: 178 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 211
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLRVLGYCT 501
+G+G FG V++G RG+E AVK S+ + F+ E+ T L+H N +LG+
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIA 90
Query: 502 ERDEN-------MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ--- 551
+++ L+ +Y + SL FD + RY + + + + GL +L
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 552 --EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYG 604
+ HRDLK+ NIL+ I+D G+A R D +D A R VGT
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR-VGTKR 203
Query: 605 YVPPEYVKKGIYSMKY-------DVYSFGVLLLQI 632
Y+ PE + I +MK+ D+Y+ G++ +I
Sbjct: 204 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 237
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSL 484
+D + N+ +G+G F V ++ G+E AV+ + T ++ L++ EV +
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRI 66
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ L+ EY + YL R + + + R + V+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVS 124
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK--LFRKDVDEANTGRIVGT 602
Q++ ++HRDLKA N+LLD ++N KI+DFG + F +DE G+
Sbjct: 125 AVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE-----FCGS 175
Query: 603 YGYVPPEYVKKGIYS-MKYDVYSFGVLLLQIIS 634
Y PE + Y + DV+S GV+L ++S
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSL 484
+D + N+ +G+G F V ++ G+E AVK + T ++ L++ EV +
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ L+ EY + YL R + + + R + V+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVS 124
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q++ ++HRDLKA N+LLD ++N KI+DFG + +E G + T+
Sbjct: 125 AVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFC 173
Query: 605 YVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
PP + KY DV+S GV+L ++S
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLRVLGYCT 501
+G+G FG V++G RG+E AVK S+ + F+ E+ T L+H N +LG+
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIA 67
Query: 502 ERDEN-------MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ--- 551
+++ L+ +Y + SL FD + RY + + + + GL +L
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 552 --EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYG 604
+ HRDLK+ NIL+ I+D G+A R D +D A R VGT
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR-VGTKR 180
Query: 605 YVPPEYVKKGIYSMKY-------DVYSFGVLLLQI 632
Y+ PE + I +MK+ D+Y+ G++ +I
Sbjct: 181 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTA 486
++KA ++ +LG G +G V K ++P GQ AVKR+ AT ++Q + ++ ++
Sbjct: 30 EVKA--DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISX 87
Query: 487 RLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV------NII 540
R R+ ++ I L + SLD + + V+D + + I
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFY-----KQVIDKGQTIPEDILGKIA 142
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ + L +L +S VIHRD+K SN+L++ K DFG++ VD+
Sbjct: 143 VSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL---VDDVAKDIDA 197
Query: 601 GTYGYVPPEYV-----KKGIYSMKYDVYSFGVLLLQI 632
G Y PE + +KG YS+K D++S G+ +++
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIEL 233
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSL 484
+D + N+ +G+G F V ++ G+E AVK + T ++ L++ EV +
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ L+ EY + YL R + + + I
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 545 QGLLYLQEYSNFR-VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
Q Y + + ++HRDLKA N+LLD ++N KI+DFG + +E G + T+
Sbjct: 127 Q-------YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTF 172
Query: 604 GYVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
PP + KY DV+S GV+L ++S
Sbjct: 173 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
GL +LQ +I+RDLK N++LD+E + KI+DFGM K D T GT Y
Sbjct: 454 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 508
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNF 650
+ PE + Y D ++FGVLL ++++ + A + G E+ F
Sbjct: 509 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDEDELF 551
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 36/227 (15%)
Query: 437 FSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLS---ATSTQGLEEFKNEVSLTARLQH-- 490
+ KLG+G +G V+K R G+ AVK++ ST F+ + LT H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
VNLL VL +RD L+++Y+ DL+ IR +L+ + ++ + + + Y
Sbjct: 71 IVNLLNVLRADNDRDV-YLVFDYM---ETDLHAV--IRANILEPVHKQYVVYQLIKVIKY 124
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF---RK----------------D 590
L ++HRD+K SNILL+ E + K++DFG+++ F R+ D
Sbjct: 125 LHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
D+ V T Y PE + Y+ D++S G +L +I+ K
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L+E ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG+AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 39/215 (18%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLRVLGYCT 501
+G+G FG V++G RG+E AVK S+ + F+ E+ T L+H N +LG+
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHEN---ILGFIA 103
Query: 502 ERDEN-------MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ--- 551
+++ L+ +Y + SL FD + RY + + + + GL +L
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 552 --EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-----VDEANTGRIVGTYG 604
+ HRDLK+ NIL+ I+D G+A R D +D A R VGT
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHR-VGTKR 216
Query: 605 YVPPEYVKKGIYSMKY-------DVYSFGVLLLQI 632
Y+ PE + I +MK+ D+Y+ G++ +I
Sbjct: 217 YMAPEVLDDSI-NMKHFESFKRADIYAMGLVFWEI 250
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 425 FSFSDIKAAT--NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLS-ATSTQGLEEFK- 479
S S +AT + + KLGEG +G VYK + + A+KR+ +G+
Sbjct: 22 MSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI 81
Query: 480 NEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNI 539
EVSL LQH N++ + LI+EY N +++Y+ K ++
Sbjct: 82 REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND---------LKKYM---DKNPDV 129
Query: 540 IEGVTQGLLY-LQEYSNF----RVIHRDLKASNILL---DNELNP--KISDFGMAKLFRK 589
V + LY L NF R +HRDLK N+LL D P KI DFG+A+ F
Sbjct: 130 SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189
Query: 590 DVDEANTGRIVGTYGYVPPE-YVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646
+ + T I+ T Y PPE + YS D++S + +++ + + G SE
Sbjct: 190 PIRQF-THEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML--MKTPLFPGDSE 243
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 57
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 114
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ +DE VG
Sbjct: 115 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEM-ANEFVG 168
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 199
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 128
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 181
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
GL +LQ +I+RDLK N++LD+E + KI+DFGM K D T GT Y
Sbjct: 133 GLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDY 187
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
+ PE + Y D ++FGVLL ++++ + A + G E+
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ--APFEGEDED 227
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 128
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 129 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 181
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 13/211 (6%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKN-----EV 482
D+K+ + + LGEG F VYK + Q A+K++ ++ N E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 483 SLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
L L H N++ +L + L+++++ DL + VL +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
QGL YL ++ ++HRDLK +N+LLD K++DFG+AK F + A ++V
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXHQVVTR 176
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
+ P +Y + D+++ G +L +++
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 28/246 (11%)
Query: 427 FSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQ----EFAVKRLSA--TSTQGLEEFKN 480
D+ F+ LG+G FG V + L + + AVK L A ++ +EEF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 481 EVSLTARLQHVNLLRVLGYCTERDEN------MLIYEYLPNKSLDLYLF------DPIRR 528
E + H ++ +++G M+I ++ + L +L +P
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP--- 131
Query: 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA-KLF 587
+ L Q V + + G+ YL S+ IHRDL A N +L ++ ++DFG++ K++
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 588 RKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
D + ++ E + +Y++ DV++FGV + +I++ R Y EN
Sbjct: 189 SGDYYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMT--RGQTPYAGIEN 245
Query: 648 LNFLEY 653
Y
Sbjct: 246 AEIYNY 251
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSL 484
+D + N+ +G+G F V ++ G+E AV+ + T ++ L++ EV +
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRI 66
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ L+ EY + YL R + + + R + V+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVS 124
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
Q++ ++HRDLKA N+LLD ++N KI+DFG + +E G + T+
Sbjct: 125 AVQYCHQKF----IVHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDTFC 173
Query: 605 YVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
PP + KY DV+S GV+L ++S
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G FA+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L Y + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G FA+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L Y + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
pdb|1JNE|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
Length = 420
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 149/393 (37%), Gaps = 107/393 (27%)
Query: 40 PLSDINSALFTHLICAFAEVDSSTYQLSISSAN----QQYFSIFANSVRRKNPSIKTLLS 95
P +I +HL+ +A + Q + N + FS S++RK P +K LLS
Sbjct: 24 PDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSE-VTSLKRKYPHLKVLLS 82
Query: 96 IWNGQNSTYQSILGNKNINPS----VLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFW 151
+ G+ +I+P + + G+ + FI S+ + YGF G+DL +
Sbjct: 83 VG-----------GDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAY 131
Query: 152 LWPNSTDLNSLGILLDEWKA--------------SASDQPELT----------------L 181
+P + G L WK+ +A + + T L
Sbjct: 132 QFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLL 191
Query: 182 SMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAA-LYNPS------ 234
S+ V + + T + I ++ +++ +L +D+ P++ ++A +Y+P
Sbjct: 192 SLTVLPN-VNSTWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKDRL 250
Query: 235 SNISTDFGIREWLRRGFPANKLVLGARASG-----------------PGITIDGSMGYKF 277
++++ DF + WL +GFP+NK+ LG G P + G++
Sbjct: 251 AHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETSGPAPEGFQS 310
Query: 278 IRAFIQNYGYGAAPVYNASYVVNLFTSG-----------------------------ATW 308
+ + +Y + N N F G W
Sbjct: 311 QKPGLLSYAEICGKLSNPQ---NQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIW 367
Query: 309 INFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341
+++D ++ K +YA+ KNL G F LS DD
Sbjct: 368 VSYDDPDSASNKAAYARVKNLGGVALFDLSYDD 400
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F +G G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + K++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G FA+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L Y + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 23/216 (10%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSL 484
+D + N+ +G+G F V ++ G+E AVK + T ++ L++ EV +
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ L+ EY + YL R + + + I
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 545 QGLLYLQEYSNFR-VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
Q Y + + ++HRDLKA N+LLD ++N KI+DFG + +E G + +
Sbjct: 127 Q-------YCHQKFIVHRDLKAENLLLDADMNIKIADFGFS-------NEFTFGNKLDAF 172
Query: 604 GYVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
PP + KY DV+S GV+L ++S
Sbjct: 173 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F +G G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + K++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 441 NKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+LG G FG V++ G+ F K ++ KNE+S+ +L H L+ +
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPI--RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
++ E +LI E+L LFD I Y + + +N + +GL ++ E+S
Sbjct: 117 FEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS--- 169
Query: 558 VIHRDLKASNILLDNEL--NPKISDFGMA-KLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
++H D+K NI+ + + + KI DFG+A KL ++ + T T + PE V +
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT----ATAEFAAPEIVDRE 225
Query: 615 IYSMKYDVYSFGVL 628
D+++ GVL
Sbjct: 226 PVGFYTDMWAIGVL 239
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L+E ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + +++DFG+AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ + +LG G F V K L +F KR + +S +G+ E+ + EVS+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + + + +LI E + L +L + + L ++ ++ + G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYY 129
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPK----ISDFGMAKLFRKDVDEANTGR-IVGTYG 604
L + ++ H DLK NI+L + PK I DFG+A +D N + I GT
Sbjct: 130 LH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH----KIDFGNEFKNIFGTPE 182
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQE-FAVKRLS---ATSTQGLEEFKNEVSLTA 486
+ +F+ LG+G FG V + +E +A+K L +E E + A
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 487 RLQHVNLLRVLGYCTER-DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ 545
L L L C + D + EY+ L +Y + ++ + V ++
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGKF--KEPQAVFYAAEISI 131
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
GL +L + +I+RDLK N++LD+E + KI+DFGM K +D T GT Y
Sbjct: 132 GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDY 186
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+ PE + Y D +++GVLL ++++ +
Sbjct: 187 IAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F +G G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + K++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
++ L YL E +I+RDLK N+LLD+E + K++D+GM K + D +T GT
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST--FCGT 216
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
Y+ PE ++ Y D ++ GVL+ ++++ + G+S+N
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 261
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 73
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 130
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + ++ VG
Sbjct: 131 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVG 184
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 215
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 443 LGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYC 500
LG G F V R Q+ A+K ++ + +G E +NE+++ +++H N++ +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-IIEGVTQGLLYLQEYSNFRVI 559
LI + + L FD I ++ + +I V + YL + ++
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIV 138
Query: 560 HRDLKASNIL---LDNELNPKISDFGMAKLFRKDVDEANTGRIV----GTYGYVPPEYVK 612
HRDLK N+L LD + ISDFG++K+ + G ++ GT GYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVAPEVLA 191
Query: 613 KGIYSMKYDVYSFGVL 628
+ YS D +S GV+
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
pdb|1LL7|B Chain B, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 53/277 (19%)
Query: 36 GREFPLSDINSALFTHLICAFAEVD-------SSTYQLSISSANQQYFSIFANSV----- 83
GR D+ + FTH++ AFA + S T+ + + N+V
Sbjct: 16 GRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIK 75
Query: 84 -----RRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRT 138
++ N ++KTLLSI G +P+ + RK F ++S++
Sbjct: 76 QMYLLKKNNRNLKTLLSI------------GGWTYSPN-FKTPASTEEGRKKFADTSLKL 122
Query: 139 ARLYGFQGIDLFWLWP-NSTDLNSLGIL-------LDEWKASASDQPELTLSMAVRYSPT 190
+ GF GID+ W +P + N +L LD + A + + L++A P
Sbjct: 123 MKDLGFDGIDIDWQYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQ 182
Query: 191 HETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTG----IHAALYNPSSN-ISTDFGIRE 245
+ + M K L++ +L+AYD+ S + V+G + + P S S+D +++
Sbjct: 183 NYN-KLKLAEMDKYLDFWNLMAYDFSG-SWDKVSGHMSNVFPSTTKPESTPFSSDKAVKD 240
Query: 246 WLRRGFPANKLVLG--------ARASGPGITIDGSMG 274
+++ G PANK+VLG A G G + +G G
Sbjct: 241 YIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGG 277
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 116
Query: 494 LRVLGYCTER------------DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 173
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 174 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 227
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 228 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 258
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution
pdb|1LL4|A Chain A, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|B Chain B, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|C Chain C, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|D Chain D, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
Length = 392
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 117/277 (42%), Gaps = 53/277 (19%)
Query: 36 GREFPLSDINSALFTHLICAFAEVD-------SSTYQLSISSANQQYFSIFANSV----- 83
GR D+ + FTH++ AFA + S T+ + + N+V
Sbjct: 16 GRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIK 75
Query: 84 -----RRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRT 138
++ N ++KTLLSI G +P+ + RK F ++S++
Sbjct: 76 QMYLLKKNNRNLKTLLSI------------GGWTYSPN-FKTPASTEEGRKKFADTSLKL 122
Query: 139 ARLYGFQGIDLFWLWPNSTD--------LNSLGILLDEWKASASDQPELTLSMAVRYSPT 190
+ GF GID+ W +P L + LD + A + + L++A P
Sbjct: 123 MKDLGFDGIDIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQ 182
Query: 191 HETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTG----IHAALYNPSSN-ISTDFGIRE 245
+ + M K L++ +L+AYD+ S + V+G + + P S S+D +++
Sbjct: 183 NYN-KLKLAEMDKYLDFWNLMAYDFSG-SWDKVSGHMSNVFPSTTKPESTPFSSDKAVKD 240
Query: 246 WLRRGFPANKLVLG--------ARASGPGITIDGSMG 274
+++ G PANK+VLG A G G + +G G
Sbjct: 241 YIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGG 277
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|B Chain B, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|C Chain C, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|D Chain D, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 53/277 (19%)
Query: 36 GREFPLSDINSALFTHLICAFAEVD-------SSTYQLSISSANQQYFSIFANSV----- 83
GR D+ + FTH++ AFA + S T+ + + N+V
Sbjct: 16 GRGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPGDKWDEPGNNVYGCIK 75
Query: 84 -----RRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRT 138
++ N ++KTLLSI G +P+ + RK F ++S++
Sbjct: 76 QMYLLKKNNRNLKTLLSI------------GGWTYSPN-FKTPASTEEGRKKFADTSLKL 122
Query: 139 ARLYGFQGIDLFWLWP-NSTDLNSLGIL-------LDEWKASASDQPELTLSMAVRYSPT 190
+ GF GID+ W +P + N +L LD + A + + L++A P
Sbjct: 123 MKDLGFDGIDINWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGPQ 182
Query: 191 HETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTG----IHAALYNPSSN-ISTDFGIRE 245
+ + M K L++ +L+AYD+ S + V+G + + P S S+D +++
Sbjct: 183 NYN-KLKLAEMDKYLDFWNLMAYDFSG-SWDKVSGHMSNVFPSTTKPESTPFSSDKAVKD 240
Query: 246 WLRRGFPANKLVLG--------ARASGPGITIDGSMG 274
+++ G PANK+VLG A G G + +G G
Sbjct: 241 YIKAGVPANKIVLGMPLYGRAFASTDGIGTSFNGVGG 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 443 LGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYC 500
LG G F V R Q+ A+K ++ + +G E +NE+++ +++H N++ +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-IIEGVTQGLLYLQEYSNFRVI 559
LI + + L FD I ++ + +I V + YL + ++
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIV 138
Query: 560 HRDLKASNIL---LDNELNPKISDFGMAKLFRKDVDEANTGRIV----GTYGYVPPEYVK 612
HRDLK N+L LD + ISDFG++K+ + G ++ GT GYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVAPEVLA 191
Query: 613 KGIYSMKYDVYSFGVL 628
+ YS D +S GV+
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 440 ANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQHVN 492
+LG G F V K L +F KR S S +G+ EE + EVS+ ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPN 76
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++ + R + +LI E + L +L ++ L ++ + I+ + G+ YL
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH- 132
Query: 553 YSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++ H DLK NI+L ++ P K+ DFG+A V+ N I GT +V P
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAP 187
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E V ++ D++S GV+ ++S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 54
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 111
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 165
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
++ L YL E +I+RDLK N+LLD+E + K++D+GM K + D T GT
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGT 184
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
Y+ PE ++ Y D ++ GVL+ ++++ + G+S+N
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 229
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 24 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 137
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 138 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGTPEYLA 192
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEM 217
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 204 MLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 150 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 205 MLNSKG-YTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 141 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 196 MLNSKG-YTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 203 MLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 54
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 111
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 165
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 54
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 111
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 165
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG---RIVGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 203 MLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG---RIVGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG V T Y PE
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 204 MLNSKG-YTKSIDIWSVGCILAEMLSNR 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 197 MLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 443 LGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYC 500
LG G F V R Q+ A+K ++ + +G E +NE+++ +++H N++ +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-IIEGVTQGLLYLQEYSNFRVI 559
LI + + L FD I ++ + +I V + YL + ++
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIV 138
Query: 560 HRDLKASNIL---LDNELNPKISDFGMAKLFRKDVDEANTGRIV----GTYGYVPPEYVK 612
HRDLK N+L LD + ISDFG++K+ + G ++ GT GYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVAPEVLA 191
Query: 613 KGIYSMKYDVYSFGVL 628
+ YS D +S GV+
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 30/217 (13%)
Query: 435 NNFSSANKLGEGGFGPVY---KGNLPRGQEFAVKRLSATSTQGLEEFKN---EVSLTARL 488
++F +G+G FG V K + + +A+K ++ E +N E+ + L
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKM--YAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 489 QHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG-----V 543
+H L+ L Y + +E+M + +DL L +R ++ Q+ V+ E +
Sbjct: 73 EHPFLVN-LWYSFQDEEDMFMV-------VDLLLGGDLRYHL---QQNVHFKEETVKLFI 121
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
+ ++ L N R+IHRD+K NILLD + I+DF +A + + E + GT
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR---ETQITTMAGTK 178
Query: 604 GYVPPEYV--KKGI-YSMKYDVYSFGVLLLQIISSKR 637
Y+ PE +KG YS D +S GV +++ +R
Sbjct: 179 PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 142 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 197 MLNSKG-YTKSIDIWSVGCILAEMLSNR 223
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSL 484
+D + N+ +G+G F V ++ G+E AVK + T ++ L++ EV +
Sbjct: 7 ADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRI 66
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
L H N++++ L+ EY + YL R + + + I
Sbjct: 67 XKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAV 126
Query: 545 QGLLYLQEYSNFR-VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
Q Y + + ++HRDLKA N+LLD + N KI+DFG + +E G + +
Sbjct: 127 Q-------YCHQKFIVHRDLKAENLLLDADXNIKIADFGFS-------NEFTFGNKLDAF 172
Query: 604 GYVPPEYVKKGIYSMKY-----DVYSFGVLLLQIIS 634
PP + KY DV+S GV+L ++S
Sbjct: 173 CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
++ L YL E +I+RDLK N+LLD+E + K++D+GM K + D T GT
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGT 169
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
Y+ PE ++ Y D ++ GVL+ ++++ + G+S+N
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 214
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 203 MLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
++ L YL E +I+RDLK N+LLD+E + K++D+GM K + D T GT
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGT 173
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647
Y+ PE ++ Y D ++ GVL+ ++++ + G+S+N
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 440 ANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQHVN 492
+LG G F V K L +F KR S S +G+ EE + EVS+ ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++ + R + +LI E + L +L ++ L ++ + I+ + G+ YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH- 132
Query: 553 YSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++ H DLK NI+L ++ P K+ DFG+A V+ N I GT +V P
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAP 187
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E V ++ D++S GV+ ++S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ +LG G F V K L +F KR S S +G+ EE + EVS+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + R + +LI E + L +L ++ L ++ + I+ + G+ Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L ++ H DLK NI+L ++ P K+ DFG+A V+ N I GT +
Sbjct: 131 LH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEF 184
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
V PE V ++ D++S GV+ ++S
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 443 LGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYC 500
LG G F V R Q+ A+K ++ + +G E +NE+++ +++H N++ +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-IIEGVTQGLLYLQEYSNFRVI 559
LI + + L FD I ++ + +I V + YL + ++
Sbjct: 86 ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIV 138
Query: 560 HRDLKASNIL---LDNELNPKISDFGMAKLFRKDVDEANTGRIV----GTYGYVPPEYVK 612
HRDLK N+L LD + ISDFG++K+ + G ++ GT GYV PE +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM-------EDPGSVLSTACGTPGYVAPEVLA 191
Query: 613 KGIYSMKYDVYSFGVL 628
+ YS D +S GV+
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 81
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 138
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 139 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 192
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 193 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 223
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 409 TPAAEYFDSDTPN--LQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVK 465
P A+Y DS N LQ N F LG+GGFG V + G+ +A K
Sbjct: 156 APFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACK 215
Query: 466 RLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYL 522
+L + + ++ L+ VN + L Y E +D L+ + L ++
Sbjct: 216 KLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI 275
Query: 523 FDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582
+ + + + V + G L++ R+++RDLK NILLD+ + +ISD G
Sbjct: 276 YH-MGQAGFPEARAVFYAAEICCG---LEDLHRERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 583 MAKLFRKDVDEANT--GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+A V E T GR VGT GY+ PE VK Y+ D ++ G LL ++I+ +
Sbjct: 332 LA----VHVPEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 54
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 111
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 165
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V+K + P G A K + E+ R Q +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL-----------EIKPAIRNQIIRE 54
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L R + Q +
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSI 111
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 112 AVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 165
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 196
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQ 489
+ +LG G F V K L +F KR S S +G+ EE + EVS+ ++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
H N++ + R + +LI E + L +L ++ L ++ + I+ + G+ Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNY 130
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGY 605
L ++ H DLK NI+L ++ P K+ DFG+A V+ N I GT +
Sbjct: 131 LH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEF 184
Query: 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
V PE V ++ D++S GV+ ++S
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 203 MLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 33/211 (15%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
++F ++LG G G V K + P G A K + E+ R Q +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHL-----------EIKPAIRNQIIRE 64
Query: 494 LRVLGYCTE------------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+VL C E + E++ SLD L + +R + +V+I
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSI-- 121
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
V +GL YL+E +++HRD+K SNIL+++ K+ DFG++ + AN+ VG
Sbjct: 122 AVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANS--FVG 175
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQI 632
T Y+ PE ++ YS++ D++S G+ L+++
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVEL 206
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKR-LSATSTQGLEEFK-NEVSLTARLQ 489
+ + + +GEG +G V K N G+ A+K+ L + + +++ E+ L +L+
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 490 HVNLLRVLGYCTERDENMLIYEYLPNKSLD-LYLFDPIRRYVLDWQKRVNIIEGVTQGLL 548
H NL+ +L C ++ L++E++ + LD L LF LD+Q + + G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP----NGLDYQVVQKYLFQIINGIG 138
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI----VGTYG 604
+ ++ +IHRD+K NIL+ K+ DFG A+ A G + V T
Sbjct: 139 FCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTL------AAPGEVYDDEVATRW 189
Query: 605 YVPPEYVKKGI-YSMKYDVYSFGVLLLQI 632
Y PE + + Y DV++ G L+ ++
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 409 TPAAEYFDSDTPN--LQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVK 465
P A+Y DS N LQ N F LG+GGFG V + G+ +A K
Sbjct: 156 APFADYLDSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACK 215
Query: 466 RLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYL 522
+L + + ++ L+ VN + L Y E +D L+ + L ++
Sbjct: 216 KLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI 275
Query: 523 FDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582
+ + + + V + G L++ R+++RDLK NILLD+ + +ISD G
Sbjct: 276 YH-MGQAGFPEARAVFYAAEICCG---LEDLHRERIVYRDLKPENILLDDHGHIRISDLG 331
Query: 583 MAKLFRKDVDEANT--GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+A V E T GR VGT GY+ PE VK Y+ D ++ G LL ++I+ +
Sbjct: 332 LA----VHVPEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 23/207 (11%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY-CT 501
+G+G +G V++G L G+ AVK S+ Q + E+ T L+H N+L + T
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 502 ERDENM---LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ-----EY 553
R+ + LI Y + SL +D ++R L+ + + GL +L
Sbjct: 74 SRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTYGYVPPEYV 611
+ HRD K+ N+L+ + L I+D G+A + + D + G VGT Y+ PE +
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 612 KKGIYSMKY------DVYSFGVLLLQI 632
+ I + + D+++FG++L +I
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 440 ANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQHVN 492
+LG G F V K L +F KR S S +G+ EE + EVS+ ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++ + R + +LI E + L +L ++ L ++ + I+ + G+ YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH- 132
Query: 553 YSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++ H DLK NI+L ++ P K+ DFG+A V+ N I GT +V P
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAP 187
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E V ++ D++S GV+ ++S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 440 ANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATSTQGL--EEFKNEVSLTARLQHVN 492
+LG G F V K L +F KR S S +G+ EE + EVS+ ++ H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE 552
++ + R + +LI E + L +L ++ L ++ + I+ + G+ YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLH- 132
Query: 553 YSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++ H DLK NI+L ++ P K+ DFG+A V+ N I GT +V P
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAP 187
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E V ++ D++S GV+ ++S
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLL 494
++ +GEG +G V + R A+K++S Q + E+ + R +H N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
+ + Y+ ++ L+ ++ L + + +GL Y+ +
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN 164
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG---RIVGTYGYVPPEYV 611
V+HRDLK SN+L++ + KI DFG+A++ D + +TG V T Y PE +
Sbjct: 165 ---VLHRDLKPSNLLINTTCDLKICDFGLARI--ADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 612 --KKGIYSMKYDVYSFGVLLLQIISSK 636
KG Y+ D++S G +L +++S++
Sbjct: 220 LNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A++++S Q + E+ + R +H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 203 MLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKGNL--PRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 159
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 217
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 218 TSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKG--NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 136
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 194
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 195 TSASDVWMFGVCMWEIL 211
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V NL + + A+K++S Q + E+ + R +H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 203 MLNSKG-YTKSIDIWSVGCILAEMLSNR 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFY--AAQIV 144
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 199
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKG--NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 133
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 191
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 201 MLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 199 MLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKR-LSATSTQGLEEFK-NEVSLTARLQHV 491
+ K+GEG +G V+K N GQ A+K+ L + +++ E+ + +L+H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT-QGLLYL 550
NL+ +L + L++EY + L + D +R V + ++++ +T Q L +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPE-----HLVKSITWQTLQAV 115
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPE- 609
IHRD+K NIL+ K+ DFG A+L D + V T Y PE
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPEL 173
Query: 610 YVKKGIYSMKYDVYSFGVLLLQIIS 634
V Y DV++ G + +++S
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKG--NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 134
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 192
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 193 TSASDVWMFGVCMWEIL 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKGNL--PRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKGNL--PRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 152 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 207 MLNSKG-YTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 199 MLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 403 RTPGTSTPAAEYFDS---DTPNLQVFSFSDIKAATNN--------FSSANKLGEGGFGPV 451
R G AA F+ D+P+L ++ N +S ++G GG V
Sbjct: 13 RGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKV 72
Query: 452 YKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGYCTERDENM 507
++ + Q +A+K L Q L+ ++NE++ +LQ + ++R+ Y +
Sbjct: 73 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQ 129
Query: 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLYLQEYSNFRVIHRDLK 564
IY + ++DL + ++ + W+++ N++E V ++H DLK
Sbjct: 130 YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV-------HTIHQHGIVHSDLK 182
Query: 565 ASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK---- 619
+N L+ D L K+ DFG+A + D VGT Y+PPE +K S +
Sbjct: 183 PANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 240
Query: 620 -------YDVYSFGVLL 629
DV+S G +L
Sbjct: 241 KSKISPKSDVWSLGCIL 257
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKGNL--PRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R+Y LD + ++ L YL+ + R
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLE---SKR 128
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 186
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 403 RTPGTSTPAAEYFDS---DTPNLQVFSFSDIKAATNN--------FSSANKLGEGGFGPV 451
R G AA F+ D+P+L ++ N +S ++G GG V
Sbjct: 13 RGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKV 72
Query: 452 YKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGYCTERDENM 507
++ + Q +A+K L Q L+ ++NE++ +LQ + ++R+ Y +
Sbjct: 73 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQ 129
Query: 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLYLQEYSNFRVIHRDLK 564
IY + ++DL + ++ + W+++ N++E V ++H DLK
Sbjct: 130 YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV-------HTIHQHGIVHSDLK 182
Query: 565 ASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK---- 619
+N L+ D L K+ DFG+A + D VGT Y+PPE +K S +
Sbjct: 183 PANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 240
Query: 620 -------YDVYSFGVLL 629
DV+S G +L
Sbjct: 241 KSKISPKSDVWSLGCIL 257
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 199 MLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKN-EVSLTARL 488
+A N+ + ++G G G V+K + G AVK++ + + EE K + L L
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK--EENKRILMDLDVVL 78
Query: 489 QHVN---LLRVLGYCTERDENMLIYEYLPN--KSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
+ + +++ G + + E + + L + PI +L + +
Sbjct: 79 KSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAI 133
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
+ L YL+E VIHRD+K SNILLD K+ DFG++ VD+ R G
Sbjct: 134 VKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL---VDDKAKDRSAGCA 188
Query: 604 GYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSK 636
Y+ PE + K Y ++ DV+S G+ L+++ + +
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKG--NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R++ LD + ++ L YL+ R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL--PIKWMAPESINFRRF 189
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 164 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 219 MLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 31 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 144
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 145 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 199
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEM 224
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 199 MLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 59 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 172
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 227
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEM 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 66/267 (24%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVN 492
+F +G GGFG V++ N +A+KR+ + + E+ EV A+L+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65
Query: 493 LLRV----LGYCTERDENMLIYEYLPNKSLDLYLFDP---------IRRY---------- 529
++R L E+ + + +L ++S D L P IRR
Sbjct: 66 IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125
Query: 530 ----------------------VLDWQKRVNIIEGVTQGL---LYLQ-----EYSNFR-V 558
+ DW R +E G+ +++Q E+ + + +
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE----------ANTGRIVGTYGYVPP 608
+HRDLK SNI + K+ DFG+ +D +E A VGT Y+ P
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP 245
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIISS 635
E + YS K D++S G++L +++ S
Sbjct: 246 EQIHGNNYSHKVDIFSLGLILFELLYS 272
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVK----RLSATSTQGL--EEFKNEVSLTAR 487
+++ +LG G F V K G+E+A K R ++S +G+ EE + EV++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
++H N++ + + + +LI E + L +L + + L + ++ + G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGV 121
Query: 548 LYLQEYSNFRVIHRDLKASNILL--DNELNPKIS--DFGMAKLFRKDVDEANTGRIVGTY 603
YL + R+ H DLK NI+L N NP+I DFG+A + N I GT
Sbjct: 122 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTP 175
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 176 EFVAPEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY-CT 501
+G+G +G V++G+ +G+ AVK S+ + + E+ T L+H N+L + T
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 102
Query: 502 ERDENM---LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ-----EY 553
R + LI Y SL +D ++ LD + I+ + GL +L
Sbjct: 103 SRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTYGYVPPEYV 611
+ HRDLK+ NIL+ I+D G+A + + ++ + G VGT Y+ PE +
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 612 KKGIYS------MKYDVYSFGVLLLQI 632
+ I + D+++FG++L ++
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 410 PAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKR-L 467
PA +Y + P F D + + K+G+G FG V+K + GQ+ A+K+ L
Sbjct: 2 PAKQYDSVECP------FCD---EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL 52
Query: 468 SATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENM--------LIYEYLPNKSL 518
+G E+ + L+H N++ ++ C + L++++ +
Sbjct: 53 MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 112
Query: 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578
L L + + ++ L KRV ++ + GL Y+ +++HRD+KA+N+L+ + K+
Sbjct: 113 GL-LSNVLVKFTLSEIKRV--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 166
Query: 579 SDFGMAKLFR--KDVDEANTGRIVGTYGYVPPE-YVKKGIYSMKYDVYSFGVLLLQI 632
+DFG+A+ F K+ V T Y PPE + + Y D++ G ++ ++
Sbjct: 167 ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 39 AHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + K++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVK----RLSATSTQGL--EEFKNEVSLTAR 487
+++ +LG G F V K G+E+A K R ++S +G+ EE + EV++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
++H N++ + + + +LI E + L +L + + L + ++ + G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGV 128
Query: 548 LYLQEYSNFRVIHRDLKASNILL--DNELNPKIS--DFGMAKLFRKDVDEANTGR-IVGT 602
YL + R+ H DLK NI+L N NP+I DFG+A ++ N + I GT
Sbjct: 129 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH----KIEAGNEFKNIFGT 181
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY-CT 501
+G+G +G V++G+ +G+ AVK S+ + + E+ T L+H N+L + T
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 73
Query: 502 ERDENM---LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ-----EY 553
R + LI Y SL +D ++ LD + I+ + GL +L
Sbjct: 74 SRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTYGYVPPEYV 611
+ HRDLK+ NIL+ I+D G+A + + ++ + G VGT Y+ PE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 612 KKGIYS------MKYDVYSFGVLLLQI 632
+ I + D+++FG++L ++
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 30/210 (14%)
Query: 443 LGEGGFGPVYKGNLPR----GQ----EFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
LG+G F ++KG GQ E +K L E F S+ ++L H +L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
G C DEN+L+ E++ SLD YL + W ++ + + + + +L+E +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFLEENT 133
Query: 555 NFRVIHRDLKASNILLDNEL-----NP---KISDFGMA-KLFRKDVDEANTGRIVGTYGY 605
+IH ++ A NILL E NP K+SD G++ + KD+ + RI +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE---RI----PW 183
Query: 606 VPPEYVKKGI-YSMKYDVYSFGVLLLQIIS 634
VPPE ++ ++ D +SFG L +I S
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICS 213
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + YL + L+ ++ L + + +GL Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 164 N---VLHRDLKPSNLLLNTTXDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 219 MLNSKG-YTKSIDIWSVGCILAEMLSNR 245
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY-CT 501
+G+G +G V++G+ +G+ AVK S+ + + E+ T L+H N+L + T
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIASDMT 73
Query: 502 ERDENM---LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ-----EY 553
R + LI Y SL +D ++ LD + I+ + GL +L
Sbjct: 74 SRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR--IVGTYGYVPPEYV 611
+ HRDLK+ NIL+ I+D G+A + + ++ + G VGT Y+ PE +
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 612 KKGIYS------MKYDVYSFGVLLLQI 632
+ I + D+++FG++L ++
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 410 PAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKR-L 467
PA +Y + P F D + + K+G+G FG V+K + GQ+ A+K+ L
Sbjct: 2 PAKQYDSVECP------FCD---EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL 52
Query: 468 SATSTQGLE-EFKNEVSLTARLQHVNLLRVLGYCTERDENM--------LIYEYLPNKSL 518
+G E+ + L+H N++ ++ C + L++++ +
Sbjct: 53 MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLA 112
Query: 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578
L L + + ++ L KRV ++ + GL Y+ +++HRD+KA+N+L+ + K+
Sbjct: 113 GL-LSNVLVKFTLSEIKRV--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKL 166
Query: 579 SDFGMAKLFR--KDVDEANTGRIVGTYGYVPPE-YVKKGIYSMKYDVYSFGVLLLQI 632
+DFG+A+ F K+ V T Y PPE + + Y D++ G ++ ++
Sbjct: 167 ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 113/239 (47%), Gaps = 33/239 (13%)
Query: 410 PAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLS 468
PA +Y + P F D + + K+G+G FG V+K + GQ+ A+K++
Sbjct: 2 PAKQYDSVECP------FCD---EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL 52
Query: 469 ATSTQGLEEFK----NEVSLTARLQHVNLLRVLGYCTERDENM--------LIYEYLPNK 516
+ + E F E+ + L+H N++ ++ C + L++++ +
Sbjct: 53 MENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD 110
Query: 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576
L L + + ++ L KRV ++ + GL Y+ +++HRD+KA+N+L+ +
Sbjct: 111 LAGL-LSNVLVKFTLSEIKRV--MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVL 164
Query: 577 KISDFGMAKLFR--KDVDEANTGRIVGTYGYVPPE-YVKKGIYSMKYDVYSFGVLLLQI 632
K++DFG+A+ F K+ V T Y PPE + + Y D++ G ++ ++
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYC 500
LGEG V NL QE+AVK + EV + + Q H N+L ++ +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
E D L++E + S+ ++ RR+ + + V +++ V L +L N + H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEASV-VVQDVASALDFLH---NKGIAH 134
Query: 561 RDLKASNILLD--NELNP-KISDFGMAKLFR--KDVDEANTGRIV---GTYGYVPPEYV- 611
RDLK NIL + N+++P KI DFG+ + D +T ++ G+ Y+ PE V
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 612 ----KKGIYSMKYDVYSFGVLLLQIIS 634
+ IY + D++S GV+L ++S
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + R +H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 199 MLNSKG-YTKSIDIWSVGCILAEMLSNR 225
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-----STQGLEEFKN----EVSL 484
N+ LG G V + + P +E+AVK + T S + ++E + EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 485 TARLQ-HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
++ H N++++ L+++ + L YL + + L ++ I+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRAL 133
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR-IVGT 602
+ + L + ++HRDLK NILLD+++N K++DFG F +D R + GT
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLRSVCGT 186
Query: 603 YGYVPPEYVKKGI------YSMKYDVYSFGVLLLQIIS 634
Y+ PE ++ + Y + D++S GV++ +++
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN-- 492
+S ++G GG V++ + Q +A+K L Q L+ ++NE++ +LQ +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLY 549
++R+ Y + IY + ++DL + ++ + W+++ N++E V
Sbjct: 90 IIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 140
Query: 550 LQEYSNFRVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++H DLK +N L+ D L K+ DFG+A + D VGT Y+PP
Sbjct: 141 -HTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 609 EYVKKGIYSMK-----------YDVYSFGVLL 629
E +K S + DV+S G +L
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN-- 492
+S ++G GG V++ + Q +A+K L Q L+ ++NE++ +LQ +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLY 549
++R+ Y + IY + ++DL + ++ + W+++ N++E V
Sbjct: 71 IIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 121
Query: 550 LQEYSNFRVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++H DLK +N L+ D L K+ DFG+A + D VGT Y+PP
Sbjct: 122 -HTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 609 EYVKKGIYSMK-----------YDVYSFGVLL 629
E +K S + DV+S G +L
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-----STQGLEEFKN----EVSL 484
N+ LG G V + + P +E+AVK + T S + ++E + EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 485 TARLQ-HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
++ H N++++ L+++ + L YL + + L ++ I+ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRAL 133
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR-IVGT 602
+ + L + ++HRDLK NILLD+++N K++DFG F +D R + GT
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLREVCGT 186
Query: 603 YGYVPPEYVKKGI------YSMKYDVYSFGVLLLQIIS 634
Y+ PE ++ + Y + D++S GV++ +++
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN-- 492
+S ++G GG V++ + Q +A+K L Q L+ ++NE++ +LQ +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLY 549
++R+ Y + IY + ++DL + ++ + W+++ N++E V
Sbjct: 74 IIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 124
Query: 550 LQEYSNFRVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++H DLK +N L+ D L K+ DFG+A + D VGT Y+PP
Sbjct: 125 -HTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 181
Query: 609 EYVKKGIYSMK-----------YDVYSFGVLL 629
E +K S + DV+S G +L
Sbjct: 182 EAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVK----RLSATSTQGL--EEFKNEVSLTAR 487
+++ +LG G F V K G+E+A K R +S +G+ EE + EV++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 488 LQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
++H N++ + + + +LI E + L +L + + L + ++ + G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGV 142
Query: 548 LYLQEYSNFRVIHRDLKASNILL--DNELNPKIS--DFGMAKLFRKDVDEANTGRIVGTY 603
YL R+ H DLK NI+L N NP+I DFG+A + N I GT
Sbjct: 143 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTP 196
Query: 604 GYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE V ++ D++S GV+ ++S
Sbjct: 197 EFVAPEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 31/211 (14%)
Query: 441 NKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
KLGEGGF V L G +A+KR+ Q EE + E + H N+LR++ Y
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 500 CTE----RDENMLIYEYLPNKSLDLYLFDPIRRY-----VLDWQKRVNIIEGVTQGL--L 548
C + E L+ + + L++ I R L + + ++ G+ +GL +
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGT----LWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 549 YLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV-------G 601
+ + Y+ HRDLK +NILL +E P + D G V+ + +
Sbjct: 151 HAKGYA-----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 602 TYGYVPPEYV---KKGIYSMKYDVYSFGVLL 629
T Y PE + + DV+S G +L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVL 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-----STQGLEEFKN----EVSL 484
N+ LG G V + + P +E+AVK + T S + ++E + EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 485 TARLQ-HVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV 543
++ H N++++ L+++ + L YL + + L ++ I+ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRAL 120
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR-IVGT 602
+ + L + ++HRDLK NILLD+++N K++DFG F +D R + GT
Sbjct: 121 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG----FSCQLDPGEKLREVCGT 173
Query: 603 YGYVPPEYVKKGI------YSMKYDVYSFGVLLLQIIS 634
Y+ PE ++ + Y + D++S GV++ +++
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ GL +L + + +I+RDLK N+LLD++ N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643
G++ PE + Y D ++ GV L ++I+++ R G
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN-- 492
+S ++G GG V++ + Q +A+K L Q L+ ++NE++ +LQ +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLY 549
++R+ Y + IY + ++DL + ++ + W+++ N++E V
Sbjct: 70 IIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV------ 120
Query: 550 LQEYSNFRVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608
++H DLK +N L+ D L K+ DFG+A + D VGT Y+PP
Sbjct: 121 -HTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 177
Query: 609 EYVKKGIYSMK-----------YDVYSFGVLL 629
E +K S + DV+S G +L
Sbjct: 178 EAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ GL +L + + +I+RDLK N+LLD++ N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643
G++ PE + Y D ++ GV L ++I+++ R G
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 12/207 (5%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATST-QGLEEFK-NEVSLTARLQHV 491
+ K+GEG +G V+K E A+KR+ +G+ E+ L L+H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ 551
N++R+ + L++E+ ++ L Y FD LD + + + + +GL +
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCH 118
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV 611
+ V+HRDLK N+L++ K++DFG+A+ F V + +V T Y PP+ +
Sbjct: 119 SRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVV-TLWYRPPDVL 173
Query: 612 -KKGIYSMKYDVYSFGVLLLQIISSKR 637
+YS D++S G + ++ ++ R
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ GL +L + + +I+RDLK N+LLD++ N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643
G++ PE + Y D ++ GV L ++I+++ R G
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+ GL +L + + +I+RDLK N+LLD++ N +ISD G+A + + T GT
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643
G++ PE + Y D ++ GV L ++I+++ R G
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V ++ G +A+K L L++ ++ ++ LQ
Sbjct: 38 AHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 109/257 (42%), Gaps = 42/257 (16%)
Query: 403 RTPGTSTPAAEYFDS---DTPNLQVFSFSDIKAATNN--------FSSANKLGEGGFGPV 451
R G AA F+ D+P+L ++ N +S ++G GG V
Sbjct: 13 RGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKV 72
Query: 452 YKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGYCTERDENM 507
++ + Q +A+K L Q L+ ++NE++ +LQ + ++R+ Y +
Sbjct: 73 FQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY---EITDQ 129
Query: 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQGLLYLQEYSNFRVIHRDLK 564
IY + ++DL + ++ + W+++ N++E V ++H DLK
Sbjct: 130 YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAV-------HTIHQHGIVHSDLK 182
Query: 565 ASNILL-DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMK---- 619
+N L+ D L K+ DFG+A + D VG Y+PPE +K S +
Sbjct: 183 PANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240
Query: 620 -------YDVYSFGVLL 629
DV+S G +L
Sbjct: 241 KSKISPKSDVWSLGCIL 257
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKGNL--PRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R++ LD + ++ L YL+ + R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 189
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 95/197 (48%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKG--NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R++ LD + ++ L YL+ + R
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE---SKR 511
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ + K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 569
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 443 LGEGGFGPVYKGNLPR----GQ----EFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
LG+G F ++KG GQ E +K L E F S+ ++L H +L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
G C DEN+L+ E++ SLD YL + W ++ + + + + +L+E +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFLEENT 133
Query: 555 NFRVIHRDLKASNILLDNEL-----NP---KISDFGMA-KLFRKDVDEANTGRIVGTYGY 605
+IH ++ A NILL E NP K+SD G++ + KD+ + RI +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQE---RI----PW 183
Query: 606 VPPEYVKKGI-YSMKYDVYSFGVLLLQIIS----------SKRNARYYGTSENL 648
VPPE ++ ++ D +SFG L +I S S+R ++Y L
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL 237
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 427 FSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVK--RLSATSTQGLEEFKNEVSL 484
F + +S ++G GG V++ + Q +A+K L Q L+ ++NE++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 485 TARLQHVN--LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NI 539
+LQ + ++R+ Y + IY + ++DL + ++ + W+++ N+
Sbjct: 80 LNKLQQHSDKIIRLYDY---EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNM 136
Query: 540 IEGVTQGLLYLQEYSNFRVIHRDLKASNILL-DNELNPKISDFGMAKLFRKDVDEANTGR 598
+E V ++H DLK +N L+ D L K+ DFG+A + D
Sbjct: 137 LEAV-------HTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDXXXVVKDS 187
Query: 599 IVGTYGYVPPEYVKKGIYSMK-----------YDVYSFGVLL 629
VGT Y+PPE +K S + DV+S G +L
Sbjct: 188 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ Q+ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAA 233
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 90/212 (42%), Gaps = 12/212 (5%)
Query: 429 DIKAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTAR 487
D K N+F LG+G FG V G+ +A+K L +E + V+ +
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 488 LQHVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
LQ+ L L Y + D + EY L +L R V ++ +
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIV 120
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
L YL V++RD+K N++LD + + KI+DFG+ K D A GT
Sbjct: 121 SALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 175
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+ PE ++ Y D + GV++ +++ +
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 34/226 (15%)
Query: 429 DIKAATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTAR 487
D +A + LG+GGFG V+ G+ L + A+K + G + V+
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 488 LQ----------HVNLLRVLGYCTERDENMLIYEY-LPNKSLDLYLFDPIRRYVLDWQKR 536
+ H ++R+L + ++ ML+ E LP + L FD Y+ ++
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDL----FD----YI---TEK 133
Query: 537 VNIIEGVT-----QGLLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKD 590
+ EG + Q + +Q + V+HRD+K NIL+D K+ DFG L
Sbjct: 134 GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-- 191
Query: 591 VDEANTGRIVGTYGYVPPEYVKKGIY-SMKYDVYSFGVLLLQIISS 635
DE T GT Y PPE++ + Y ++ V+S G+LL ++
Sbjct: 192 -DEPYTD-FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 435 NNFSSANKLGEG-GFGPVYKGNLPRG----QEFAVKRLSATSTQGLE---EFKNEVSLTA 486
++ S +LGE GFG + + +L R ++ AVK L A + F+ E A
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 487 RLQHVNLLRVLGYCTERDENM------LIYEYLPNKSLD--LYLFDPIRRYVLDWQKRVN 538
L H ++ V Y T E ++ EY+ +L ++ P + ++ +
Sbjct: 68 ALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIE 120
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN--- 595
+I Q L + + +IHRD+K +NI++ K+ DFG+A+ D N
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI---ADSGNSVT 174
Query: 596 -TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
T ++GT Y+ PE + + DVYS G +L ++++ +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGL--EEFKNEVSLTARLQHV 491
+ S +G G +G V R G++ A+K+LS + + E+ L +QH
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 83
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
N++ +L T P SL D YL P + L + E Q L
Sbjct: 84 NVIGLLDVFT------------PASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL 131
Query: 548 LY-----LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+Y L+ + V+HRDLK N+ ++ + KI DFG+A + D TG +V T
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMTGYVV-T 186
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
Y PE + + Y+ D++S G ++ ++++ K
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 11/212 (5%)
Query: 429 DIKAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTAR 487
D + N F LG+G FG V G+ +A+K L +E + ++
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 488 LQHVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVT 544
LQ+ L L Y + D + EY L +L R V + +
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIV 120
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604
L YL N V++RDLK N++LD + + KI+DFG+ K K D A GT
Sbjct: 121 SALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPE 176
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
Y+ PE ++ Y D + GV++ +++ +
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 443 LGEGGFGPVYKGNLP--RGQEF--AVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVL 497
LGEG FG VY+G +G++ AVK T E+F +E + L H ++++++
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ------ 551
G E + +I E P L YL ++ N ++ +T L LQ
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYL-----------ERNKNSLKVLTLVLYSLQICKAMA 139
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR-KDVDEANTGRIVGTYGYVPPEY 610
+ +HRD+ NIL+ + K+ DFG+++ +D +A+ R+ ++ PE
Sbjct: 140 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPES 197
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ DV+ F V + +I+S
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILS 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 30/215 (13%)
Query: 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGL--EEFKNEVSLTARLQHV 491
+ S +G G +G V R G++ A+K+LS + + E+ L +QH
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
N++ +L T P SL D YL P + L + E Q L
Sbjct: 102 NVIGLLDVFT------------PASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYL 149
Query: 548 LY-----LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
+Y L+ + V+HRDLK N+ ++ + KI DFG+A + D TG +V T
Sbjct: 150 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMTGYVV-T 204
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
Y PE + + Y+ D++S G ++ ++++ K
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 443 LGEGGFGPVYKGNLP--RGQEF--AVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVL 497
LGEG FG VY+G +G++ AVK T E+F +E + L H ++++++
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ------ 551
G E + +I E P L YL ++ N ++ +T L LQ
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL-----------ERNKNSLKVLTLVLYSLQICKAMA 127
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR-KDVDEANTGRIVGTYGYVPPEY 610
+ +HRD+ NIL+ + K+ DFG+++ +D +A+ R+ ++ PE
Sbjct: 128 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPES 185
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ DV+ F V + +I+S
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILS 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + +H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 146 N---VLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 201 MLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 26/204 (12%)
Query: 443 LGEGGFGPVYKGNLP--RGQEF--AVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVL 497
LGEG FG VY+G +G++ AVK T E+F +E + L H ++++++
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ------ 551
G E + +I E P L YL ++ N ++ +T L LQ
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL-----------ERNKNSLKVLTLVLYSLQICKAMA 123
Query: 552 EYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR-KDVDEANTGRIVGTYGYVPPEY 610
+ +HRD+ NIL+ + K+ DFG+++ +D +A+ R+ ++ PE
Sbjct: 124 YLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPES 181
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+ ++ DV+ F V + +I+S
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 156
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 157 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 208
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 27/212 (12%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVN- 492
+ + + +G G +G V ++ G + AVK+LS S + E+ L ++H N
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 493 --LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-----IIEGVTQ 545
LL V T +E +Y L +L ++ QK + +I + +
Sbjct: 113 IGLLDVFTPATSLEEFNDVY-------LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 546 GLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V T Y
Sbjct: 166 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YVATRWY 217
Query: 606 VPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
PE + + Y+M D++S G ++ ++++ +
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 156
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 157 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 208
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ Q
Sbjct: 39 AHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY P + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + K++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+++ +LG G FG V++ G FA K + E + E+ + L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + +E ++IYE++ L + D + D + V + V +GL ++ E
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHE- 273
Query: 554 SNFRVIHRDLKASNILL----DNELNPKISDFGM-AKLFRKDVDEANTGRIVGTYGYVPP 608
+N+ +H DLK NI+ NEL K+ DFG+ A L K + T GT + P
Sbjct: 274 NNY--VHLDLKPENIMFTTKRSNEL--KLIDFGLTAHLDPKQSVKVTT----GTAEFAAP 325
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + D++S GVL ++S
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLS 351
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 443 LGEGGFGPVYKG--NLPRGQEFAVKRLSA---TSTQGLEEFKNEVSLTARLQHVNLLRVL 497
+GEG FG V++G P AV + TS E+F E + H ++++++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
G TE + +I E L +L +R++ LD + ++ L YL+ + R
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLE---SKR 511
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDV-DEANTGRIVGTYGYVPPEYVKKGIY 616
+HRD+ A N+L+ K+ DFG+++ +A+ G++ ++ PE + +
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL--PIKWMAPESINFRRF 569
Query: 617 SMKYDVYSFGVLLLQII 633
+ DV+ FGV + +I+
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 155
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 156 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 207
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 156
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 157 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 208
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 155
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 156 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 207
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 115 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 170
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 171 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 222
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 155
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 156 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 207
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 435 NNFSSANKLGEG-GFGPVYKGNLPRG----QEFAVKRLSATSTQGLE---EFKNEVSLTA 486
++ S +LGE GFG + + +L R ++ AVK L A + F+ E A
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 487 RLQHVNLLRVLGYCTERDENM------LIYEYLPNKSLD--LYLFDPIRRYVLDWQKRVN 538
L H ++ V Y T E ++ EY+ +L ++ P + ++ +
Sbjct: 68 ALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIE 120
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN--- 595
+I Q L + + +IHRD+K +NIL+ K+ DFG+A+ D N
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAI---ADSGNSVX 174
Query: 596 -TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
T ++GT Y+ PE + + DVYS G +L ++++ +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 45 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 100
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 101 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 156
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 157 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 208
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 87 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 142
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 143 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 194
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 224
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 31 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 86
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 87 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 142
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 143 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 194
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 224
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 88 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 143
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 144 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 195
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY--AAQIV 172
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 227
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 44 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 99
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 100 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 155
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 156 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 207
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 73 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 128
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 129 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 180
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 88 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 143
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 144 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 195
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 32 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 87
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 88 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 143
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 144 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 195
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 225
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 64 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 119
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 120 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 175
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 176 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 227
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 257
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF--AVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
++ N +G G +G V K + +G A K++ + ++ FK E+ + L H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
R+ + + L+ E L + + + V I++ V + Y +
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCHK-- 141
Query: 555 NFRVIHRDLKASNILL--DNELNP-KISDFGMAKLFRKDVDEANTGRI----VGTYGYVP 607
V HRDLK N L D+ +P K+ DFG+A F+ G++ VGT YV
Sbjct: 142 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-------PGKMMRTKVGTPYYVS 193
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P+ V +G+Y + D +S GV++ ++
Sbjct: 194 PQ-VLEGLYGPECDEWSAGVMMYVLLC 219
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 435 NNFSSANKLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL 493
+++ +LG G FG V++ G FA K + E + E+ + L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + +E ++IYE++ L + D + D + V + V +GL ++ E
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHE- 167
Query: 554 SNFRVIHRDLKASNILL----DNELNPKISDFGM-AKLFRKDVDEANTGRIVGTYGYVPP 608
+N+ +H DLK NI+ NEL K+ DFG+ A L K + T GT + P
Sbjct: 168 NNY--VHLDLKPENIMFTTKRSNEL--KLIDFGLTAHLDPKQSVKVTT----GTAEFAAP 219
Query: 609 EYVKKGIYSMKYDVYSFGVLLLQIIS 634
E + D++S GVL ++S
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLS 245
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 73 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 128
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 129 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 180
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 59 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 114
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 115 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 170
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 171 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 222
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 51 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 107 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 162
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 163 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 214
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 244
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K N+F LG+G FG V G+ +A+K L +E + V+ + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V ++ +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL V++RD+K N++LD + + KI+DFG+ K D A GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 172
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K N+F LG+G FG V G+ +A+K L +E + V+ + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V ++ +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL V++RD+K N++LD + + KI+DFG+ K D A GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYL 172
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 434 TNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKR-LSATSTQGLE-EFKNEVSLTARLQH 490
+ + K+G+G FG V+K + GQ+ A+K+ L +G E+ + L+H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 491 VNLLRVLGYCTERDENM--------LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
N++ ++ C + L++++ + L L + + ++ L KRV ++
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGL-LSNVLVKFTLSEIKRV--MQM 132
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR--KDVDEANTGRIV 600
+ GL Y+ +++HRD+KA+N+L+ + K++DFG+A+ F K+ V
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 601 GTYGYVPPE-YVKKGIYSMKYDVYSFGVLLLQI 632
T Y PPE + + Y D++ G ++ ++
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 24/202 (11%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF--AVKRLSATSTQGLEEFKNEVSLTARLQHVNLL 494
++ N +G G +G V K + +G A K++ + ++ FK E+ + L H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
R+ + + L+ E L + + + V I++ V + Y +
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERV---VHKRVFRESDAARIMKDVLSAVAYCHK-- 124
Query: 555 NFRVIHRDLKASNILL--DNELNP-KISDFGMAKLFRKDVDEANTGRI----VGTYGYVP 607
V HRDLK N L D+ +P K+ DFG+A F+ G++ VGT YV
Sbjct: 125 -LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-------PGKMMRTKVGTPYYVS 176
Query: 608 PEYVKKGIYSMKYDVYSFGVLL 629
P+ V +G+Y + D +S GV++
Sbjct: 177 PQ-VLEGLYGPECDEWSAGVMM 197
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K N+F LG+G FG V G+ +A+K L +E + V+ + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V ++ +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL V++RD+K N++LD + + KI+DFG+ K D A GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 172
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 431 KAATNNFSSANKLGEGGFGPVYKGNLPRGQE----FAVKRLS-ATSTQGLEEFKNEVSLT 485
K NF LG G +G V+ G + +A+K L AT Q + ++ +
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 486 ARLQHVN---LLRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
L+H+ L L Y + + + LI +Y+ L +L R + Q V I
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI- 168
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVG 601
+L L+ +I+RD+K NILLD+ + ++DFG++K F D E G
Sbjct: 169 -----VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCG 222
Query: 602 TYGYVPPEYVKKGI--YSMKYDVYSFGVLLLQIIS 634
T Y+ P+ V+ G + D +S GVL+ ++++
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K N+F LG+G FG V G+ +A+K L +E + V+ + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V ++ +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL V++RD+K N++LD + + KI+DFG+ K D A GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYL 172
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K N+F LG+G FG V G+ +A+K L +E + V+ + LQ
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V ++ +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 120
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL V++RD+K N++LD + + KI+DFG+ K D A GT Y+
Sbjct: 121 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYL 175
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 15 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 70
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 71 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 126
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 127 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 178
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 33 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 92
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 93 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFY--AAQIV 146
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 201
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 202 PEIILSKGYNKAVDWWALGVLIYEM 226
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 17 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 72
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 73 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 128
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 129 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 180
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 68 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 123
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 124 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 175
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 15/208 (7%)
Query: 437 FSSANKLGEGGFGPVYKG--NLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNL 493
+++ + +GEG +G V N+ + + A+K++S Q + E+ + +H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+ + + Y+ ++ L+ ++ L + + +GL Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI---VGTYGYVPPEY 610
+ V+HRDLK SN+LL+ + KI DFG+A++ D D +TG + V T Y PE
Sbjct: 146 N---VLHRDLKPSNLLLNTTSDLKICDFGLARV--ADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 611 V--KKGIYSMKYDVYSFGVLLLQIISSK 636
+ KG Y+ D++S G +L +++S++
Sbjct: 201 MLNSKG-YTKSIDIWSVGCILAEMLSNR 227
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 72 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 127
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 128 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 179
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 68 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 123
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 124 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 175
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLE---EFKNEVSLTARLQHVNLLRVLG 498
LG GG V+ +L ++ AVK L A + F+ E A L H ++ V
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV-- 77
Query: 499 YCTERDENM------LIYEYLPNKSLD--LYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL 550
Y T E ++ EY+ +L ++ P + ++ + +I Q L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFS 132
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN----TGRIVGTYGYV 606
+ +IHRD+K +NI++ K+ DFG+A+ D N T ++GT Y+
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYL 186
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE + + DVYS G +L ++++ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
+ N F LG+G FG V G+ +A+K L +E + ++ LQ
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V + +
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSA 121
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL N V++RDLK N++LD + + KI+DFG+ K K D A GT Y+
Sbjct: 122 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYL 177
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
K N+F LG+G FG V G+ +A+K L +E + V+ + LQ
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V ++ +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSA 117
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL V++RD+K N++LD + + KI+DFG+ K D A GT Y+
Sbjct: 118 LEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYL 172
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLE---EFKNEVSLTARLQHVNLLRVLG 498
LG GG V+ +L ++ AVK L A + F+ E A L H ++ V
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV-- 77
Query: 499 YCTERDENM------LIYEYLPNKSLD--LYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL 550
Y T E ++ EY+ +L ++ P + ++ + +I Q L +
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIEVIADACQALNFS 132
Query: 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN----TGRIVGTYGYV 606
+ +IHRD+K +NI++ K+ DFG+A+ D N T ++GT Y+
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI---ADSGNSVTQTAAVIGTAQYL 186
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE + + DVYS G +L ++++ +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 39 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 152
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 207
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAA 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
+ N F LG+G FG V G+ +A+K L +E + ++ LQ
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V + +
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSA 120
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL N V++RDLK N++LD + + KI+DFG+ K K D A GT Y+
Sbjct: 121 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYL 176
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLAGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
+ N F LG+G FG V G+ +A+K L +E + ++ LQ
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V + +
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSA 260
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL N V++RDLK N++LD + + KI+DFG+ K K D A GT Y+
Sbjct: 261 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYL 316
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 25 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 84
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 85 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 138
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 193
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 194 PEIILSKGYNKAVDWWALGVLIYEM 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 435 NNFSSANKLGEG-GFGPVYKGNLPRG----QEFAVKRLSATSTQGLE---EFKNEVSLTA 486
++ S +LGE GFG + + +L R ++ AVK L A + F+ E A
Sbjct: 25 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 84
Query: 487 RLQHVNLLRVLGYCTERDENM------LIYEYLPNKSLD--LYLFDPIRRYVLDWQKRVN 538
L H ++ V Y T E ++ EY+ +L ++ P + ++ +
Sbjct: 85 ALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIE 137
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN--- 595
+I Q L + + +IHRD+K +NI++ K+ DFG+A+ D N
Sbjct: 138 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI---ADSGNSVT 191
Query: 596 -TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
T ++GT Y+ PE + + DVYS G +L ++++ +
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYC 500
LGEG V NL QE+AVK + EV + + Q H N+L ++ +
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
E D L++E + S+ ++ RR+ + + V +++ V L +L N + H
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHIHK--RRHFNELEASV-VVQDVASALDFLH---NKGIAH 134
Query: 561 RDLKASNILLD--NELNP-KISDFGMAKLFR--KDVDEANTGRIV---GTYGYVPPEYV- 611
RDLK NIL + N+++P KI DF + + D +T ++ G+ Y+ PE V
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 612 ----KKGIYSMKYDVYSFGVLLLQIIS 634
+ IY + D++S GV+L ++S
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 435 NNFSSANKLGEG-GFGPVYKGNLPRG----QEFAVKRLSATSTQGLE---EFKNEVSLTA 486
++ S +LGE GFG + + +L R ++ AVK L A + F+ E A
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAA 67
Query: 487 RLQHVNLLRVLGYCTERDENM------LIYEYLPNKSLD--LYLFDPIRRYVLDWQKRVN 538
L H ++ V Y T E ++ EY+ +L ++ P + ++ +
Sbjct: 68 ALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-----MTPKRAIE 120
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN--- 595
+I Q L + + +IHRD+K +NI++ K+ DFG+A+ D N
Sbjct: 121 VIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAI---ADSGNSVT 174
Query: 596 -TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
T ++GT Y+ PE + + DVYS G +L ++++ +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 11/210 (5%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ 489
+ N F LG+G FG V G+ +A+K L +E + ++ LQ
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 490 HVN--LLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
+ L L Y + D + EY L +L R V + +
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL---SRERVFSEDRARFYGAEIVSA 263
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L YL N V++RDLK N++LD + + KI+DFG+ K KD A GT Y+
Sbjct: 264 LDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKTFCGTPEYL 319
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
PE ++ Y D + GV++ +++ +
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 39 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 94
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 95 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 150
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 151 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 202
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 232
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 12 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E P DL+ F R + + R ++E V
Sbjct: 68 FSGVIRLLDWFERPDSFVLILER-PEPVQDLFDFITERGALQEELARSFFWQVLEAV--- 123
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 124 ----RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 175
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 93/214 (43%), Gaps = 39/214 (18%)
Query: 442 KLGEGGFGPVYKGNLPRGQ------EFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
++G G F VYKG E ++L+ + Q FK E LQH N++R
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGLQHPNIVR 89
Query: 496 --------VLGY-CTERDENMLIYEYLPNKSLDLYL--FDPIRRYVL-DWQKRVNIIEGV 543
V G C +L+ E + +L YL F + VL W +++
Sbjct: 90 FYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------ 138
Query: 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
+GL +L + +IHRDLK NI + KI D G+A L R +A ++GT
Sbjct: 139 LKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VIGT 193
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+ PE ++ Y DVY+FG L+ +S+
Sbjct: 194 PEFXAPEXYEEK-YDESVDVYAFGXCXLEXATSE 226
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Hexasaccharide
pdb|3B9D|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Pentasaccharide
pdb|3B9E|A Chain A, Crystal Structure Of Inactive Mutant E315m Chitinase A
From Vibrio Harveyi
Length = 584
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 137/367 (37%), Gaps = 109/367 (29%)
Query: 62 STYQLSISSANQQYFSIFAN------SVRRKNPSIKTLLSI--WNGQNSTYQSILGNKNI 113
+ YQ S A +Y + +++++NP +K + SI W + Y +
Sbjct: 211 AAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDLKIIPSIGGWTLSDPFYDFV------ 264
Query: 114 NPSVLSSMVGDSSHRKSFIESSIRTARLYGF-QGIDLFWLWPNSTD-------------- 158
D +R +F+ S + + + F G+D+ W++P
Sbjct: 265 ----------DKKNRDTFVASVKKFLKTWKFYDGVDIDWMFPGGGGAAADKGDPVNDGPA 314
Query: 159 ----LNSLGILLDEWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYD 214
+ L ++LDE +A ELT ++ V Y E V Y D+++ +++ + YD
Sbjct: 315 YIALMRELRVMLDELEAETGRTYELTSAIGVGYDKI-EDVDY-ADAVQY-MDYIFAMTYD 371
Query: 215 YHMPSKENVTGIHAALYNPS---------------------SNISTDFGIREWLRRGFPA 253
++ NV G ALY S + D GI+ L +G PA
Sbjct: 372 FYG-GWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPA 430
Query: 254 NKLVLGARASG-------------------------------PGITIDGSMGYKFIRAF- 281
NKLVLG G G+ DG + YK I++F
Sbjct: 431 NKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIKSFM 490
Query: 282 -------IQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKA 334
I + YG A +V N T I FD ++ AK +YAK L G +
Sbjct: 491 LGANNTGINGFEYGYDAQAEAPWVWNRST--GELITFDDHRSVLAKGNYAKSLGLAGLFS 548
Query: 335 FQLSNDD 341
+++ D+
Sbjct: 549 WEIDADN 555
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLXGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 59 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 172
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GATWTLCGTPEYLA 227
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
PE + Y+ D ++ GVL+ ++ +
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAA 254
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATST-QGLEEFK-NEVSLTARLQHVNL 493
+ K+GEG +G V+K E A+KR+ +G+ E+ L L+H N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+R+ + L++E+ ++ L Y FD LD + + + + +GL +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFC-DQDLKKY-FDSCNGD-LDPEIVKSFLFQLLKGLGFCHSR 120
Query: 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYV-K 612
+ V+HRDLK N+L++ K+++FG+A+ F V + +V T Y PP+ +
Sbjct: 121 N---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RCYSAEVV-TLWYRPPDVLFG 175
Query: 613 KGIYSMKYDVYSFGVLLLQIISSKR 637
+YS D++S G + ++ ++ R
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+++D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEM 231
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 113/268 (42%), Gaps = 66/268 (24%)
Query: 427 FSDIKAATNNFSSANKLGEGGFGPVY--KGNLPRGQE--FAVKRLSATSTQGLEEFKNEV 482
+ + +N F +K+GEG F VY L G E A+K L TS + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--------HPI 64
Query: 483 SLTARLQHVNLL----RVLG--YCTERDENMLI-YEYLPNKS----LDLYLFDPIRRYVL 531
+ A LQ + + V+G YC ++++++I YL ++S L+ F +R Y+L
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML 124
Query: 532 DWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP-KISDFGMAK----- 585
+ K L+ F ++HRD+K SN L + L + DFG+A+
Sbjct: 125 NLFK-------------ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171
Query: 586 ---LFRKDVDEANTGRI------------------VGTYGYVPPEYVKKGI-YSMKYDVY 623
L + EA R GT G+ PE + K + D++
Sbjct: 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMW 231
Query: 624 SFGVLLLQIISSKRNARYYGTSENLNFL 651
S GV+ L ++S + +Y S++L L
Sbjct: 232 SAGVIFLSLLSGRYP--FYKASDDLTAL 257
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 90 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 189
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 80 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 179
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ QG + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 186
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 187 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ QG + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 186
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ QG + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGY----CTERDENML--IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
+R+ + ++DE L + +Y+P ++ R Y Q I +
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPAT-----VYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 548 LY--LQEYSNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGTYG 604
L+ L +F + HRD+K N+LLD + K+ DFG AK + E N I Y
Sbjct: 131 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSRY- 187
Query: 605 YVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y PE + Y+ DV+S G +L +++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 104 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 203
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 110 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 220
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 103 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 202
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 49/250 (19%)
Query: 408 STPAAEYFDSDTPNLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRL 467
S+P+ E D D S + +F + LG G G + + ++ AVKR+
Sbjct: 3 SSPSLEQDDGDEET------SVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI 56
Query: 468 SATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENM----------LIYEYLPNK 516
+ EV L +H N++R +CTE+D + EY+ K
Sbjct: 57 LPECFSFAD---REVQLLRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQK 111
Query: 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILL-----D 571
+PI +++ T GL +L + ++HRDLK NIL+
Sbjct: 112 DFAHLGLEPI-----------TLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAH 157
Query: 572 NELNPKISDFGMAKLFRKDVDEANTGR---IVGTYGYVPPEYVKKGIY---SMKYDVYSF 625
++ ISDFG+ K + V + R + GT G++ PE + + + D++S
Sbjct: 158 GKIKAMISDFGLCK--KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSA 215
Query: 626 GVLLLQIISS 635
G + +IS
Sbjct: 216 GCVFYYVISE 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ--GLEEFKNEVSLTARLQH 490
+++F + LGEG +G V + P G+ A+K++ L + E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 491 VNLLRVLGYCTER-------DENMLIYEYLPNK-----SLDLYLFDPIRRYVLDWQKRVN 538
N++ + +R +E +I E + S + D I+ ++ + V
Sbjct: 69 ENIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV--DEANT 596
++ G SN VIHRDLK SN+L+++ + K+ DFG+A++ + + T
Sbjct: 127 VLHG-----------SN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 597 GRIVGTYGYV-------PPEYVKKGIYSMKYDVYSFGVLLLQI 632
G+ G YV P + YS DV+S G +L ++
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 37/211 (17%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNLLRVLGY 499
+G G +G V + G AVK+LS S + E+ L ++H N++ +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 500 CTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----IIEGVTQG 546
T P +SL D+YL + ++ QK + +I + +G
Sbjct: 100 FT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V T Y
Sbjct: 148 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YVATRWYR 199
Query: 607 PPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
PE + + Y+ D++S G ++ ++++ +
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEY 553
+R+ + E + YL N LD Y+ + + R + + + + L Q +
Sbjct: 76 VRLRYFFYSSGEKKDVV-YL-NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 554 ------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
+F + HRD+K N+LLD + K+ DFG AK + E N I Y
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSRYYRA 190
Query: 607 PPEYVKKGIYSMKYDVYSFGVLLLQII 633
P Y+ DV+S G +L +++
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 80
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 81 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 133
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 134 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 191
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 192 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGX-V 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 34/210 (16%)
Query: 443 LGEGGFGPVYKG-----NLPRGQEFAVKRLSATSTQGLEEFKN------EVSLTARLQH- 490
LG GGFG VY G NLP A+K + E N EV L ++
Sbjct: 16 LGSGGFGSVYSGIRVSDNLP----VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 71
Query: 491 -VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRV---NIIEGVTQG 546
++R+L + D +LI E + DL+ F R + + R ++E V
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERM-EPVQDLFDFITERGALQEELARSFFWQVLEAV--- 127
Query: 547 LLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605
+ N V+HRD+K NIL+D N K+ DFG L + V GT Y
Sbjct: 128 ----RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV----YTDFDGTRVY 179
Query: 606 VPPEYVKKGIYSMK-YDVYSFGVLLLQIIS 634
PPE+++ Y + V+S G+LL ++
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 94
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 95 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 147
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 148 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 205
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 236
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 88 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 198
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 199 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 87
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 88 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 140
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 198
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG-----------LE 476
+++ A + ++ + G +G V G G A+KR+ T + G +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 477 EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL--DLYLFDPIRRYVLDWQ 534
E+ L H N+L + +E + YL + + DL +R V+ Q
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 535 KRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
+ + GL L E V+HRDL NILL + + I DF +A R+D +A
Sbjct: 135 HIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLA---REDTADA 188
Query: 595 NTGRIVGTYGYVPPEYVK--KGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645
N V Y PE V KG ++ D++S G ++ ++ + R A + G++
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKG-FTKLVDMWSAGCVMAEMFN--RKALFRGST 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 83
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 84 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 136
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 137 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 194
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 186
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 103
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 104 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 156
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 214
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 215 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 245
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 99/233 (42%), Gaps = 24/233 (10%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG-----------LE 476
+++ A + ++ + G +G V G G A+KR+ T + G +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 477 EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL--DLYLFDPIRRYVLDWQ 534
E+ L H N+L + +E + YL + + DL +R V+ Q
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 535 KRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594
+ + GL L E V+HRDL NILL + + I DF +A R+D +A
Sbjct: 135 HIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLA---REDTADA 188
Query: 595 NTGRIVGTYGYVPPEYVK--KGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645
N V Y PE V KG ++ D++S G ++ ++ + R A + G++
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKG-FTKLVDMWSAGCVMAEMFN--RKALFRGST 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 186
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 90 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 189
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 76
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 77 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 129
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 130 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 187
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 218
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 111
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 112 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 164
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 222
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 223 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 109
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 110 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 162
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 220
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 221 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 251
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 79
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 80 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 132
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 133 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSXICSR 190
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 191 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 221
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 96 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 195
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 80 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ G V
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAG-FV 179
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3B8S|B Chain B, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3ARO|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure
pdb|3ARP|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Dequalinium
pdb|3ARQ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Idarubicin
pdb|3ARR|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Pentoxifylline
pdb|3ARV|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Sanguinarine
pdb|3ARW|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Chelerythrine
pdb|3ARX|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Propentofylline
pdb|3ARY|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
pdb|3ARZ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
Length = 584
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 136/367 (37%), Gaps = 109/367 (29%)
Query: 62 STYQLSISSANQQYFSIFAN------SVRRKNPSIKTLLSI--WNGQNSTYQSILGNKNI 113
+ YQ S A +Y + +++++NP +K + SI W + Y +
Sbjct: 211 AAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDLKIIPSIGGWTLSDPFYDFV------ 264
Query: 114 NPSVLSSMVGDSSHRKSFIESSIRTARLYGF-QGIDLFWLWPNSTD-------------- 158
D +R +F+ S + + + F G+D+ W +P
Sbjct: 265 ----------DKKNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGGAAADKGDPVNDGPA 314
Query: 159 ----LNSLGILLDEWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYD 214
+ L ++LDE +A ELT ++ V Y E V Y D+++ +++ + YD
Sbjct: 315 YIALMRELRVMLDELEAETGRTYELTSAIGVGYDKI-EDVDY-ADAVQY-MDYIFAMTYD 371
Query: 215 YHMPSKENVTGIHAALYNPS---------------------SNISTDFGIREWLRRGFPA 253
++ NV G ALY S + D GI+ L +G PA
Sbjct: 372 FYG-GWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPA 430
Query: 254 NKLVLGARASG-------------------------------PGITIDGSMGYKFIRAF- 281
NKLVLG G G+ DG + YK I++F
Sbjct: 431 NKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIKSFM 490
Query: 282 -------IQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKA 334
I + YG A +V N T I FD ++ AK +YAK L G +
Sbjct: 491 LGANNTGINGFEYGYDAQAEAPWVWNRST--GELITFDDHRSVLAKGNYAKSLGLAGLFS 548
Query: 335 FQLSNDD 341
+++ D+
Sbjct: 549 WEIDADN 555
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 443 LGEGGFGPV-YKGNLPRGQEFAVKRLSA-TSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500
+G GGF V ++ G+ A+K + T L K E+ L+H ++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL--QEYSNFRV 558
++ ++ EY P L Y+ R + + + RV + + + Y+ Q Y+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRV-VFRQIVSAVAYVHSQGYA---- 130
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYS 617
HRDLK N+L D K+ DFG+ + + D + G+ Y PE ++ K
Sbjct: 131 -HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 618 MKYDVYSFGVLL 629
+ DV+S G+LL
Sbjct: 189 SEADVWSMGILL 200
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 154
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 155 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 207
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 208 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 265
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 266 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 296
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT Y+
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEYLA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS 634
P + Y+ D ++ GVL+ ++ +
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAA 233
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 89 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 188
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 434 TNNFSSANKLGEGGFGPVYKGNLPRG--QEFAVKRLSATSTQGLEEFKNEVSLTARLQHV 491
T+ + +G G + V K + + EFAVK + + EE + L QH
Sbjct: 21 TDGYEVKEDIGVGSYS-VCKRCIHKATNMEFAVKIIDKSKRDPTEEIE---ILLRYGQHP 76
Query: 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ 551
N++ + + ++ E + L L +R+ ++ ++ +T+ + YL
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGEL---LDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 552 EYSNFRVIHRDLKASNIL-LDNELNP---KISDFGMAKLFRKDVDEANTGRIVG---TYG 604
V+HRDLK SNIL +D NP +I DFG AK R A G ++ T
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-----AENGLLMTPCYTAN 185
Query: 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
+V PE +++ Y D++S GVLL +++
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTMLT 215
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ G V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAG-FV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIRRYVLD-WQKRVNIIEGVTQGLL 548
+ +L T P +SL D+YL + L+ K + + Q L+
Sbjct: 80 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI 127
Query: 549 Y-----LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTY 603
Y L+ + +IHRDLK SN+ ++ + KI DFG+A + D+ TG V T
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YVATR 182
Query: 604 GYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 91 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 190
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 82 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 129
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 130 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 181
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 88
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 89 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 141
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 142 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 199
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 230
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 113
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 114 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 166
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 167 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 224
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQII 633
Y Y PE + Y+ DV+S G +L +++
Sbjct: 225 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELL 255
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 81 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 180
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ G V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMAG-FV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 86 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 185
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 80 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 127
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 128 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 179
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 81 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 128
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 129 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 180
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 181 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 90 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 189
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 96 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 195
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 96 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 143
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 144 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 195
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 196 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 89 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTG-YV 188
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 89 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 188
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 83 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 130
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 131 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 182
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 183 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 86 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 185
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 95 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 142
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 194
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNL 493
+++ +G G FG VY+ L G+ A+K++ + FKN E+ + +L H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNI 75
Query: 494 LRVLGY----CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
+R+ + ++DE L N LD Y+ + + R + + + + L
Sbjct: 76 VRLRYFFYSSGEKKDEVYL------NLVLD-YVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 550 LQEY------SNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGT 602
Q + +F + HRD+K N+LLD + K+ DFG AK + E N I
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--GEPNVSYICSR 186
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
Y P Y+ DV+S G +L +++
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELL 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 86 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 185
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 6/141 (4%)
Query: 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE 502
+G+G FG VY G + + + L+ FK EV + +H N++ +G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 503 RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRD 562
+I ++L + D + VLD K I + + +G+ YL ++H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 563 LKASNILLDNELNPKISDFGM 583
LK+ N+ DN I+DFG+
Sbjct: 156 LKSKNVFYDNG-KVVITDFGL 175
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 104 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 203
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 103 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 150
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 151 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 202
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 203 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 40/223 (17%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ--GLEEFKNEVSLTARLQH 490
+++F + LGEG +G V + P G+ A+K++ L + E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 491 VNLLRVLGYCTER-------DENMLIYEYLPNK-----SLDLYLFDPIRRYVLDWQKRVN 538
N++ + +R +E +I E + S + D I+ ++ + V
Sbjct: 69 ENIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV------- 591
++ G SN VIHRDLK SN+L+++ + K+ DFG+A++ +
Sbjct: 127 VLHG-----------SN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 592 -DEANTGRIVGTYGYVPPE-YVKKGIYSMKYDVYSFGVLLLQI 632
++ V T Y PE + YS DV+S G +L ++
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 40/223 (17%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ--GLEEFKNEVSLTARLQH 490
+++F + LGEG +G V + P G+ A+K++ L + E+ + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 491 VNLLRVLGYCTER-------DENMLIYEYLPNK-----SLDLYLFDPIRRYVLDWQKRVN 538
N++ + +R +E +I E + S + D I+ ++ + V
Sbjct: 69 ENIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 539 IIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV--DEANT 596
++ G SN VIHRDLK SN+L+++ + K+ DFG+A++ + + T
Sbjct: 127 VLHG-----------SN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT 173
Query: 597 GRIVGTYGYV-------PPEYVKKGIYSMKYDVYSFGVLLLQI 632
G+ G +V P + YS DV+S G +L ++
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 92/164 (56%), Gaps = 22/164 (13%)
Query: 475 LEEFKNEVSLTARLQHVNLLRVLGYCTERDENML--IYEYLPNKSLDLYLFDPIRRYVLD 532
+E+ E+++ +L H N+++++ + +E+ L ++E L N+ + + P + + +
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFE-LVNQGPVMEV--PTLKPLSE 136
Query: 533 WQKRV---NIIEGVTQGLLYLQEYSNF-RVIHRDLKASNILLDNELNPKISDFGMAKLFR 588
Q R ++I+G+ EY ++ ++IHRD+K SN+L+ + + KI+DFG++ F+
Sbjct: 137 DQARFYFQDLIKGI--------EYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 589 KDVDEANTGRIVGTYGYVPPEYVK--KGIYSMK-YDVYSFGVLL 629
+A VGT ++ PE + + I+S K DV++ GV L
Sbjct: 189 G--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 107 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 206
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 89 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 136
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 137 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTG-YV 188
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 189 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 558 VIHRDLKASNIL-LDNELNP---KISDFGMAKLFRKDVDEANTGRIVG---TYGYVPPEY 610
V+HRDLK SNIL +D NP +I DFG AK R A G ++ T +V PE
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-----AENGLLMTPCYTANFVAPEV 196
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+K+ Y D++S G+LL +++
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 443 LGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKN--EVSLTARLQHVNLLRVLGY 499
+G G +G V R Q+ AVK+LS + + E+ L L+H N++ +L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 500 CTERDENMLIYE-YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
T E YL + L + ++ L + ++ + +GL Y+ +
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---I 144
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI-YS 617
IHRDLK SN+ ++ + +I DFG+A + DE TG V T Y PE + + Y+
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLA----RQADEEMTG-YVATRWYRAPEIMLNWMHYN 199
Query: 618 MKYDVYSFGVLLLQIISSK 636
D++S G ++ +++ K
Sbjct: 200 QTVDIWSVGCIMAELLQGK 218
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 95 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 142
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 143 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTG-YV 194
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 195 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure Of Mutant
W275g
pdb|3ART|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Dequalinium
pdb|3ARU|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Pentoxifylline
pdb|3AS0|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Sanguinarine
pdb|3AS1|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Chelerythrine
pdb|3AS2|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Propentofylline
pdb|3AS3|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With 2-(Imidazolin-
2-Yl)-5-Isothiocyanatobenzofuran
Length = 584
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 136/367 (37%), Gaps = 109/367 (29%)
Query: 62 STYQLSISSANQQYFSIFAN------SVRRKNPSIKTLLSIWNGQNST--YQSILGNKNI 113
+ YQ S A +Y + +++++NP +K + SI G S Y +
Sbjct: 211 AAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDLKIIPSIGGGTLSDPFYDFV------ 264
Query: 114 NPSVLSSMVGDSSHRKSFIESSIRTARLYGF-QGIDLFWLWPNSTD-------------- 158
D +R +F+ S + + + F G+D+ W +P
Sbjct: 265 ----------DKKNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGGAAADKGDPVNDGPA 314
Query: 159 ----LNSLGILLDEWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYD 214
+ L ++LDE +A ELT ++ V Y E V Y D+++ +++ + YD
Sbjct: 315 YIALMRELRVMLDELEAETGRTYELTSAIGVGYDKI-EDVDY-ADAVQY-MDYIFAMTYD 371
Query: 215 YHMPSKENVTGIHAALYNPS---------------------SNISTDFGIREWLRRGFPA 253
++ NV G ALY S + D GI+ L +G PA
Sbjct: 372 FYG-GWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPA 430
Query: 254 NKLVLGARASG-------------------------------PGITIDGSMGYKFIRAF- 281
NKLVLG G G+ DG + YK I++F
Sbjct: 431 NKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVIDYKGIKSFM 490
Query: 282 -------IQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKA 334
I + YG A +V N T I FD ++ AK +YAK L G +
Sbjct: 491 LGANNTGINGFEYGYDAQAEAPWVWNRST--GELITFDDHRSVLAKGNYAKSLGLAGLFS 548
Query: 335 FQLSNDD 341
+++ D+
Sbjct: 549 WEIDADN 555
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 558 VIHRDLKASNIL-LDNELNP---KISDFGMAKLFRKDVDEANTGRIVG---TYGYVPPEY 610
V+HRDLK SNIL +D NP +I DFG AK R A G ++ T +V PE
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-----AENGLLMTPCYTANFVAPEV 196
Query: 611 VKKGIYSMKYDVYSFGVLLLQIIS 634
+K+ Y D++S G+LL +++
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 428 SDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEF-AVKRLSATSTQGLEEFKNEVS--- 483
S+ A ++F +G+G FG V + F AVK L + +E K+ +S
Sbjct: 31 SNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 484 -LTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEG 542
L ++H L+ + D+ + +Y+ L +L R L+ + R E
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAE- 147
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE-ANTGRIVG 601
+ L YL + +++RDLK NILLD++ + ++DFG+ K ++++ + T G
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCG 201
Query: 602 TYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633
T Y+ PE + K Y D + G +L +++
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 432 AATNNFSSANKLGEGGFGPVY-KGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH 490
A + F LG G FG V + G +A+K L L++ ++ ++ LQ
Sbjct: 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 491 VNL--LRVLGYCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
VN L L + + + N+ ++ EY+ + F +RR + Q +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFY--AAQIV 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607
L + + +I+RDLK N+L+D + +++DFG AK + T + GT +
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXLCGTPEALA 206
Query: 608 PEYVKKGIYSMKYDVYSFGVLLLQI 632
PE + Y+ D ++ GVL+ ++
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEM 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 104 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 151
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ G V
Sbjct: 152 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXGX-V 203
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 204 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 91 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A R DE TG V
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM-TG-YV 190
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 91 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A R DE TG V
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM-TG-YV 190
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 91 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 138
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A R DE TG V
Sbjct: 139 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEM-TG-YV 190
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 191 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 90 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 137
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 138 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLA----RHTDDEMTG-YV 189
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 86 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 133
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ TG V
Sbjct: 134 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLA----RHTDDEMTG-YV 185
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 186 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 443 LGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKN--EVSLTARLQHVNLLRVLGY 499
+G G +G V R Q+ AVK+LS + + E+ L L+H N++ +L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 500 CTERDENMLIYE-YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
T E YL + L + ++ L + ++ + +GL Y+ +
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG---I 152
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI-YS 617
IHRDLK SN+ ++ + +I DFG+A + DE TG V T Y PE + + Y+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTG-YVATRWYRAPEIMLNWMHYN 207
Query: 618 MKYDVYSFGVLLLQIISSK 636
D++S G ++ +++ K
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI D+G+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT 501
LGEG F K + Q FAVK +S + K +L H N++++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHEVFH 76
Query: 502 ERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVN-IIEGVTQGLLYLQEYSNFRVIH 560
++ L+ E L L F+ I++ + + I+ + + ++ + V+H
Sbjct: 77 DQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHDVG---VVH 129
Query: 561 RDLKASNILLDNE---LNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYS 617
RDLK N+L +E L KI DFG A+L K D T Y PE + + Y
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARL--KPPDNQPLKTPCFTLHYAAPELLNQNGYD 187
Query: 618 MKYDVYSFGVLLLQIISSK 636
D++S GV+L ++S +
Sbjct: 188 ESCDLWSLGVILYTMLSGQ 206
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 442 KLGEGGFGPVYKGNLPRGQE---FAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLG 498
K+G G +G VYK G++ +A+K++ T E++L L+H N++ +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM--SACREIALLRELKHPNVISLQK 85
Query: 499 -YCTERDENM-LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY-----LQ 551
+ + D + L+++Y + DL+ R +K V + G+ + LLY +
Sbjct: 86 VFLSHADRKVWLLFDYAEH---DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 552 EYSNFRVIHRDLKASNILLDNELNP-----KISDFGMAKLFRKDVDE-ANTGRIVGTYGY 605
V+HRDLK +NIL+ E P KI+D G A+LF + A+ +V T+ Y
Sbjct: 143 YLHANWVLHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 606 VPPEYVKKG-IYSMKYDVYSFGVLLLQIISSK 636
PE + Y+ D+++ G + ++++S+
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 107 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 154
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+A + D+ G V
Sbjct: 155 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMXG-YV 206
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 207 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 15/94 (15%)
Query: 543 VTQGLLYLQEYSNFRVIHRDLKASNIL-LDNELNP---KISDFGMAKLFRKDVDEANTGR 598
+T+ + YL V+HRDLK SNIL +D NP +I DFG AK R A G
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-----AENGL 176
Query: 599 IVG---TYGYVPPEYVKKGIYSMKYDVYSFGVLL 629
+ T +V PE +++ Y D++S GVLL
Sbjct: 177 LXTPCYTANFVAPEVLERQGYDAACDIWSLGVLL 210
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 443 LGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKN--EVSLTARLQHVNLLRVLGY 499
+G G +G V R Q+ AVK+LS + + E+ L L+H N++ +L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 500 CTERDENMLIYE-YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRV 558
T E YL + L + ++ L + ++ + +GL Y+ +
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG---I 152
Query: 559 IHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI-YS 617
IHRDLK SN+ ++ + +I DFG+A + DE TG V T Y PE + + Y+
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTG-YVATRWYRAPEIMLNWMHYN 207
Query: 618 MKYDVYSFGVLLLQIISSK 636
D++S G ++ +++ K
Sbjct: 208 QTVDIWSVGCIMAELLQGK 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DF +A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 42/222 (18%)
Query: 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATST--------QGLEEFKNEVSL 484
+ +S+ + LG G FG V+ + + +E VK + L + E+++
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLF--------DPIRRYVLDWQKR 536
+R++H N+++VL + L+ E LDL+ F +P+ Y+ +++
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEK-HGSGLDLFAFIDRHPRLDEPLASYI--FRQL 139
Query: 537 VNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596
V+ + G L L++ +IHRD+K NI++ + K+ DFG A +
Sbjct: 140 VSAV-----GYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER------- 182
Query: 597 GRI----VGTYGYVPPEYVKKGIY-SMKYDVYSFGVLLLQII 633
G++ GT Y PE + Y + +++S GV L ++
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans
Wl-12
Length = 419
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 71/314 (22%)
Query: 81 NSVRRKNPSIKTLLSI--WNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRT 138
N +++ NP++KT++S+ W N S + ++ R+ F S++
Sbjct: 114 NKLKQTNPNLKTIISVGGWTWSNR---------------FSDVAATAATREVFANSAVDF 158
Query: 139 ARLYGFQGIDLFWLWPNSTDLN----------SLGILLDEWK-----ASASDQPELTLSM 183
R Y F G+DL W +P S L+ + +LL + + A A D + L++
Sbjct: 159 LRKYNFDGVDLDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTI 218
Query: 184 AVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAAL-YNPSSNIS---- 238
A S T+ + + + ++W +++ YD++ + + ++ +A L Y+P+++ +
Sbjct: 219 ASGASATY-AANTELAKIAAIVDWINIMTYDFNG-AWQKISAHNAPLNYDPAASAAGVPD 276
Query: 239 -----TDFGIREWLRRGFPANKLVLGARASGPG--------------ITIDGSMG----- 274
G + L G PA KLVLG G G T S+G
Sbjct: 277 ANTFNVAAGAQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVGTWEAG 336
Query: 275 ----YKFIRAFIQNYGYGAAPVYNASYVVNLF--TSGATWINFDGVETIKAKISYAKEKN 328
Y +I GY +N + V S +I++D E++ K +Y K K
Sbjct: 337 SFDFYDLEANYINKNGY--TRYWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKG 394
Query: 329 LLGYKAFQLSNDDN 342
L G ++LS D N
Sbjct: 395 LGGAMFWELSGDRN 408
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
pdb|1E6P|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6P|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6N|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
Length = 499
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 39 FPLSDINSA---LFTHLICAFAEVDS---STYQLSISSANQQYFSIFANSVRRKNPSIKT 92
FP+S+I A TH+ +F +++S + + + A + +++ NPS++
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 93 LLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWL 152
+ SI Y + LG + N + V + R F +S +R + YGF G+D+ W
Sbjct: 91 MFSI---GGWYYSNDLGVSHAN---YVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWQ 144
Query: 153 WPNSTDLNSLGILLDEWKASASDQP----------ELTLSMA------VRYSPTHETVSY 196
+P + +++ L E + + Q +LT++ A RY +
Sbjct: 145 YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVA 204
Query: 197 PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIRE----W----LR 248
P+D + +L+ YD P E VT AAL+ ++ + +RE W L
Sbjct: 205 PLD-------YINLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELT 256
Query: 249 RGFPA 253
R FP+
Sbjct: 257 RAFPS 261
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 33/215 (15%)
Query: 437 FSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLR 495
+ +G G +G V R G + A+K+L F++E+ + + LL+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL-------YRPFQSELFAKRAYRELRLLK 79
Query: 496 VLGYCTERDENM--LIYEYLPNKSLD----LYLFDPIRRYVL-DWQKRVNIIEGVTQGLL 548
+ R EN+ L+ + P+++LD YL P L K + E Q L+
Sbjct: 80 HM-----RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLV 134
Query: 549 YLQEYSNFR------VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGT 602
Y Q R +IHRDLK N+ ++ + KI DFG+A + D G +V T
Sbjct: 135 Y-QMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA----RQADSEMXGXVV-T 188
Query: 603 YGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
Y PE + + Y+ D++S G ++ ++I+ K
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGB|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGG|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
pdb|1OGG|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
Length = 499
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 39 FPLSDINSA---LFTHLICAFAEVDS---STYQLSISSANQQYFSIFANSVRRKNPSIKT 92
FP+S+I A TH+ +F +++S + + + A + +++ NPS++
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 93 LLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWL 152
+ SI Y + LG + N + V + R F +S +R + YGF G+D+ W
Sbjct: 91 MFSI---GGWYYSNDLGVSHAN---YVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWE 144
Query: 153 WPNSTDLNSLGILLDEWKASASDQP----------ELTLSMA------VRYSPTHETVSY 196
+P + +++ L E + + Q +LT++ A RY +
Sbjct: 145 YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVA 204
Query: 197 PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIRE----W----LR 248
P+D + +L+ YD P E VT AAL+ ++ + +RE W L
Sbjct: 205 PLD-------YINLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELT 256
Query: 249 RGFPA 253
R FP+
Sbjct: 257 RAFPS 261
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0G|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0I|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
pdb|1H0I|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
Length = 499
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 39 FPLSDINSA---LFTHLICAFAEVDS---STYQLSISSANQQYFSIFANSVRRKNPSIKT 92
FP+S+I A TH+ +F +++S + + + A + +++ NPS++
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 93 LLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWL 152
+ SI Y + LG + N + V + R F +S +R + YGF G+D+ W
Sbjct: 91 MFSI---GGWYYSNDLGVSHAN---YVNAVKTPASRTKFAQSCVRIMKDYGFDGVDIDWE 144
Query: 153 WPNSTDLNSLGILLDEWKASASDQP----------ELTLSMA------VRYSPTHETVSY 196
+P + +++ L E + + Q +LT++ A RY +
Sbjct: 145 YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVA 204
Query: 197 PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIRE----W----LR 248
P+D + +L+ YD P E VT AAL+ ++ + +RE W L
Sbjct: 205 PLD-------YINLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELT 256
Query: 249 RGFPA 253
R FP+
Sbjct: 257 RAFPS 261
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens
pdb|1E15|B Chain B, Chitinase B From Serratia Marcescens
pdb|1E6R|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1E6R|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1GPF|A Chain A, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1GPF|B Chain B, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1UR8|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR8|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1W1P|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1P|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1T|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1T|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1V|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1V|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1Y|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1W1Y|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1O6I|A Chain A, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4.
pdb|1O6I|B Chain B, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4
Length = 499
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 39 FPLSDINSA---LFTHLICAFAEVDS---STYQLSISSANQQYFSIFANSVRRKNPSIKT 92
FP+S+I A TH+ +F +++S + + + A + +++ NPS++
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 93 LLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWL 152
+ SI Y + LG + N + V + R F +S +R + YGF G+D+ W
Sbjct: 91 MFSI---GGWYYSNDLGVSHAN---YVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWE 144
Query: 153 WPNSTDLNSLGILLDEWKASASDQP----------ELTLSMA------VRYSPTHETVSY 196
+P + +++ L E + + Q +LT++ A RY +
Sbjct: 145 YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVA 204
Query: 197 PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIRE----W----LR 248
P+D + +L+ YD P E VT AAL+ ++ + +RE W L
Sbjct: 205 PLD-------YINLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELT 256
Query: 249 RGFPA 253
R FP+
Sbjct: 257 RAFPS 261
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
pdb|1E6Z|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
Length = 498
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 39 FPLSDINSA---LFTHLICAFAEVDS---STYQLSISSANQQYFSIFANSVRRKNPSIKT 92
FP+S+I A TH+ +F +++S + + + A + +++ NPS++
Sbjct: 30 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 89
Query: 93 LLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWL 152
+ SI Y + LG + N + V + R F +S +R + YGF G+D+ W
Sbjct: 90 MFSI---GGWYYSNDLGVSHAN---YVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWE 143
Query: 153 WPNSTDLNSLGILLDEWKASASDQP----------ELTLSMA------VRYSPTHETVSY 196
+P + +++ L E + + Q +LT++ A RY +
Sbjct: 144 YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVA 203
Query: 197 PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIRE----W----LR 248
P+D + +L+ YD P E VT AAL+ ++ + +RE W L
Sbjct: 204 PLDYI-------NLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELT 255
Query: 249 RGFPA 253
R FP+
Sbjct: 256 RAFPS 260
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 443 LGEGGFGPVYK----GNLPRGQEFAVKRLSAT----STQGLEEFKNEVSLTARLQHVNLL 494
LG+GG+G V++ G+ FA+K L + + K E ++ ++H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ + LI EYL L + L R + + ++ L +L +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+I+RDLK NI+L+++ + K++DFG+ K D +T GT Y+ PE + +
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPEILMRS 196
Query: 615 IYSMKYDVYSFGVLLLQIISS 635
++ D +S G L+ +++
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR9|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
Length = 499
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 44/245 (17%)
Query: 39 FPLSDINSA---LFTHLICAFAEVDS---STYQLSISSANQQYFSIFANSVRRKNPSIKT 92
FP+S+I A TH+ +F +++S + + + A + +++ NPS++
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 93 LLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWL 152
+ SI Y + LG + N + V + R F +S +R + YGF G+D+ W
Sbjct: 91 MFSI---GGWYYSNDLGVSHAN---YVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWE 144
Query: 153 WPNSTDLNSLGILLDEWKASASDQP----------ELTLSMA------VRYSPTHETVSY 196
+P + +++ L E + + Q +LT++ A RY +
Sbjct: 145 YPQAAEVDGFIAALQEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVA 204
Query: 197 PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIRE----W----LR 248
P+D + +L+ YD P E VT AAL+ ++ + +RE W L
Sbjct: 205 PLD-------YINLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWSWEELT 256
Query: 249 RGFPA 253
R FP+
Sbjct: 257 RAFPS 261
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 443 LGEGGFGPVYK----GNLPRGQEFAVKRLSAT----STQGLEEFKNEVSLTARLQHVNLL 494
LG+GG+G V++ G+ FA+K L + + K E ++ ++H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 495 RVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554
++ + LI EYL L + L R + + ++ L +L +
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614
+I+RDLK NI+L+++ + K++DFG+ K D T GT Y+ PE + +
Sbjct: 142 ---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 615 IYSMKYDVYSFGVLLLQIISS 635
++ D +S G L+ +++
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA-KLFRKDVDEANTGRIVGTYGY 605
+L L + +IHRD+K N+LLD + K++DFG K+ + +T VGT Y
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA--VGTPDY 241
Query: 606 VPPEYVK----KGIYSMKYDVYSFGVLLLQII 633
+ PE +K G Y + D +S GV L +++
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI FG+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI D G+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 101/214 (47%), Gaps = 30/214 (14%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV----- 496
LG GG G V+ + + A+K++ T Q ++ E+ + RL H N+++V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 497 ---------LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL 547
+G TE + ++ EY+ ++ P+ L+ R+ + + + +GL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL----LEEHARLFMYQ-LLRGL 133
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGMAKLFRKDVDEANTGR----IVGT 602
Y+ + V+HRDLK +N+ ++ E L KI DFG+A++ D ++ G +V
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM--DPHYSHKGHLSEGLVTK 188
Query: 603 YGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSK 636
+ P + Y+ D+++ G + ++++ K
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI DFG+ + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLC----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI D G+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA-KLFRKDVDEANTGRIVGTYGY 605
+L L + IHRD+K N+LLD + K++DFG K+ ++ + +T VGT Y
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDY 240
Query: 606 VPPEYVK----KGIYSMKYDVYSFGVLLLQII 633
+ PE +K G Y + D +S GV L +++
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNL 493
+ + + +G G +G V + G AVK+LS S + E+ L ++H N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 494 LRVLGYCTERDENMLIYEYLPNKSL----DLYLFDPIR----RYVLDWQKRVN-----II 540
+ +L T P +SL D+YL + ++ QK + +I
Sbjct: 84 IGLLDVFT------------PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI 131
Query: 541 EGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600
+ +GL Y+ +IHRDLK SN+ ++ + KI D G+A + D+ TG V
Sbjct: 132 YQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLA----RHTDDEMTG-YV 183
Query: 601 GTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
T Y PE + + Y+ D++S G ++ ++++ +
Sbjct: 184 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA-KLFRKDVDEANTGRIVGTYGY 605
+L L + IHRD+K N+LLD + K++DFG K+ ++ + +T VGT Y
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDY 235
Query: 606 VPPEYVK----KGIYSMKYDVYSFGVLLLQII 633
+ PE +K G Y + D +S GV L +++
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 94/243 (38%), Gaps = 51/243 (20%)
Query: 144 FQGIDLFWLWPNS------------TDLNSLGILLDEWKA-----SASDQPELTLSMAVR 186
F GID+ W WP + D + LL E++ +++ + LS +
Sbjct: 175 FDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLP 234
Query: 187 YSPTH-ETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYN-------PSSNIS 238
+P + + + K+L++ + YD H +TG A LY+ PS S
Sbjct: 235 ANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFS 294
Query: 239 TDFGIREWLRRGFPANKLVLGARASGPGIT-----------IDGSMG--------YKFIR 279
D ++++L G +L LG A G G T DG+ G Y ++
Sbjct: 295 ADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDGAPGTYETANEDYDKLK 354
Query: 280 AFIQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSN 339
++ Y+A+ G W ++D + T K K Y K L G ++LS
Sbjct: 355 TLGTDH-------YDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSG 407
Query: 340 DDN 342
D N
Sbjct: 408 DRN 410
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA-KLFRKDVDEANTGRIVGTYGY 605
+L L + IHRD+K N+LLD + K++DFG K+ ++ + +T VGT Y
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA--VGTPDY 240
Query: 606 VPPEYVK----KGIYSMKYDVYSFGVLLLQII 633
+ PE +K G Y + D +S GV L +++
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 556 FRVIHRDLKASNILLDNELNP--KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+V HRDLK N LLD P KI DFG +K V + VGT Y+ PE + K
Sbjct: 133 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLK 189
Query: 614 GIYSMKY-DVYSFGVLL 629
Y K DV+S GV L
Sbjct: 190 KEYDGKVADVWSCGVTL 206
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 556 FRVIHRDLKASNILLDNELNP--KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+V HRDLK N LLD P KI DFG +K V + VGT Y+ PE + K
Sbjct: 134 MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 614 GIYSMKY-DVYSFGVLL 629
Y K DV+S GV L
Sbjct: 191 KEYDGKVADVWSCGVTL 207
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKN-EVSLTARLQHVNLLR 495
+++ +G G FG V++ L E A+K++ + FKN E+ + ++H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVD 96
Query: 496 VLGY----CTERDENM--LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGV--TQGL 547
+ + ++DE L+ EY+P ++ R Y Q ++ + Q L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 548 LYLQEYSNFRVIHRDLKASNILLDNELNP-KISDFGMAKLFRKDVDEANTGRIVGTYGYV 606
L + + HRD+K N+LLD K+ DFG AK+ E N I Y Y
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVSXICSRY-YR 208
Query: 607 PPEYVKKGI-YSMKYDVYSFGVLLLQIISSK 636
PE + Y+ D++S G ++ +++ +
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGY 499
KL E G ++KG +G + VK L ST+ +F E H N+L VLG
Sbjct: 17 KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 500 C--TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557
C LI ++P SL L + +V+D + V + +G+ +L
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLI 134
Query: 558 VIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYS 617
H L + ++++D ++ +IS + F+ + GR+ +V PE ++K
Sbjct: 135 PRHA-LNSRSVMIDEDMTARISMADVKFSFQ------SPGRMYAP-AWVAPEALQKKPED 186
Query: 618 MKY---DVYSFGVLLLQIIS 634
D++SF VLL ++++
Sbjct: 187 TNRRSADMWSFAVLLWELVT 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 556 FRVIHRDLKASNILLDNELNP--KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK 613
+V HRDLK N LLD P KI+DFG +K V + VGT Y+ PE + K
Sbjct: 134 MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLK 190
Query: 614 GIYSMKY-DVYSFGVLL 629
Y K DV+S GV L
Sbjct: 191 KEYDGKVADVWSCGVTL 207
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 555 NFRVIHRDLKASNILLDNELNP--KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK 612
+ ++ HRDLK N LLD P KI DFG +K V + VGT Y+ PE +
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 613 KGIYSMKY-DVYSFGVLL 629
+ Y K DV+S GV L
Sbjct: 191 RQEYDGKIADVWSCGVTL 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 474 GLEEFKNEVSLTARLQHVNLLRVLG--YCTERDENMLIYEYLPNKSLDLYLFDPIRRYVL 531
G K E+ L RL+H N+++++ Y E+ + ++ EY ++ P +R+ +
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV 108
Query: 532 DWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591
Q + + GL YL ++H+D+K N+LL KIS G+A+
Sbjct: 109 -CQAHGYFCQ-LIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 592 DEANTGRIVGTYGYVPPEYVKKGIYS---MKYDVYSFGVLLLQIISS 635
+ G+ + PPE + G+ + K D++S GV L I +
Sbjct: 164 ADDTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 18/155 (11%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYC 500
L EGGF VY+ ++ G+E+A+KRL + + EV +L H N+++ +C
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FC 92
Query: 501 -----------TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY 549
T + E +L+ E + ++ +L R L + I + + +
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 550 LQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584
+ +IHRDLK N+LL N+ K+ DFG A
Sbjct: 152 MHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 98/217 (45%), Gaps = 32/217 (14%)
Query: 435 NNFS--SANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHV 491
NNF ++ +LG G F V + + GQE+A K L +G ++ + E+ L +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-RG-QDCRAEI-----LHEI 79
Query: 492 NLLRVLGYCTE----------RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541
+L + C E +LI EY + L P ++ + +I+
Sbjct: 80 AVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIK 138
Query: 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP----KISDFGMAKLFRKDVDEANTG 597
+ +G+ YL + + ++H DLK NILL + + P KI DFGM+ RK
Sbjct: 139 QILEGVYYLHQNN---IVHLDLKPQNILLSS-IYPLGDIKIVDFGMS---RKIGHACELR 191
Query: 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634
I+GT Y+ PE + + D+++ G++ +++
Sbjct: 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 38/235 (16%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL 488
++ N S LG G G V ++G+ +G+ AVKR+ L E K LT
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIK---LLTESD 84
Query: 489 QHVNLLRVLGYCTERDENML-IYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
H N++R YC+E + L I L N +L DL + L QK N I + Q
Sbjct: 85 DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNE-------------LNPKISDFGMAK-------L 586
+ + ++IHRDLK NIL+ L ISDFG+ K
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRN 638
FR +++ + GT G+ PE ++ K + D++S G + I+S ++
Sbjct: 203 FRXNLNNPS-----GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 101/235 (42%), Gaps = 38/235 (16%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL 488
++ N S LG G G V ++G+ +G+ AVKR+ L E K LT
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIK---LLTESD 84
Query: 489 QHVNLLRVLGYCTERDENML-IYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
H N++R YC+E + L I L N +L DL + L QK N I + Q
Sbjct: 85 DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 142
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNE-------------LNPKISDFGMAK-------L 586
+ + ++IHRDLK NIL+ L ISDFG+ K
Sbjct: 143 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 202
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRN 638
FR +++ + GT G+ PE ++ K + D++S G + I+S ++
Sbjct: 203 FRXNLNNPS-----GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 442 KLGEGGFGPVYK-GNLPRGQEFAVKRLSATSTQGLEEFK-NEVSLTARLQHVNLLRVLGY 499
+LG G FG V++ + G + AVK++ LE F+ E+ A L ++ + G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGA 134
Query: 500 CTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559
E + E L SL + + + L + + + +GL YL + R++
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKE---QGCLPEDRALYYLGQALEGLEYLH---SRRIL 188
Query: 560 HRDLKASNILLDNE-LNPKISDFGMAKLFRKD---VDEANTGRIVGTYGYVPPEYVKKGI 615
H D+KA N+LL ++ + + DFG A + D D I GT ++ PE V
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 616 YSMKYDVYSFGVLLLQII 633
K DV+S ++L ++
Sbjct: 249 CDAKVDVWSSCCMMLHML 266
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL ++ KI+DFG +K+ E + R +
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLC 183
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL ++ KI+DFG +K+ E + R +
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLC 177
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL + + KI+DFG +K+ E + R +
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLC 177
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL + + KI+DFG +K+ E + R +
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLC 176
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL + + KI+DFG +K+ + E + R +
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLC 316
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILL---DNELNPKISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL + + KI+DFG +K+ E + R +
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL----GETSLMRTLC 177
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 545 QGLLYLQEYSNFRVIHRDLKASNILLDNELNP---KISDFGMAKLFRKDVDEANTGR-IV 600
Q LL +Q +IHRDLK N+LL ++ KI+DFG +K+ + E + R +
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI----LGETSLMRTLC 302
Query: 601 GTYGYVPPEY---VKKGIYSMKYDVYSFGVLLLQIIS 634
GT Y+ PE V Y+ D +S GV+L +S
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 101/239 (42%), Gaps = 42/239 (17%)
Query: 431 KAATNNFSSANKLGEGGFGPV-YKGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARL 488
++ N S LG G G V ++G+ +G+ AVKR+ L E K LT
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIK---LLTESD 66
Query: 489 QHVNLLRVLGYCTERDENML-IYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQG 546
H N++R YC+E + L I L N +L DL + L QK N I + Q
Sbjct: 67 DHPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQI 124
Query: 547 LLYLQEYSNFRVIHRDLKASNILLDNE-------------LNPKISDFGMAK-------L 586
+ + ++IHRDLK NIL+ L ISDFG+ K
Sbjct: 125 ASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXX 184
Query: 587 FRKDVDEANTGRIVGTYGYVPPEYVK-------KGIYSMKYDVYSFGVLLLQIISSKRN 638
FR +++ + GT G+ PE ++ K + D++S G + I+S ++
Sbjct: 185 FRXNLNNPS-----GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 443 LGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYC 500
LGEG + V +L G+E+AVK + + EV + Q + N+L ++ +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560
+ L++E L S+ ++ ++ + ++ ++ V L +L + H
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI---QKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 561 RDLKASNILLDN--ELNP-KISDFGMAKLFRKD-----VDEANTGRIVGTYGYVPPEYV- 611
RDLK NIL ++ +++P KI DF + + + + G+ Y+ PE V
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 612 ----KKGIYSMKYDVYSFGVLLLQIIS 634
+ Y + D++S GV+L ++S
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLS 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,008,411
Number of Sequences: 62578
Number of extensions: 794472
Number of successful extensions: 4301
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 238
Number of HSP's that attempted gapping in prelim test: 1788
Number of HSP's gapped (non-prelim): 1246
length of query: 656
length of database: 14,973,337
effective HSP length: 105
effective length of query: 551
effective length of database: 8,402,647
effective search space: 4629858497
effective search space used: 4629858497
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)