Query 006211
Match_columns 656
No_of_seqs 480 out of 4266
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 19:59:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006211.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006211hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd02879 GH18_plant_chitinase_c 100.0 8.7E-66 1.9E-70 523.1 24.7 285 26-345 2-298 (299)
2 cd02873 GH18_IDGF The IDGF's ( 100.0 2.3E-61 4.9E-66 510.4 24.1 309 29-346 2-398 (413)
3 COG3325 ChiA Chitinase [Carboh 100.0 3.7E-61 7.9E-66 478.2 22.4 306 25-345 36-428 (441)
4 cd02872 GH18_chitolectin_chito 100.0 4.8E-61 1E-65 505.9 23.3 303 29-347 1-348 (362)
5 cd06548 GH18_chitinase The GH1 100.0 1.2E-60 2.7E-65 492.5 22.2 278 29-340 1-322 (322)
6 KOG2806 Chitinase [Carbohydrat 100.0 1.6E-60 3.5E-65 504.7 22.1 305 28-347 59-404 (432)
7 cd02878 GH18_zymocin_alpha Zym 100.0 2E-57 4.4E-62 471.2 22.1 292 29-340 2-345 (345)
8 smart00636 Glyco_18 Glycosyl h 100.0 4.3E-57 9.4E-62 471.5 23.0 291 29-340 2-334 (334)
9 cd02876 GH18_SI-CLP Stabilin-1 100.0 7.6E-54 1.6E-58 441.6 18.8 287 29-343 5-313 (318)
10 PF00704 Glyco_hydro_18: Glyco 100.0 1.8E-51 3.8E-56 432.4 14.2 297 28-340 2-343 (343)
11 cd02875 GH18_chitobiase Chitob 100.0 8.5E-50 1.9E-54 414.3 24.0 279 26-352 35-351 (358)
12 cd02874 GH18_CFLE_spore_hydrol 100.0 4.5E-48 9.8E-53 398.7 19.7 285 29-342 4-307 (313)
13 cd06545 GH18_3CO4_chitinase Th 100.0 5.3E-47 1.1E-51 377.7 20.8 240 29-341 1-243 (253)
14 cd06549 GH18_trifunctional GH1 100.0 3.1E-44 6.7E-49 365.3 19.2 284 29-342 2-295 (298)
15 KOG1187 Serine/threonine prote 100.0 3.1E-43 6.7E-48 365.6 21.6 231 421-654 61-293 (361)
16 KOG0595 Serine/threonine-prote 100.0 1.3E-43 2.7E-48 350.1 17.3 205 434-647 9-222 (429)
17 KOG0598 Ribosomal protein S6 k 100.0 6.5E-41 1.4E-45 328.4 15.8 203 434-644 24-230 (357)
18 KOG0575 Polo-like serine/threo 100.0 9.1E-41 2E-45 345.6 16.7 206 435-648 18-227 (592)
19 KOG0591 NIMA (never in mitosis 100.0 1.9E-41 4.1E-46 317.9 5.2 205 436-642 20-231 (375)
20 KOG0581 Mitogen-activated prot 100.0 2.5E-39 5.5E-44 317.2 18.2 197 437-642 81-280 (364)
21 KOG0192 Tyrosine kinase specif 100.0 1.2E-38 2.6E-43 328.7 19.8 201 439-644 45-251 (362)
22 KOG0616 cAMP-dependent protein 100.0 1.8E-38 3.8E-43 300.5 16.4 199 435-644 44-246 (355)
23 KOG0615 Serine/threonine prote 100.0 3.2E-39 7E-44 318.2 11.5 204 433-645 170-387 (475)
24 KOG0197 Tyrosine kinases [Sign 100.0 6.2E-39 1.3E-43 329.0 12.5 207 439-651 210-417 (468)
25 KOG1026 Nerve growth factor re 100.0 2.8E-38 6E-43 339.6 13.8 212 435-649 486-716 (774)
26 cd00598 GH18_chitinase-like Th 100.0 3.2E-37 6.9E-42 300.5 17.8 204 29-340 1-210 (210)
27 KOG0600 Cdc2-related protein k 100.0 9.6E-38 2.1E-42 315.3 14.3 208 434-648 116-329 (560)
28 KOG0592 3-phosphoinositide-dep 100.0 2.3E-37 5.1E-42 314.9 15.6 206 431-642 69-290 (604)
29 KOG0605 NDR and related serine 100.0 5.9E-37 1.3E-41 312.5 17.6 208 433-646 139-395 (550)
30 KOG0593 Predicted protein kina 100.0 7.3E-38 1.6E-42 296.7 10.1 208 435-650 2-213 (396)
31 KOG0597 Serine-threonine prote 100.0 1.2E-37 2.7E-42 316.8 12.2 197 435-640 2-201 (808)
32 KOG1094 Discoidin domain recep 100.0 2E-36 4.4E-41 309.0 15.0 207 434-644 537-746 (807)
33 KOG0659 Cdk activating kinase 100.0 4.4E-36 9.5E-41 280.2 14.8 202 435-644 2-207 (318)
34 KOG0578 p21-activated serine/t 100.0 2.4E-36 5.3E-41 310.4 13.2 200 435-643 273-473 (550)
35 KOG3653 Transforming growth fa 100.0 2.5E-35 5.4E-40 295.5 18.5 195 438-640 213-425 (534)
36 KOG0198 MEKK and related serin 100.0 9.7E-36 2.1E-40 297.7 13.9 202 435-641 17-224 (313)
37 KOG0661 MAPK related serine/th 100.0 1.6E-36 3.4E-41 304.3 7.4 201 433-643 8-214 (538)
38 KOG0694 Serine/threonine prote 100.0 2.1E-35 4.5E-40 309.3 16.1 207 432-647 365-576 (694)
39 KOG0583 Serine/threonine prote 100.0 5.7E-35 1.2E-39 304.4 19.3 203 433-643 15-227 (370)
40 KOG0193 Serine/threonine prote 100.0 1.5E-35 3.3E-40 305.2 14.1 206 428-641 385-595 (678)
41 KOG0582 Ste20-like serine/thre 100.0 9.9E-35 2.2E-39 289.2 17.0 206 434-643 25-236 (516)
42 KOG0196 Tyrosine kinase, EPH ( 100.0 1.1E-35 2.4E-40 313.0 8.0 205 436-646 630-842 (996)
43 KOG0663 Protein kinase PITSLRE 100.0 8.3E-35 1.8E-39 279.6 13.1 204 435-646 76-285 (419)
44 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-34 4.7E-39 305.0 17.1 203 435-643 1-240 (363)
45 KOG0588 Serine/threonine prote 100.0 1.6E-34 3.4E-39 300.2 14.7 198 436-642 13-215 (786)
46 KOG0611 Predicted serine/threo 100.0 9E-35 1.9E-39 284.9 11.9 202 433-643 51-257 (668)
47 KOG0585 Ca2+/calmodulin-depend 100.0 5.2E-34 1.1E-38 285.8 16.7 204 432-641 94-321 (576)
48 cd06544 GH18_narbonin Narbonin 100.0 1.7E-33 3.7E-38 275.9 19.6 202 39-268 13-222 (253)
49 KOG0610 Putative serine/threon 100.0 5.6E-34 1.2E-38 281.8 16.0 211 435-649 77-345 (459)
50 KOG4721 Serine/threonine prote 100.0 1.5E-34 3.2E-39 294.1 11.7 199 421-643 117-315 (904)
51 KOG0580 Serine/threonine prote 100.0 6.9E-35 1.5E-39 268.4 8.1 203 435-645 22-228 (281)
52 KOG0660 Mitogen-activated prot 100.0 3.2E-34 6.9E-39 280.2 12.8 211 433-650 20-239 (359)
53 cd05626 STKc_LATS2 Catalytic d 100.0 8.2E-34 1.8E-38 302.4 17.2 202 436-643 2-252 (381)
54 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.6E-33 3.5E-38 295.6 19.0 207 434-643 6-281 (338)
55 KOG0594 Protein kinase PCTAIRE 100.0 7.8E-34 1.7E-38 278.7 15.4 203 435-643 11-225 (323)
56 KOG0658 Glycogen synthase kina 100.0 8.1E-35 1.8E-39 284.8 8.3 197 436-643 25-230 (364)
57 KOG0194 Protein tyrosine kinas 100.0 4E-34 8.7E-39 298.6 13.3 204 434-644 156-368 (474)
58 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-33 7.4E-38 285.8 20.0 200 437-643 2-205 (285)
59 cd05629 STKc_NDR_like_fungal C 100.0 8.6E-34 1.9E-38 302.1 15.8 203 435-643 1-252 (377)
60 KOG0201 Serine/threonine prote 100.0 1.2E-34 2.6E-39 288.6 8.4 202 436-645 14-217 (467)
61 cd05612 STKc_PRKX_like Catalyt 100.0 1.3E-33 2.8E-38 289.8 16.3 198 435-643 1-202 (291)
62 cd05625 STKc_LATS1 Catalytic d 100.0 9.6E-34 2.1E-38 302.3 15.9 202 436-643 2-252 (382)
63 KOG1095 Protein tyrosine kinas 100.0 7.8E-34 1.7E-38 316.3 15.4 202 435-639 692-904 (1025)
64 cd05599 STKc_NDR_like Catalyti 100.0 1.2E-33 2.6E-38 299.7 16.0 203 435-643 1-243 (364)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-33 2.9E-38 295.5 15.8 199 435-644 1-203 (333)
66 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-33 5.9E-38 291.7 17.5 195 441-643 1-199 (323)
67 cd05598 STKc_LATS Catalytic do 100.0 1.1E-33 2.4E-38 301.2 14.7 204 435-644 1-249 (376)
68 KOG2052 Activin A type IB rece 100.0 2.9E-33 6.2E-38 278.7 16.4 199 429-635 205-422 (513)
69 PTZ00263 protein kinase A cata 100.0 2E-33 4.3E-38 293.4 16.2 197 435-642 18-218 (329)
70 PTZ00426 cAMP-dependent protei 100.0 2E-33 4.2E-38 294.3 16.1 198 435-643 30-232 (340)
71 cd05621 STKc_ROCK2 Catalytic d 100.0 1.8E-33 3.9E-38 297.9 15.7 203 433-643 41-251 (370)
72 cd05593 STKc_PKB_gamma Catalyt 100.0 4.4E-33 9.6E-38 290.6 17.6 195 441-643 1-199 (328)
73 cd05595 STKc_PKB_beta Catalyti 100.0 5.4E-33 1.2E-37 289.4 18.1 195 441-643 1-199 (323)
74 KOG0589 Serine/threonine prote 100.0 8.9E-34 1.9E-38 290.4 11.4 205 435-645 4-212 (426)
75 cd05585 STKc_YPK1_like Catalyt 100.0 8.4E-33 1.8E-37 286.6 18.3 192 443-642 1-196 (312)
76 cd05622 STKc_ROCK1 Catalytic d 100.0 4.3E-33 9.2E-38 295.3 16.3 207 429-643 37-251 (371)
77 cd05627 STKc_NDR2 Catalytic do 100.0 3.2E-33 6.9E-38 295.8 14.8 204 435-644 1-241 (360)
78 PTZ00267 NIMA-related protein 100.0 1.6E-32 3.5E-37 300.3 20.2 205 436-643 68-275 (478)
79 cd06649 PKc_MEK2 Catalytic dom 100.0 2.5E-32 5.4E-37 285.5 20.1 200 434-642 4-205 (331)
80 cd05096 PTKc_DDR1 Catalytic do 100.0 2.5E-32 5.4E-37 282.2 19.8 204 435-641 5-244 (304)
81 cd06546 GH18_CTS3_chitinase GH 100.0 5.4E-32 1.2E-36 267.5 21.2 196 28-262 1-217 (256)
82 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-32 2.9E-37 286.7 17.6 198 437-643 1-205 (324)
83 cd05584 STKc_p70S6K Catalytic 100.0 2E-32 4.3E-37 285.2 18.5 196 440-643 1-204 (323)
84 cd05596 STKc_ROCK Catalytic do 100.0 9.9E-33 2.2E-37 292.5 16.4 202 434-643 42-251 (370)
85 KOG4250 TANK binding protein k 100.0 4.7E-33 1E-37 292.4 13.4 204 437-646 15-231 (732)
86 cd05594 STKc_PKB_alpha Catalyt 100.0 7.4E-33 1.6E-37 288.8 14.8 195 441-643 1-200 (325)
87 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.9E-32 4E-37 280.8 17.4 201 435-643 5-208 (288)
88 cd05587 STKc_cPKC Catalytic do 100.0 2.2E-32 4.7E-37 285.2 18.0 200 436-643 1-205 (324)
89 cd05616 STKc_cPKC_beta Catalyt 100.0 1.8E-32 4E-37 285.6 17.5 200 436-643 1-205 (323)
90 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-32 5E-37 286.0 17.9 200 436-642 1-210 (332)
91 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.2E-33 1.6E-37 292.2 14.1 203 435-643 1-234 (350)
92 cd05597 STKc_DMPK_like Catalyt 100.0 2.6E-32 5.5E-37 285.3 18.0 202 435-642 1-211 (331)
93 cd05588 STKc_aPKC Catalytic do 100.0 3E-32 6.6E-37 284.5 18.2 194 441-642 1-199 (329)
94 cd05592 STKc_nPKC_theta_delta 100.0 3.6E-32 7.8E-37 282.3 18.6 195 441-643 1-200 (316)
95 KOG0667 Dual-specificity tyros 100.0 7.6E-33 1.7E-37 290.2 13.5 198 435-643 186-392 (586)
96 cd07848 STKc_CDKL5 Catalytic d 100.0 3.1E-32 6.8E-37 279.0 17.7 201 435-642 1-204 (287)
97 cd05618 STKc_aPKC_iota Catalyt 100.0 3.6E-32 7.9E-37 283.8 18.4 193 441-641 1-198 (329)
98 cd05624 STKc_MRCK_beta Catalyt 100.0 2E-32 4.3E-37 286.2 16.4 202 435-642 1-211 (331)
99 cd05591 STKc_nPKC_epsilon Cata 100.0 2.7E-32 5.8E-37 284.1 17.0 195 441-643 1-200 (321)
100 KOG0032 Ca2+/calmodulin-depend 100.0 4.4E-32 9.6E-37 282.4 18.3 204 433-646 33-245 (382)
101 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.5E-32 1.2E-36 279.4 18.9 201 434-642 4-207 (303)
102 cd05590 STKc_nPKC_eta Catalyti 100.0 4.2E-32 9E-37 282.4 18.0 195 441-643 1-200 (320)
103 cd05106 PTKc_CSF-1R Catalytic 100.0 4.4E-32 9.6E-37 287.9 18.6 207 434-643 37-319 (374)
104 cd05104 PTKc_Kit Catalytic dom 100.0 5.3E-32 1.1E-36 287.5 19.1 206 434-642 34-320 (375)
105 KOG0599 Phosphorylase kinase g 100.0 8.7E-33 1.9E-37 258.3 11.2 201 431-640 13-229 (411)
106 cd06650 PKc_MEK1 Catalytic dom 100.0 9.1E-32 2E-36 281.3 20.4 200 434-642 4-205 (333)
107 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.4E-32 1.2E-36 282.4 18.5 194 441-642 1-199 (327)
108 PLN00034 mitogen-activated pro 100.0 6.6E-32 1.4E-36 284.9 19.2 195 435-641 74-275 (353)
109 KOG0033 Ca2+/calmodulin-depend 100.0 3.1E-34 6.7E-39 264.2 1.1 203 434-645 10-218 (355)
110 cd05608 STKc_GRK1 Catalytic do 100.0 1.2E-31 2.6E-36 273.6 20.0 196 443-643 1-201 (280)
111 PHA02988 hypothetical protein; 100.0 1.2E-31 2.7E-36 273.7 19.7 193 440-643 25-226 (283)
112 cd05623 STKc_MRCK_alpha Cataly 100.0 5.1E-32 1.1E-36 283.3 17.1 202 435-642 1-211 (332)
113 cd05575 STKc_SGK Catalytic dom 100.0 5.7E-32 1.2E-36 281.9 17.4 195 441-643 1-200 (323)
114 cd05615 STKc_cPKC_alpha Cataly 100.0 6.6E-32 1.4E-36 281.2 17.9 200 436-643 1-205 (323)
115 cd05604 STKc_SGK3 Catalytic do 100.0 4.5E-32 9.7E-37 282.9 16.6 195 441-643 1-200 (325)
116 cd05619 STKc_nPKC_theta Cataly 100.0 5.7E-32 1.2E-36 280.7 17.2 195 441-643 1-200 (316)
117 KOG4717 Serine/threonine prote 100.0 2.7E-32 5.9E-37 274.7 14.2 211 434-652 17-232 (864)
118 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-31 2.4E-36 274.6 19.1 201 436-643 1-205 (285)
119 PTZ00283 serine/threonine prot 100.0 8E-32 1.7E-36 294.9 19.2 208 433-643 30-249 (496)
120 cd05601 STKc_CRIK Catalytic do 100.0 1.7E-32 3.7E-37 286.8 13.3 203 435-643 1-213 (330)
121 PRK13184 pknD serine/threonine 100.0 1.3E-31 2.7E-36 301.1 20.4 204 435-641 2-233 (932)
122 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.9E-32 1.9E-36 282.4 18.1 200 436-642 1-211 (338)
123 PHA03212 serine/threonine kina 100.0 1.1E-31 2.4E-36 285.8 18.8 193 434-640 91-284 (391)
124 COG3858 Predicted glycosyl hyd 100.0 4.1E-32 8.8E-37 270.3 14.3 221 110-342 174-412 (423)
125 cd05603 STKc_SGK2 Catalytic do 100.0 8.5E-32 1.8E-36 280.4 17.4 194 441-642 1-199 (321)
126 cd05602 STKc_SGK1 Catalytic do 100.0 9.5E-32 2.1E-36 280.4 17.7 195 441-643 1-200 (325)
127 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-31 2.3E-36 278.7 18.0 195 441-643 1-200 (316)
128 KOG0986 G protein-coupled rece 100.0 1.7E-32 3.7E-37 273.1 11.1 203 435-644 185-391 (591)
129 KOG0690 Serine/threonine prote 100.0 8.4E-33 1.8E-37 264.2 8.4 210 434-651 167-380 (516)
130 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.4E-31 5.2E-36 283.5 20.4 207 433-642 35-343 (400)
131 cd07862 STKc_CDK6 Catalytic do 100.0 2.6E-31 5.6E-36 272.6 19.7 201 435-643 1-213 (290)
132 cd05582 STKc_RSK_N N-terminal 100.0 5E-32 1.1E-36 281.7 14.2 195 441-643 2-202 (318)
133 KOG1989 ARK protein kinase fam 100.0 5.3E-32 1.1E-36 292.8 14.7 209 434-644 36-263 (738)
134 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-31 3.3E-36 277.9 17.6 203 435-643 7-216 (316)
135 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-31 3.8E-36 270.3 17.5 204 434-643 4-213 (266)
136 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-31 4.7E-36 276.8 18.3 195 441-643 1-200 (318)
137 KOG0574 STE20-like serine/thre 100.0 2E-33 4.3E-38 265.7 2.7 196 437-641 35-231 (502)
138 cd05048 PTKc_Ror Catalytic Dom 100.0 3.8E-31 8.2E-36 270.3 19.4 206 435-643 5-231 (283)
139 cd05049 PTKc_Trk Catalytic dom 100.0 2.7E-31 5.8E-36 270.9 18.1 207 435-644 5-230 (280)
140 KOG1025 Epidermal growth facto 100.0 3.5E-32 7.6E-37 287.6 11.7 206 439-650 700-912 (1177)
141 KOG4257 Focal adhesion tyrosin 100.0 1.1E-31 2.5E-36 275.8 14.8 209 431-646 385-600 (974)
142 KOG4279 Serine/threonine prote 100.0 2.2E-32 4.7E-37 283.8 9.6 199 442-645 582-784 (1226)
143 cd05607 STKc_GRK7 Catalytic do 100.0 9.2E-31 2E-35 266.7 20.9 193 443-642 1-197 (277)
144 cd05093 PTKc_TrkB Catalytic do 100.0 6.7E-31 1.5E-35 269.3 19.7 206 434-642 4-226 (288)
145 cd05090 PTKc_Ror1 Catalytic do 100.0 4.3E-31 9.3E-36 270.0 18.2 205 435-642 5-230 (283)
146 cd05062 PTKc_IGF-1R Catalytic 100.0 4.3E-31 9.2E-36 269.1 18.0 208 433-643 4-226 (277)
147 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-31 5.8E-36 267.8 15.6 201 439-643 3-210 (259)
148 cd05630 STKc_GRK6 Catalytic do 100.0 1E-30 2.2E-35 267.5 19.9 199 437-642 2-204 (285)
149 cd05072 PTKc_Lyn Catalytic dom 100.0 6.7E-31 1.5E-35 265.1 18.4 202 435-642 6-208 (261)
150 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.5E-31 1.6E-35 264.0 18.7 202 435-643 4-206 (256)
151 cd07853 STKc_NLK Catalytic dom 100.0 4.4E-31 9.5E-36 280.7 17.8 200 436-643 1-209 (372)
152 KOG0577 Serine/threonine prote 100.0 2E-32 4.3E-37 279.8 6.9 195 436-642 27-228 (948)
153 cd05054 PTKc_VEGFR Catalytic d 100.0 8.2E-31 1.8E-35 274.4 18.9 204 435-641 7-278 (337)
154 PTZ00036 glycogen synthase kin 100.0 3.9E-31 8.5E-36 286.1 17.0 199 434-643 65-275 (440)
155 cd07876 STKc_JNK2 Catalytic do 100.0 8.1E-31 1.8E-35 277.4 19.0 198 433-642 19-225 (359)
156 cd05094 PTKc_TrkC Catalytic do 100.0 1E-30 2.2E-35 268.4 18.9 206 435-643 5-230 (291)
157 cd06619 PKc_MKK5 Catalytic dom 100.0 2.1E-30 4.6E-35 264.3 20.9 193 435-641 1-195 (279)
158 cd07872 STKc_PCTAIRE2 Catalyti 100.0 7.2E-31 1.6E-35 271.9 17.5 202 435-644 6-210 (309)
159 cd05632 STKc_GRK5 Catalytic do 100.0 1.6E-30 3.5E-35 266.0 19.9 200 437-643 2-205 (285)
160 cd06646 STKc_MAP4K5 Catalytic 100.0 1.7E-30 3.6E-35 263.2 19.6 201 434-642 8-212 (267)
161 cd05068 PTKc_Frk_like Catalyti 100.0 1.6E-30 3.4E-35 262.5 19.4 204 434-643 5-209 (261)
162 cd05033 PTKc_EphR Catalytic do 100.0 1.8E-30 4E-35 262.8 19.9 204 435-643 4-213 (266)
163 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-30 2.4E-35 262.8 18.0 202 435-643 4-206 (256)
164 PHA03207 serine/threonine kina 100.0 7.8E-31 1.7E-35 280.4 17.5 199 433-643 90-291 (392)
165 cd05111 PTK_HER3 Pseudokinase 100.0 1.4E-30 2.9E-35 265.7 18.5 203 435-643 7-216 (279)
166 cd05092 PTKc_TrkA Catalytic do 100.0 1.7E-30 3.6E-35 265.2 18.9 205 435-642 5-228 (280)
167 KOG2345 Serine/threonine prote 100.0 1.2E-31 2.7E-36 248.0 9.4 208 433-641 19-243 (302)
168 cd06625 STKc_MEKK3_like Cataly 100.0 3.1E-30 6.8E-35 260.5 20.6 201 435-641 2-209 (263)
169 cd05091 PTKc_Ror2 Catalytic do 100.0 7.5E-31 1.6E-35 268.2 16.2 205 436-643 6-231 (283)
170 cd06654 STKc_PAK1 Catalytic do 100.0 1.8E-30 4E-35 267.1 19.1 200 435-643 20-220 (296)
171 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.2E-31 1.6E-35 264.9 15.7 204 434-643 5-209 (261)
172 cd05586 STKc_Sck1_like Catalyt 100.0 2.5E-31 5.4E-36 277.9 12.4 193 443-643 1-201 (330)
173 KOG4278 Protein tyrosine kinas 100.0 1.1E-31 2.5E-36 275.3 9.5 205 433-643 265-471 (1157)
174 cd06615 PKc_MEK Catalytic doma 100.0 2.7E-30 5.8E-35 267.5 19.9 199 435-642 1-201 (308)
175 cd06644 STKc_STK10_LOK Catalyt 100.0 3.9E-30 8.5E-35 264.1 21.0 202 434-642 11-218 (292)
176 cd05084 PTKc_Fes Catalytic dom 100.0 2.2E-30 4.8E-35 259.9 18.7 198 441-643 1-201 (252)
177 cd05059 PTKc_Tec_like Catalyti 100.0 2.5E-30 5.4E-35 260.2 19.0 201 436-643 5-206 (256)
178 cd07875 STKc_JNK1 Catalytic do 100.0 1.7E-30 3.7E-35 275.4 18.4 199 433-643 22-229 (364)
179 cd05035 PTKc_Axl_like Catalyti 100.0 3.5E-30 7.6E-35 261.5 20.0 204 437-643 1-220 (273)
180 PHA03211 serine/threonine kina 100.0 1.9E-30 4.1E-35 279.8 18.9 195 434-640 168-363 (461)
181 cd07868 STKc_CDK8 Catalytic do 100.0 3.3E-30 7.1E-35 268.0 19.9 197 440-642 6-219 (317)
182 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-30 3.8E-35 263.1 17.4 199 435-641 9-211 (267)
183 PLN00113 leucine-rich repeat r 100.0 6.8E-30 1.5E-34 304.5 25.3 190 434-640 689-879 (968)
184 cd05107 PTKc_PDGFR_beta Cataly 100.0 3.8E-30 8.1E-35 274.1 20.6 208 433-643 35-346 (401)
185 cd06656 STKc_PAK3 Catalytic do 100.0 3.2E-30 7E-35 265.4 19.5 201 434-643 18-219 (297)
186 KOG0607 MAP kinase-interacting 100.0 3.9E-31 8.5E-36 252.4 11.4 199 440-644 83-296 (463)
187 cd05032 PTKc_InsR_like Catalyt 100.0 1.8E-30 3.8E-35 264.5 17.1 207 434-643 5-226 (277)
188 cd08529 STKc_FA2-like Catalyti 100.0 4.5E-30 9.8E-35 258.1 19.8 202 436-643 1-205 (256)
189 PF00069 Pkinase: Protein kina 100.0 1.6E-30 3.4E-35 262.1 16.5 198 437-642 1-202 (260)
190 cd05042 PTKc_Aatyk Catalytic d 100.0 3.2E-30 6.8E-35 261.5 18.8 199 441-642 1-213 (269)
191 cd05109 PTKc_HER2 Catalytic do 100.0 2.8E-30 6.1E-35 263.4 18.5 203 434-642 6-215 (279)
192 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-30 3.8E-35 274.4 17.6 198 433-642 15-221 (355)
193 PTZ00266 NIMA-related protein 100.0 1.5E-30 3.3E-35 293.4 18.0 208 432-642 10-246 (1021)
194 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.7E-30 5.8E-35 263.3 18.1 207 434-643 5-226 (277)
195 cd08228 STKc_Nek6 Catalytic do 100.0 4E-30 8.7E-35 260.4 19.3 203 435-642 2-209 (267)
196 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-30 8.4E-35 263.6 19.3 207 433-642 4-225 (288)
197 cd05045 PTKc_RET Catalytic dom 100.0 3.7E-30 8.1E-35 264.1 19.2 205 436-643 1-234 (290)
198 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.6E-30 1.2E-34 259.7 20.0 200 441-643 1-214 (269)
199 cd05052 PTKc_Abl Catalytic dom 100.0 3.7E-30 8.1E-35 260.1 18.7 203 435-643 6-210 (263)
200 cd06655 STKc_PAK2 Catalytic do 100.0 3.6E-30 7.8E-35 264.9 18.8 200 435-643 19-219 (296)
201 cd06643 STKc_SLK Catalytic dom 100.0 5.1E-30 1.1E-34 261.9 19.8 199 437-642 7-211 (282)
202 KOG4236 Serine/threonine prote 100.0 3.4E-31 7.3E-36 267.4 10.7 195 440-642 569-769 (888)
203 cd05580 STKc_PKA Catalytic dom 100.0 4.3E-30 9.3E-35 263.6 19.2 198 435-643 1-202 (290)
204 cd06611 STKc_SLK_like Catalyti 100.0 3.8E-30 8.2E-35 262.6 18.5 203 434-643 4-212 (280)
205 cd05097 PTKc_DDR_like Catalyti 100.0 4E-30 8.6E-35 264.5 18.8 204 435-641 5-235 (295)
206 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3E-30 6.6E-35 271.3 18.3 198 432-642 12-219 (343)
207 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.4E-30 7.5E-35 266.5 18.3 206 435-643 18-247 (307)
208 cd05075 PTKc_Axl Catalytic dom 100.0 5.2E-30 1.1E-34 260.3 19.1 202 438-642 2-218 (272)
209 cd05053 PTKc_FGFR Catalytic do 100.0 2.3E-30 5E-35 265.9 16.7 208 433-643 10-239 (293)
210 cd05071 PTKc_Src Catalytic dom 100.0 5.5E-30 1.2E-34 258.7 19.1 202 435-643 6-208 (262)
211 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.2E-30 6.9E-35 266.4 17.7 207 434-643 14-244 (304)
212 cd05055 PTKc_PDGFR Catalytic d 100.0 5.3E-30 1.1E-34 264.4 19.1 205 434-642 34-247 (302)
213 PTZ00284 protein kinase; Provi 100.0 2E-30 4.4E-35 283.6 16.9 203 429-644 123-350 (467)
214 cd07863 STKc_CDK4 Catalytic do 100.0 4E-30 8.6E-35 263.5 18.0 199 436-642 1-210 (288)
215 cd05043 PTK_Ryk Pseudokinase d 100.0 5.4E-30 1.2E-34 261.4 18.8 206 434-642 5-223 (280)
216 cd07861 STKc_CDK1_euk Catalyti 100.0 7.1E-30 1.5E-34 261.2 19.8 201 436-642 1-205 (285)
217 cd05089 PTKc_Tie1 Catalytic do 100.0 5.9E-30 1.3E-34 263.5 19.2 203 435-643 2-223 (297)
218 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.9E-30 1.1E-34 262.6 18.4 202 435-642 1-210 (286)
219 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.7E-30 1.7E-34 257.3 19.6 202 435-643 6-208 (260)
220 cd06652 STKc_MEKK2 Catalytic d 100.0 6.6E-30 1.4E-34 258.5 19.1 202 435-642 2-212 (265)
221 cd06631 STKc_YSK4 Catalytic do 100.0 9.6E-30 2.1E-34 257.3 20.2 201 436-642 1-211 (265)
222 cd05051 PTKc_DDR Catalytic dom 100.0 8.1E-30 1.8E-34 262.3 19.9 206 434-642 4-237 (296)
223 cd00192 PTKc Catalytic domain 100.0 8.7E-30 1.9E-34 256.6 19.6 199 441-642 1-211 (262)
224 KOG0586 Serine/threonine prote 100.0 2E-30 4.3E-35 269.3 14.8 204 433-645 54-261 (596)
225 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8.7E-30 1.9E-34 260.3 19.5 198 437-641 6-212 (283)
226 cd05103 PTKc_VEGFR2 Catalytic 100.0 6.4E-30 1.4E-34 268.6 18.9 206 434-642 6-285 (343)
227 cd02871 GH18_chitinase_D-like 100.0 1.4E-29 3.1E-34 259.2 20.9 210 28-264 2-249 (312)
228 KOG0984 Mitogen-activated prot 100.0 8.6E-31 1.9E-35 235.8 10.1 205 435-645 46-258 (282)
229 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-29 2.6E-34 256.9 19.9 201 436-642 1-215 (267)
230 cd05095 PTKc_DDR2 Catalytic do 100.0 8.4E-30 1.8E-34 262.2 19.0 204 435-641 5-236 (296)
231 KOG0579 Ste20-like serine/thre 100.0 1.5E-31 3.2E-36 274.9 5.9 200 436-642 33-238 (1187)
232 cd08221 STKc_Nek9 Catalytic do 100.0 1.3E-29 2.8E-34 255.0 19.9 202 436-643 1-205 (256)
233 cd06651 STKc_MEKK3 Catalytic d 100.0 1.4E-29 3.1E-34 256.3 20.4 202 435-642 2-212 (266)
234 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-29 2.7E-34 255.9 19.8 202 435-643 3-208 (262)
235 cd06609 STKc_MST3_like Catalyt 100.0 9.7E-30 2.1E-34 258.7 19.0 199 435-642 1-201 (274)
236 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-29 3.1E-34 258.9 20.3 201 435-640 4-212 (284)
237 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.1E-30 1.5E-34 265.1 18.3 205 435-642 12-240 (314)
238 cd05085 PTKc_Fer Catalytic dom 100.0 2.2E-29 4.8E-34 252.3 21.2 196 441-642 1-198 (250)
239 cd08229 STKc_Nek7 Catalytic do 100.0 7.8E-30 1.7E-34 258.2 17.9 202 435-641 2-208 (267)
240 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-29 3E-34 256.6 19.6 205 433-642 6-214 (268)
241 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-29 2.4E-34 255.6 18.7 197 441-642 1-204 (257)
242 cd05088 PTKc_Tie2 Catalytic do 100.0 7.3E-30 1.6E-34 263.5 17.8 202 435-642 7-227 (303)
243 KOG0612 Rho-associated, coiled 100.0 3.9E-31 8.4E-36 289.3 8.6 207 428-641 68-283 (1317)
244 cd06612 STKc_MST1_2 Catalytic 100.0 1.6E-29 3.5E-34 254.1 19.8 199 435-642 3-202 (256)
245 cd05034 PTKc_Src_like Catalyti 100.0 1.3E-29 2.7E-34 255.8 19.1 203 434-642 5-208 (261)
246 cd08219 STKc_Nek3 Catalytic do 100.0 1.1E-29 2.4E-34 255.4 18.5 201 436-642 1-203 (255)
247 cd05116 PTKc_Syk Catalytic dom 100.0 1.1E-29 2.4E-34 255.8 18.5 195 442-643 2-203 (257)
248 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-29 4.7E-34 254.9 20.8 203 435-642 2-209 (267)
249 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-29 2.2E-34 262.3 18.6 201 435-643 6-209 (301)
250 cd07867 STKc_CDC2L6 Catalytic 100.0 1.6E-29 3.4E-34 262.9 20.2 196 441-642 7-219 (317)
251 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-29 2.9E-34 255.8 19.2 191 441-642 1-213 (262)
252 cd06637 STKc_TNIK Catalytic do 100.0 8.7E-30 1.9E-34 258.6 17.8 202 433-641 4-218 (272)
253 cd06659 STKc_PAK6 Catalytic do 100.0 3.8E-30 8.3E-35 264.8 15.3 196 439-643 25-221 (297)
254 cd05115 PTKc_Zap-70 Catalytic 100.0 1.5E-29 3.3E-34 254.7 19.3 195 442-642 2-202 (257)
255 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-29 3E-34 255.5 19.0 203 434-643 5-208 (260)
256 cd05050 PTKc_Musk Catalytic do 100.0 9.2E-30 2E-34 260.9 18.0 206 434-642 4-236 (288)
257 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-29 4.3E-34 255.1 20.0 206 435-643 1-211 (267)
258 cd06658 STKc_PAK5 Catalytic do 100.0 6.1E-30 1.3E-34 262.6 16.4 197 437-642 24-221 (292)
259 cd05057 PTKc_EGFR_like Catalyt 100.0 1.5E-29 3.2E-34 258.1 19.1 203 435-643 7-216 (279)
260 cd05065 PTKc_EphR_B Catalytic 100.0 1.3E-29 2.8E-34 257.0 18.6 202 436-642 5-215 (269)
261 KOG0199 ACK and related non-re 100.0 9.3E-31 2E-35 272.4 10.3 200 439-643 114-320 (1039)
262 PHA03209 serine/threonine kina 100.0 1.8E-29 3.8E-34 266.6 20.3 192 433-639 64-256 (357)
263 KOG0666 Cyclin C-dependent kin 100.0 5.6E-31 1.2E-35 250.6 7.8 205 434-642 23-243 (438)
264 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-29 3.2E-34 258.9 19.0 201 435-643 1-205 (286)
265 cd05609 STKc_MAST Catalytic do 100.0 1.6E-29 3.5E-34 261.3 19.4 202 435-642 1-219 (305)
266 cd05066 PTKc_EphR_A Catalytic 100.0 1.4E-29 3.1E-34 256.4 18.7 204 435-643 4-214 (267)
267 cd08227 PK_STRAD_alpha Pseudok 100.0 1.9E-29 4.1E-34 263.4 20.0 199 439-641 2-212 (327)
268 cd05574 STKc_phototropin_like 100.0 2E-29 4.3E-34 262.0 19.6 205 435-643 1-236 (316)
269 cd06640 STKc_MST4 Catalytic do 100.0 2.4E-29 5.2E-34 256.2 19.7 200 435-643 4-205 (277)
270 cd06638 STKc_myosinIIIA Cataly 100.0 1.1E-29 2.4E-34 260.0 17.1 213 425-643 8-233 (286)
271 cd05041 PTKc_Fes_like Catalyti 100.0 2.5E-29 5.3E-34 252.1 19.3 198 441-643 1-200 (251)
272 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.2E-29 4.7E-34 257.5 19.1 200 435-639 4-212 (284)
273 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.2E-29 4.8E-34 255.1 19.0 203 435-642 5-214 (268)
274 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.3E-29 2.8E-34 265.5 17.8 206 435-643 12-241 (334)
275 cd06647 STKc_PAK_I Catalytic d 100.0 2.1E-29 4.5E-34 258.9 18.7 200 435-643 19-219 (293)
276 cd08223 STKc_Nek4 Catalytic do 100.0 3.7E-29 7.9E-34 251.8 20.2 202 436-643 1-206 (257)
277 cd05069 PTKc_Yes Catalytic dom 100.0 3E-29 6.5E-34 253.0 19.4 201 435-642 6-207 (260)
278 cd06632 STKc_MEKK1_plant Catal 100.0 3E-29 6.5E-34 252.4 19.2 198 436-642 1-205 (258)
279 KOG0596 Dual specificity; seri 100.0 5.3E-30 1.2E-34 261.3 13.6 202 433-641 359-574 (677)
280 KOG0696 Serine/threonine prote 100.0 1.1E-30 2.3E-35 256.9 8.2 205 434-646 348-557 (683)
281 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-29 2.4E-34 258.7 15.9 197 436-641 5-203 (277)
282 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.8E-29 6.1E-34 255.3 18.7 191 442-643 2-226 (274)
283 cd05039 PTKc_Csk_like Catalyti 100.0 4.1E-29 8.9E-34 251.4 19.6 198 434-642 5-203 (256)
284 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-29 3.5E-34 261.0 17.0 202 435-642 7-215 (303)
285 KOG1024 Receptor-like protein 100.0 7.8E-30 1.7E-34 249.6 13.7 213 427-642 276-502 (563)
286 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-29 3.9E-34 258.2 17.1 200 435-643 5-206 (284)
287 cd06630 STKc_MEKK1 Catalytic d 100.0 2.7E-29 5.8E-34 254.4 18.2 201 436-642 1-211 (268)
288 cd05073 PTKc_Hck Catalytic dom 100.0 3.7E-29 8.1E-34 252.3 19.1 203 434-643 5-208 (260)
289 KOG0983 Mitogen-activated prot 100.0 2.9E-30 6.3E-35 241.7 10.0 198 437-642 94-297 (391)
290 cd05046 PTK_CCK4 Pseudokinase 100.0 4.3E-29 9.3E-34 254.0 19.3 203 435-641 5-221 (275)
291 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.7E-29 1E-33 253.3 19.5 200 436-641 2-214 (272)
292 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.4E-29 1.2E-33 251.7 19.7 202 435-642 2-212 (264)
293 cd05047 PTKc_Tie Catalytic dom 100.0 6E-29 1.3E-33 252.3 20.0 196 441-642 1-215 (270)
294 KOG0662 Cyclin-dependent kinas 100.0 3.1E-30 6.7E-35 227.0 9.0 196 436-639 3-202 (292)
295 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.7E-29 7.9E-34 252.0 18.1 189 441-642 1-210 (259)
296 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.5E-29 7.6E-34 256.9 18.2 201 434-642 4-207 (291)
297 KOG4645 MAPKKK (MAP kinase kin 100.0 3.2E-31 6.9E-36 293.5 3.2 205 434-644 1234-1446(1509)
298 KOG1006 Mitogen-activated prot 100.0 1.8E-31 3.9E-36 248.9 1.1 200 439-644 68-274 (361)
299 cd05044 PTKc_c-ros Catalytic d 100.0 1.9E-29 4.2E-34 255.7 15.9 200 441-643 1-218 (269)
300 cd06623 PKc_MAPKK_plant_like C 100.0 7.6E-29 1.6E-33 250.3 20.1 201 435-643 1-204 (264)
301 cd05082 PTKc_Csk Catalytic dom 100.0 5.1E-29 1.1E-33 250.7 18.7 196 435-642 6-203 (256)
302 KOG0584 Serine/threonine prote 100.0 3.7E-30 8E-35 267.5 10.6 193 440-641 45-245 (632)
303 cd07844 STKc_PCTAIRE_like Cata 100.0 4E-29 8.8E-34 256.5 18.3 201 435-643 5-208 (291)
304 cd05056 PTKc_FAK Catalytic dom 100.0 5.5E-29 1.2E-33 252.6 19.0 202 435-643 6-213 (270)
305 cd06917 STKc_NAK1_like Catalyt 100.0 6.1E-29 1.3E-33 253.2 19.4 199 436-643 2-206 (277)
306 cd07842 STKc_CDK8_like Catalyt 100.0 4.2E-29 9.1E-34 259.5 18.4 205 436-644 1-221 (316)
307 cd05060 PTKc_Syk_like Catalyti 100.0 7.1E-29 1.5E-33 249.8 19.5 196 441-643 1-203 (257)
308 cd07832 STKc_CCRK Catalytic do 100.0 5.7E-29 1.2E-33 254.5 19.1 199 436-641 1-203 (286)
309 cd05112 PTKc_Itk Catalytic dom 100.0 7.5E-29 1.6E-33 249.4 19.4 201 436-643 5-206 (256)
310 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.4E-29 1.2E-33 252.4 18.5 198 441-641 1-211 (268)
311 KOG1151 Tousled-like protein k 100.0 1.5E-30 3.3E-35 257.8 6.9 206 432-641 460-686 (775)
312 PHA03210 serine/threonine kina 100.0 3.2E-29 6.9E-34 275.3 18.0 203 432-640 145-369 (501)
313 KOG0608 Warts/lats-like serine 100.0 1.2E-29 2.6E-34 261.3 13.5 213 435-653 629-886 (1034)
314 cd07846 STKc_CDKL2_3 Catalytic 100.0 3.1E-29 6.8E-34 256.5 16.2 199 435-641 1-203 (286)
315 cd06641 STKc_MST3 Catalytic do 100.0 1.3E-28 2.8E-33 250.8 20.5 198 436-642 5-204 (277)
316 cd06639 STKc_myosinIIIB Cataly 100.0 5.4E-29 1.2E-33 255.6 17.9 211 426-642 13-236 (291)
317 cd05578 STKc_Yank1 Catalytic d 100.0 1.7E-29 3.7E-34 254.4 13.9 199 436-643 1-203 (258)
318 cd07836 STKc_Pho85 Catalytic d 100.0 8.2E-29 1.8E-33 253.2 19.1 202 436-643 1-205 (284)
319 cd06636 STKc_MAP4K4_6 Catalyti 100.0 6.9E-29 1.5E-33 253.5 18.4 210 426-642 7-229 (282)
320 cd06626 STKc_MEKK4 Catalytic d 100.0 1.1E-28 2.3E-33 249.4 19.5 201 436-642 1-209 (264)
321 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-28 2.6E-33 252.2 20.1 197 437-642 21-218 (285)
322 cd08218 STKc_Nek1 Catalytic do 100.0 7.4E-29 1.6E-33 249.4 18.3 201 436-642 1-204 (256)
323 cd08220 STKc_Nek8 Catalytic do 100.0 9.2E-29 2E-33 248.6 18.9 201 436-643 1-205 (256)
324 smart00219 TyrKc Tyrosine kina 100.0 1.3E-28 2.7E-33 247.7 19.5 201 437-642 1-208 (258)
325 cd07839 STKc_CDK5 Catalytic do 100.0 3.2E-29 6.9E-34 256.2 15.3 197 436-640 1-201 (284)
326 cd06605 PKc_MAPKK Catalytic do 100.0 4.7E-29 1E-33 252.1 16.4 198 436-642 2-202 (265)
327 cd07841 STKc_CDK7 Catalytic do 100.0 8.5E-29 1.8E-33 255.0 18.5 198 436-641 1-205 (298)
328 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.1E-28 2.4E-33 250.7 19.1 203 437-642 1-219 (273)
329 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-28 2.7E-33 248.7 19.3 194 441-639 1-202 (262)
330 cd07833 STKc_CDKL Catalytic do 100.0 7.1E-29 1.5E-33 254.1 17.8 200 435-641 1-204 (288)
331 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-28 2.6E-33 251.1 19.3 194 443-643 1-198 (277)
332 cd05633 STKc_GRK3 Catalytic do 100.0 1.5E-28 3.2E-33 250.7 19.9 192 442-643 1-200 (279)
333 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-28 2.3E-33 252.2 18.6 201 435-641 1-209 (283)
334 PHA03390 pk1 serine/threonine- 100.0 2.9E-28 6.3E-33 246.8 21.1 198 428-642 7-209 (267)
335 cd05083 PTKc_Chk Catalytic dom 100.0 9.9E-29 2.1E-33 248.3 17.4 196 435-643 6-202 (254)
336 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.4E-29 1.2E-33 250.9 15.4 190 441-641 1-208 (258)
337 cd05613 STKc_MSK1_N N-terminal 100.0 1.7E-28 3.7E-33 251.7 19.3 200 436-642 1-211 (290)
338 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.1E-28 2.4E-33 252.1 17.8 202 435-641 4-214 (284)
339 cd08528 STKc_Nek10 Catalytic d 100.0 2E-28 4.3E-33 248.3 19.3 201 436-641 1-215 (269)
340 cd08217 STKc_Nek2 Catalytic do 100.0 1.8E-28 4E-33 247.5 19.0 206 436-643 1-214 (265)
341 cd05122 PKc_STE Catalytic doma 100.0 3.5E-28 7.6E-33 243.3 20.7 199 436-642 1-200 (253)
342 cd06607 STKc_TAO Catalytic dom 100.0 3.1E-28 6.8E-33 251.9 20.7 195 435-641 15-216 (307)
343 cd06614 STKc_PAK Catalytic dom 100.0 2.5E-28 5.4E-33 250.0 19.7 203 433-643 17-220 (286)
344 cd07860 STKc_CDK2_3 Catalytic 100.0 1.4E-28 3.1E-33 251.4 17.8 200 436-642 1-204 (284)
345 cd07850 STKc_JNK Catalytic dom 100.0 1.9E-28 4E-33 258.7 19.1 198 433-642 14-220 (353)
346 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-28 4.7E-33 251.3 19.1 201 435-643 5-211 (293)
347 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2E-28 4.4E-33 250.8 18.7 201 435-642 1-206 (287)
348 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-28 6.1E-33 246.1 19.5 192 443-643 1-196 (262)
349 KOG0604 MAP kinase-activated p 100.0 1.4E-29 3.1E-34 240.0 8.8 196 433-640 59-264 (400)
350 cd05606 STKc_beta_ARK Catalyti 100.0 3.3E-28 7.2E-33 247.9 19.6 191 442-642 1-199 (278)
351 cd06657 STKc_PAK4 Catalytic do 100.0 2.2E-28 4.7E-33 251.0 18.2 194 440-642 25-219 (292)
352 cd06606 STKc_MAPKKK Catalytic 100.0 4.7E-28 1E-32 243.4 20.2 202 436-643 1-207 (260)
353 cd07837 STKc_CdkB_plant Cataly 100.0 3.5E-28 7.5E-33 250.0 19.1 202 435-642 1-215 (295)
354 cd06608 STKc_myosinIII_like Ca 100.0 3.1E-28 6.8E-33 247.3 18.4 203 433-641 4-220 (275)
355 cd07849 STKc_ERK1_2_like Catal 100.0 1.7E-28 3.7E-33 257.2 16.7 200 434-641 4-212 (336)
356 cd05579 STKc_MAST_like Catalyt 100.0 2E-28 4.4E-33 247.2 16.7 195 443-643 1-205 (265)
357 PHA02882 putative serine/threo 100.0 3.1E-28 6.7E-33 250.2 18.1 203 434-643 11-237 (294)
358 KOG0614 cGMP-dependent protein 100.0 5.6E-30 1.2E-34 258.0 4.9 199 437-644 422-624 (732)
359 cd07835 STKc_CDK1_like Catalyt 100.0 4.3E-28 9.3E-33 247.7 18.7 199 437-642 1-203 (283)
360 KOG0668 Casein kinase II, alph 100.0 1.2E-29 2.5E-34 231.8 6.1 206 434-655 37-248 (338)
361 cd05611 STKc_Rim15_like Cataly 100.0 5.7E-28 1.2E-32 243.6 18.9 190 441-642 2-196 (260)
362 cd07845 STKc_CDK10 Catalytic d 100.0 4.3E-28 9.3E-33 251.1 18.3 201 434-642 6-212 (309)
363 cd07852 STKc_MAPK15 Catalytic 100.0 3.5E-28 7.5E-33 255.0 17.6 203 433-643 5-217 (337)
364 cd06627 STKc_Cdc7_like Catalyt 100.0 1E-27 2.3E-32 240.5 20.3 199 436-642 1-202 (254)
365 cd07865 STKc_CDK9 Catalytic do 100.0 3.3E-28 7.2E-33 251.9 16.9 203 434-642 11-227 (310)
366 PLN00009 cyclin-dependent kina 100.0 8.2E-28 1.8E-32 247.2 19.6 201 435-642 2-207 (294)
367 cd06616 PKc_MKK4 Catalytic dom 100.0 4.1E-28 8.8E-33 248.6 17.1 201 436-642 5-213 (288)
368 cd07877 STKc_p38alpha_MAPK14 C 100.0 6E-28 1.3E-32 253.8 18.7 203 427-642 9-221 (345)
369 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-27 2.6E-32 248.7 20.7 194 436-641 26-226 (317)
370 KOG0695 Serine/threonine prote 100.0 1.1E-28 2.4E-33 236.8 11.7 202 434-643 249-455 (593)
371 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-27 2.4E-32 240.7 19.4 203 436-643 1-207 (258)
372 cd07840 STKc_CDK9_like Catalyt 100.0 8.6E-28 1.9E-32 245.8 18.9 200 437-643 1-206 (287)
373 cd08225 STKc_Nek5 Catalytic do 100.0 5.3E-28 1.2E-32 243.2 16.8 201 436-642 1-205 (257)
374 cd07864 STKc_CDK12 Catalytic d 100.0 9.8E-28 2.1E-32 247.5 18.9 203 432-641 4-220 (302)
375 cd07831 STKc_MOK Catalytic dom 100.0 1.3E-27 2.8E-32 244.0 19.3 196 437-642 1-202 (282)
376 cd05581 STKc_PDK1 Catalytic do 100.0 4E-28 8.6E-33 247.3 15.3 203 435-643 1-226 (280)
377 cd07855 STKc_ERK5 Catalytic do 100.0 5.3E-28 1.1E-32 253.3 16.1 202 434-642 4-215 (334)
378 cd08530 STKc_CNK2-like Catalyt 100.0 8.2E-28 1.8E-32 241.6 16.8 201 436-643 1-205 (256)
379 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-27 2.6E-32 251.4 18.5 198 432-642 12-219 (343)
380 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.1E-27 2.4E-32 249.9 17.9 199 431-642 6-209 (328)
381 cd05583 STKc_MSK_N N-terminal 100.0 1E-27 2.2E-32 245.8 17.2 199 436-641 1-210 (288)
382 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.2E-28 1.6E-32 252.5 16.4 200 434-642 4-212 (337)
383 cd06633 STKc_TAO3 Catalytic do 100.0 4.1E-27 8.9E-32 244.1 21.2 194 437-642 23-223 (313)
384 cd07879 STKc_p38delta_MAPK13 C 100.0 1.6E-27 3.5E-32 250.4 18.3 195 434-642 14-218 (342)
385 PTZ00024 cyclin-dependent prot 100.0 1.7E-27 3.7E-32 249.6 18.2 203 434-643 7-238 (335)
386 cd06618 PKc_MKK7 Catalytic dom 100.0 1.8E-27 3.8E-32 245.0 17.8 199 435-641 15-220 (296)
387 cd08216 PK_STRAD Pseudokinase 100.0 2.2E-27 4.7E-32 246.5 18.2 198 439-641 6-212 (314)
388 cd08226 PK_STRAD_beta Pseudoki 100.0 2.8E-27 6E-32 247.2 18.8 198 441-642 4-213 (328)
389 cd07838 STKc_CDK4_6_like Catal 100.0 3.5E-27 7.6E-32 241.3 19.2 199 437-643 1-210 (287)
390 cd05118 STKc_CMGC Catalytic do 99.9 2.1E-27 4.6E-32 242.4 17.1 199 437-643 1-203 (283)
391 cd07854 STKc_MAPK4_6 Catalytic 99.9 1.4E-27 3E-32 250.9 15.8 200 435-642 5-222 (342)
392 KOG0587 Traf2- and Nck-interac 99.9 9.3E-28 2E-32 257.3 14.5 203 432-641 16-230 (953)
393 cd07834 STKc_MAPK Catalytic do 99.9 2E-27 4.2E-32 248.6 16.5 201 436-643 1-211 (330)
394 cd06634 STKc_TAO2 Catalytic do 99.9 3.4E-27 7.3E-32 244.3 17.9 195 436-642 16-217 (308)
395 cd07866 STKc_BUR1 Catalytic do 99.9 1.7E-27 3.7E-32 246.7 15.6 203 434-642 7-230 (311)
396 cd07857 STKc_MPK1 Catalytic do 99.9 5.3E-27 1.2E-31 245.5 18.4 200 436-642 1-213 (332)
397 cd07830 STKc_MAK_like Catalyti 99.9 4.5E-27 9.8E-32 240.1 17.4 198 437-642 1-202 (283)
398 cd05123 STKc_AGC Catalytic dom 99.9 6.7E-27 1.4E-31 234.2 18.2 193 443-643 1-197 (250)
399 cd07829 STKc_CDK_like Catalyti 99.9 5.5E-27 1.2E-31 239.3 16.8 198 437-642 1-202 (282)
400 KOG0664 Nemo-like MAPK-related 99.9 3.4E-29 7.3E-34 234.2 0.4 206 437-650 55-269 (449)
401 KOG1035 eIF-2alpha kinase GCN2 99.9 1.2E-27 2.5E-32 264.3 12.5 199 432-635 476-814 (1351)
402 KOG0200 Fibroblast/platelet-de 99.9 6.3E-27 1.4E-31 261.1 17.1 203 434-639 295-521 (609)
403 cd08222 STKc_Nek11 Catalytic d 99.9 6.8E-27 1.5E-31 235.8 15.3 200 436-641 1-207 (260)
404 cd07851 STKc_p38 Catalytic dom 99.9 4.3E-27 9.4E-32 247.2 14.2 197 433-642 13-219 (343)
405 KOG0671 LAMMER dual specificit 99.9 6.1E-28 1.3E-32 236.9 6.9 210 433-653 87-323 (415)
406 cd05610 STKc_MASTL Catalytic d 99.9 2E-26 4.4E-31 260.9 19.8 145 435-585 4-152 (669)
407 cd05576 STKc_RPK118_like Catal 99.9 1.4E-26 3E-31 230.1 15.7 180 446-641 4-184 (237)
408 KOG0603 Ribosomal protein S6 k 99.9 5E-27 1.1E-31 245.3 12.8 196 434-645 321-519 (612)
409 PLN03224 probable serine/threo 99.9 4.7E-26 1E-30 245.3 17.7 203 434-640 144-434 (507)
410 KOG0669 Cyclin T-dependent kin 99.9 1.8E-28 3.9E-33 227.1 -1.0 204 435-644 17-234 (376)
411 KOG1152 Signal transduction se 99.9 4.7E-27 1E-31 240.6 9.0 196 435-640 561-770 (772)
412 smart00221 STYKc Protein kinas 99.9 2.2E-25 4.7E-30 219.0 19.1 199 437-641 1-202 (225)
413 KOG1027 Serine/threonine prote 99.9 3.2E-26 7E-31 244.4 6.7 197 437-641 511-717 (903)
414 PLN03225 Serine/threonine-prot 99.9 3.8E-25 8.2E-30 244.5 15.0 199 433-639 130-379 (566)
415 smart00220 S_TKc Serine/Threon 99.9 1.5E-24 3.2E-29 215.4 16.8 186 447-641 1-188 (244)
416 KOG2091 Predicted member of gl 99.9 1.5E-24 3.2E-29 205.6 12.1 289 28-342 80-386 (392)
417 cd06542 GH18_EndoS-like Endo-b 99.9 1.1E-23 2.4E-28 210.9 17.7 228 28-342 2-243 (255)
418 KOG1345 Serine/threonine kinas 99.9 2.4E-25 5.2E-30 208.6 5.2 194 434-640 23-226 (378)
419 KOG0670 U4/U6-associated splic 99.9 1.3E-25 2.7E-30 227.3 3.4 209 430-647 427-643 (752)
420 KOG0665 Jun-N-terminal kinase 99.9 8.2E-25 1.8E-29 210.1 8.3 194 435-641 17-219 (369)
421 cd06543 GH18_PF-ChiA-like PF-C 99.9 2.5E-23 5.3E-28 208.6 13.6 149 46-217 23-183 (294)
422 KOG1167 Serine/threonine prote 99.9 8.5E-24 1.8E-28 210.8 8.2 214 430-655 31-293 (418)
423 KOG0576 Mitogen-activated prot 99.9 1.3E-24 2.8E-29 226.4 2.4 198 434-639 14-215 (829)
424 cd00180 PKc Catalytic domain o 99.9 4.8E-22 1E-26 192.5 19.5 183 443-632 1-187 (215)
425 cd02877 GH18_hevamine_XipI_cla 99.9 7.1E-22 1.5E-26 196.7 18.3 237 29-342 3-270 (280)
426 KOG1290 Serine/threonine prote 99.9 2.2E-22 4.8E-27 203.1 14.5 132 435-571 78-222 (590)
427 PRK09188 serine/threonine prot 99.9 2.1E-22 4.5E-27 208.1 14.6 167 432-614 15-195 (365)
428 KOG1164 Casein kinase (serine/ 99.9 9.4E-21 2E-25 196.6 16.2 203 436-643 19-241 (322)
429 KOG1165 Casein kinase (serine/ 99.8 7.5E-21 1.6E-25 183.5 13.7 205 433-645 26-242 (449)
430 KOG1163 Casein kinase (serine/ 99.8 3.1E-21 6.8E-26 178.2 8.2 205 433-645 13-227 (341)
431 COG0515 SPS1 Serine/threonine 99.8 5.2E-19 1.1E-23 183.8 19.5 202 437-643 2-215 (384)
432 PRK10359 lipopolysaccharide co 99.8 4E-20 8.6E-25 177.7 9.9 172 432-633 28-216 (232)
433 PLN00181 protein SPA1-RELATED; 99.8 1.3E-20 2.7E-25 219.1 7.3 147 488-640 29-216 (793)
434 cd05147 RIO1_euk RIO kinase fa 99.8 2.2E-19 4.8E-24 170.8 12.4 139 440-587 2-167 (190)
435 cd05145 RIO1_like RIO kinase f 99.8 1.3E-18 2.9E-23 166.1 15.1 140 440-588 2-168 (190)
436 PRK12274 serine/threonine prot 99.8 4.5E-18 9.8E-23 159.8 14.0 185 439-641 6-209 (218)
437 smart00750 KIND kinase non-cat 99.7 3.8E-18 8.3E-23 161.1 10.3 107 516-642 1-107 (176)
438 KOG0590 Checkpoint kinase and 99.7 5.2E-19 1.1E-23 195.0 3.9 202 439-647 322-533 (601)
439 PRK10345 hypothetical protein; 99.7 4.2E-17 9.2E-22 156.5 14.4 138 438-586 5-159 (210)
440 KOG1166 Mitotic checkpoint ser 99.7 1.5E-17 3.3E-22 186.7 10.3 200 430-638 693-902 (974)
441 KOG0603 Ribosomal protein S6 k 99.7 2.8E-18 6.1E-23 180.1 2.5 186 442-641 1-193 (612)
442 KOG0195 Integrin-linked kinase 99.7 5.5E-18 1.2E-22 159.3 4.2 195 440-644 195-394 (448)
443 smart00090 RIO RIO-like kinase 99.7 4.7E-16 1E-20 153.1 13.8 143 435-587 28-198 (237)
444 PRK14879 serine/threonine prot 99.7 7.1E-16 1.5E-20 150.2 14.6 134 441-586 2-143 (211)
445 cd05144 RIO2_C RIO kinase fami 99.7 9.5E-16 2.1E-20 147.6 14.2 141 432-588 12-176 (198)
446 TIGR03724 arch_bud32 Kae1-asso 99.6 1.8E-15 3.9E-20 145.9 13.9 131 442-587 1-139 (199)
447 PRK09605 bifunctional UGMP fam 99.6 2.5E-15 5.5E-20 166.6 14.5 138 434-587 332-477 (535)
448 PF14531 Kinase-like: Kinase-l 99.6 1.9E-15 4E-20 149.9 10.9 199 438-645 15-256 (288)
449 KOG1240 Protein kinase contain 99.6 1.9E-16 4.1E-21 174.4 2.6 196 436-640 24-240 (1431)
450 cd05120 APH_ChoK_like Aminogly 99.6 3E-14 6.6E-19 130.4 13.7 135 439-586 2-138 (155)
451 cd05119 RIO RIO kinase family, 99.6 3.4E-14 7.3E-19 135.5 12.5 137 440-588 2-165 (187)
452 KOG1033 eIF-2alpha kinase PEK/ 99.5 1.4E-15 3.1E-20 156.9 1.8 124 505-634 330-457 (516)
453 COG3469 Chitinase [Carbohydrat 99.5 1.8E-12 3.9E-17 120.2 20.6 215 24-262 23-266 (332)
454 KOG1023 Natriuretic peptide re 99.5 2.4E-14 5.2E-19 151.0 9.4 157 485-645 1-164 (484)
455 PRK01723 3-deoxy-D-manno-octul 99.5 2.2E-13 4.9E-18 134.4 14.3 136 440-587 36-192 (239)
456 KOG0606 Microtubule-associated 99.5 1.4E-14 3E-19 159.9 5.1 172 434-648 82-267 (1205)
457 KOG0590 Checkpoint kinase and 99.4 3.6E-14 7.8E-19 156.8 0.4 207 436-646 21-237 (601)
458 TIGR01982 UbiB 2-polyprenylphe 99.4 2.7E-12 5.8E-17 137.8 13.6 140 441-588 123-308 (437)
459 KOG4158 BRPK/PTEN-induced prot 99.4 1.4E-12 3E-17 129.6 9.7 145 489-641 274-459 (598)
460 cd05151 ChoK Choline Kinase (C 99.2 6.2E-11 1.3E-15 111.0 10.8 131 440-586 3-136 (170)
461 PRK04750 ubiB putative ubiquin 99.2 6.7E-11 1.4E-15 128.4 12.2 146 433-589 118-316 (537)
462 KOG1243 Protein kinase [Genera 99.2 1.6E-10 3.5E-15 123.3 13.4 167 455-635 33-199 (690)
463 cd05146 RIO3_euk RIO kinase fa 99.1 3.2E-09 6.9E-14 100.2 14.5 134 441-586 3-173 (197)
464 cd05154 ACAD10_11_like Acyl-Co 99.0 2.5E-09 5.4E-14 104.8 13.5 142 441-586 4-206 (223)
465 KOG3087 Serine/threonine prote 99.0 3.6E-09 7.9E-14 95.6 12.7 144 439-587 11-166 (229)
466 COG3642 Mn2+-dependent serine/ 99.0 4.4E-09 9.5E-14 95.7 12.8 131 441-586 2-140 (204)
467 KOG0601 Cyclin-dependent kinas 99.0 4.5E-10 9.7E-15 118.9 5.7 200 435-641 114-329 (524)
468 KOG4701 Chitinase [Cell wall/m 98.9 4E-08 8.7E-13 96.7 14.0 80 88-187 102-192 (568)
469 KOG0601 Cyclin-dependent kinas 98.9 1.1E-09 2.3E-14 116.1 2.9 196 433-639 263-466 (524)
470 KOG1266 Protein kinase [Signal 98.8 4.1E-09 8.9E-14 102.9 5.6 155 483-639 119-282 (458)
471 PF01163 RIO1: RIO1 family; I 98.7 7.3E-08 1.6E-12 90.7 10.9 124 450-586 1-155 (188)
472 PRK15123 lipopolysaccharide co 98.7 3.8E-07 8.3E-12 91.1 15.6 141 441-586 28-194 (268)
473 KOG0606 Microtubule-associated 98.6 7E-09 1.5E-13 115.6 0.9 205 434-644 803-1040(1205)
474 KOG3741 Poly(A) ribonuclease s 98.6 4.4E-07 9.5E-12 94.4 13.5 170 447-638 288-475 (655)
475 COG0478 RIO-like serine/threon 98.5 6.9E-07 1.5E-11 86.4 11.6 134 437-585 93-250 (304)
476 COG4248 Uncharacterized protei 98.4 3.5E-06 7.7E-11 85.6 13.4 192 439-641 15-224 (637)
477 COG0661 AarF Predicted unusual 98.4 1.7E-06 3.7E-11 93.7 11.8 145 435-589 126-317 (517)
478 PF06293 Kdo: Lipopolysacchari 98.4 2.9E-06 6.3E-11 81.9 12.0 106 476-587 56-171 (206)
479 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 9.1E-06 2E-10 79.5 13.8 139 441-586 7-182 (226)
480 PRK09902 hypothetical protein; 98.3 1.5E-05 3.3E-10 75.5 14.3 139 443-586 26-179 (216)
481 PF06176 WaaY: Lipopolysacchar 98.2 3.5E-05 7.6E-10 73.3 13.9 139 432-586 28-183 (229)
482 KOG1235 Predicted unusual prot 98.2 1.4E-05 2.9E-10 86.4 11.5 141 441-588 167-356 (538)
483 cd05150 APH Aminoglycoside 3'- 98.1 5.8E-05 1.2E-09 75.1 13.3 141 442-586 5-193 (244)
484 cd06547 GH85_ENGase Endo-beta- 98.1 3E-05 6.5E-10 79.9 11.4 158 81-271 53-219 (339)
485 PF01636 APH: Phosphotransfera 98.0 5E-05 1.1E-09 74.8 12.3 143 441-586 3-197 (239)
486 COG1718 RIO1 Serine/threonine 98.0 0.00012 2.7E-09 70.4 12.8 152 425-587 35-216 (268)
487 KOG2137 Protein kinase [Signal 98.0 1.5E-06 3.3E-11 93.8 -0.2 96 542-639 107-209 (700)
488 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.0002 4.4E-09 68.0 13.3 133 440-585 6-171 (199)
489 PF12260 PIP49_C: Protein-kina 97.8 0.00011 2.5E-09 69.4 9.6 105 479-587 7-112 (188)
490 PLN02876 acyl-CoA dehydrogenas 97.8 0.00029 6.3E-09 82.5 14.9 79 440-518 43-131 (822)
491 KOG0576 Mitogen-activated prot 97.8 2.7E-06 6E-11 90.8 -2.4 182 440-639 247-430 (829)
492 PF13095 FTA2: Kinetochore Sim 97.7 0.00049 1.1E-08 64.9 12.6 137 418-584 25-206 (207)
493 COG2112 Predicted Ser/Thr prot 97.7 0.00029 6.3E-09 64.1 10.3 129 439-586 26-155 (201)
494 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00042 9E-09 68.5 12.0 73 441-519 3-82 (235)
495 cd05157 ETNK_euk Ethanolamine 97.7 0.00051 1.1E-08 67.8 12.2 73 441-518 4-79 (235)
496 PRK10593 hypothetical protein; 97.6 0.001 2.2E-08 68.1 14.3 77 439-518 18-100 (297)
497 TIGR02721 ycfN_thiK thiamine k 97.5 0.00053 1.1E-08 68.7 10.5 139 442-586 3-175 (256)
498 PF03644 Glyco_hydro_85: Glyco 97.4 8E-05 1.7E-09 75.9 2.7 152 80-271 48-214 (311)
499 cd05153 HomoserineK_II Homoser 97.4 0.0027 5.8E-08 65.1 13.4 143 440-586 19-205 (296)
500 PRK09550 mtnK methylthioribose 97.3 0.0042 9.2E-08 65.6 13.8 75 441-517 32-117 (401)
No 1
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=100.00 E-value=8.7e-66 Score=523.05 Aligned_cols=285 Identities=48% Similarity=0.876 Sum_probs=255.9
Q ss_pred ceEEEEEecCCC-CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCcc
Q 006211 26 TWIKAGYWLAGR-EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTY 104 (656)
Q Consensus 26 ~~~~~~y~~~~~-~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~ 104 (656)
+.+++|||++|. .|.|++||+++||||+|||+.++++++.+...+.....+..+.+.+|++||++|+||||
T Consensus 2 ~~~~~~Y~~~w~~~~~~~~i~~~~~THi~yaf~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~lkvlisi-------- 73 (299)
T cd02879 2 TIVKGGYWPAWSEEFPPSNIDSSLFTHLFYAFADLDPSTYEVVISPSDESEFSTFTETVKRKNPSVKTLLSI-------- 73 (299)
T ss_pred CeEEEEEECCCCCCCChhHCCcccCCEEEEEEEEecCCCCEEeeccccHHHHHHHHHHHHHhCCCCeEEEEE--------
Confidence 568899999987 79999999999999999999999988788776655666777777899999999999999
Q ss_pred ccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCC-ccCcchHHHHHHHHHhhcCC------CC
Q 006211 105 QSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPN-STDLNSLGILLDEWKASASD------QP 177 (656)
Q Consensus 105 ~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~-~~d~~~~~~ll~~lr~~l~~------~~ 177 (656)
|||+.+++.|+.++++++.|++||+++++++++|||||||||||||. ++|+++|+.||++||++|+. ++
T Consensus 74 ----GG~~~~s~~fs~~~~~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~~~d~~n~~~ll~elr~~l~~~~~~~~~~ 149 (299)
T cd02879 74 ----GGGGSDSSAFAAMASDPTARKAFINSSIKVARKYGFDGLDLDWEFPSSQVEMENFGKLLEEWRAAVKDEARSSGRP 149 (299)
T ss_pred ----eCCCCCCchhhHHhCCHHHHHHHHHHHHHHHHHhCCCceeecccCCCChhHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 66666666699999999999999999999999999999999999996 47899999999999999952 24
Q ss_pred CcEEEEEeecCCCc----cccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCC
Q 006211 178 ELTLSMAVRYSPTH----ETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPA 253 (656)
Q Consensus 178 ~~~ls~a~~~~~~~----~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~ 253 (656)
+++||+++|+.+.. ...+||+++++++||||||||||+||+|....+||+|||+.+.+..+++.+|++|++.|+|+
T Consensus 150 ~~~ls~av~~~~~~~~~~~~~~yd~~~l~~~vD~i~vMtYD~~g~~~~~~~~~~a~l~~~~~~~~~~~~v~~~~~~g~p~ 229 (299)
T cd02879 150 PLLLTAAVYFSPILFLSDDSVSYPIEAINKNLDWVNVMAYDYYGSWESNTTGPAAALYDPNSNVSTDYGIKSWIKAGVPA 229 (299)
T ss_pred cEEEEeecccchhhccccccccCCHHHHHhhCCEEEEEeecccCCCCCCCCCCCCcCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 79999999877654 34568999999999999999999998765567899999998877789999999999999999
Q ss_pred CceeecccCCCCCcCCCCCcchHHHHHHHHhcCCCcccccccceeeeeeecCcEEEeeCCcchhHHHHhhhhhcccccce
Q 006211 254 NKLVLGARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYK 333 (656)
Q Consensus 254 ~Kl~lG~p~yG~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~yd~~~si~~K~~~~~~~glgGv~ 333 (656)
+||+||+|+|||+|+. ||+....+|.+.+++||+|||++|++.|++||+++||||+|
T Consensus 230 ~KlvlGvp~YGr~~~~-----------------------~D~~~~~~y~~~~~~wi~ydd~~Si~~K~~~a~~~~lgGv~ 286 (299)
T cd02879 230 KKLVLGLPLYGRAWTL-----------------------YDTTTVSSYVYAGTTWIGYDDVQSIAVKVKYAKQKGLLGYF 286 (299)
T ss_pred HHEEEEeccccccccc-----------------------cCCCcceEEEEECCEEEEeCCHHHHHHHHHHHHhCCCCeEE
Confidence 9999999999999975 67777888988899999999999999999999999999999
Q ss_pred eeEeccCccccc
Q 006211 334 AFQLSNDDNWAL 345 (656)
Q Consensus 334 ~W~l~~Dd~~~~ 345 (656)
+|++++||...+
T Consensus 287 ~W~l~~Dd~~~~ 298 (299)
T cd02879 287 AWAVGYDDNNWL 298 (299)
T ss_pred EEEeecCCcccc
Confidence 999999997654
No 2
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=100.00 E-value=2.3e-61 Score=510.38 Aligned_cols=309 Identities=25% Similarity=0.417 Sum_probs=250.4
Q ss_pred EEEEecCC---C----CCCCCCCCCCC--ccEEEEEEEEecCCCcEEecCCcchh---hHHHHHHHHHhhCCCceEEEEe
Q 006211 29 KAGYWLAG---R----EFPLSDINSAL--FTHLICAFAEVDSSTYQLSISSANQQ---YFSIFANSVRRKNPSIKTLLSI 96 (656)
Q Consensus 29 ~~~y~~~~---~----~~~~~~i~~~~--~thi~~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~k~~~~~~kvl~si 96 (656)
++|||.+| | .|.|++||+.+ ||||+|||+.|+++++.+...+.... .....+.+||++||++|||+||
T Consensus 2 vvcyy~~~a~~r~~~~~~~~~~i~~~~~~~THl~yaf~~i~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~p~lKvllSi 81 (413)
T cd02873 2 LVCYYDSKSYLREGLAKMSLEDLEPALQFCTHLVYGYAGIDADTYKIKSLNEDLDLDKSHYRAITSLKRKYPHLKVLLSV 81 (413)
T ss_pred EEEEecchhhcCCCCCeeCHHHcCCccccCCeEEEEEEEEeCCCCEEEecCcccchhhhHHHHHHHHHhhCCCCeEEEee
Confidence 47888664 2 57899999876 99999999999998877765443221 2234446799999999999999
Q ss_pred ecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc--------------------
Q 006211 97 WNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-------------------- 156 (656)
Q Consensus 97 gg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~-------------------- 156 (656)
|||+.+.- + ..++.|+.+++++++|++||+++++|+++|+|||||||||||..
T Consensus 82 GGw~~~~~----~---~~s~~fs~~~~~~~~R~~Fi~siv~~l~~~~fDGidiDWEyP~~~~~~~~g~~~~~~~~~~~~~ 154 (413)
T cd02873 82 GGDRDTDE----E---GENEKYLLLLESSESRNAFINSAHSLLKTYGFDGLDLAWQFPKNKPKKVRGTFGSAWHSFKKLF 154 (413)
T ss_pred cCCCCCCC----c---ccchhhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeEeeeeCCCCcccccccccchhhhhhhccc
Confidence 55543221 0 11446999999999999999999999999999999999999952
Q ss_pred -----------cCcchHHHHHHHHHhhcCCCCCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCC-cc
Q 006211 157 -----------TDLNSLGILLDEWKASASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKEN-VT 224 (656)
Q Consensus 157 -----------~d~~~~~~ll~~lr~~l~~~~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~-~~ 224 (656)
+|+++|+.||++||++|+ ..+++|++++++.... ...||+++|+++|||||||||||||+|+.+ .+
T Consensus 155 ~g~~~~~~~~~~d~~nf~~Ll~elr~~l~-~~~~~ls~av~~~~~~-~~~~d~~~l~~~vD~inlMtYD~~g~~~~~~~~ 232 (413)
T cd02873 155 TGDSVVDEKAAEHKEQFTALVRELKNALR-PDGLLLTLTVLPHVNS-TWYFDVPAIANNVDFVNLATFDFLTPERNPEEA 232 (413)
T ss_pred ccccccCCCChhHHHHHHHHHHHHHHHhc-ccCcEEEEEecCCchh-ccccCHHHHhhcCCEEEEEEecccCCCCCCCcc
Confidence 478999999999999994 4478999998654332 234899999999999999999999887664 58
Q ss_pred ccCCCCCCCC---CCCCHHHHHHHHHHcCCCCCceeecccCCCCCcCC---------------------------CCCcc
Q 006211 225 GIHAALYNPS---SNISTDFGIREWLRRGFPANKLVLGARASGPGITI---------------------------DGSMG 274 (656)
Q Consensus 225 g~~apl~~~~---~~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG~~~~~---------------------------~g~~~ 274 (656)
+|+|||+... ...+++.+|++|++.|+|++||+||+|+|||+|++ +|.++
T Consensus 233 ~~~apL~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~w~l~~~~~~~g~~~~~~~~g~~~~G~~~~~~g~l~ 312 (413)
T cd02873 233 DYTAPIYELYERNPHHNVDYQVKYWLNQGTPASKLNLGIATYGRAWKLTKDSGITGVPPVLETDGPGPAGPQTKTPGLLS 312 (413)
T ss_pred CcCCccCCCccccccccHHHHHHHHHHcCCCHHHeEEEEecceeeeEccCCCCCcCCCCCccCCCCCCCCCCcCCCcccc
Confidence 9999999643 24689999999999999999999999999999952 14579
Q ss_pred hHHHHHHHHhcCC------Cccccccccee-eeeeec-------CcEEEeeCCcchhHHHHhhhhhcccccceeeEeccC
Q 006211 275 YKFIRAFIQNYGY------GAAPVYNASYV-VNLFTS-------GATWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340 (656)
Q Consensus 275 y~~i~~~~~~~~~------~~~~~~d~~~~-~~~~~~-------~~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~D 340 (656)
|.|||..+...++ .++..||.... .+|.+. .++||+|||++|++.|++||+++||||+|+|++++|
T Consensus 313 y~ei~~~~~~~~~~~g~~~~~~~~~d~~~~~~~y~y~~~d~~~~~~~wvsydd~~Si~~K~~y~~~~gLgGv~~W~l~~D 392 (413)
T cd02873 313 WPEICSKLPNPANLKGADAPLRKVGDPTKRFGSYAYRPADENGEHGIWVSYEDPDTAANKAGYAKAKGLGGVALFDLSLD 392 (413)
T ss_pred HHHHHHhhccCccccccccceeEeecccccccceEEeccccCCCCCeEEEeCCHHHHHHHHHHHHhCCCceEEEEeeecC
Confidence 9999987765321 24556777654 366552 257999999999999999999999999999999999
Q ss_pred cccccc
Q 006211 341 DNWALS 346 (656)
Q Consensus 341 d~~~~~ 346 (656)
|..+.|
T Consensus 393 D~~g~c 398 (413)
T cd02873 393 DFRGQC 398 (413)
T ss_pred cCCCCc
Confidence 988876
No 3
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-61 Score=478.19 Aligned_cols=306 Identities=24% Similarity=0.362 Sum_probs=243.8
Q ss_pred cceEEEEEecCCCC-----CCCCCCCCCCccEEEEEEEEecCCCcEEe-------------------cCCcch--hhHHH
Q 006211 25 QTWIKAGYWLAGRE-----FPLSDINSALFTHLICAFAEVDSSTYQLS-------------------ISSANQ--QYFSI 78 (656)
Q Consensus 25 ~~~~~~~y~~~~~~-----~~~~~i~~~~~thi~~~f~~~~~~~~~~~-------------------~~~~~~--~~~~~ 78 (656)
.+.+++|||++|++ |.|.+||++++|||+|||+.|+.++.... .+.+.+ .....
T Consensus 36 ~~~rvvgYY~sWs~~d~~~y~~~DIp~~qlTHInYAF~~I~~~g~~~~~~~~~~~~~~~~~~~~~~e~dp~~~~~~G~~~ 115 (441)
T COG3325 36 DQFKVVGYYTSWSQYDRQDYFPGDIPLDQLTHINYAFLDINSDGKSIESWVADEAALYGVPNIEGVELDPWSDPLKGHFG 115 (441)
T ss_pred CCceEEEEecccccCCCcccccccCCHHHhceeeEEEEEecCCCCccccccccchhhccccCcCceeeccccccccchHH
Confidence 45688999998864 77899999999999999999998874211 000111 11233
Q ss_pred HHHHHHhhCCCceEEEEeecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc--
Q 006211 79 FANSVRRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156 (656)
Q Consensus 79 ~~~~~k~~~~~~kvl~sigg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~-- 156 (656)
....+|+++|++|+++|||||+.|.. |+.|+.++++|++|++|+++|+++|+|||||||||||++
T Consensus 116 ~L~~lk~~~~d~k~l~SIGGWs~S~~-------------F~~~aad~a~re~Fa~saVe~~r~~~FDGVDIDWEYP~~~~ 182 (441)
T COG3325 116 ALFDLKATYPDLKTLISIGGWSDSGG-------------FSDMAADDASRENFAKSAVEFMRTYGFDGVDIDWEYPGSGG 182 (441)
T ss_pred HHHHHhhhCCCceEEEeecccccCCC-------------cchhhcCHHHHHHHHHHHHHHHHhcCCCceeeccccCCCCC
Confidence 44789999999999999955555444 999999999999999999999999999999999999954
Q ss_pred --------cCcchHHHHHHHHHhhcCC-----CCCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCc
Q 006211 157 --------TDLNSLGILLDEWKASASD-----QPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENV 223 (656)
Q Consensus 157 --------~d~~~~~~ll~~lr~~l~~-----~~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~ 223 (656)
.|+++|+.||++||++|+. ++++.||+|.|+.+.... +.+..+++++|||||+|||||||+ |..+
T Consensus 183 ~~~~~~~~~d~~ny~~Ll~eLR~~LD~a~~edgr~Y~LTiA~~as~~~l~-~~~~~~~~~~vDyiNiMTYDf~G~-Wn~~ 260 (441)
T COG3325 183 DAGNCGRPKDKANYVLLLQELRKKLDKAGVEDGRHYQLTIAAPASKDKLE-GLNHAEIAQYVDYINIMTYDFHGA-WNET 260 (441)
T ss_pred CCCCCCCcccHHHHHHHHHHHHHHHhhcccccCceEEEEEecCCchhhhh-cccHHHHHHHHhhhheeeeecccc-cccc
Confidence 4789999999999999943 457999999999988877 589999999999999999999974 8999
Q ss_pred cccCCCCCCCCCC-------CCH------HHHHHHHHHcCCCCCceeecccCCCCCcCCC--CC----------------
Q 006211 224 TGIHAALYNPSSN-------IST------DFGIREWLRRGFPANKLVLGARASGPGITID--GS---------------- 272 (656)
Q Consensus 224 ~g~~apl~~~~~~-------~~~------~~~v~~~~~~g~p~~Kl~lG~p~yG~~~~~~--g~---------------- 272 (656)
+|||||||..+.+ +.+ ...++.....++||+|||||+|+|||+|... +.
T Consensus 261 ~Gh~a~Ly~~~~d~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~klvlG~p~YgRgw~~v~~~~~~~~~~~~q~~~n~g~ 340 (441)
T COG3325 261 LGHHAALYGTPKDPPLANGGFYVDAEVDGIDWLEEGFAGDVPPSKLVLGMPFYGRGWNGVDGGSLGTCPGLYQGLDNSGI 340 (441)
T ss_pred cccccccccCCCCCccccCCeeEEEEechhHHHHhhhccCCCCceEEeeccccccccccccCcccCCCCCcccccCCCCC
Confidence 9999999953321 122 2355666677899999999999999999542 00
Q ss_pred -----------cchH--HHHHHHHhcCCCcccccccceeeeeeec--CcEEEeeCCcchhHHHHhhhhhcccccceeeEe
Q 006211 273 -----------MGYK--FIRAFIQNYGYGAAPVYNASYVVNLFTS--GATWINFDGVETIKAKISYAKEKNLLGYKAFQL 337 (656)
Q Consensus 273 -----------~~y~--~i~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l 337 (656)
..|. -.......+..++.+.||..+..||.++ ++.||+|||++|+++|++||+++||||+|+|++
T Consensus 341 ~~Gtw~a~n~~~~~~~~~~l~~n~~~~~g~~~~~d~~a~apyL~n~~~~vFiSyDd~rSvkaK~eYv~~n~LGG~m~We~ 420 (441)
T COG3325 341 PKGTWEAGNGDKDYGKAYDLDANNAGKNGYERYWDDVAKAPYLYNPEKGVFISYDDPRSVKAKAEYVADNNLGGMMFWEI 420 (441)
T ss_pred CCCcccccccCccchhhccccccccCCCCeeEecccccccceeecCCCCeEEEccCCcchhhHHHHHhhcCccceEEEEe
Confidence 0110 0111112233567889999999999775 578999999999999999999999999999999
Q ss_pred ccCccccc
Q 006211 338 SNDDNWAL 345 (656)
Q Consensus 338 ~~Dd~~~~ 345 (656)
++|-+.-+
T Consensus 421 sgD~n~~l 428 (441)
T COG3325 421 SGDENGVL 428 (441)
T ss_pred cCCcchhH
Confidence 99943333
No 4
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=100.00 E-value=4.8e-61 Score=505.94 Aligned_cols=303 Identities=31% Similarity=0.523 Sum_probs=262.7
Q ss_pred EEEEecCCC-------CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcc--hhhHHHHHHHHHhhCCCceEEEEeecC
Q 006211 29 KAGYWLAGR-------EFPLSDINSALFTHLICAFAEVDSSTYQLSISSAN--QQYFSIFANSVRRKNPSIKTLLSIWNG 99 (656)
Q Consensus 29 ~~~y~~~~~-------~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~--~~~~~~~~~~~k~~~~~~kvl~sigg~ 99 (656)
++|||+.|. .|.+++||+++||||+|+|+.+++++......... .......+.++|++||++||++||
T Consensus 1 v~~y~~~w~~~~~~~~~~~~~~i~~~~~Thv~y~f~~i~~~g~~~~~~~~~d~~~~~~~~~~~lk~~~p~lkvlisi--- 77 (362)
T cd02872 1 VVCYFTNWAQYRPGNGKFVPENIDPFLCTHIIYAFAGLNPDGNIIILDEWNDIDLGLYERFNALKEKNPNLKTLLAI--- 77 (362)
T ss_pred CEEEECcchhcCCCCCCcChhHCCcccCCEEEEeeEEECCCCCEEecCchhhhhhhHHHHHHHHHhhCCCceEEEEE---
Confidence 367887643 48899999999999999999999986555443332 233344446799999999999999
Q ss_pred CCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc-----cCcchHHHHHHHHHhhcC
Q 006211 100 QNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-----TDLNSLGILLDEWKASAS 174 (656)
Q Consensus 100 ~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~-----~d~~~~~~ll~~lr~~l~ 174 (656)
|||+.++..|+.++++++.|++||+++++++++|+|||||||||||.. +|+++|+.||++||++|+
T Consensus 78 ---------GG~~~~~~~f~~~~~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p~~~~~~~~d~~~~~~ll~~lr~~l~ 148 (362)
T cd02872 78 ---------GGWNFGSAKFSAMAASPENRKTFIKSAIAFLRKYGFDGLDLDWEYPGQRGGPPEDKENFVTLLKELREAFE 148 (362)
T ss_pred ---------cCCCCCcchhHHHhCCHHHHHHHHHHHHHHHHHcCCCCeeeeeeccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 777766667999999999999999999999999999999999999974 789999999999999994
Q ss_pred CC-CCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCC------CCCHHHHHHHHH
Q 006211 175 DQ-PELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSS------NISTDFGIREWL 247 (656)
Q Consensus 175 ~~-~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~------~~~~~~~v~~~~ 247 (656)
+. ++++||+++|+.+.....+||+++|.++||+|||||||++|+ |+..+||+|||+..+. ..+++.+|++|+
T Consensus 149 ~~~~~~~ls~av~~~~~~~~~~~d~~~l~~~vD~v~vmtYD~~~~-~~~~~g~~spl~~~~~~~~~~~~~~v~~~v~~~~ 227 (362)
T cd02872 149 PEAPRLLLTAAVSAGKETIDAAYDIPEISKYLDFINVMTYDFHGS-WEGVTGHNSPLYAGSADTGDQKYLNVDYAIKYWL 227 (362)
T ss_pred hhCcCeEEEEEecCChHHHhhcCCHHHHhhhcceEEEecccCCCC-CCCCCCCCCCCCCCCCCccccccccHHHHHHHHH
Confidence 32 379999999988766666799999999999999999999976 6778999999996443 358999999999
Q ss_pred HcCCCCCceeecccCCCCCcCCC------------------------CCcchHHHHHHHHhcCCCcccccccceeeeeee
Q 006211 248 RRGFPANKLVLGARASGPGITID------------------------GSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFT 303 (656)
Q Consensus 248 ~~g~p~~Kl~lG~p~yG~~~~~~------------------------g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~ 303 (656)
+.|+|++||+||+|+||++|+.. |.++|.|||+.+ . .+++..||+.+..||.+
T Consensus 228 ~~gvp~~KlvlGlp~YG~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~g~~~y~ei~~~~-~--~~~~~~~D~~~~~~y~~ 304 (362)
T cd02872 228 SKGAPPEKLVLGIPTYGRSFTLASPSNTGVGAPASGPGTAGPYTREAGFLAYYEICEFL-K--SGWTVVWDDEQKVPYAY 304 (362)
T ss_pred HcCCCHHHeEeccccccceeeecCCccCCCCCccCCCCCCCCCcCCCccchHHHHHHhh-c--CCcEEEEeCCcceeEEE
Confidence 99999999999999999998542 356899999876 3 35899999999999998
Q ss_pred cCcEEEeeCCcchhHHHHhhhhhcccccceeeEeccCcccccch
Q 006211 304 SGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDDNWALSR 347 (656)
Q Consensus 304 ~~~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~Dd~~~~~~ 347 (656)
.+++||+|||++|++.|++||+++||||+++|++++||..+.|.
T Consensus 305 ~~~~~v~ydd~~Si~~K~~~~~~~~lgGv~iW~l~~DD~~g~cg 348 (362)
T cd02872 305 KGNQWVGYDDEESIALKVQYLKSKGLGGAMVWSIDLDDFRGTCG 348 (362)
T ss_pred ECCEEEEeCCHHHHHHHHHHHHhCCCceEEEEeeecCcCCCccC
Confidence 89999999999999999999999999999999999999988864
No 5
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=100.00 E-value=1.2e-60 Score=492.48 Aligned_cols=278 Identities=29% Similarity=0.450 Sum_probs=239.5
Q ss_pred EEEEecCCCCC----CCC-CCCCCCccEEEEEEEEecCCCcEEecCCc------------------chhhHHHHHHHHHh
Q 006211 29 KAGYWLAGREF----PLS-DINSALFTHLICAFAEVDSSTYQLSISSA------------------NQQYFSIFANSVRR 85 (656)
Q Consensus 29 ~~~y~~~~~~~----~~~-~i~~~~~thi~~~f~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~k~ 85 (656)
++|||++|..+ .+. +||+++||||+|||+.|++++..+...+. ........+..+|+
T Consensus 1 v~~Y~~~W~~~~~~~~~~~~i~~~~~THl~yaf~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~ 80 (322)
T cd06548 1 VVGYFTNWGIYGRNYFVTDDIPADKLTHINYAFADIDGDGGVVTSDDEAADEAAQSVDGGADTDDQPLKGNFGQLRKLKQ 80 (322)
T ss_pred CEEEeCCCcccCCCCCcccCCChhHCcEEEEEeeeEcCCCCeEccChhhhhhccccCCcccccCCccchhHHHHHHHHHH
Confidence 37899887654 444 69999999999999999998776653321 11122233467999
Q ss_pred hCCCceEEEEeecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc---------
Q 006211 86 KNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS--------- 156 (656)
Q Consensus 86 ~~~~~kvl~sigg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~--------- 156 (656)
+||++|||+|| |||+.+ ..|+.++++++.|++||+++++++++|+|||||||||||..
T Consensus 81 ~~p~lkvl~si------------GG~~~s-~~f~~~~~~~~~r~~Fi~siv~~l~~~~fDGidiDwE~p~~~~~~~~~~~ 147 (322)
T cd06548 81 KNPHLKILLSI------------GGWTWS-GGFSDAAATEASRAKFADSAVDFIRKYGFDGIDIDWEYPGSGGAPGNVAR 147 (322)
T ss_pred hCCCCEEEEEE------------eCCCCC-CCchhHhCCHHHHHHHHHHHHHHHHhcCCCeEEECCcCCCCCCCCCCCCC
Confidence 99999999999 555443 34999999999999999999999999999999999999964
Q ss_pred -cCcchHHHHHHHHHhhcCC-----CCCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCC
Q 006211 157 -TDLNSLGILLDEWKASASD-----QPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAAL 230 (656)
Q Consensus 157 -~d~~~~~~ll~~lr~~l~~-----~~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl 230 (656)
+|+++|+.||++||++|+. +++++||+++|+.+..... +++++++++||+||||||||||+ |+..+||+|||
T Consensus 148 ~~d~~~~~~ll~~Lr~~l~~~~~~~~~~~~Ls~av~~~~~~~~~-~~~~~l~~~vD~vnlMtYD~~g~-w~~~~g~~spL 225 (322)
T cd06548 148 PEDKENFTLLLKELREALDALGAETGRKYLLTIAAPAGPDKLDK-LEVAEIAKYLDFINLMTYDFHGA-WSNTTGHHSNL 225 (322)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhccCCceEEEEEccCCHHHHhc-CCHHHHhhcCCEEEEEEeeccCC-CCCCCCCCCCC
Confidence 6889999999999999954 2469999999987765544 78999999999999999999976 56789999999
Q ss_pred CCCC----CCCCHHHHHHHHHHcCCCCCceeecccCCCCCcCCCCCcchHHHHHHHHhcCCCcccccccceeeeeeecC-
Q 006211 231 YNPS----SNISTDFGIREWLRRGFPANKLVLGARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTSG- 305 (656)
Q Consensus 231 ~~~~----~~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~- 305 (656)
+... ...+++.+|++|++.|+|++||+||+|+||++|+. +...||+.+..||.+++
T Consensus 226 ~~~~~~~~~~~~v~~~v~~~~~~gvp~~KlvlGip~YGr~~~~-------------------~~~~~D~~~~~~y~~~~~ 286 (322)
T cd06548 226 YASPADPPGGYSVDAAVNYYLSAGVPPEKLVLGVPFYGRGWTG-------------------YTRYWDEVAKAPYLYNPS 286 (322)
T ss_pred CCCCCCCCCCccHHHHHHHHHHcCCCHHHeEEEecccccccCC-------------------cEEEEcCCcceeEEEeCC
Confidence 9654 35789999999999999999999999999999986 56789999999998877
Q ss_pred -cEEEeeCCcchhHHHHhhhhhcccccceeeEeccC
Q 006211 306 -ATWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340 (656)
Q Consensus 306 -~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~D 340 (656)
++||+|||++||+.|++||+++||||+|+|++++|
T Consensus 287 ~~~~v~ydd~~Si~~K~~~a~~~~LgGv~~W~l~~D 322 (322)
T cd06548 287 TKTFISYDDPRSIKAKADYVKDKGLGGVMFWELSGD 322 (322)
T ss_pred CCeEEEeCCHHHHHHHHHHHHhcCCccEEEEeccCC
Confidence 89999999999999999999999999999999998
No 6
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-60 Score=504.69 Aligned_cols=305 Identities=25% Similarity=0.445 Sum_probs=266.1
Q ss_pred EEEEEecCCC-CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCcccc
Q 006211 28 IKAGYWLAGR-EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQS 106 (656)
Q Consensus 28 ~~~~y~~~~~-~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~~ 106 (656)
.++||++++. ...++++++++|||++|||+.++.++......+.....+....+.+|.+||+||+|+||
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~TH~vfafa~~~~~~~~~~~~~~~~~~f~~~~~~~k~~n~~vK~llSI---------- 128 (432)
T KOG2806|consen 59 SIVGYYPSRIGPETLEDQDPLKCTHLVYAFAKMKRVGYVVFCGARTMNRFSSYNQTAKSSNPTVKVMISI---------- 128 (432)
T ss_pred eeEEEeCCCCCCCCccccChhhcCcceEEEeeecccccEEeccchhhhhhHHHHHHHHhhCCCceEEEEe----------
Confidence 4588888887 88999999999999999999999998888777766778888889999999999999999
Q ss_pred ccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCC--CccCcchHHHHHHHHHhhcCCCC------C
Q 006211 107 ILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWP--NSTDLNSLGILLDEWKASASDQP------E 178 (656)
Q Consensus 107 ~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p--~~~d~~~~~~ll~~lr~~l~~~~------~ 178 (656)
|||..+++.|+.|++|++.|++||+|+++|+++|+||||||||||| ...|+.+|..|++|||++|.+.. .
T Consensus 129 --GG~~~ns~~fs~~~s~~~~r~~FI~Sii~fl~~~~fDGvDL~We~P~~~~~d~~~~~~~i~elr~~~~~~~~~~~~~~ 206 (432)
T KOG2806|consen 129 --GGSHGNSGLFSLVLSDRMIRAKFIESVVSFIKDYGFDGVDLAWEWPLFTPSDQLEFSRFIQELRSAFARETLKSPDTA 206 (432)
T ss_pred --cCCCCCccchhhhhcChHHHHHHHHHHHHHHHHcCCCceeeeeECCCCchhhHHHHHHHHHHHHHHHHHHhhccCCcc
Confidence 4443333349999999999999999999999999999999999999 77899999999999999994321 2
Q ss_pred cEEEEEeecCCC-ccccccChhhhhhccchhhhhhhcccCCCCCC-ccccCCCCCCCC----CCCCHHHHHHHHHHcCCC
Q 006211 179 LTLSMAVRYSPT-HETVSYPIDSMKKNLNWAHLVAYDYHMPSKEN-VTGIHAALYNPS----SNISTDFGIREWLRRGFP 252 (656)
Q Consensus 179 ~~ls~a~~~~~~-~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~-~~g~~apl~~~~----~~~~~~~~v~~~~~~g~p 252 (656)
.+|+.++.+++. ....+||+++|+++|||||||+|||+|+|+++ .+||+||||.+. ..+|++.++++|++.|.|
T Consensus 207 ~~l~~~v~~~~~~~~~~~ydi~~i~~~~DfiNi~syDf~gpw~~~~~tGp~aPl~~~~~~~~~~~Nvd~~~ky~~~~~~~ 286 (432)
T KOG2806|consen 207 KVLEAVVADSKQSAYSDGYDYENLSKYVDFINIMSYDYYGPWSLPCFTGPPSPLYKGPSMTNPKMNVDSLLKYWTEKGLP 286 (432)
T ss_pred ceeeeccccCccchhhccCCHHHHHhhCCeEEEecccccCCCcCCCcCCCCcccCCCCcccccCcchhhhHHHHhhcCCC
Confidence 245555555544 67888999999999999999999999986553 799999999753 347999999999999999
Q ss_pred CCceeecccCCCCCcCC------------------------CCCcchHHHHHHHHhcCCCcccccccceeeeeeec--Cc
Q 006211 253 ANKLVLGARASGPGITI------------------------DGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTS--GA 306 (656)
Q Consensus 253 ~~Kl~lG~p~yG~~~~~------------------------~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~--~~ 306 (656)
++|++||+|+||+.|++ .|.++|.|||+...+.+ ...||+..+.||.+. ++
T Consensus 287 ~~Kl~~gip~yg~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ls~~ei~~~~~~~~---~~~~d~~~~~~Y~~~~~~~ 363 (432)
T KOG2806|consen 287 PSKLVLALPFYGRSWQLLEDSRSSAAPPFGQAAPVSMRSKGGGYMSYPEICERKINTG---VTHWDEETQTPYLYNIPYD 363 (432)
T ss_pred chheEEEEecceehhhhcCCcCCCCCccCCCcccCccccccCceeeHHHHHHHhcccC---CceecCCceeeeEEecCCC
Confidence 99999999999999954 25689999999544333 678999999999999 99
Q ss_pred EEEeeCCcchhHHHHhhhhhcccccceeeEeccCcccccch
Q 006211 307 TWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDDNWALSR 347 (656)
Q Consensus 307 ~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~Dd~~~~~~ 347 (656)
+||+|||++||+.|++||+++||||+|+|++++||..+.+.
T Consensus 364 ~wvtyen~~Si~~K~~Yvk~~~lGGv~iW~vd~DD~~~~~~ 404 (432)
T KOG2806|consen 364 QWVTYENERSIHIKADYAKDEGLGGVAIWNIDQDDESGSLL 404 (432)
T ss_pred eEEecCCHHHHHHHHHHHHhcCCceEEEEeccCCCCCCccc
Confidence 99999999999999999999999999999999999888744
No 7
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin is a heterotrimeric enzyme that inhibits yeast cell cycle progression. The zymocin alpha subunit has a chitinase activity that is essential for holoenzyme action from the cell exterior while the gamma subunit contains the intracellular toxin responsible for G1 phase cell cycle arrest. The zymocin alpha and beta subunits are thought to act from the cell's exterior by docking to the cell wall-associated chitin, thus mediating gamma-toxin translocation. The alpha subunit has an eight-stranded TIM barrel fold similar to that of family 18 glycosyl hydrolases such as hevamine, chitolectin, and chitobiase.
Probab=100.00 E-value=2e-57 Score=471.20 Aligned_cols=292 Identities=20% Similarity=0.303 Sum_probs=231.6
Q ss_pred EEEEecCCC------CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCC
Q 006211 29 KAGYWLAGR------EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNS 102 (656)
Q Consensus 29 ~~~y~~~~~------~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~ 102 (656)
++|||++|. .|.|++||+++||||+|+|+.++++ +.+...+ ....+..+ .++| ++|||+|||||+.|
T Consensus 2 ~v~Y~~~w~~~r~~~~~~~~~i~~~~~THi~yaf~~~~~~-g~l~~~~-~~~~~~~~-~~~k----~lkvllsiGG~~~s 74 (345)
T cd02878 2 NIAYFEAYNLDRPCLNMDVTQIDTSKYTHIHFAFANITSD-FSVDVSS-VQEQFSDF-KKLK----GVKKILSFGGWDFS 74 (345)
T ss_pred EEEEEChhhcCCCCCCCCHhHCCcccCCEEEEEeEeecCC-CeEeecc-cHHHHHHH-Hhhc----CcEEEEEEeCCCCC
Confidence 589998873 4789999999999999999999987 4555432 22333332 2232 39999999555433
Q ss_pred ccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc-----------cCcchHHHHHHHHHh
Q 006211 103 TYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-----------TDLNSLGILLDEWKA 171 (656)
Q Consensus 103 ~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~-----------~d~~~~~~ll~~lr~ 171 (656)
.. .. ....|+.++ ++++|++||+++++++++|+|||||||||||.. +|+++|+.||++||+
T Consensus 75 ~~----~~---~~~~f~~~~-~~~~R~~Fi~si~~~~~~~~fDGidiDwE~P~~~~~~~~~~~~~~d~~n~~~ll~elr~ 146 (345)
T cd02878 75 TS----PS---TYQIFRDAV-KPANRDTFANNVVNFVNKYNLDGVDFDWEYPGAPDIPGIPAGDPDDGKNYLEFLKLLKS 146 (345)
T ss_pred CC----Cc---cchhhHhhc-CHHHHHHHHHHHHHHHHHcCCCceeecccCCcccCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 21 00 012488888 999999999999999999999999999999952 478999999999999
Q ss_pred hcCCCCCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCC-------CCCCCCHHHHHH
Q 006211 172 SASDQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYN-------PSSNISTDFGIR 244 (656)
Q Consensus 172 ~l~~~~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~-------~~~~~~~~~~v~ 244 (656)
+|++ +++||+++|+.+... .+||+++++++|||||||||||||+ |+..+++++|... .....++..+|+
T Consensus 147 ~l~~--~~~ls~a~~~~~~~~-~~yd~~~l~~~vD~i~vMtYD~~g~-w~~~~~~~~p~~p~~~~~~~~~~~~~~~~~v~ 222 (345)
T cd02878 147 KLPS--GKSLSIAAPASYWYL-KGFPIKDMAKYVDYIVYMTYDLHGQ-WDYGNKWASPGCPAGNCLRSHVNKTETLDALS 222 (345)
T ss_pred HhCc--CcEEEEEcCCChhhh-cCCcHHHHHhhCcEEEEEeecccCC-cCccCCcCCCCCCcccccccCCCchhHHHHHH
Confidence 9954 689999998876543 3599999999999999999999976 5655666665221 112235889999
Q ss_pred HHHHcCCCCCceeecccCCCCCcCCC------------------------CC---cchHHHHHHHHhcCCCcccccccce
Q 006211 245 EWLRRGFPANKLVLGARASGPGITID------------------------GS---MGYKFIRAFIQNYGYGAAPVYNASY 297 (656)
Q Consensus 245 ~~~~~g~p~~Kl~lG~p~yG~~~~~~------------------------g~---~~y~~i~~~~~~~~~~~~~~~d~~~ 297 (656)
+|+++|+|++||+||+|+|||+|++. +. +.|.|+|...... .+++..||...
T Consensus 223 ~~~~~Gvp~~KlvlGip~YGr~~~l~~~~~~~~~~p~~g~~~~~~~g~~~~~~g~~~~~e~~~~~~~~-~~~~~~~d~~~ 301 (345)
T cd02878 223 MITKAGVPSNKVVVGVASYGRSFKMADPGCTGPGCTFTGPGSGAEAGRCTCTAGYGAISEIEIIDISK-SKNKRWYDTDS 301 (345)
T ss_pred HHHHcCCCHHHeEEeeccccceeeccCCCCCCCCCcccCCCCCCCCCCCCCchhhhhHHHHHHHHhcc-CCCcEEEecCC
Confidence 99999999999999999999999632 12 2348888755433 35899999999
Q ss_pred eeeee-ecCcEEEeeCCcchhHHHHhhhhhcccccceeeEeccC
Q 006211 298 VVNLF-TSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340 (656)
Q Consensus 298 ~~~~~-~~~~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~D 340 (656)
.+||. +.+++||+|||++|++.|++||+++||||+|+|++|+|
T Consensus 302 ~~~y~~~~~~~wv~ydd~~Si~~K~~y~~~~~LgGv~~W~ld~~ 345 (345)
T cd02878 302 DSDILVYDDDQWVAYMSPATKAARIEWYKGLNFGGTSDWAVDLQ 345 (345)
T ss_pred CccEEEEcCCEEEEcCCHHHHHHHHHHHHhCCCceEEEeeccCC
Confidence 99985 56779999999999999999999999999999999987
No 8
>smart00636 Glyco_18 Glycosyl hydrolase family 18.
Probab=100.00 E-value=4.3e-57 Score=471.52 Aligned_cols=291 Identities=32% Similarity=0.583 Sum_probs=251.7
Q ss_pred EEEEecCCC----CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchh--hHHHHHHHHHhhCCCceEEEEeecCCCC
Q 006211 29 KAGYWLAGR----EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQ--YFSIFANSVRRKNPSIKTLLSIWNGQNS 102 (656)
Q Consensus 29 ~~~y~~~~~----~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~k~~~~~~kvl~sigg~~~~ 102 (656)
++|||.+|. .|.++++|.++||||+|+|+.+++++ .+...+...+ .+.. +..+|++||++|+|+||
T Consensus 2 ~~~Y~~~w~~~~~~~~~~~~~~~~~thv~~~~~~~~~~g-~~~~~~~~~~~~~~~~-~~~l~~~~~~~kvl~sv------ 73 (334)
T smart00636 2 VVGYFTNWGVYGRNFPVDDIPASKLTHIIYAFANIDPDG-TVTIGDEWADIGNFGQ-LKALKKKNPGLKVLLSI------ 73 (334)
T ss_pred EEEEECchhccCCCCChhHCCcccCcEEEEeeeeeCCCC-CEeeCCcchhhhhHHH-HHHHHHhCCCCEEEEEE------
Confidence 589998876 38899999999999999999999964 4554433332 3444 46799999999999999
Q ss_pred ccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc--cCcchHHHHHHHHHhhcCC----C
Q 006211 103 TYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS--TDLNSLGILLDEWKASASD----Q 176 (656)
Q Consensus 103 ~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~--~d~~~~~~ll~~lr~~l~~----~ 176 (656)
|||.. +..|+.++++++.|++||+++++++++|+|||||||||+|.. +|+++|+.|+++||++|++ +
T Consensus 74 ------gg~~~-s~~f~~~~~~~~~r~~fi~~i~~~~~~~~~DGidiDwE~~~~~~~d~~~~~~ll~~lr~~l~~~~~~~ 146 (334)
T smart00636 74 ------GGWTE-SDNFSSMLSDPASRKKFIDSIVSFLKKYGFDGIDIDWEYPGARGDDRENYTALLKELREALDKEGAEG 146 (334)
T ss_pred ------eCCCC-CcchhHHHCCHHHHHHHHHHHHHHHHHcCCCeEEECCcCCCCCccHHHHHHHHHHHHHHHHHHhcccC
Confidence 55554 244999999999999999999999999999999999999987 6899999999999999964 3
Q ss_pred CCcEEEEEeecCCCccccccC-hhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCC---CCCHHHHHHHHHHcCCC
Q 006211 177 PELTLSMAVRYSPTHETVSYP-IDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSS---NISTDFGIREWLRRGFP 252 (656)
Q Consensus 177 ~~~~ls~a~~~~~~~~~~~~~-~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~---~~~~~~~v~~~~~~g~p 252 (656)
++++||+++|+.+......|+ +++++++||+||||+||+|++ |+..+||+|||+.... ..+++.+|++|++.|+|
T Consensus 147 ~~~~lsi~v~~~~~~~~~~~~~~~~l~~~vD~v~vm~YD~~~~-~~~~~g~~spl~~~~~~~~~~~v~~~v~~~~~~gvp 225 (334)
T smart00636 147 KGYLLTIAVPAGPDKIDKGYGDLPAIAKYLDFINLMTYDFHGA-WSNPTGHNAPLYAGPGDPEKYNVDYAVKYYLCKGVP 225 (334)
T ss_pred CceEEEEEecCChHHHHhhhhhHHHHHhhCcEEEEeeeccCCC-CCCCCCCCCcCCCCCCCCCCccHHHHHHHHHHcCCC
Confidence 689999999987665555688 599999999999999999975 6778999999996543 45899999999999999
Q ss_pred CCceeecccCCCCCcCC------------------------CCCcchHHHHHHHHhcCCCcccccccceeeeeeec-C-c
Q 006211 253 ANKLVLGARASGPGITI------------------------DGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTS-G-A 306 (656)
Q Consensus 253 ~~Kl~lG~p~yG~~~~~------------------------~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~-~-~ 306 (656)
++||+||+|+||+.|+. +|.++|.|||... ++...||+....||.+. + +
T Consensus 226 ~~KlvlGip~YG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~y~ei~~~~-----~~~~~~d~~~~~~y~~~~~~~ 300 (334)
T smart00636 226 PSKLVLGIPFYGRGWTLVDGSNNGPGAPFTGPATGGPGTWEGGVVDYREICKLL-----GATVVWDDTAKAPYAYNPGTG 300 (334)
T ss_pred HHHeEEeeccccCccccCCCCcCCCCCcccCCCCCCCCCCcccchhHHHHHhhc-----CcEEEEcCCCceeEEEECCCC
Confidence 99999999999999854 2457899999864 58899999999999776 3 5
Q ss_pred EEEeeCCcchhHHHHhhhhhcccccceeeEeccC
Q 006211 307 TWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340 (656)
Q Consensus 307 ~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~D 340 (656)
+||+|||++|++.|++||+++||||+|+|++++|
T Consensus 301 ~~v~ydd~~Si~~K~~~~~~~~lgGv~iW~l~~D 334 (334)
T smart00636 301 QWVSYDDPRSIKAKADYVKDKGLGGVMIWELDAD 334 (334)
T ss_pred EEEEcCCHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 9999999999999999999999999999999998
No 9
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=100.00 E-value=7.6e-54 Score=441.61 Aligned_cols=287 Identities=17% Similarity=0.234 Sum_probs=237.6
Q ss_pred EEEEecCCC--CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEE--EEeecCCCCcc
Q 006211 29 KAGYWLAGR--EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTL--LSIWNGQNSTY 104 (656)
Q Consensus 29 ~~~y~~~~~--~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl--~sigg~~~~~~ 104 (656)
++|||+.|. .|.+.+++.++||||+|+|+.++++++.+...+..+ .-...+..+|++||++||+ +++
T Consensus 5 ~~~y~~~W~~~~~~~~~~~~~~lthv~~~f~~i~~~g~~~~~~~~~~-~~~~~~~~lk~~~~~lkvlp~i~~-------- 75 (318)
T cd02876 5 VLGYVTPWNSHGYDVAKKFAAKFTHVSPVWLQIKRKGNKFVIEGTHD-IDKGWIEEVRKANKNIKILPRVLF-------- 75 (318)
T ss_pred eEEEEcCcCccchHHHHHHhccCCEecceEEEEecCCCeeeeecCcc-hhhHHHHHHHhhCCCcEEEeEEEE--------
Confidence 578998876 467899999999999999999998876555443222 1223457899999999999 566
Q ss_pred ccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceee-eeCCCc----cCcchHHHHHHHHHhhcCCCCCc
Q 006211 105 QSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLF-WLWPNS----TDLNSLGILLDEWKASASDQPEL 179 (656)
Q Consensus 105 ~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdid-we~p~~----~d~~~~~~ll~~lr~~l~~~~~~ 179 (656)
|||+.+ .|+.++++++.|++||+++++++++||||||||| ||||.. +|+++|+.||++||++|++ .++
T Consensus 76 ----gg~~~~--~f~~~~~~~~~R~~fi~s~~~~~~~~~~DGidiD~we~p~~~~~~~d~~~~~~~l~el~~~l~~-~~~ 148 (318)
T cd02876 76 ----EGWSYQ--DLQSLLNDEQEREKLIKLLVTTAKKNHFDGIVLEVWSQLAAYGVPDKRKELIQLVIHLGETLHS-ANL 148 (318)
T ss_pred ----CCCCHH--HHHHHHcCHHHHHHHHHHHHHHHHHcCCCcEEEechhhhcccCCHHHHHHHHHHHHHHHHHHhh-cCC
Confidence 565433 4899999999999999999999999999999999 999975 3899999999999999954 478
Q ss_pred EEEEEeecCCCc-----cccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcC-CCC
Q 006211 180 TLSMAVRYSPTH-----ETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRG-FPA 253 (656)
Q Consensus 180 ~ls~a~~~~~~~-----~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g-~p~ 253 (656)
.+++++|+.... ....||+++|+++||||||||||+||+ +.+||+|||+ +++.+++++++.| +|+
T Consensus 149 ~l~~~v~~~~~~~~~~~~~~~~d~~~l~~~vD~v~lMtYD~~~~---~~~g~~apl~------~v~~~v~~~~~~~~vp~ 219 (318)
T cd02876 149 KLILVIPPPREKGNQNGLFTRKDFEKLAPHVDGFSLMTYDYSSP---QRPGPNAPLS------WVRSCLELLLPESGKKR 219 (318)
T ss_pred EEEEEEcCccccccccccccccCHHHHHhhccEEEEEeeccCCC---CCCCCCCCcH------HHHHHHHHHHhcCCCCH
Confidence 888888765432 233589999999999999999999964 6799999998 8999999999987 999
Q ss_pred CceeecccCCCCCcCCCC---CcchHHHHHHHHhcCCCcccccccceeee-eeecC---cEEEeeCCcchhHHHHhhhhh
Q 006211 254 NKLVLGARASGPGITIDG---SMGYKFIRAFIQNYGYGAAPVYNASYVVN-LFTSG---ATWINFDGVETIKAKISYAKE 326 (656)
Q Consensus 254 ~Kl~lG~p~yG~~~~~~g---~~~y~~i~~~~~~~~~~~~~~~d~~~~~~-~~~~~---~~~i~yd~~~si~~K~~~~~~ 326 (656)
+||+||+|+||++|+..+ ..++.+..+.+... +++..||+.+..+ |.+.+ ++||+|||++|++.|++||++
T Consensus 220 ~KlvlGip~YG~~w~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~y~~~~~~~~v~ydd~~Si~~K~~~a~~ 297 (318)
T cd02876 220 AKILLGLNFYGNDYTLPGGGGAITGSEYLKLLKSN--KPKLQWDEKSAEHFFEYKNKGGKHAVFYPTLKSIQLRLDLAKE 297 (318)
T ss_pred HHeEEeccccccccccCCCCceeehHHHHHHHHhc--CCCceeccCCCcceEEEecCCCcEEEEeCCHHHHHHHHHHHHH
Confidence 999999999999998753 44455555555543 4788999885554 55543 799999999999999999999
Q ss_pred cccccceeeEeccCccc
Q 006211 327 KNLLGYKAFQLSNDDNW 343 (656)
Q Consensus 327 ~glgGv~~W~l~~Dd~~ 343 (656)
+|| |+|+|++++++..
T Consensus 298 ~~l-Gv~~W~lg~~~~~ 313 (318)
T cd02876 298 LGT-GISIWELGQGLDY 313 (318)
T ss_pred cCC-cEEEEcccCCchH
Confidence 999 9999999998754
No 10
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Some members of this family, GH18 from CAZY, belong to the chitinase class II group which includes chitinase, chitodextrinase and the killer toxin of Kluyveromyces lactis. The chitinases hydrolyse chitin oligosaccharides. The family also includes various glycoproteins from mammals; cartilage glycoprotein and the oviduct-specific glycoproteins are two examples.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1ITX_A 3ALG_A 3ALF_A 1NAR_A 3QOK_A 3G6L_A 3G6M_A 2DT1_A 2B31_A 2O92_A ....
Probab=100.00 E-value=1.8e-51 Score=432.44 Aligned_cols=297 Identities=29% Similarity=0.487 Sum_probs=250.9
Q ss_pred EEEEEecCCCC-----CCCCCCCCCCccEEEEEEEEecCCCcEEe-----cCCcchhhHHHHHHHHHhhCCCceEEEEee
Q 006211 28 IKAGYWLAGRE-----FPLSDINSALFTHLICAFAEVDSSTYQLS-----ISSANQQYFSIFANSVRRKNPSIKTLLSIW 97 (656)
Q Consensus 28 ~~~~y~~~~~~-----~~~~~i~~~~~thi~~~f~~~~~~~~~~~-----~~~~~~~~~~~~~~~~k~~~~~~kvl~sig 97 (656)
+++|||..|+. |.+++++.++||||+|+|+.+++++.... ............+..+|+++|++|||+||
T Consensus 2 ~vv~Y~~~~~~~~~~~~~~~~i~~~~~t~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvllsi- 80 (343)
T PF00704_consen 2 RVVGYYSNWNSYRPGSYKIEDIPWSKCTHIVYAFAGIDPNGNLNYPWNFDDDNDGDSSGFKNLKELKAKNPGVKVLLSI- 80 (343)
T ss_dssp EEEEEEEGGGGSSTGCSHGGGSHTTTESEEEEEEEEEETTTTEEEGTTTECSSTTHHHHHHHHHHHHHHHTT-EEEEEE-
T ss_pred EEEEEECCcCCCCCCCCCHHHCCcccCCEEEEEeeeecCCCceecccccccccCccccchhHHHHHHhhccCceEEEEe-
Confidence 57999988753 66889999999999999999999876642 23334444555667899999999999999
Q ss_pred cCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCcc----CcchHHHHHHHHHhhc
Q 006211 98 NGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNST----DLNSLGILLDEWKASA 173 (656)
Q Consensus 98 g~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~----d~~~~~~ll~~lr~~l 173 (656)
||+..+...|..++++++.|++|++++++++++|+|||||||||+|... ++.+|..||++||++|
T Consensus 81 -----------gg~~~~~~~~~~~~~~~~~r~~f~~~i~~~l~~y~~DGidiD~e~~~~~~~~~~~~~~~~~l~~L~~~l 149 (343)
T PF00704_consen 81 -----------GGWGMSSDGFSQLLSNPAKRQNFINNIVSFLKKYGFDGIDIDWEYPSSSGDPQDKDNYTAFLKELRKAL 149 (343)
T ss_dssp -----------EETTSSHHHHHHHHHSHHHHHHHHHHHHHHHHHHT-SEEEEEESSTTSTSSTTHHHHHHHHHHHHHHHH
T ss_pred -----------ccccccccccccccccHHHHHHHHHhhhhhhcccCcceeeeeeeeccccccchhhhhhhhhhhhhhhhh
Confidence 4444444349999999999999999999999999999999999999886 8999999999999999
Q ss_pred CCC----CCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCC---CCCHHHHHHHH
Q 006211 174 SDQ----PELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSS---NISTDFGIREW 246 (656)
Q Consensus 174 ~~~----~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~---~~~~~~~v~~~ 246 (656)
.+. ++++||+++|+.+..... ++++++.++|||||+|+||++++ |+..++|++||+.... ..+++.++++|
T Consensus 150 ~~~~~~~~~~~ls~a~p~~~~~~~~-~~~~~l~~~vD~v~~m~yD~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~ 227 (343)
T PF00704_consen 150 KRANRSGKGYILSVAVPPSPDYYDK-YDYKELAQYVDYVNLMTYDYHGP-WSDVTGPNAPLYDSSWDSNYYSVDSAVQYW 227 (343)
T ss_dssp HHHHHHHSTSEEEEEEECSHHHHTT-HHHHHHHTTSSEEEEETTSSSST-TSSBETTSSSSSHTTTSGTSSSHHHHHHHH
T ss_pred cccccccceeEEeeccccccccccc-cccccccccccccccccccCCCC-cccccccccccccCCccCCCceeeeehhhh
Confidence 442 379999999988765544 58999999999999999999975 5668999999997653 67899999999
Q ss_pred HHcCCCCCceeecccCCCCCcCCC----------------------CCcchHHHHHHHHhcCCCcccccccceeeeeeec
Q 006211 247 LRRGFPANKLVLGARASGPGITID----------------------GSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTS 304 (656)
Q Consensus 247 ~~~g~p~~Kl~lG~p~yG~~~~~~----------------------g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~ 304 (656)
+..|+|++||+||+|+||+.|+.. +.++|.++|......+ +...||.....+|.+.
T Consensus 228 ~~~g~p~~Kl~lglp~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~y~~~ 305 (343)
T PF00704_consen 228 IKAGVPPSKLVLGLPFYGRSWTLVNGSPNGPWGPAYWSPGKGTKNAGILSYYELCALLKSNG--YTVQWDDTAQAPYAYN 305 (343)
T ss_dssp HHTTSTGGGEEEEEESEEEEEESSSSTTSTTTBBEESEETTTTSBTTEEEHHHHHHHTHHTT--EEEEEETTTTEEEEEE
T ss_pred ccccCChhheeecCCcccccceecCCcCCCCCCcccccccccccCCCccccccchhhcccCC--cceEEeecccceEEEe
Confidence 999999999999999999987442 4689999999776444 7888998899999877
Q ss_pred C--cEEEeeCCcchhHHHHhhhhhcccccceeeEeccC
Q 006211 305 G--ATWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340 (656)
Q Consensus 305 ~--~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~D 340 (656)
+ ++|++|||++|+++|++||+++||||+++|+|++|
T Consensus 306 ~~~~~~i~~e~~~Si~~K~~~v~~~glgGv~~W~l~~D 343 (343)
T PF00704_consen 306 DDKKHWISYEDPRSIKAKMDYVKEKGLGGVAIWSLDQD 343 (343)
T ss_dssp TTTTEEEEE--HHHHHHHHHHHHHTT-SEEEEETGGGS
T ss_pred cCCCeEEEeCCHHHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 6 79999999999999999999999999999999998
No 11
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=100.00 E-value=8.5e-50 Score=414.27 Aligned_cols=279 Identities=15% Similarity=0.200 Sum_probs=228.4
Q ss_pred ceEEEEEecCCCCCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCccc
Q 006211 26 TWIKAGYWLAGREFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQ 105 (656)
Q Consensus 26 ~~~~~~y~~~~~~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~ 105 (656)
+..++||..+. ..-...|++++|||... + +.+ .+.+..+|++ ++||+++.
T Consensus 35 ~~~~~~~~~~~--~~~~~~~~~~~tti~~~-------~------~~~----~~~~~~A~~~--~v~v~~~~--------- 84 (358)
T cd02875 35 RFEFLVFSVNS--TNYPNYDWSKVTTIAIF-------G------DID----DELLCYAHSK--GVRLVLKG--------- 84 (358)
T ss_pred ceEEEEEEeCC--CcCcccccccceEEEec-------C------CCC----HHHHHHHHHc--CCEEEEEC---------
Confidence 45678998764 34578999999999874 1 111 2333334444 79999874
Q ss_pred cccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc---cCcchHHHHHHHHHhhcCCC-CCcEE
Q 006211 106 SILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS---TDLNSLGILLDEWKASASDQ-PELTL 181 (656)
Q Consensus 106 ~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~---~d~~~~~~ll~~lr~~l~~~-~~~~l 181 (656)
+. ....+++++.|++||+++++++++|||||||||||||.. +|+++|+.||++||++|++. ++++|
T Consensus 85 ----~~------~~~~l~~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p~~~~~~d~~~~t~llkelr~~l~~~~~~~~L 154 (358)
T cd02875 85 ----DV------PLEQISNPTYRTQWIQQKVELAKSQFMDGINIDIEQPITKGSPEYYALTELVKETTKAFKKENPGYQI 154 (358)
T ss_pred ----cc------CHHHcCCHHHHHHHHHHHHHHHHHhCCCeEEEcccCCCCCCcchHHHHHHHHHHHHHHHhhcCCCcEE
Confidence 11 134678999999999999999999999999999999964 67899999999999999653 47899
Q ss_pred EEEeecCCCcccc-ccChhhhhhccchhhhhhhcccCCCCC--CccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCceee
Q 006211 182 SMAVRYSPTHETV-SYPIDSMKKNLNWAHLVAYDYHMPSKE--NVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVL 258 (656)
Q Consensus 182 s~a~~~~~~~~~~-~~~~~~l~~~vD~invmtYD~~g~~~~--~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~l 258 (656)
|+++|..+..... .||+++|+++||||||||||+|++.|+ ..+|++||+. +++.+|++|++.|+|++||+|
T Consensus 155 svav~~~p~~~~~~~yd~~~l~~~vD~v~lMtYD~h~~~w~~~~~~g~~ap~~------~v~~~v~~~~~~gvp~~KLvL 228 (358)
T cd02875 155 SFDVAWSPSCIDKRCYDYTGIADASDFLVVMDYDEQSQIWGKECIAGANSPYS------QTLSGYNNFTKLGIDPKKLVM 228 (358)
T ss_pred EEEEecCcccccccccCHHHHHhhCCEeeEEeecccCCCCCCCCCCCCCCCch------hHHHHHHHHHHcCCCHHHeEE
Confidence 9999977765444 399999999999999999999987676 3588999986 899999999999999999999
Q ss_pred cccCCCCCcCC--------------------------CCCcchHHHHHHHHhcCCCcccccccceeeeee-ec---C-cE
Q 006211 259 GARASGPGITI--------------------------DGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF-TS---G-AT 307 (656)
Q Consensus 259 G~p~yG~~~~~--------------------------~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~-~~---~-~~ 307 (656)
|+|+||++|+. ++.++|.+|+...+..+ +...||+....||. +. + .+
T Consensus 229 Gip~YGr~w~~~~~~~~~~~~~~~~~p~~g~~~~~~~g~~i~Y~ei~~~~~~~~--~~~~wD~~~~~py~~y~d~~g~~~ 306 (358)
T cd02875 229 GLPWYGYDYPCLNGNLEDVVCTIPKVPFRGANCSDAAGRQIPYSEIMKQINSSI--GGRLWDSEQKSPFYNYKDKQGNLH 306 (358)
T ss_pred EeCCCCCceeCCCCcccCcccCCCCCCcCCCCCcCCCCCccCHHHHHHHHhcCC--CceeeccccccceEEEecCCCcEE
Confidence 99999999952 12468999998765543 67889999999985 32 2 27
Q ss_pred EEeeCCcchhHHHHhhhhhcccccceeeEeccCcccccchhhhhh
Q 006211 308 WINFDGVETIKAKISYAKEKNLLGYKAFQLSNDDNWALSRAAQIE 352 (656)
Q Consensus 308 ~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~Dd~~~~~~~~~~~ 352 (656)
||||||++|++.|++||+++||||+|+|++|+||..+.+.+.+..
T Consensus 307 ~V~ydD~~Si~~K~~~a~~~gL~Gv~iW~ld~dD~~g~~~~~~~~ 351 (358)
T cd02875 307 QVWYDNPQSLSIKVAYAKNLGLKGIGMWNGDLLDYSGLPIAEKQT 351 (358)
T ss_pred EEEeCCHHHHHHHHHHHHhCCCCeEEEEeccccccCCCchhhhhh
Confidence 999999999999999999999999999999999999988776443
No 12
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=100.00 E-value=4.5e-48 Score=398.74 Aligned_cols=285 Identities=20% Similarity=0.295 Sum_probs=233.6
Q ss_pred EEEEecCCCC--CCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCcccc
Q 006211 29 KAGYWLAGRE--FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQS 106 (656)
Q Consensus 29 ~~~y~~~~~~--~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~~ 106 (656)
++||+..|.. +....-..+++|||++.++.++++|. +. ... ...++..+|++ ++||+++|||++.+
T Consensus 4 ~~g~~~~~~~~~~~~~~~~~~~lt~v~p~w~~~~~~g~-~~--~~~---~~~~~~~a~~~--~~kv~~~i~~~~~~---- 71 (313)
T cd02874 4 VLGYYTPRNGSDYESLRANAPYLTYIAPFWYGVDADGT-LT--GLP---DERLIEAAKRR--GVKPLLVITNLTNG---- 71 (313)
T ss_pred EEEEEecCCCchHHHHHHhcCCCCEEEEEEEEEcCCCC-CC--CCC---CHHHHHHHHHC--CCeEEEEEecCCCC----
Confidence 5799987765 34445677899999999999998753 22 221 23444445554 79999999655421
Q ss_pred ccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCcchHHHHHHHHHhhcCCCCCcEEEEEee
Q 006211 107 ILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDLNSLGILLDEWKASASDQPELTLSMAVR 186 (656)
Q Consensus 107 ~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~~~~~~ll~~lr~~l~~~~~~~ls~a~~ 186 (656)
.++++.|+.++++++.|++||+++++++++|||||||||||+|..+|+++|+.||++||.+|+ .++++|+++++
T Consensus 72 -----~~~~~~~~~~l~~~~~r~~fi~~iv~~l~~~~~DGidiDwE~~~~~d~~~~~~fl~~lr~~l~-~~~~~lsv~~~ 145 (313)
T cd02874 72 -----NFDSELAHAVLSNPEARQRLINNILALAKKYGYDGVNIDFENVPPEDREAYTQFLRELSDRLH-PAGYTLSTAVV 145 (313)
T ss_pred -----CCCHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCcEEEecccCCHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence 145566899999999999999999999999999999999999999999999999999999995 34788998876
Q ss_pred cCCC-----ccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCceeeccc
Q 006211 187 YSPT-----HETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVLGAR 261 (656)
Q Consensus 187 ~~~~-----~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~lG~p 261 (656)
+... .+...||+++++++||+||||+||+||+ | +.+||+||+. +++..++++. +|+|++||+||+|
T Consensus 146 p~~~~~~~~~~~~~~~~~~l~~~vD~v~lm~YD~~~~-~-~~~gp~a~~~------~~~~~~~~~~-~gvp~~KlvlGip 216 (313)
T cd02874 146 PKTSADQFGNWSGAYDYAAIGKIVDFVVLMTYDWHWR-G-GPPGPVAPIG------WVERVLQYAV-TQIPREKILLGIP 216 (313)
T ss_pred CccccccccccccccCHHHHHhhCCEEEEEEeccCCC-C-CCCCccCChH------HHHHHHHHHH-hcCCHHHEEEeec
Confidence 5532 2235689999999999999999999975 3 5689999986 6777777665 8999999999999
Q ss_pred CCCCCcCCC-------CCcchHHHHHHHHhcCCCcccccccceeeeee-ec----CcEEEeeCCcchhHHHHhhhhhccc
Q 006211 262 ASGPGITID-------GSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF-TS----GATWINFDGVETIKAKISYAKEKNL 329 (656)
Q Consensus 262 ~yG~~~~~~-------g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~-~~----~~~~i~yd~~~si~~K~~~~~~~gl 329 (656)
+||++|+.. +.++|.+++..+.+. ++...||+.+..||. +. ..+||+|||++|++.|++|++++||
T Consensus 217 ~YG~~w~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~y~~~~g~~~~v~y~d~~Si~~K~~~~~~~~l 294 (313)
T cd02874 217 LYGYDWTLPYKKGGKASTISPQQAINLAKRY--GAEIQYDEEAQSPFFRYVDEQGRRHEVWFEDARSLQAKFELAKEYGL 294 (313)
T ss_pred ccccccccCCCCCcCccccCHHHHHHHHHHc--CCCeEECcccCCCcEEEEeCCCCEEEEEeCcHHHHHHHHHHHHHcCC
Confidence 999999654 457888888877764 488899999888874 22 3589999999999999999999999
Q ss_pred ccceeeEeccCcc
Q 006211 330 LGYKAFQLSNDDN 342 (656)
Q Consensus 330 gGv~~W~l~~Dd~ 342 (656)
||+++|++++||.
T Consensus 295 gGv~iW~lg~dD~ 307 (313)
T cd02874 295 RGVSYWRLGLEDP 307 (313)
T ss_pred CeEEEEECCCCCc
Confidence 9999999999994
No 13
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=100.00 E-value=5.3e-47 Score=377.67 Aligned_cols=240 Identities=23% Similarity=0.351 Sum_probs=201.8
Q ss_pred EEEEecCCCCCC--CCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCcccc
Q 006211 29 KAGYWLAGREFP--LSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQS 106 (656)
Q Consensus 29 ~~~y~~~~~~~~--~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~~ 106 (656)
++|||++|..+. ++++|.++||||+|+|+.++++| .+...+. ...+...++.+|+ +++||++|||
T Consensus 1 vigyy~~w~~~~~~~~~~~~~~lThv~~~f~~i~~~G-~l~~~~~-~~~~~~~~~~~~~--~~~kvl~sig--------- 67 (253)
T cd06545 1 VVGYLPNYDDLNALSPTIDFSKLTHINLAFANPDANG-TLNANPV-RSELNSVVNAAHA--HNVKILISLA--------- 67 (253)
T ss_pred CEEEeCCcccccCCcccCChhhCCeEEEEEEEECCCC-eEEecCc-HHHHHHHHHHHHh--CCCEEEEEEc---------
Confidence 479999998754 89999999999999999999875 4444322 2234444455554 4799999994
Q ss_pred ccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCcchHHHHHHHHHhhcCCCCCcEEEEEee
Q 006211 107 ILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDLNSLGILLDEWKASASDQPELTLSMAVR 186 (656)
Q Consensus 107 ~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~~~~~~ll~~lr~~l~~~~~~~ls~a~~ 186 (656)
|+..+. |+.++++++.|++|++++++++++|+|||||||||+|... +++|..|+++||+++++ .+++||++++
T Consensus 68 ---g~~~~~--~~~~~~~~~~r~~fi~~lv~~~~~~~~DGIdiDwE~~~~~-~~~~~~fv~~Lr~~l~~-~~~~lt~av~ 140 (253)
T cd06545 68 ---GGSPPE--FTAALNDPAKRKALVDKIINYVVSYNLDGIDVDLEGPDVT-FGDYLVFIRALYAALKK-EGKLLTAAVS 140 (253)
T ss_pred ---CCCCCc--chhhhcCHHHHHHHHHHHHHHHHHhCCCceeEEeeccCcc-HhHHHHHHHHHHHHHhh-cCcEEEEEcc
Confidence 443322 5779999999999999999999999999999999999865 78999999999999943 4789999997
Q ss_pred cCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCC-CCCceeecccCCCC
Q 006211 187 YSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGF-PANKLVLGARASGP 265 (656)
Q Consensus 187 ~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~-p~~Kl~lG~p~yG~ 265 (656)
+..... + .+++.++||||||||||++|+|+.+.+|++||+. +++.++++|++.|+ |++||+||+|+||+
T Consensus 141 ~~~~~~---~-~~~~~~~vD~i~vMtYD~~g~~~~~~~g~~a~~~------~~~~~v~~~~~~g~ip~~KlvlGlp~YG~ 210 (253)
T cd06545 141 SWNGGA---V-SDSTLAYFDFINIMSYDATGPWWGDNPGQHSSYD------DAVNDLNYWNERGLASKDKLVLGLPFYGY 210 (253)
T ss_pred Cccccc---c-cHHHHhhCCEEEEEcCcCCCCCCCCCCCCCCchH------hHHHHHHHHHHcCCCCHHHEEEEeCCccc
Confidence 653322 3 3678899999999999999887666789999986 78999999999998 99999999999998
Q ss_pred CcCCCCCcchHHHHHHHHhcCCCcccccccceeeeeeecCcEEEeeCCcchhHHHHhhhhhcccccceeeEeccCc
Q 006211 266 GITIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSNDD 341 (656)
Q Consensus 266 ~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~Dd 341 (656)
+| +|+++.+++.|+++|+++ +||+|+|++++|.
T Consensus 211 ~w------------------------------------------~~~~~~~~~~~~~~~~~~-~gG~~~w~~~~d~ 243 (253)
T cd06545 211 GF------------------------------------------YYNGIPTIRNKVAFAKQN-YGGVMIWELSQDA 243 (253)
T ss_pred cc------------------------------------------cCCCHHHHHHHHHHHHHh-cCeEEEEeccCCC
Confidence 76 588888999999999999 9999999999997
No 14
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
Probab=100.00 E-value=3.1e-44 Score=365.30 Aligned_cols=284 Identities=14% Similarity=0.166 Sum_probs=218.8
Q ss_pred EEEEecCCCC--CCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCcccc
Q 006211 29 KAGYWLAGRE--FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQS 106 (656)
Q Consensus 29 ~~~y~~~~~~--~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~~ 106 (656)
+.|||..|.. +.--......+|||+..+..++..++.+.. ..+.......+.+|+++|.++++.++
T Consensus 2 ~l~~~~~w~~~s~~sl~~~~~~l~~vsP~W~~~~~~~g~l~~--~~d~~~~~~~~~~k~~~~~l~~~~~~---------- 69 (298)
T cd06549 2 ALAFYTPWDDASFASLKRHAPRLDWLVPEWLNLTGPEGRIDV--FVDPQGVAIIAAAKAHPKVLPLVQNI---------- 69 (298)
T ss_pred eeEEEecCChhhHHHHHHhhccCCEEeceeEEEecCCCceec--cCChHHHHHHHHHHcCCceeEEEEec----------
Confidence 4688877654 333344566899999999999854455542 22222233446678888888888888
Q ss_pred ccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCcchHHHHHHHHHhhcCCCCCcEEEEEee
Q 006211 107 ILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDLNSLGILLDEWKASASDQPELTLSMAVR 186 (656)
Q Consensus 107 ~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~~~~~~ll~~lr~~l~~~~~~~ls~a~~ 186 (656)
+|+..++..|+.++++++.|++||+++++++++|||||||||||++..+|+++|+.||++||++|++ .++.|++++|
T Consensus 70 --~~~~~~~~~~~~~l~~~~~R~~fi~~iv~~~~~~~~dGidiD~E~~~~~d~~~~~~fl~eL~~~l~~-~~~~lsv~v~ 146 (298)
T cd06549 70 --SGGAWDGKNIARLLADPSARAKFIANIAAYLERNQADGIVLDFEELPADDLPKYVAFLSELRRRLPA-QGKQLTVTVP 146 (298)
T ss_pred --CCCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCCEEEecCCCChhHHHHHHHHHHHHHHHhhh-cCcEEEEEec
Confidence 5555555569999999999999999999999999999999999999999999999999999999954 4789999998
Q ss_pred cCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCceeecccCCCCC
Q 006211 187 YSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVLGARASGPG 266 (656)
Q Consensus 187 ~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG~~ 266 (656)
+.+. .||+++++++||+++|||||+|+++ +.+||.+|.. +++..+++. ..|+|++||+||+|+||++
T Consensus 147 ~~~~----~~d~~~l~~~~D~v~lMtYD~~~~~--~~~gp~a~~~------~~~~~~~~~-~~~vp~~KlvlGip~YG~~ 213 (298)
T cd06549 147 ADEA----DWNLKALARNADKLILMAYDEHYQG--GAPGPIASQD------WFESNLAQA-VKKLPPEKLIVALGSYGYD 213 (298)
T ss_pred CCCC----CCCHHHHHHhCCEEEEEEeccCCCC--CCCCCCCChh------hHHHHHHHH-HhCCCHHHEEEEecccCcc
Confidence 7643 4899999999999999999999642 2455666543 566666664 4799999999999999999
Q ss_pred cCCCC---CcchHHHHHHHHhcCCCcccccccceeee-eee-c--C-cEEEeeCCcchhHHHHhhhhhcccccceeeEec
Q 006211 267 ITIDG---SMGYKFIRAFIQNYGYGAAPVYNASYVVN-LFT-S--G-ATWINFDGVETIKAKISYAKEKNLLGYKAFQLS 338 (656)
Q Consensus 267 ~~~~g---~~~y~~i~~~~~~~~~~~~~~~d~~~~~~-~~~-~--~-~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~ 338 (656)
|+..+ ..+..+....+...+ ....|++....| |.+ + | .++|||||++|++.|+++|+++||+|+++|+++
T Consensus 214 w~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~h~Vw~~d~~Sl~~K~~~a~~~~l~Gva~W~lg 291 (298)
T cd06549 214 WTKGGNTKAISSEAAWLLAAHAS--AAVKFDDKASNATYFFYDDEGVSHEVWMLDAVTLFNQLKAVQRLGPAGVALWRLG 291 (298)
T ss_pred ccCCCCCcccCHHHHHHHHHHcC--CcceecccccCCceEEEcCCCcEEEEEeccHHHHHHHHHHHHHcCCCcEEEEecc
Confidence 98753 344444444344333 566676544444 333 1 2 479999999999999999999999999999999
Q ss_pred cCcc
Q 006211 339 NDDN 342 (656)
Q Consensus 339 ~Dd~ 342 (656)
+||.
T Consensus 292 ~ed~ 295 (298)
T cd06549 292 SEDP 295 (298)
T ss_pred CCCC
Confidence 9984
No 15
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-43 Score=365.62 Aligned_cols=231 Identities=47% Similarity=0.813 Sum_probs=203.0
Q ss_pred CccccCHHHHHHHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEE
Q 006211 421 NLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500 (656)
Q Consensus 421 ~~~~~~~~~~~~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 500 (656)
....|++.++..++++|...+.||+|+||.||+|.+.++..||||++.....+...+|.+|+.++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 57789999999999999999999999999999999999999999988776443135599999999999999999999999
Q ss_pred eeCC-ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEE
Q 006211 501 TERD-ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKIS 579 (656)
Q Consensus 501 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~ 579 (656)
.+.+ ..+||+|||++|+|.++|+..... .++|.++++|+.++|+||+|||+...++||||||||+|||+|+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 9988 499999999999999999875444 78999999999999999999999888889999999999999999999999
Q ss_pred eccCccccccCccccccccc-cccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccccccccc
Q 006211 580 DFGMAKLFRKDVDEANTGRI-VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYA 654 (656)
Q Consensus 580 DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~ 654 (656)
|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||+++||+||++|.+.....+...+++|+
T Consensus 220 DFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 220 DFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred CccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 99999654321 1111122 7899999999999999999999999999999999999998876555555577764
No 16
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=350.07 Aligned_cols=205 Identities=28% Similarity=0.461 Sum_probs=181.7
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
..+|...+.||+|+||+||+|+. .++..||||.+... ..+..+.+..|+.+|+.++|||||++++++..++..++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 35688888999999999999965 45789999999776 4566677899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC------CcEEEEeccCc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE------LNPKISDFGMA 584 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~------~~~kl~DfGla 584 (656)
|||.+|+|..|++. +..+++..++.++.|++.||++||+++ ||||||||+||||+.. -.+||+|||+|
T Consensus 89 EyC~gGDLs~yi~~---~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR---RGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999999964 336899999999999999999999998 9999999999999875 45899999999
Q ss_pred cccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCccc
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~ 647 (656)
+.+.. .......+|++.|||||++...+|+.|+|+||+|+++|++++|+.||+..+..+-
T Consensus 163 R~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL 222 (429)
T KOG0595|consen 163 RFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL 222 (429)
T ss_pred hhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence 98763 3334567999999999999999999999999999999999999999985544443
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-41 Score=328.37 Aligned_cols=203 Identities=26% Similarity=0.392 Sum_probs=180.5
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
.++|++++.||+|+||+|+.++. .+++.+|+|++++.. ..+.+....|..+|.+++||.||++...|++...+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 35789999999999999999954 568899999998753 23456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
+||+.||.|...|. +...+++..+..++.+|+.||.|||+.+ ||||||||+|||+|++|+++|+|||+|+....
T Consensus 104 ld~~~GGeLf~hL~---~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ---REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHH---hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999998884 3456889999999999999999999998 99999999999999999999999999985433
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
....+...+||+.|||||++.+..|+..+|.||||+++|||++|.+||...+.
T Consensus 178 --~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 178 --DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV 230 (357)
T ss_pred --CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH
Confidence 22344557999999999999999999999999999999999999999976653
No 18
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-41 Score=345.65 Aligned_cols=206 Identities=26% Similarity=0.457 Sum_probs=185.9
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
..|...+.||+|+|+.||++.. .+|+.||+|++.+. .....+.+.+|+++.+.|+|||||+++++|++.++.|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999966 88999999999764 3445677899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
|+|..++|..++. ++..+++.+++.++.||+.||.|||+.+ |+|||||..|+|++++.++||+|||||..+..+
T Consensus 98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999998885 4567999999999999999999999998 999999999999999999999999999987654
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccc
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~ 648 (656)
.+ +..+.||||.|+|||++.....+..+||||+|||+|.||.|++||+..+-.+..
T Consensus 172 ~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety 227 (592)
T KOG0575|consen 172 GE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY 227 (592)
T ss_pred cc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH
Confidence 33 344589999999999999999999999999999999999999999876554443
No 19
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-41 Score=317.92 Aligned_cols=205 Identities=23% Similarity=0.371 Sum_probs=177.1
Q ss_pred CCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEE-EeeCCc-eEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGY-CTERDE-NMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~~-~~lv~ 510 (656)
+|++.++||+|+||+||++ +..+|..+|.|.++-. ..+..+.+..|+.+|++|+|||||+++++ +.++.. ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 4667899999999999999 6678999999988743 45566789999999999999999999983 444444 88999
Q ss_pred EecCCCChhhhhhC-CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 511 EYLPNKSLDLYLFD-PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNF-RVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 511 e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~-~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
|+|..|+|...+.. ..++..+++...++++.|++.||..+|+.-+. -|+||||||.||+|+.+|.+||+|||+++.+.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~ 179 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS 179 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence 99999999988854 23455689999999999999999999983321 38999999999999999999999999999886
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
... ......+|||.||+||.+....|+.||||||+||++|||...+.||.+.
T Consensus 180 s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~ 231 (375)
T KOG0591|consen 180 SKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD 231 (375)
T ss_pred chh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 543 3445679999999999999999999999999999999999999999765
No 20
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=317.21 Aligned_cols=197 Identities=28% Similarity=0.394 Sum_probs=174.7
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc-eEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE-NMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~e~~ 513 (656)
.+.++.||+|+.|+||++.+ .+++.+|+|++... .+...+++.+|+++++..+||+||.++|.|..... ..|+||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 44568999999999999955 56889999999654 34456789999999999999999999999999884 99999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++|+|+.++... ..+++...-.++.++++||.|||+.+ +||||||||+|||++..|++||||||.++.+...
T Consensus 161 DgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred CCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 999999998543 45899999999999999999999633 3999999999999999999999999999876543
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....+||..|||||.+.+..|+.++||||||++++|+.+|+.|+...
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 345578999999999999999999999999999999999999999764
No 21
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=328.68 Aligned_cols=201 Identities=33% Similarity=0.568 Sum_probs=174.5
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-ceEEEEEecCC
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-ENMLIYEYLPN 515 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~~ 515 (656)
..+.||+|+||+||+|.+.....||||++..... ...+.|.+|+.+|.+++|||||+++|+|.+.. ..++||||+++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 4466999999999999995555599999986532 22568999999999999999999999999887 79999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEeccCccccccCcccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfGla~~~~~~~~~~ 594 (656)
|+|..+++.. ++..+++..+++++.+|++||.|||+++. ||||||||+|||++.++ ++||+|||+++...... .
T Consensus 125 GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~ 199 (362)
T KOG0192|consen 125 GSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--T 199 (362)
T ss_pred CcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--c
Confidence 9999999764 45679999999999999999999999874 99999999999999997 99999999998654321 2
Q ss_pred cccccccccccccccccc--CCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVK--KGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~--~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
......||+.|||||++. ...|+.|+||||||+++|||+||+.||.....
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~ 251 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP 251 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH
Confidence 222358999999999999 66999999999999999999999999976553
No 22
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=300.47 Aligned_cols=199 Identities=27% Similarity=0.393 Sum_probs=179.1
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|+.++.||.|+||.|.+++.+ +|..+|+|+++... .+..+...+|..+|+.+.||+++++.+.|.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45778899999999999999654 58899999998753 345567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||++||.|..+++.. ..+++..++.++.||+.|++|||+++ |++|||||+|||+|.+|.+||+|||.|+....
T Consensus 124 eyv~GGElFS~Lrk~---~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS---GRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred eccCCccHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 999999999999543 35899999999999999999999998 99999999999999999999999999987542
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
.+-+.||||.|+|||++....++.++|.|||||++|||+.|.+||...+.
T Consensus 197 ----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 197 ----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 35568999999999999999999999999999999999999999976554
No 23
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-39 Score=318.22 Aligned_cols=204 Identities=25% Similarity=0.393 Sum_probs=174.4
Q ss_pred HhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChh-------hHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 006211 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ-------GLEEFKNEVSLTARLQHVNLLRVLGYCTERD 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 504 (656)
..+.|.+.+.||+|+||.|-+| ...+|+.||||++++.... ....+++|+++|++++|||||++.+++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4566788999999999999999 5567999999999764211 2234679999999999999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC---CcEEEEec
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE---LNPKISDF 581 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~---~~~kl~Df 581 (656)
..||||||++||+|.+.+.. ...+.+.....+++|++.|+.|||++| |+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence 99999999999999988843 445778888999999999999999998 9999999999999876 77999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCC---CccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIY---SMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
|+|+... ......+.|||+.|.|||++.+... ..++|+||+||+||-+|||.+||....++
T Consensus 324 GlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~ 387 (475)
T KOG0615|consen 324 GLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD 387 (475)
T ss_pred chhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC
Confidence 9998764 2344556899999999999976553 34789999999999999999999765443
No 24
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=329.04 Aligned_cols=207 Identities=32% Similarity=0.516 Sum_probs=178.0
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
..+.||+|.||+||.|.+.....||+|.++... ...+.|.+|+++|++|+|+|||+++++|..+..++||||||+.|+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 458899999999999999888899999997752 3346788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
.++|.. ..+..+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||+|+....+... ....
T Consensus 289 l~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~-~~~~ 363 (468)
T KOG0197|consen 289 LDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT-ASEG 363 (468)
T ss_pred HHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCcee-ecCC
Confidence 999976 24456888999999999999999999998 999999999999999999999999999955443222 2223
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCCccccccc
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGTSENLNFL 651 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 651 (656)
..-+..|.|||.+....++.|||||||||+||||+| |+.|+......+...++
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l 417 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL 417 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH
Confidence 345679999999999999999999999999999998 55566766665555444
No 25
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.8e-38 Score=339.59 Aligned_cols=212 Identities=30% Similarity=0.485 Sum_probs=181.3
Q ss_pred cCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
.+.+..+.||+|+||+||+|.. +....||||.++...+. ...+|++|++++..++|||||+|+|.|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 4455678999999999999954 23457999999887655 6789999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCc-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcE
Q 006211 508 LIYEYLPNKSLDLYLFDPIR-----------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~ 576 (656)
+|+|||..|+|.+||..... +.+++..+.+.|+.|||.||.||-+.+ +|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEE
Confidence 99999999999999953211 334889999999999999999999988 9999999999999999999
Q ss_pred EEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCCccccc
Q 006211 577 KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGTSENLN 649 (656)
Q Consensus 577 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~ 649 (656)
||+|||+++..-..+.....+...-+.+|||||.|..+.||.+||||||||+|||++| |+.|+....+++..+
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 9999999997655444333334456789999999999999999999999999999997 777887666655443
No 26
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=100.00 E-value=3.2e-37 Score=300.49 Aligned_cols=204 Identities=27% Similarity=0.429 Sum_probs=174.7
Q ss_pred EEEEecCCCCCC---CCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCccc
Q 006211 29 KAGYWLAGREFP---LSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQ 105 (656)
Q Consensus 29 ~~~y~~~~~~~~---~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~ 105 (656)
++|||..|.... +..++.++||||+|+|+.+++++......+.........+..+|+++|++||++||
T Consensus 1 vv~y~~~w~~~~~~~~~~~~~~~~thvi~~f~~v~~~~~~~~~~~~~~~~~~~~i~~l~~~~~g~kv~~si--------- 71 (210)
T cd00598 1 VICYYDGWSSGRGPDPTDIPLSLCTHIIYAFAEISSDGSLNLFGDKSEEPLKGALEELASKKPGLKVLISI--------- 71 (210)
T ss_pred CEEEEccccccCCCChhhCCcccCCEEEEeeEEECCCCCEecccCcccHHHHHHHHHHHHhCCCCEEEEEE---------
Confidence 379998876543 58999999999999999999887655423333444556667888888999999999
Q ss_pred cccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccC---cchHHHHHHHHHhhcCCCCCcEEE
Q 006211 106 SILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTD---LNSLGILLDEWKASASDQPELTLS 182 (656)
Q Consensus 106 ~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d---~~~~~~ll~~lr~~l~~~~~~~ls 182 (656)
||+..+.. | .++++++.|++|++++++++++|+|||||||||+|...+ +++|+.|+++||+++++ .+++||
T Consensus 72 ---gg~~~~~~-~-~~~~~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~~~~~~~~~~~~~ll~~lr~~l~~-~~~~ls 145 (210)
T cd00598 72 ---GGWTDSSP-F-TLASDPASRAAFANSLVSFLKTYGFDGVDIDWEYPGAADNSDRENFITLLRELRSALGA-ANYLLT 145 (210)
T ss_pred ---cCCCCCCC-c-hhhcCHHHHHHHHHHHHHHHHHcCCCceEEeeeCCCCcCccHHHHHHHHHHHHHHHhcc-cCcEEE
Confidence 44443433 4 889999999999999999999999999999999998875 89999999999999943 379999
Q ss_pred EEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCceeecccC
Q 006211 183 MAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVLGARA 262 (656)
Q Consensus 183 ~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~lG~p~ 262 (656)
+++|+.+.....+|+++++.+++||+|+|+|| |+||+|+
T Consensus 146 ~a~~~~~~~~~~~~~~~~l~~~vD~v~vm~Yd-----------------------------------------l~~g~~~ 184 (210)
T cd00598 146 IAVPASYFDLGYAYDVPAIGDYVDFVNVMTYD-----------------------------------------LVLGVPF 184 (210)
T ss_pred EEecCChHHhhccCCHHHHHhhCCEEEEeeec-----------------------------------------ccccchh
Confidence 99998776554458999999999999999998 8999999
Q ss_pred CCCCcCCCCCcchHHHHHHHHhcCCCcccccccceeeeeeecCcEEEeeCCcchhHHHHhhhhhcccccceeeEeccC
Q 006211 263 SGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEKNLLGYKAFQLSND 340 (656)
Q Consensus 263 yG~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~yd~~~si~~K~~~~~~~glgGv~~W~l~~D 340 (656)
| |++.|++|++++++||+|+|++++|
T Consensus 185 ~----------------------------------------------------s~~~k~~~~~~~~~gGv~~w~~~~d 210 (210)
T cd00598 185 Y----------------------------------------------------SLGAKAKYAKQKGLGGVMIWELDQD 210 (210)
T ss_pred h----------------------------------------------------hHHHHHHHHHHcCCceEEEEeccCC
Confidence 8 9999999999999999999999987
No 27
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-38 Score=315.28 Aligned_cols=208 Identities=28% Similarity=0.443 Sum_probs=176.4
Q ss_pred hcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENML 508 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 508 (656)
.+.|+.+++||+|.||.||+| +..+|+.||+|+++... +....-..+||.+|++|+||||++|.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 456788899999999999999 56789999999987654 44455678999999999999999999998876 68999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
|+|||+. +|.-++..+ .-.+++.++..++.|++.||+|+|+++ |+|||||.+|||||++|.+||+|||||+.+.
T Consensus 196 VFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999976 565555432 335899999999999999999999998 9999999999999999999999999999876
Q ss_pred cCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccc
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~ 648 (656)
...... ....+-|..|.|||++.+ ..|+.++|+||.||||.||+.|++.+.+.+.-+++
T Consensus 270 ~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl 329 (560)
T KOG0600|consen 270 PSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL 329 (560)
T ss_pred CCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHH
Confidence 654333 334567999999998876 56999999999999999999999999876654443
No 28
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=314.94 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=178.8
Q ss_pred HHHhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCc
Q 006211 431 KAATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDE 505 (656)
Q Consensus 431 ~~~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 505 (656)
+...++|...+.||+|+|++|++|+ ...++.||||++.+. .+...+-+..|-+.|.+| .||.|++|+..|+++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 3445789999999999999999994 457899999999765 222334466788889999 89999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
+|+|+||+++|+|..++... +.+++...+.++.+|+.+|+|||+++ ||||||||+|||+|.+++++|+|||.|+
T Consensus 149 LYFvLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccc
Confidence 99999999999999999643 45899999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCccc---------c--ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 586 LFRKDVDE---------A--NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 586 ~~~~~~~~---------~--~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.+...... . .....+||..|.+||++.....++.+|+|+|||++|+|+.|++||...
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 77543211 1 114579999999999999999999999999999999999999999754
No 29
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.9e-37 Score=312.45 Aligned_cols=208 Identities=24% Similarity=0.360 Sum_probs=180.3
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
..++|+++++||+|+||+||.|+. .+|..+|+|+++++. ..+.+.++.|-.+|....+|.||+|+..|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 457899999999999999999954 569999999998763 3456678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
||||++||++..+|. +...|++..+..++.+++.|+..||+.| +|||||||+|+|||..|++||+|||||.-+.
T Consensus 219 iMEylPGGD~mTLL~---~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM---RKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHH---hcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999984 4567999999999999999999999998 9999999999999999999999999995322
Q ss_pred cC---------------------cccc-----c-------------------cccccccccccccccccCCCCCccchhH
Q 006211 589 KD---------------------VDEA-----N-------------------TGRIVGTYGYVPPEYVKKGIYSMKYDVY 623 (656)
Q Consensus 589 ~~---------------------~~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~s~~sDvw 623 (656)
.. .+.. . .-..+|||.|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 10 0000 0 0124899999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCcc
Q 006211 624 SFGVLLLQIISSKRNARYYGTSE 646 (656)
Q Consensus 624 slGvil~elltg~~p~~~~~~~~ 646 (656)
|||||+||||.|.+||...+..+
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~ 395 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQE 395 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999999999999997766544
No 30
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=7.3e-38 Score=296.73 Aligned_cols=208 Identities=21% Similarity=0.318 Sum_probs=176.7
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hh-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QG-LEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
+.|+.+.++|+|+||.|++|+. .+|+.||||++..+.+ +. .+-.++|+++|++++|+|+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 4678889999999999999965 4699999999876533 23 3346899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
||+..-|+++-.. ...++.+...+++.|+++|+.|+|+++ +|||||||+||||+.++.+||||||+|+.+...
T Consensus 82 ~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p- 154 (396)
T KOG0593|consen 82 YCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP- 154 (396)
T ss_pred ecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC-
Confidence 9988777665433 234788999999999999999999998 999999999999999999999999999987642
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccccc
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNF 650 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~~~ 650 (656)
.......+.|..|.|||.+.+ .+|...+||||+||++.||++|.+-|.+..+-+++.+
T Consensus 155 -gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~ 213 (396)
T KOG0593|consen 155 -GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYL 213 (396)
T ss_pred -cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHH
Confidence 223344588999999998876 7899999999999999999999999987665554443
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-37 Score=316.82 Aligned_cols=197 Identities=27% Similarity=0.417 Sum_probs=176.6
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|.+.+.||+|+||.||+|+. .+.+.||+|.+.+.. +++.+.+.+|+++++.++||||+.++++|+.....++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4688889999999999999954 457899999987653 4456779999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+.| +|..++.+ ...++++.+..++.+++.||.|||++. |+|||+||+|||++.++.+|+||||+|+.+...
T Consensus 82 ~a~g-~L~~il~~---d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ---DGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN- 153 (808)
T ss_pred hhhh-hHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC-
Confidence 9977 99988853 456999999999999999999999987 999999999999999999999999999976542
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
......+.||+.|||||...+.+|+..+|+|||||++||+++|++||-
T Consensus 154 -t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~ 201 (808)
T KOG0597|consen 154 -TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFY 201 (808)
T ss_pred -ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCch
Confidence 233456789999999999999999999999999999999999999994
No 32
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=308.95 Aligned_cols=207 Identities=28% Similarity=0.448 Sum_probs=180.3
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhh-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
.+...+.++||+|.||+|.++....+..||||.++...... ..+|.+|+++|.+++||||++++|+|..++.+++|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 34556789999999999999998888999999999875544 47899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
|++|+|..++....... +.-....+|+.||+.||+||.+.+ +|||||.++|||++.++++||+|||+++.+-....
T Consensus 617 mEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence 99999999997653332 455667889999999999999998 99999999999999999999999999997665555
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHH--cCCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII--SSKRNARYYGT 644 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ell--tg~~p~~~~~~ 644 (656)
....+..+-+.+|||||.+..+.++.+||+|+||+++||++ +..+|+....+
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 55555667789999999999999999999999999999975 56777765544
No 33
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.4e-36 Score=280.19 Aligned_cols=202 Identities=24% Similarity=0.438 Sum_probs=173.2
Q ss_pred cCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChh-h-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQ-G-LEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.+|...++||+|.||.||+| +.++|+.||||+++..... . .....+|++.|+.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 36778899999999999999 5578999999999865332 1 2356899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
||+ .+|+..+.+ +...++..+...++.++++|++|||++. |+||||||.|+|++++|.+||+|||+++.+.+..
T Consensus 82 fm~-tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 996 578888865 3456899999999999999999999998 9999999999999999999999999999887543
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
... ...+-|..|.|||.+.+ ..|+..+||||.||++.||+-|.+-|.+.++
T Consensus 156 ~~~--~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD 207 (318)
T KOG0659|consen 156 RIQ--THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD 207 (318)
T ss_pred ccc--ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch
Confidence 332 23377899999998765 5699999999999999999998877665443
No 34
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=310.38 Aligned_cols=200 Identities=27% Similarity=0.448 Sum_probs=180.5
Q ss_pred cCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
..|...++||+|+-|.||.+ +..+++.||||++........+-+.+|+.+|+..+|+|||++++.+...+.+|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 46777889999999999999 55678899999998876666677899999999999999999999999899999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++|+|.+.+ ....+++.++..|++++++||+|||.++ |+|||||..|||++.+|.+||+|||+|..+....
T Consensus 353 ~ggsLTDvV----t~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~-- 423 (550)
T KOG0578|consen 353 EGGSLTDVV----TKTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ-- 423 (550)
T ss_pred CCCchhhhh----hcccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc--
Confidence 999998877 3445899999999999999999999998 9999999999999999999999999998776543
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......+||+.|||||++....|++|+||||||++++||+-|.+||-+.+
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~ 473 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNEN 473 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCC
Confidence 34556899999999999999999999999999999999999999997533
No 35
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=295.46 Aligned_cols=195 Identities=32% Similarity=0.514 Sum_probs=165.4
Q ss_pred CCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHh--cCCCceeeEEEEEeeCC----ceEEEEE
Q 006211 438 SSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTAR--LQHVNLLRVLGYCTERD----ENMLIYE 511 (656)
Q Consensus 438 ~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~lv~e 511 (656)
+..+.||+|.||.||+|.+ +++.||||++... ..+.++.|-+|.+. ++|+||+++++.-.... .++||++
T Consensus 213 ~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~ 288 (534)
T KOG3653|consen 213 QLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTE 288 (534)
T ss_pred hhHHHhhcCccceeehhhc-cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEee
Confidence 4567899999999999988 5599999999654 34567777777765 48999999998876555 7899999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh------cCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE------YSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~------~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
|.+.|+|.+|| ..+.++|....+++..+++||+|||+ .+.++|+|||||++||||.+|+.+.|+|||+|.
T Consensus 289 fh~kGsL~dyL----~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 289 FHPKGSLCDYL----KANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred eccCCcHHHHH----HhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 99999999999 45679999999999999999999996 334579999999999999999999999999999
Q ss_pred ccccCccccccccccccccccccccccCCC-CC-----ccchhHHHHHHHHHHHcCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGI-YS-----MKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-----~~sDvwslGvil~elltg~~p~~ 640 (656)
.+............+||.+|||||++.+.. +. .+.||||+|.+||||++.-.-+.
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~ 425 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDAD 425 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 887665555555689999999999997643 22 36899999999999999876553
No 36
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-36 Score=297.67 Aligned_cols=202 Identities=28% Similarity=0.456 Sum_probs=170.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC--ceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD--ENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 511 (656)
.++...+.||+|+||.||++... +|...|||..........+.+.+|+.+|.+++|||||+.+|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34667789999999999999554 48999999987764444677899999999999999999999754444 5899999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEEEeccCcccccc-
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKISDFGMAKLFRK- 589 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl~DfGla~~~~~- 589 (656)
|+++|+|.+++..... .+++..++.++.||++||.|||+++ |+||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999865432 5899999999999999999999887 999999999999999 79999999999987653
Q ss_pred CccccccccccccccccccccccCCC-CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
...........||+.|||||++..+. ...++|||||||++.||+||++||..
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 11122234568999999999998533 34599999999999999999999976
No 37
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=304.30 Aligned_cols=201 Identities=26% Similarity=0.394 Sum_probs=172.5
Q ss_pred HhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChhhHHH--HHHHHHHHHhcC-CCceeeEEEEEeeCC-ceE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEE--FKNEVSLTARLQ-HVNLLRVLGYCTERD-ENM 507 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 507 (656)
..++|..+++||.|.||.||+|+ ...+..||||+++..-.. .++ =++|+..|++++ ||||+++.+++.+.+ .++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 45678899999999999999994 556899999999765322 222 268999999998 999999999998887 899
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
+|||||+ .+|..++.++ +..+++..++.|+.||++||+|+|..| +.|||+||+|||+..+..+||+|||+|+.+
T Consensus 87 fVfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence 9999995 5788887665 567999999999999999999999998 999999999999998889999999999987
Q ss_pred ccCcccccccccccccccccccccc-CCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 588 RKDVDEANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 588 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.+.. .....+.|..|.|||++. ...|+.+.||||+|||++|+.+.++-|.+..
T Consensus 161 ~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 161 RSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred ccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 6543 334458899999999764 5678999999999999999999999887543
No 38
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=309.30 Aligned_cols=207 Identities=25% Similarity=0.367 Sum_probs=180.2
Q ss_pred HHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCce
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 506 (656)
..-++|...++||+|+||+|+++.. .+++.+|||++++. .....+....|-.++... +||.+++++.+|++.+.+
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3456889999999999999999965 45789999999876 344566778888888777 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++||||+.||++..+. +...+++..+..++..++.||.|||+++ ||+||||.+|||+|.+|.+||+|||+++.
T Consensus 445 ~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence 9999999999954333 3456899999999999999999999998 99999999999999999999999999985
Q ss_pred cccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCccc
Q 006211 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~ 647 (656)
.-. ....+++.+||+.|||||++.+..|+..+|.|||||+|||||.|..||.+.+.++.
T Consensus 518 ~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~ 576 (694)
T KOG0694|consen 518 GMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV 576 (694)
T ss_pred cCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 332 23467789999999999999999999999999999999999999999987665543
No 39
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-35 Score=304.43 Aligned_cols=203 Identities=26% Similarity=0.418 Sum_probs=176.6
Q ss_pred HhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCC----Ch-hhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCc
Q 006211 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT----ST-QGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDE 505 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 505 (656)
...+|.+.+.||+|+||.|+.| ...+++.||+|++... .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 4567889999999999999999 4456899999977653 11 23446678999999999 9999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEeccCc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGMA 584 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~DfGla 584 (656)
.++||||+.+|+|.+++.+ ...+.+.++..++.|++.|++|+|+.+ |+||||||+|||++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 9999999999999999965 345888999999999999999999998 9999999999999999 99999999999
Q ss_pred cccccCccccccccccccccccccccccCCC-CC-ccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGI-YS-MKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..... ........+||+.|+|||++.+.. |+ .++||||+||+||-|++|+-||....
T Consensus 169 ~~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~ 227 (370)
T KOG0583|consen 169 AISPG--EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN 227 (370)
T ss_pred cccCC--CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence 87631 223344569999999999999877 75 78999999999999999999998744
No 40
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=305.25 Aligned_cols=206 Identities=28% Similarity=0.512 Sum_probs=175.1
Q ss_pred HHHHHHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc
Q 006211 428 SDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505 (656)
Q Consensus 428 ~~~~~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 505 (656)
.++....+.+.+.+.||+|+||+||+|.+- ..||||++... ..+..+.|++|+..+++-+|.||+-++|+|.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 445555566678899999999999999873 36999999765 44567889999999999999999999999987666
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.||+.+|+|-+|..+++... ..++..+.+.|+.||++||.|||.++ |||||||..||++.+++.|||+|||++.
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred -eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEeccccee
Confidence 99999999999999997644 45888999999999999999999998 9999999999999999999999999997
Q ss_pred ccccCccccccccccccccccccccccC---CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKK---GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.-..-..........|...|||||++.. .+|+..+||||||+++|||+||..|+..
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi 595 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI 595 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC
Confidence 4322112223334467889999999864 5689999999999999999999999983
No 41
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-35 Score=289.23 Aligned_cols=206 Identities=23% Similarity=0.356 Sum_probs=178.5
Q ss_pred hcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.+.|++.+.||.|..++||+| +.+.+..||||++..+.. ...+.+++|+..|..++||||++.+..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 457889999999999999999 567789999999986533 336789999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
||.+|++.+++...... .+++..+..|++++++||.|||.++ .||||||+.||||+.+|.|||+|||.+..+....
T Consensus 105 fMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999999998664443 3889999999999999999999998 9999999999999999999999999876554332
Q ss_pred cccc--cccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEAN--TGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~--~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.+.. ....+||+.|||||++.. ..|+.|+||||||++..||.+|..||..+.
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p 236 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP 236 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC
Confidence 2221 145689999999999543 458999999999999999999999997654
No 42
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=313.05 Aligned_cols=205 Identities=28% Similarity=0.492 Sum_probs=176.1
Q ss_pred CCCCCCcccccCceEEEEEEeC----CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP----RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
...+.++||.|.||+|++|+++ ....||||.++... ++.+.+|+.|..||.+++||||++|.|+........||.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 3456689999999999999663 34579999998764 455678999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
|||++|+|+.+|+... ..+++.++.-++++|+.||.||.+++ +|||||.++|||++.+..+|++|||+++.+..+
T Consensus 710 EyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvledd 784 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 784 (996)
T ss_pred hhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeecccC
Confidence 9999999999997644 45889999999999999999999998 999999999999999999999999999987654
Q ss_pred ccccccccc--cccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCCcc
Q 006211 591 VDEANTGRI--VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGTSE 646 (656)
Q Consensus 591 ~~~~~~~~~--~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~~~ 646 (656)
.+ ...... .=+.+|.|||.+....+|.+|||||||+++||.++ |.+|+..+.+.+
T Consensus 785 ~~-~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd 842 (996)
T KOG0196|consen 785 PE-AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 842 (996)
T ss_pred CC-ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence 42 222222 22578999999999999999999999999999765 888987665543
No 43
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.3e-35 Score=279.60 Aligned_cols=204 Identities=24% Similarity=0.346 Sum_probs=170.0
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhh--HHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQG--LEEFKNEVSLTARLQHVNLLRVLGYCTER--DENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 509 (656)
++|+.+++|++|+||.||+|+. .+++.||+|+++...+.. --.-++|+.+|.+++|||||.+..+.... +..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 4577889999999999999954 568899999998764321 11347899999999999999998877543 568999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||||+. +|...+... +..+...+...++.|+++|++|||.+. |+||||||+|+|+...|.+||+|||+|+.+..
T Consensus 156 Me~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999965 677777543 245788999999999999999999998 99999999999999999999999999998765
Q ss_pred CccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCCcc
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~~~ 646 (656)
. .......+-|..|.|||.+.+ ..|+...|+||+|||+.||+++++-|.+.+.-+
T Consensus 230 p--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d 285 (419)
T KOG0663|consen 230 P--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID 285 (419)
T ss_pred C--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH
Confidence 3 233445677999999998876 458999999999999999999999887655433
No 44
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-34 Score=304.99 Aligned_cols=203 Identities=23% Similarity=0.348 Sum_probs=173.6
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|+..+.||+|+||+||++.. .+++.||+|+++... ......+.+|+.++.+++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688899999999999999954 468899999987532 233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 99999999998853 345899999999999999999999987 999999999999999999999999998754321
Q ss_pred ccc---------------------------------cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCC
Q 006211 591 VDE---------------------------------ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKR 637 (656)
Q Consensus 591 ~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~ 637 (656)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 000 00123479999999999999899999999999999999999999
Q ss_pred CCCCCC
Q 006211 638 NARYYG 643 (656)
Q Consensus 638 p~~~~~ 643 (656)
||....
T Consensus 235 Pf~~~~ 240 (363)
T cd05628 235 PFCSET 240 (363)
T ss_pred CCCCCC
Confidence 997544
No 45
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-34 Score=300.17 Aligned_cols=198 Identities=29% Similarity=0.422 Sum_probs=175.1
Q ss_pred CCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
-|+..+.||.|+-|.|..| +..+|+.+|||++.+.. ......+.+|+-+|+.+.|||++++++++++...+|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 3667889999999999999 45689999999987652 2223468899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++|.|.+++. +++.+++.++.+++.||+.|+.|+|..+ |+|||+||+|+|||..+++||+|||+|.+...
T Consensus 93 yv~gGELFdylv---~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-- 164 (786)
T KOG0588|consen 93 YVPGGELFDYLV---RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP-- 164 (786)
T ss_pred ecCCchhHHHHH---hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC--
Confidence 999999999984 4667999999999999999999999998 99999999999999999999999999976432
Q ss_pred cccccccccccccccccccccCCCC-CccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIY-SMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....+.||++.|.|||++.+.+| +.++||||.|||||.||||+.||+..
T Consensus 165 -gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd 215 (786)
T KOG0588|consen 165 -GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD 215 (786)
T ss_pred -CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc
Confidence 233345699999999999999988 57899999999999999999999743
No 46
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9e-35 Score=284.90 Aligned_cols=202 Identities=26% Similarity=0.441 Sum_probs=180.8
Q ss_pred HhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
...+|++.+.||+|.||.|-++. ...|+.||||.+++.. ++..-.+.+|++||..|+||||+.++.+|++.+...|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence 45678999999999999999994 4679999999987753 3444568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
||||..+|.|.+|+.+ +..+++.+++.++.||..++.|+|.+. ++|||||.+|||+|.|+++||+|||++-++.
T Consensus 131 vMEYaS~GeLYDYiSe---r~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 131 VMEYASGGELYDYISE---RGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEEecCCccHHHHHHH---hccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhc
Confidence 9999999999999954 456999999999999999999999987 9999999999999999999999999998775
Q ss_pred cCccccccccccccccccccccccCCCC-CccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIY-SMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.. ....++||++-|.+||++.+.+| .+.+|-|||||+||.|+.|.-||++.+
T Consensus 205 ~~---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D 257 (668)
T KOG0611|consen 205 DK---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD 257 (668)
T ss_pred cc---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch
Confidence 43 23345799999999999999998 578999999999999999999998765
No 47
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-34 Score=285.80 Aligned_cols=204 Identities=26% Similarity=0.445 Sum_probs=168.2
Q ss_pred HHhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCCh--------------hhHHHHHHHHHHHHhcCCCceeeE
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATST--------------QGLEEFKNEVSLTARLQHVNLLRV 496 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l 496 (656)
..-++|++.+.||+|.||.|-+|+ ..+++.||||++.+... ...+.+.+|+.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 345789999999999999999995 45689999999875411 123578999999999999999999
Q ss_pred EEEEee--CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC
Q 006211 497 LGYCTE--RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL 574 (656)
Q Consensus 497 ~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~ 574 (656)
+.+..+ .+..|||+|||..|.+... +..+..+++++++.++..+..||+|||.++ ||||||||.|+||+++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence 998865 4578999999999887532 223333899999999999999999999998 99999999999999999
Q ss_pred cEEEEeccCccccccCc---cccccccccccccccccccccCCC----CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 575 NPKISDFGMAKLFRKDV---DEANTGRIVGTYGYVPPEYVKKGI----YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 575 ~~kl~DfGla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.+||+|||.+..+.... ........+||+.|+|||.+..+. .+.+.||||+||+||.|+.|+.||..
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~ 321 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFD 321 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCccc
Confidence 99999999997653221 111222368999999999887632 35679999999999999999999954
No 48
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=100.00 E-value=1.7e-33 Score=275.88 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=144.4
Q ss_pred CCCCCCCCCC--ccEEEEEEE-EecC----CCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCccccccCCc
Q 006211 39 FPLSDINSAL--FTHLICAFA-EVDS----STYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQSILGNK 111 (656)
Q Consensus 39 ~~~~~i~~~~--~thi~~~f~-~~~~----~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~~~~Gg~ 111 (656)
..+++||.+. ||||||||+ ..+. .++.+.....++......+..+|++||++|||+|| |||
T Consensus 13 ~~~~dip~~~~~~thii~aFa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~p~lKvllSi------------GG~ 80 (253)
T cd06544 13 VTFSDVPINPKVEFHFILSFAIDYDTESNPTNGKFNPYWDTENLTPEAVKSIKAQHPNVKVVISI------------GGR 80 (253)
T ss_pred ccccccCCCCCeeEEEEEEeeeecccccCCCCCccccccCccccCHHHHHHHHHhCCCcEEEEEe------------CCC
Confidence 4789999999 999999999 3332 13444433334444666778999999999999999 555
Q ss_pred CCCc-cccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCcchHHHHHHHHHhhcCCCCCcEEEEEeecCCC
Q 006211 112 NINP-SVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDLNSLGILLDEWKASASDQPELTLSMAVRYSPT 190 (656)
Q Consensus 112 ~~~~-~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~~~~~~ll~~lr~~l~~~~~~~ls~a~~~~~~ 190 (656)
+.+. ..+....+.+..|++|++|+++++++|||||||||||||. .|+++|+.|+++||++|.+. ++++.+++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~fv~S~~~~l~~~~fDGiDiDwE~~~-~d~~~f~~ll~~l~~~l~~~-~~lt~a~vap~~~ 158 (253)
T cd06544 81 GVQNNPTPFDPSNVDSWVSNAVSSLTSIIQTYNLDGIDIDYEHFP-ADPDTFVECIGQLITELKNN-GVIKVASIAPSED 158 (253)
T ss_pred CCCCCccccCchhhhhHHHHHHHHHHHHHHHhCCCceeeecccCC-cCHHHHHHHHHHHHHHhhhc-CCeEEEEecCCcc
Confidence 4432 1233344555667778999999999999999999999995 57999999999999999543 4444444443332
Q ss_pred ccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCceeecccCCCCCcC
Q 006211 191 HETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVLGARASGPGIT 268 (656)
Q Consensus 191 ~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG~~~~ 268 (656)
... .+.++.+.+++|+|++|+||+++.. .+ ...+ ...+..+.|. .++|++|+++|+|++++.|.
T Consensus 159 ~~~-~~y~~~~~~~~d~id~~~~qfy~~~-~~--~~~~---------~~~~~~~~~~-~~~p~~Kv~lGl~a~~~~~~ 222 (253)
T cd06544 159 AEQ-SHYLALYNAYGDYIDYVNYQFYNYG-VP--TTVA---------KYVEFYDEVA-NNYPGKKVLASFSTDGEDGA 222 (253)
T ss_pred ccc-cccHHHHHHhhCceeEEEhhhhCCC-CC--CCHH---------HHHHHHHHHH-hCCCcccEEEEEecCCCccC
Confidence 213 3558899999999999999999542 11 1000 1123344443 47999999999999997553
No 49
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-34 Score=281.76 Aligned_cols=211 Identities=23% Similarity=0.305 Sum_probs=180.1
Q ss_pred cCCCCCCcccccCceEEEEEEeCC-CCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
+.|+.++.||.|.-|+||+++... +..+|+|++.+... +...+.+.|-+||..++||.++.|+..++.+...|++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456677899999999999997754 58899999987633 33456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
|||+||+|..+.+. +....+++..++.++.+++.||+|||-+| ||.|||||+||||.++|++-|+||.++......
T Consensus 157 eyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999877654 44556999999999999999999999998 999999999999999999999999988542100
Q ss_pred --------------------------------c-c---------------------ccccccccccccccccccccCCCC
Q 006211 591 --------------------------------V-D---------------------EANTGRIVGTYGYVPPEYVKKGIY 616 (656)
Q Consensus 591 --------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 616 (656)
. . ..+....+||..|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 011223589999999999999999
Q ss_pred CccchhHHHHHHHHHHHcCCCCCCCCCCccccc
Q 006211 617 SMKYDVYSFGVLLLQIISSKRNARYYGTSENLN 649 (656)
Q Consensus 617 s~~sDvwslGvil~elltg~~p~~~~~~~~~~~ 649 (656)
+.++|.|+||+++||||.|+.||.+.+.++++.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~ 345 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR 345 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHH
Confidence 999999999999999999999999988877653
No 50
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=294.13 Aligned_cols=199 Identities=28% Similarity=0.456 Sum_probs=172.8
Q ss_pred CccccCHHHHHHHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEE
Q 006211 421 NLQVFSFSDIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYC 500 (656)
Q Consensus 421 ~~~~~~~~~~~~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 500 (656)
.+-.++|+++.. ++.||.|+.|.||+|++ .++.||||.++... ..+|+.|++|+||||+.+.|+|
T Consensus 117 e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl-~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 117 ELWEIPFEEISE-------LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhccCCHHHhhh-------hhhhccCcccceeeeec-cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeee
Confidence 344556666554 48899999999999998 57889999876543 3478899999999999999999
Q ss_pred eeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEe
Q 006211 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISD 580 (656)
Q Consensus 501 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~D 580 (656)
.....+|||||||..|-|...|.. +..++......+..+||.||.|||... |||||||.=||||..+..+||+|
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsD 255 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISD 255 (904)
T ss_pred cCCceeEEeeeccccccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEecc
Confidence 999999999999999999999954 445788889999999999999999987 99999999999999999999999
Q ss_pred ccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 581 FGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 581 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
||-++..... ...-.+.||..|||||++.+.+.+.|+|||||||+|||||||..|+..-+
T Consensus 256 FGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd 315 (904)
T KOG4721|consen 256 FGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD 315 (904)
T ss_pred ccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc
Confidence 9999875432 22234689999999999999999999999999999999999999996543
No 51
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.9e-35 Score=268.39 Aligned_cols=203 Identities=30% Similarity=0.419 Sum_probs=177.7
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|-||.||.|+. +++-.||+|++.++.. +...++.+|+++-..|+||||++++++|.++...|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 4688899999999999999955 4577899999876532 22357889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||...|++...|.+.. ...+++.....++.|+|.|+.|+|..+ +|||||||+|+|++..+.+||+|||.+..-.
T Consensus 102 Eya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 9999999998886533 335788889999999999999999988 9999999999999999999999999997532
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
.......+||..|.+||+..+..++..+|+|++|++.||++.|.+||+....+
T Consensus 176 --~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~ 228 (281)
T KOG0580|consen 176 --SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS 228 (281)
T ss_pred --CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH
Confidence 33445679999999999999999999999999999999999999999765533
No 52
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=280.20 Aligned_cols=211 Identities=24% Similarity=0.398 Sum_probs=174.8
Q ss_pred HhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccC--CChhhHHHHHHHHHHHHhcCCCceeeEEEEEee-----CC
Q 006211 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE-----RD 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 504 (656)
+...|...+.||+|+||.|+.+ ...+|+.||||.+.. ......++..+|+.+|+.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445666789999999999999 456789999999873 344456678999999999999999999998865 34
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..|+|+|+| +.+|...+.. +..++...+..+++|+++||.|+|+.+ ++||||||.|+|++.+..+||+|||+|
T Consensus 100 DvYiV~elM-etDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccce
Confidence 679999999 5678777743 334899999999999999999999998 999999999999999999999999999
Q ss_pred cccccCcccccccccccccccccccccc-CCCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccccc
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNF 650 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~~~ 650 (656)
+...........+..+.|..|.|||++. ...|+...||||+|||+.||++|++-|.+.+.-+++.+
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~l 239 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQL 239 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHH
Confidence 9775432222334457899999999764 56799999999999999999999999987765554443
No 53
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.2e-34 Score=302.45 Aligned_cols=202 Identities=23% Similarity=0.344 Sum_probs=171.7
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.|+.++.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999954 568899999986542 2345578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++|+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 9999999988853 335788899999999999999999987 9999999999999999999999999986431100
Q ss_pred c---------------------------------------------ccccccccccccccccccccCCCCCccchhHHHH
Q 006211 592 D---------------------------------------------EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFG 626 (656)
Q Consensus 592 ~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslG 626 (656)
. .......+||+.|+|||.+.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 0001234799999999999988899999999999
Q ss_pred HHHHHHHcCCCCCCCCC
Q 006211 627 VLLLQIISSKRNARYYG 643 (656)
Q Consensus 627 vil~elltg~~p~~~~~ 643 (656)
|++|||++|+.||....
T Consensus 236 ~il~elltG~~Pf~~~~ 252 (381)
T cd05626 236 VILFEMLVGQPPFLAPT 252 (381)
T ss_pred hHHHHHHhCCCCCcCCC
Confidence 99999999999997544
No 54
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.6e-33 Score=295.61 Aligned_cols=207 Identities=29% Similarity=0.428 Sum_probs=170.2
Q ss_pred hcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC-
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD- 504 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~- 504 (656)
.++|++.++||+|+||.||+|.. ..++.||||++.... ....+.+.+|+.++..+ +||||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 45788999999999999999953 235689999987543 23345788999999999 8999999999887644
Q ss_pred ceEEEEEecCCCChhhhhhCCCc---------------------------------------------------------
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIR--------------------------------------------------------- 527 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 527 (656)
..+++|||+++|+|..++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999988854211
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccccccccccc
Q 006211 528 --RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGY 605 (656)
Q Consensus 528 --~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y 605 (656)
...+++.++..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 124778889999999999999999987 999999999999999999999999999865432222222333456789
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 606 VPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 606 ~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~ 281 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQ 281 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999998889999999999999999997 999987643
No 55
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.8e-34 Score=278.68 Aligned_cols=203 Identities=26% Similarity=0.405 Sum_probs=168.9
Q ss_pred cCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChh--hHHHHHHHHHHHHhcCCCc-eeeEEEEEeeCC------
Q 006211 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQ--GLEEFKNEVSLTARLQHVN-LLRVLGYCTERD------ 504 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~------ 504 (656)
..|+.+++||+|+||+||+|. ..+|+.||+|+++...++ ......+|+.++++++|+| |+++.+++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 346667889999999999994 456899999998876442 2234588999999999999 999999998877
Q ss_pred ceEEEEEecCCCChhhhhhCCCcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRR-YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
..++|+||++ -+|..++...... ..++......++.||++||.|||+.+ |+||||||+||||+++|.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence 7889999995 5788887543321 34677889999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
|+.+.-. .......++|..|.|||++.+. .|+...||||+||++.||+++++-|....
T Consensus 167 Ara~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s 225 (323)
T KOG0594|consen 167 ARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS 225 (323)
T ss_pred HHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc
Confidence 9865422 2224445789999999998775 78999999999999999999988886544
No 56
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-35 Score=284.84 Aligned_cols=197 Identities=24% Similarity=0.384 Sum_probs=159.1
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ceEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----ENMLI 509 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 509 (656)
.|+..+++|.|+||.||+|.. .+++.||||+.-....- --+|+++|++++|||||+++-+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 456678999999999999965 44789999987554321 146899999999999999998886543 34589
Q ss_pred EEecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEeccCcccc
Q 006211 510 YEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGMAKLF 587 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~DfGla~~~ 587 (656)
||||+. +|...+... ..+..++...+.-+..||++||.|||+.+ |+||||||+|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999986 666666432 12345777888889999999999999976 9999999999999987 89999999999987
Q ss_pred ccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 588 RKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 588 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..+..... ..-|..|.|||.+.+ ..|+.+.||||.||++.||+-|++-|.+..
T Consensus 177 ~~~epniS---YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s 230 (364)
T KOG0658|consen 177 VKGEPNIS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS 230 (364)
T ss_pred ccCCCcee---EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC
Confidence 66543322 244789999998765 579999999999999999999999887643
No 57
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=298.57 Aligned_cols=204 Identities=31% Similarity=0.455 Sum_probs=171.9
Q ss_pred hcCCCCCCcccccCceEEEEEEeCC--C--CE-EEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPR--G--QE-FAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~--~--~~-vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 505 (656)
.++....++||+|+||.||+|.+.. + .. ||||..+.. ..+...++.+|.++|++++|||||+++|++..+.+
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3444566899999999999996533 2 23 899998853 35667789999999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
+++|||+|+||+|.++|..... .++..+.+.++.+.++||+|||+++ ++||||.++|+|++.++.+||+|||+++
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999999999965322 5899999999999999999999998 9999999999999999999999999997
Q ss_pred ccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGT 644 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~ 644 (656)
.-.. .......-.-+..|+|||.+....|+.++|||||||++||+++ |..|+.....
T Consensus 311 ~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~ 368 (474)
T KOG0194|consen 311 AGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN 368 (474)
T ss_pred CCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH
Confidence 5431 1111111134679999999999999999999999999999999 7888876553
No 58
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.4e-33 Score=285.78 Aligned_cols=200 Identities=26% Similarity=0.391 Sum_probs=171.3
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
|+..+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++.+++|+|++++.+.+.+.+..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999954 578999999886542 22234578899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++|+|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++.......
T Consensus 82 ~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 82 MNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred cCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 9999998777532 2235889999999999999999999987 9999999999999999999999999997653221
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 205 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK 205 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence 1223468999999999999999999999999999999999999997543
No 59
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.6e-34 Score=302.07 Aligned_cols=203 Identities=24% Similarity=0.329 Sum_probs=171.6
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||++.. .+++.||||++... .....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4688899999999999999954 57889999998653 2233456888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99999999988853 345788899999999999999999987 999999999999999999999999999643210
Q ss_pred ccc------------c---------------------------------ccccccccccccccccccCCCCCccchhHHH
Q 006211 591 VDE------------A---------------------------------NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSF 625 (656)
Q Consensus 591 ~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwsl 625 (656)
... . .....+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0 0012468999999999998889999999999
Q ss_pred HHHHHHHHcCCCCCCCCC
Q 006211 626 GVLLLQIISSKRNARYYG 643 (656)
Q Consensus 626 Gvil~elltg~~p~~~~~ 643 (656)
||++|||++|+.||....
T Consensus 235 Gvil~elltG~~Pf~~~~ 252 (377)
T cd05629 235 GAIMFECLIGWPPFCSEN 252 (377)
T ss_pred chhhhhhhcCCCCCCCCC
Confidence 999999999999996543
No 60
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=288.63 Aligned_cols=202 Identities=27% Similarity=0.408 Sum_probs=178.2
Q ss_pred CCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.|...+.||+|+||.||+| +...++.||+|++... .+...+++++|+.++.+++++||.++++.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4667789999999999999 4557899999999875 3455788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
.+|++.+.+. ....+++....-+++++..|+.|||..+ .+|||||+.|||+..+|.+||+|||.+..+......
T Consensus 94 ~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~r 167 (467)
T KOG0201|consen 94 GGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKR 167 (467)
T ss_pred cCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhc
Confidence 9999988883 2334577888889999999999999987 999999999999999999999999999877654333
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
....+||+.|||||+++...|+.|+||||||++.+||.+|.+|+....+-
T Consensus 168 --r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm 217 (467)
T KOG0201|consen 168 --RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM 217 (467)
T ss_pred --cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc
Confidence 35679999999999999889999999999999999999999999765553
No 61
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.3e-33 Score=289.80 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=172.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||+|... +++.||+|++.... .+..+.+.+|+.++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999654 68899999986532 233456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++.. ...+++.....++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 99999999988853 335888999999999999999999987 999999999999999999999999999765321
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 155 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~ 202 (291)
T cd05612 155 -----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN 202 (291)
T ss_pred -----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 123468999999999998889999999999999999999999997543
No 62
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=9.6e-34 Score=302.25 Aligned_cols=202 Identities=24% Similarity=0.358 Sum_probs=171.3
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.|+.+++||+|+||+||+|.. .+++.+|+|++.... ....+.+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 578889999999999999954 568899999986532 2334578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++|+|..++.. ...+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 9999999988853 235788899999999999999999987 9999999999999999999999999975331100
Q ss_pred c---------------------------------------------ccccccccccccccccccccCCCCCccchhHHHH
Q 006211 592 D---------------------------------------------EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFG 626 (656)
Q Consensus 592 ~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslG 626 (656)
. .......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0 0001234689999999999988999999999999
Q ss_pred HHHHHHHcCCCCCCCCC
Q 006211 627 VLLLQIISSKRNARYYG 643 (656)
Q Consensus 627 vil~elltg~~p~~~~~ 643 (656)
|++|||++|+.||....
T Consensus 236 vil~elltG~~Pf~~~~ 252 (382)
T cd05625 236 VILYEMLVGQPPFLAQT 252 (382)
T ss_pred HHHHHHHhCCCCCCCCC
Confidence 99999999999997543
No 63
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=316.29 Aligned_cols=202 Identities=32% Similarity=0.544 Sum_probs=172.3
Q ss_pred cCCCCCCcccccCceEEEEEEeCC--CC----EEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR--GQ----EFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
.+.+..+.||+|.||.||+|...+ +. .||||.++.. +.+...+|++|..+|+.++|||||+++|+|.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345567889999999999995432 32 5899998765 4566778999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 508 LIYEYLPNKSLDLYLFDPI----RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
|++|||++|+|..+|++.. ....++..+++.++.+||+|+.||++++ +|||||..+|+||++...+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccch
Confidence 9999999999999997642 2456899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
|+.+.............-+.+|||||.+....++.|+|||||||++||++|...+.
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~P 904 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATP 904 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCC
Confidence 99554433333333334467999999999999999999999999999999965544
No 64
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.2e-33 Score=299.73 Aligned_cols=203 Identities=23% Similarity=0.361 Sum_probs=173.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||+||++.. .+++.||||++.... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 4688999999999999999965 468899999987532 233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++|+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 99999999998854 335899999999999999999999987 999999999999999999999999998754321
Q ss_pred cccc------------------------------------ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc
Q 006211 591 VDEA------------------------------------NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634 (656)
Q Consensus 591 ~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt 634 (656)
.... .....+||+.|+|||++....++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 1000 0012468999999999998889999999999999999999
Q ss_pred CCCCCCCCC
Q 006211 635 SKRNARYYG 643 (656)
Q Consensus 635 g~~p~~~~~ 643 (656)
|+.||....
T Consensus 235 G~~Pf~~~~ 243 (364)
T cd05599 235 GYPPFCSDN 243 (364)
T ss_pred CCCCCCCCC
Confidence 999996543
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-33 Score=295.49 Aligned_cols=199 Identities=23% Similarity=0.368 Sum_probs=174.0
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+.++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999664 58899999987542 233456888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 99999999998843 335788999999999999999999987 99999999999999999999999999975432
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~ 203 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP 203 (333)
T ss_pred ----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH
Confidence 22335789999999999988999999999999999999999999975443
No 66
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.7e-33 Score=291.73 Aligned_cols=195 Identities=24% Similarity=0.313 Sum_probs=167.9
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||++.. .+++.||+|+++... ......+.+|+.++.+++||||+++.+.+...+..++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999955 568899999987532 233456788999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccc
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 596 (656)
+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~--~~~~ 152 (323)
T cd05571 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD--GATM 152 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC--CCcc
Confidence 99888753 345889999999999999999999987 999999999999999999999999998753221 1222
Q ss_pred ccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 597 ~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~ 199 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC
Confidence 34578999999999999899999999999999999999999996543
No 67
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-33 Score=301.16 Aligned_cols=204 Identities=22% Similarity=0.341 Sum_probs=172.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||++.. .+++.||||++.... ......+.+|+.++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 3688999999999999999954 468899999986532 223456789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.||+.||.|||+++ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 99999999998854 335788889999999999999999987 999999999999999999999999997532100
Q ss_pred c-----------------------------------------cccccccccccccccccccccCCCCCccchhHHHHHHH
Q 006211 591 V-----------------------------------------DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLL 629 (656)
Q Consensus 591 ~-----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil 629 (656)
. ........+||+.|+|||++.+..++.++|||||||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0 00001134789999999999999999999999999999
Q ss_pred HHHHcCCCCCCCCCC
Q 006211 630 LQIISSKRNARYYGT 644 (656)
Q Consensus 630 ~elltg~~p~~~~~~ 644 (656)
|||++|+.||.....
T Consensus 235 yell~G~~Pf~~~~~ 249 (376)
T cd05598 235 YEMLVGQPPFLADTP 249 (376)
T ss_pred eehhhCCCCCCCCCH
Confidence 999999999976543
No 68
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=278.68 Aligned_cols=199 Identities=28% Similarity=0.460 Sum_probs=162.2
Q ss_pred HHHHHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHH--HHhcCCCceeeEEEEEeeCC--
Q 006211 429 DIKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSL--TARLQHVNLLRVLGYCTERD-- 504 (656)
Q Consensus 429 ~~~~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~~~-- 504 (656)
-...+..+..+.+.||+|.||+||+|++ .|+.||||++....+.. ..+|.++ -..|+|+||+.+++.-..+.
T Consensus 205 VQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE~S---WfrEtEIYqTvmLRHENILgFIaaD~~~~gs 280 (513)
T KOG2052|consen 205 VQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDERS---WFRETEIYQTVMLRHENILGFIAADNKDNGS 280 (513)
T ss_pred hHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEecccchhh---hhhHHHHHHHHHhccchhhhhhhccccCCCc
Confidence 3345677888999999999999999998 78999999998765543 3445554 45579999999987654432
Q ss_pred --ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCcEecccCCCCEEEcCCCcEE
Q 006211 505 --ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-----YSNFRVIHRDLKASNILLDNELNPK 577 (656)
Q Consensus 505 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-----~~~~~iiH~Dikp~NILl~~~~~~k 577 (656)
+++||.+|.+.|||.+||. +..++....++++..++.||++||- ++.+.|.|||||+.|||+..++.+.
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~ 356 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLN----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 356 (513)
T ss_pred eEEEEEeeecccCCcHHHHHh----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEE
Confidence 5799999999999999993 4679999999999999999999993 6778899999999999999999999
Q ss_pred EEeccCccccccCcc--ccccccccccccccccccccCCC----C-C-ccchhHHHHHHHHHHHcC
Q 006211 578 ISDFGMAKLFRKDVD--EANTGRIVGTYGYVPPEYVKKGI----Y-S-MKYDVYSFGVLLLQIISS 635 (656)
Q Consensus 578 l~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~-s-~~sDvwslGvil~elltg 635 (656)
|+|+|+|........ .......+||.+|||||++.... + + ..+||||||+++||+.-.
T Consensus 357 IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarR 422 (513)
T KOG2052|consen 357 IADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARR 422 (513)
T ss_pred EeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999987654422 22344579999999999986432 2 2 248999999999998754
No 69
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2e-33 Score=293.43 Aligned_cols=197 Identities=24% Similarity=0.335 Sum_probs=172.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.+++||||+++++.+...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46788899999999999999654 58899999986532 233456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 99999999988854 335788899999999999999999987 999999999999999999999999999765322
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 172 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 172 -----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred -----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 12347899999999999988999999999999999999999999653
No 70
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2e-33 Score=294.27 Aligned_cols=198 Identities=21% Similarity=0.304 Sum_probs=171.8
Q ss_pred cCCCCCCcccccCceEEEEEEeCC--CCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR--GQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~--~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
++|++.+.||+|+||.||+|.... +..||+|++... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468889999999999999996433 368999998643 223445688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999988853 335889999999999999999999987 99999999999999999999999999976532
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 184 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 184 R-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred C-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence 1 223578999999999988889999999999999999999999997543
No 71
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.8e-33 Score=297.87 Aligned_cols=203 Identities=22% Similarity=0.312 Sum_probs=172.2
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
..++|++.+.||+|+||.||++... +++.+|+|++... .....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3467999999999999999999654 5889999998642 22234457889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
||||+++|+|..++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 9999999999988843 24788899999999999999999987 9999999999999999999999999998654
Q ss_pred cCccccccccccccccccccccccCC----CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKG----IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
... ........||+.|+|||++... .++.++|+|||||++|||++|+.||....
T Consensus 194 ~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 194 ETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred cCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 321 1122345799999999998654 37889999999999999999999996543
No 72
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.4e-33 Score=290.61 Aligned_cols=195 Identities=24% Similarity=0.321 Sum_probs=167.9
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||++.. .+++.||+|++... .......+.+|+.+++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999954 46899999998754 2234457788999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccc
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 596 (656)
+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~--~~~~ 152 (328)
T cd05593 81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD--AATM 152 (328)
T ss_pred CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc--cccc
Confidence 99887743 335889999999999999999999987 999999999999999999999999998753221 1122
Q ss_pred ccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 597 ~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~ 199 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC
Confidence 33578999999999998889999999999999999999999996544
No 73
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.4e-33 Score=289.42 Aligned_cols=195 Identities=24% Similarity=0.315 Sum_probs=167.2
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||++.. .++..||+|+++.. .......+.+|+.+++.++||||+++++.+...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999964 46899999998754 2233456778999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccc
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANT 596 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 596 (656)
+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++..... ....
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~--~~~~ 152 (323)
T cd05595 81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATM 152 (323)
T ss_pred cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCC--CCcc
Confidence 99887743 335889999999999999999999987 999999999999999999999999998753221 1122
Q ss_pred ccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 597 ~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 199 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC
Confidence 23568999999999998899999999999999999999999996543
No 74
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.9e-34 Score=290.38 Aligned_cols=205 Identities=23% Similarity=0.379 Sum_probs=180.5
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc-eEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE-NMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 510 (656)
++|..++++|+|+||.++.++. .+++.+++|.+... .....+...+|+.++++++|||||.+.+.+..++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5688899999999999999844 45779999988654 33444567899999999999999999999998888 99999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
+||+||++...+.... +..+++++...++.|++.|+.|||+++ |+|||||+.||+++.+..+||+|||+|+.+...
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999886543 456899999999999999999999887 999999999999999999999999999987654
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
. ......+||+.||+||++.+.+|+.|+|||||||++|||++-+++|...+..
T Consensus 160 ~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~ 212 (426)
T KOG0589|consen 160 D--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS 212 (426)
T ss_pred h--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH
Confidence 3 2445579999999999999999999999999999999999999999765543
No 75
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.4e-33 Score=286.64 Aligned_cols=192 Identities=24% Similarity=0.311 Sum_probs=166.3
Q ss_pred ccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||+|+||.||++.. .+++.||+|+++.. .......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999965 45889999998653 233445678899999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 152 (312)
T cd05585 81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNT 152 (312)
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccc
Confidence 988853 335889999999999999999999987 9999999999999999999999999997543221 22234
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 57899999999999989999999999999999999999999653
No 76
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.3e-33 Score=295.31 Aligned_cols=207 Identities=23% Similarity=0.318 Sum_probs=173.9
Q ss_pred HHHHHhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 006211 429 DIKAATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD 504 (656)
Q Consensus 429 ~~~~~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 504 (656)
++....++|++.+.||+|+||.||++... +++.+|+|++... .....+.+.+|+.+++.++||||+++++.+.+..
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445578999999999999999999654 6889999998642 1223345788999999999999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..++||||+++|+|..++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 99999999999999988843 34788889999999999999999987 999999999999999999999999999
Q ss_pred cccccCccccccccccccccccccccccCC----CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKG----IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
+...... ........||+.|+|||++... .++.++|||||||++|||++|+.||...+
T Consensus 190 ~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 190 MKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred eEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 8654321 1122345799999999998653 37889999999999999999999997543
No 77
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.2e-33 Score=295.79 Aligned_cols=204 Identities=23% Similarity=0.348 Sum_probs=173.4
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|+..+.||+|+||.||++.. .+++.||+|+++.. .......+.+|+.++..++||||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999955 46889999998653 2233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 99999999998853 345889999999999999999999987 999999999999999999999999998754221
Q ss_pred cc---------------------------------ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCC
Q 006211 591 VD---------------------------------EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKR 637 (656)
Q Consensus 591 ~~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~ 637 (656)
.. .......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 000113478999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 006211 638 NARYYGT 644 (656)
Q Consensus 638 p~~~~~~ 644 (656)
||.....
T Consensus 235 Pf~~~~~ 241 (360)
T cd05627 235 PFCSETP 241 (360)
T ss_pred CCCCCCH
Confidence 9975543
No 78
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-32 Score=300.32 Aligned_cols=205 Identities=20% Similarity=0.264 Sum_probs=175.7
Q ss_pred CCCCCCcccccCceEEEEEEe-CC-CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.|.+.+.||+|++|.||+|.. .+ +..||+|.+..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 378889999999999999954 33 6788999876655555567788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 514 PNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 514 ~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
++|+|..++... .....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999887542 22446889999999999999999999987 99999999999999999999999999987644322
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~ 275 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS 275 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 222344578999999999998899999999999999999999999996543
No 79
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.5e-32 Score=285.49 Aligned_cols=200 Identities=24% Similarity=0.325 Sum_probs=174.0
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.++|++.+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367899999999999999999654 68889999987653 3345678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..++.. ...+++..+..++.|++.||.|||+.+ +++||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 157 (331)
T cd06649 84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (331)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc-
Confidence 9999999998854 235788999999999999999999864 4999999999999999999999999999765322
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~ 205 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP 205 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 122346899999999999888999999999999999999999999643
No 80
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.5e-32 Score=282.20 Aligned_cols=204 Identities=28% Similarity=0.439 Sum_probs=168.3
Q ss_pred cCCCCCCcccccCceEEEEEEeCC-----------------CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR-----------------GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRV 496 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 496 (656)
++|++.++||+|+||.||+|...+ +..||+|.+.... .....++.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568888999999999999996432 3369999987653 3345578999999999999999999
Q ss_pred EEEEeeCCceEEEEEecCCCChhhhhhCCC----------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEe
Q 006211 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPI----------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIH 560 (656)
Q Consensus 497 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH 560 (656)
++++.+.+..++||||+++++|..++.... ....+++.....++.|++.||.|||+.+ ++|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 999999999999999999999998874321 1124678889999999999999999987 999
Q ss_pred cccCCCCEEEcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcC--CCC
Q 006211 561 RDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISS--KRN 638 (656)
Q Consensus 561 ~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg--~~p 638 (656)
|||||+|||++.++.+||+|||+++...............++..|+|||.+....++.++|||||||++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999765432222222334557889999999888899999999999999999974 456
Q ss_pred CCC
Q 006211 639 ARY 641 (656)
Q Consensus 639 ~~~ 641 (656)
|..
T Consensus 242 ~~~ 244 (304)
T cd05096 242 YGE 244 (304)
T ss_pred CCc
Confidence 543
No 81
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi.
Probab=100.00 E-value=5.4e-32 Score=267.55 Aligned_cols=196 Identities=15% Similarity=0.226 Sum_probs=143.8
Q ss_pred EEEEEecCCCC--------CCCCCCCCCCccEEEEEEEEecCCCcEEecCCcc--hh---hHHHHHHHHHhhCCCceEEE
Q 006211 28 IKAGYWLAGRE--------FPLSDINSALFTHLICAFAEVDSSTYQLSISSAN--QQ---YFSIFANSVRRKNPSIKTLL 94 (656)
Q Consensus 28 ~~~~y~~~~~~--------~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~--~~---~~~~~~~~~k~~~~~~kvl~ 94 (656)
++++||+.|+. +++..++.++||||+|||+.++++| .+...+.. .. .+...+..+| ++++|||+
T Consensus 1 r~v~y~~~~~~~~~~~~~~~~~~~~~~~~~THvi~af~~i~~~G-~l~~~d~~~~~~~~~~~~~~i~~~~--~~g~KVll 77 (256)
T cd06546 1 RLVIYYQTTHPSNGDPISSLLLVTEKGIALTHLIVAALHINDDG-NIHLNDHPPDHPRFTTLWTELAILQ--SSGVKVMG 77 (256)
T ss_pred CEEEEEccEECCCCCcccccccccCCCCCCceEEEEEEEECCCC-eEEECCCCCCcchhhHHHHHHHHHH--hCCCEEEE
Confidence 35889887643 2234667899999999999999874 45444321 11 2222233344 57899999
Q ss_pred EeecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCcchHHHHHHHHHhhcC
Q 006211 95 SIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDLNSLGILLDEWKASAS 174 (656)
Q Consensus 95 sigg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~~~~~~ll~~lr~~l~ 174 (656)
|| |||+.+. |+.++++++.|++|++++.+++++|+|||||||||||.. ..+|..|+++||+++.
T Consensus 78 Si------------GG~~~~~--fs~~a~~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~p~~--~~~~~~ll~~Lr~~~~ 141 (256)
T cd06546 78 ML------------GGAAPGS--FSRLDDDDEDFERYYGQLRDMIRRRGLDGLDLDVEEPMS--LDGIIRLIDRLRSDFG 141 (256)
T ss_pred EE------------CCCCCCC--cccccCCHHHHHHHHHHHHHHHHHhCCCceEEeeecCCC--HhHHHHHHHHHHHHhC
Confidence 99 5554322 788889999999999999999999999999999999964 5699999999999993
Q ss_pred CCCCcEEEEEeecCCC----ccccccChhhhhh----ccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHH
Q 006211 175 DQPELTLSMAVRYSPT----HETVSYPIDSMKK----NLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREW 246 (656)
Q Consensus 175 ~~~~~~ls~a~~~~~~----~~~~~~~~~~l~~----~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~ 246 (656)
+++.||+|++.... ....++++.++.+ ++||+|+|.||.+|.. + + ......|
T Consensus 142 --~~~~lT~Ap~~~~~~~g~~~~~~~~~~~l~~~~~~~~Df~nvQfYn~~g~~--------~---------~-~~~~~~~ 201 (256)
T cd06546 142 --PDFIITLAPVASALTGGEANLSGFDYRELEQARGDKIDFYNAQFYNGFGSM--------S---------S-PSDYDAI 201 (256)
T ss_pred --CCcEEEECCccccccCCcccccccCHHHHHHhhCCceeEEEEcCcCCCCCc--------c---------C-HHHHHHH
Confidence 46889987754311 1222467777764 9999999999976431 0 0 1233456
Q ss_pred HHcCCCCCceeecccC
Q 006211 247 LRRGFPANKLVLGARA 262 (656)
Q Consensus 247 ~~~g~p~~Kl~lG~p~ 262 (656)
.+.++|++||++|+|+
T Consensus 202 ~~~~~~~~Kv~iGlpa 217 (256)
T cd06546 202 VAQGWDPERIVIGLLT 217 (256)
T ss_pred HHcCCCcccEEEEEec
Confidence 6679999999999996
No 82
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-32 Score=286.71 Aligned_cols=198 Identities=26% Similarity=0.375 Sum_probs=167.0
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHH---HhcCCCceeeEEEEEeeCCceEEE
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLT---ARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
|++.+.||+|+||.||++.. .+++.||||+++... ....+.+.+|..++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56788999999999999965 468999999987532 22344566676655 456799999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++++|..++. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIH----TDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 99999999987773 245899999999999999999999987 99999999999999999999999999874322
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. ........|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 154 ~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~ 205 (324)
T cd05589 154 F--GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD 205 (324)
T ss_pred C--CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Confidence 1 122234578999999999998889999999999999999999999997543
No 83
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-32 Score=285.22 Aligned_cols=196 Identities=24% Similarity=0.349 Sum_probs=166.6
Q ss_pred CCcccccCceEEEEEEe----CCCCEEEEEEccCCC----hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 440 ANKLGEGGFGPVYKGNL----PRGQEFAVKRLSATS----TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++.||+|+||.||++.. ..++.||+|+++... ......+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 36799999999999964 357899999987532 2233457889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..++.. ...+.+..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 153 (323)
T cd05584 81 YLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHE- 153 (323)
T ss_pred CCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccC-
Confidence 9999999888743 345788888999999999999999987 999999999999999999999999998743221
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
........|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 154 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 154 -GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred -CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 112223578999999999988889999999999999999999999996543
No 84
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.9e-33 Score=292.55 Aligned_cols=202 Identities=23% Similarity=0.313 Sum_probs=170.9
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
.++|++.+.||+|+||.||++.. .+++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 45788999999999999999965 46889999998643 122334577899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++|+|..++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999988743 34788889999999999999999987 99999999999999999999999999976543
Q ss_pred CccccccccccccccccccccccCC----CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKG----IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.. ........||+.|+|||++... .++.++|||||||++|||++|+.||....
T Consensus 195 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 251 (370)
T cd05596 195 NG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (370)
T ss_pred CC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence 21 1122345789999999988643 37889999999999999999999997543
No 85
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=292.40 Aligned_cols=204 Identities=28% Similarity=0.457 Sum_probs=176.8
Q ss_pred CCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------ceEE
Q 006211 437 FSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD------ENML 508 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~l 508 (656)
+...+.||+|+||.||+++ ...|+.||||.++... ....+...+|+++|++++|||||++++.-++.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 4567899999999999996 6679999999998753 344566789999999999999999998765543 5689
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC--C--cEEEEeccCc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE--L--NPKISDFGMA 584 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~--~--~~kl~DfGla 584 (656)
|||||.+|+|...+.++.+...|++.+.+.+...++.||.|||+++ |+||||||.||++-.. | .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999999988889999999999999999999999887 9999999999999533 3 3699999999
Q ss_pred cccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCCcc
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~~~ 646 (656)
+.+..+. ......||..|.+||+..+ +.|+..+|.|||||++|+..||..||.....+.
T Consensus 172 rel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk 231 (732)
T KOG4250|consen 172 RELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK 231 (732)
T ss_pred ccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc
Confidence 9775432 4456799999999999984 889999999999999999999999997666554
No 86
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.4e-33 Score=288.78 Aligned_cols=195 Identities=25% Similarity=0.313 Sum_probs=166.4
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||++.. .+++.||+|+++.. .......+..|++++..++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999954 56889999998753 2233456778999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
+|..++.. ...+++..+..++.|++.||.|||+ .+ ++||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (325)
T cd05594 81 ELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--AT 152 (325)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cc
Confidence 99887743 3358899999999999999999997 55 9999999999999999999999999987532211 12
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~ 200 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 200 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence 223468999999999998899999999999999999999999996544
No 87
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.9e-32 Score=280.78 Aligned_cols=201 Identities=24% Similarity=0.375 Sum_probs=168.3
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|+..++||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4688899999999999999955 4688999999875432 2334678899999999999999999999998899999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++ +|..++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~- 157 (288)
T cd07871 85 LDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT- 157 (288)
T ss_pred CCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC-
Confidence 975 887777432 234788999999999999999999987 9999999999999999999999999997543221
Q ss_pred ccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 158 -KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred -ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223467899999998865 568999999999999999999999996544
No 88
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.2e-32 Score=285.16 Aligned_cols=200 Identities=26% Similarity=0.327 Sum_probs=168.7
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCC-ceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHV-NLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 510 (656)
+|++.+.||+|+||.||+|... +++.||+|+++.. .....+.+..|..++..++|+ +|+++.+++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999654 5789999998753 223445678899999999765 5888999999889999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 99999999888743 335788999999999999999999987 999999999999999999999999998643221
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 155 --GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred --CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 112234578999999999999899999999999999999999999996543
No 89
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.8e-32 Score=285.57 Aligned_cols=200 Identities=26% Similarity=0.340 Sum_probs=168.6
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 510 (656)
+|++.+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++..+ +|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999654 57899999987542 22334566777887777 5899999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 99999999888743 235889999999999999999999987 999999999999999999999999999753221
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~ 205 (323)
T cd05616 155 --GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 205 (323)
T ss_pred --CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC
Confidence 112234578999999999999999999999999999999999999997644
No 90
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-32 Score=286.04 Aligned_cols=200 Identities=23% Similarity=0.345 Sum_probs=169.3
Q ss_pred CCCCCCcccccCceEEEEEEe----CCCCEEEEEEccCC----ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCce
Q 006211 436 NFSSANKLGEGGFGPVYKGNL----PRGQEFAVKRLSAT----STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 506 (656)
+|++.+.||+|+||.||++.. .+++.||+|++... .....+.+..|+.+++.+ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999854 35789999998643 122345678899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++||||+++|+|..++.. +..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 999999999999988853 345889999999999999999999987 99999999999999999999999999976
Q ss_pred cccCccccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDVDEANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+..... .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...
T Consensus 155 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 210 (332)
T cd05614 155 FLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE 210 (332)
T ss_pred ccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence 533221 222345789999999998765 4788999999999999999999999654
No 91
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.2e-33 Score=292.15 Aligned_cols=203 Identities=24% Similarity=0.389 Sum_probs=175.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||+||+|... +++.||||+++... ......+.+|+.++..++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999654 68999999987542 233456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999988543 45889999999999999999999987 999999999999999999999999999765432
Q ss_pred c---------------------------cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 V---------------------------DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. .........||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 0012233578999999999999999999999999999999999999997554
No 92
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.6e-32 Score=285.34 Aligned_cols=202 Identities=21% Similarity=0.298 Sum_probs=170.6
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||++.. .+++.||+|++... .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688899999999999999965 45889999998642 2223456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++... ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 999999999988532 335889999999999999999999987 999999999999999999999999998765432
Q ss_pred ccccccccccccccccccccccC-----CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKK-----GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. .......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 156 GT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred CC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 11 11223468999999999863 45788999999999999999999999653
No 93
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3e-32 Score=284.54 Aligned_cols=194 Identities=21% Similarity=0.346 Sum_probs=166.4
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||++.. .+++.||+|+++.. ..+..+.+..|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 4699999999999965 46889999999753 223345678899999888 799999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++..+..++.|++.||.|||+++ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--~~~ 152 (329)
T cd05588 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--GDT 152 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC--CCc
Confidence 999877743 345899999999999999999999987 999999999999999999999999998742211 122
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....||+.|+|||++.+..++.++|+|||||++|||++|+.||...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 199 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 199 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccc
Confidence 23457899999999999989999999999999999999999999653
No 94
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.6e-32 Score=282.28 Aligned_cols=195 Identities=28% Similarity=0.382 Sum_probs=163.7
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHh-cCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTAR-LQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|.. .+++.||+|+++... ....+.+..|..++.. .+||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 457899999987532 2233445566666665 4899999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~ 152 (316)
T cd05592 81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GK 152 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cc
Confidence 999888753 335888999999999999999999987 9999999999999999999999999997543221 22
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~ 200 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED 200 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Confidence 334578999999999998889999999999999999999999997543
No 95
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=7.6e-33 Score=290.24 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=168.9
Q ss_pred cCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC-C-----CceeeEEEEEeeCCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-H-----VNLLRVLGYCTERDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~ 507 (656)
-+|++++.||+|+||.|.+| +..+++.||||+++... ....+-+.|+.+|..++ | -|+|+++++|..+++.|
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 37899999999999999999 56679999999998753 33455678999999996 4 38999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC--CcEEEEeccCcc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE--LNPKISDFGMAK 585 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~--~~~kl~DfGla~ 585 (656)
||+|.+ .-+|.+++....- ..++....+.++.||+.+|.+||+++ |||+||||+||||.+. ..+||+|||.|.
T Consensus 265 iVfELL-~~NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 265 IVFELL-STNLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eeehhh-hhhHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccc
Confidence 999998 5689999866433 35899999999999999999999987 9999999999999754 369999999998
Q ss_pred ccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....... ..+.+..|.|||++.+.+|+.+.||||||||+.||++|.+-|.+.+
T Consensus 340 ~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 340 FESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred ccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 6543222 3466889999999999999999999999999999999977666443
No 96
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.1e-32 Score=278.97 Aligned_cols=201 Identities=22% Similarity=0.328 Sum_probs=171.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|++.+.||+|+||.||++... +++.+|+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999664 57899999987542 2334567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|++++++..+.. ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 999987765542 2345888999999999999999999987 9999999999999999999999999998654321
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
........|++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 155 -NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred -cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 11222346889999999998888999999999999999999999999654
No 97
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.6e-32 Score=283.83 Aligned_cols=193 Identities=22% Similarity=0.360 Sum_probs=165.3
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||++.. .+++.+|+|+++.. .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 45789999998754 223445677888888776 799999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--~~~ 152 (329)
T cd05618 81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDT 152 (329)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCC--CCc
Confidence 999877743 345889999999999999999999987 999999999999999999999999999753221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 2345789999999999999999999999999999999999999964
No 98
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2e-32 Score=286.18 Aligned_cols=202 Identities=20% Similarity=0.284 Sum_probs=171.1
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||++... +++.||+|++... .......+.+|..++..++|+||+++.+++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999654 5788999998652 1223445788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999998542 235788999999999999999999987 999999999999999999999999999765432
Q ss_pred ccccccccccccccccccccccC-----CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKK-----GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. .......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 156 GT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred Cc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 21 12223468999999998865 45788999999999999999999999643
No 99
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.98 E-value=2.7e-32 Score=284.09 Aligned_cols=195 Identities=27% Similarity=0.364 Sum_probs=165.6
Q ss_pred CcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|... +++.||+|+++.. .....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999654 5789999998753 223345567888888866 799999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (321)
T cd05591 81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VT 152 (321)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--cc
Confidence 999888743 335788999999999999999999987 9999999999999999999999999987533221 12
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 233568999999999998889999999999999999999999997544
No 100
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=4.4e-32 Score=282.41 Aligned_cols=204 Identities=28% Similarity=0.411 Sum_probs=179.9
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChh---hHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQ---GLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENM 507 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 507 (656)
....|++.+.||+|.||.||++..+ +|+.+|+|.+.+.... ..+.+.+|+.+|+++. ||||+.+.+.+++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4567888899999999999999654 4999999999776432 3468899999999998 999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC----CcEEEEeccC
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE----LNPKISDFGM 583 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~----~~~kl~DfGl 583 (656)
+|||++.||.|.+.+... .+++.++..++.|++.++.|||+.+ ++||||||+|+|+... +.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999888654 3899999999999999999999987 9999999999999644 4799999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCcc
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~ 646 (656)
+..... .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||...+..+
T Consensus 186 a~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~ 245 (382)
T KOG0032|consen 186 AKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE 245 (382)
T ss_pred ceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH
Confidence 987654 334456799999999999999999999999999999999999999998766433
No 101
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.98 E-value=5.5e-32 Score=279.43 Aligned_cols=201 Identities=24% Similarity=0.373 Sum_probs=167.5
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367899999999999999999654 688999999875432 223456789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|++ ++|..++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 996 5666666432 345788999999999999999999987 9999999999999999999999999987543211
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......+++.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 158 --HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred --ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 12223467899999998765 45788999999999999999999999753
No 102
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=4.2e-32 Score=282.35 Aligned_cols=195 Identities=26% Similarity=0.387 Sum_probs=165.7
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|.. .+++.||+|+++.. .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 45889999998753 223345667788888876 699999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--~~~ 152 (320)
T cd05590 81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--GKT 152 (320)
T ss_pred chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC--CCc
Confidence 999888743 235889999999999999999999987 999999999999999999999999998753221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 234578999999999998889999999999999999999999997554
No 103
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.98 E-value=4.4e-32 Score=287.86 Aligned_cols=207 Identities=30% Similarity=0.446 Sum_probs=170.8
Q ss_pred hcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 505 (656)
.++|++.+.||+|+||.||+|.. .++..||+|+++... ....+.+.+|+.+++.+ +|+||++++++|.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 45788999999999999999853 224579999997643 33455688999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCC-----------------------------------------------------------
Q 006211 506 NMLIYEYLPNKSLDLYLFDPI----------------------------------------------------------- 526 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 526 (656)
.++||||+++|+|..++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999998874321
Q ss_pred --------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 527 --------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 527 --------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
....+++.++.+++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++.............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1124788889999999999999999987 99999999999999999999999999976543222122222
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
..++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~ 319 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL 319 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence 335668999999988889999999999999999997 999986543
No 104
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.98 E-value=5.3e-32 Score=287.52 Aligned_cols=206 Identities=30% Similarity=0.445 Sum_probs=170.7
Q ss_pred hcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 505 (656)
.++|++.+.||+|+||.||+|.. ..+..||||+++... ....+.+.+|+.++..+ +||||++++++|.....
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45688899999999999999953 235689999987543 33445788999999999 89999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCc----------------------------------------------------------
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIR---------------------------------------------------------- 527 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 527 (656)
.++||||+++|+|..++.....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999888854211
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 528 --------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 528 --------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 124788899999999999999999987 999999999999999999999999999865433222
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
...+...++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~ 320 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGM 320 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence 22222344667999999999999999999999999999998 88888543
No 105
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.98 E-value=8.7e-33 Score=258.33 Aligned_cols=201 Identities=28% Similarity=0.443 Sum_probs=172.9
Q ss_pred HHHhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCC-----h---hhHHHHHHHHHHHHhc-CCCceeeEEEEE
Q 006211 431 KAATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATS-----T---QGLEEFKNEVSLTARL-QHVNLLRVLGYC 500 (656)
Q Consensus 431 ~~~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~-----~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 500 (656)
+...++|...+.||+|..++|.++ ..+++..+|+|++.... + +-.+.-.+|+.+|+++ .||+|+.+.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 345677888999999999999998 44578899999886431 1 1234567899999998 699999999999
Q ss_pred eeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEe
Q 006211 501 TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISD 580 (656)
Q Consensus 501 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~D 580 (656)
+.....++|+|.|+.|.|.++|.+ .-.+++++..+|+.|+..|++|||.++ |+||||||+|||++++.++||+|
T Consensus 93 es~sF~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isD 166 (411)
T KOG0599|consen 93 ESDAFVFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISD 166 (411)
T ss_pred cCcchhhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEec
Confidence 999999999999999999999954 446899999999999999999999998 99999999999999999999999
Q ss_pred ccCccccccCccccccccccccccccccccccC------CCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 581 FGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK------GIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 581 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
||.+..+... ......||||+|+|||.+.. ..|+..+|+|++||++|.|+.|.+||.
T Consensus 167 FGFa~~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 167 FGFACQLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred cceeeccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 9999887643 23345799999999998853 347888999999999999999999984
No 106
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=9.1e-32 Score=281.32 Aligned_cols=200 Identities=25% Similarity=0.338 Sum_probs=173.1
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.++|++.++||+|+||.||++... ++..+|+|++... .....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 467999999999999999999654 5788999988764 23344678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..++.. ...+++.....++.+++.+|.|||+.+ +++||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~- 157 (333)
T cd06650 84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (333)
T ss_pred cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence 9999999998853 335788999999999999999999854 3999999999999999999999999999754322
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 122346889999999999888999999999999999999999999653
No 107
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.98 E-value=5.4e-32 Score=282.38 Aligned_cols=194 Identities=22% Similarity=0.335 Sum_probs=166.1
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||++.. .+++.+|+|+++... .+..+.+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 4699999999999965 457899999997642 23445678899999888 699999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (327)
T cd05617 81 GDLMFHMQR---QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--GDT 152 (327)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCC--CCc
Confidence 999887743 335899999999999999999999987 999999999999999999999999998743221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 23457899999999999999999999999999999999999999643
No 108
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.98 E-value=6.6e-32 Score=284.94 Aligned_cols=195 Identities=25% Similarity=0.443 Sum_probs=163.4
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
.+|+..++||+|+||.||++.. .+++.||||++..... ...+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 3456778999999999999965 4689999999865433 3346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|.... ..++..+..++.||+.||.|||+.+ ++||||||+|||+++++.+||+|||+++.+.....
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999985432 3466778899999999999999987 99999999999999999999999999986543211
Q ss_pred ccccccccccccccccccccC-----CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKK-----GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
......||..|+|||.+.. ...+.++|||||||++|||++|+.||..
T Consensus 224 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 224 --PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred --cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 1223478999999998743 2245689999999999999999999974
No 109
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=3.1e-34 Score=264.17 Aligned_cols=203 Identities=26% Similarity=0.433 Sum_probs=174.2
Q ss_pred hcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
.++|++-+.||+|.|+.|+++ ..++|+.+|+|++... +....+++.+|+.|.+.++||||+++.+...+....++|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456777889999999999998 6678999999987543 3335678899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC---CCcEEEEeccCcccc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN---ELNPKISDFGMAKLF 587 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~---~~~~kl~DfGla~~~ 587 (656)
|+|.|++|..-+. .+...++..+..++.||+.+|.|.|.++ |||||+||+|+|+-. .--+||+|||++..+
T Consensus 90 e~m~G~dl~~eIV---~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIV---AREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999864442 2345788899999999999999999998 999999999999954 345999999999877
Q ss_pred ccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 588 RKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 588 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
. .........|||+|||||+++..+|+..+|||+.||+||-||.|.+||...+++
T Consensus 164 ~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~ 218 (355)
T KOG0033|consen 164 N---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 218 (355)
T ss_pred C---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH
Confidence 6 233444568999999999999999999999999999999999999999774443
No 110
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=1.2e-31 Score=273.63 Aligned_cols=196 Identities=26% Similarity=0.410 Sum_probs=166.9
Q ss_pred ccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||+|+||+||++.. .+++.+|+|.+..... ...+.+..|+.+++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999954 4688999999865422 2335677899999999999999999999999999999999999999
Q ss_pred hhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccc
Q 006211 519 DLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597 (656)
Q Consensus 519 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 597 (656)
..++.... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++..+..... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 87774422 2346899999999999999999999987 99999999999999999999999999976543221 222
Q ss_pred cccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 598 ~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||...+
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~ 201 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG 201 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 3468899999999999999999999999999999999999996543
No 111
>PHA02988 hypothetical protein; Provisional
Probab=99.98 E-value=1.2e-31 Score=273.72 Aligned_cols=193 Identities=21% Similarity=0.333 Sum_probs=164.8
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChhh---HHHHHHHHHHHHhcCCCceeeEEEEEee----CCceEEEEEe
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG---LEEFKNEVSLTARLQHVNLLRVLGYCTE----RDENMLIYEY 512 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 512 (656)
...||+|+++.||+|.. +++.||||+++...... .+.+.+|+.++.+++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999987 78899999997653322 4678899999999999999999999876 3467899999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++|+|..++.. ...+++.....++.+++.||.|||+.. +++||||||+|||+++++.+||+|||+++......
T Consensus 104 ~~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 999999999854 235888999999999999999999852 27899999999999999999999999997653221
Q ss_pred ccccccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~ 226 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT 226 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence 12357889999999876 678999999999999999999999997654
No 112
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.98 E-value=5.1e-32 Score=283.30 Aligned_cols=202 Identities=21% Similarity=0.292 Sum_probs=170.0
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.++||+|+||.||++... +++.+|+|++... .......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999654 4778999998642 1223345788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++... ...+++..+..++.|++.+|.|||+.+ ++||||||+|||++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 999999999998542 235788999999999999999999987 999999999999999999999999999754322
Q ss_pred cccccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. ........||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 156 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 156 G-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred C-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 1 11222347899999999885 345788999999999999999999999654
No 113
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=5.7e-32 Score=281.86 Aligned_cols=195 Identities=24% Similarity=0.338 Sum_probs=163.1
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHH-HHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVS-LTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||+||+|.. .+++.||+|++.... .....++..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 4699999999999965 468999999986532 122234455544 56778999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++..+..++.||++||.|||+++ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (323)
T cd05575 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--SKT 152 (323)
T ss_pred CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC--CCc
Confidence 999888743 345888999999999999999999987 999999999999999999999999998753221 122
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 200 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD 200 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence 234578999999999999899999999999999999999999996543
No 114
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.98 E-value=6.6e-32 Score=281.25 Aligned_cols=200 Identities=26% Similarity=0.345 Sum_probs=168.2
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 510 (656)
+|+..+.||+|+||+||++.. .+++.||+|+++... ....+.+..|..++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 366788999999999999954 468899999987532 233455777888888885 577888999999889999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++|+|..++.. ...+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQ---VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 99999999888743 345889999999999999999999987 999999999999999999999999998753221
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
........||+.|+|||++.+..++.++|+|||||++|||++|+.||....
T Consensus 155 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (323)
T cd05615 155 --GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 205 (323)
T ss_pred --CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC
Confidence 112233468999999999998889999999999999999999999997543
No 115
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.98 E-value=4.5e-32 Score=282.90 Aligned_cols=195 Identities=22% Similarity=0.319 Sum_probs=163.3
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHH-HHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVS-LTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||+||++.. .+++.+|+|++.... ......+..|.. +++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999954 568999999986531 222334555554 56778999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--~~~ 152 (325)
T cd05604 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--SDT 152 (325)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC--CCC
Confidence 999877743 345889999999999999999999987 999999999999999999999999998753221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD 200 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence 234578999999999999999999999999999999999999996543
No 116
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=5.7e-32 Score=280.73 Aligned_cols=195 Identities=28% Similarity=0.398 Sum_probs=164.2
Q ss_pred CcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHh-cCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTAR-LQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||+||+|... +++.||||+++... ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999654 57899999987542 2233455667777776 4899999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++.++..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (316)
T cd05619 81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--DAK 152 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCC--CCc
Confidence 999988853 235788999999999999999999987 999999999999999999999999998743221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD 200 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence 234578999999999998889999999999999999999999997544
No 117
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.7e-32 Score=274.70 Aligned_cols=211 Identities=23% Similarity=0.339 Sum_probs=183.9
Q ss_pred hcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChh--hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQ--GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
..-|...+.||+|-|+.|-.++ .-+|..||||++.+.... ....+.+|+..|+.++|||||+++.+...+..+|+|+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 3457777899999999999994 458999999999876443 3446889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc-CCCcEEEEeccCcccccc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRK 589 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~-~~~~~kl~DfGla~~~~~ 589 (656)
|.-.+|+|.+|+..... .+++..+.+++.||+.++.|+|+.| +|||||||+|+.+- .-|-+||+|||++-.+.+
T Consensus 97 ELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999976443 4889999999999999999999999 99999999999875 557899999999987654
Q ss_pred CccccccccccccccccccccccCCCCC-ccchhHHHHHHHHHHHcCCCCCCCCCCcccccccc
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYS-MKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLE 652 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s-~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~ 652 (656)
. ......+|+..|.|||++.+..|+ +++||||||||||.|++|++||+..++.+.+.++-
T Consensus 172 G---~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm 232 (864)
T KOG4717|consen 172 G---KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM 232 (864)
T ss_pred c---chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh
Confidence 3 233456999999999999998886 57999999999999999999999999998887653
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.98 E-value=1.1e-31 Score=274.61 Aligned_cols=201 Identities=27% Similarity=0.394 Sum_probs=171.6
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
+|+..+.||+|+||+||++.. .+++.||+|++.... ......+.+|+.++++++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 477889999999999999965 468899999986532 1223456789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999998877542 2345889999999999999999999987 9999999999999999999999999997653221
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......|+..|+|||.+.+..++.++||||+||++|||++|+.||....
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~ 205 (285)
T cd05605 157 ---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK 205 (285)
T ss_pred ---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc
Confidence 1123468899999999988889999999999999999999999997643
No 119
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.98 E-value=8e-32 Score=294.94 Aligned_cols=208 Identities=24% Similarity=0.336 Sum_probs=174.8
Q ss_pred HhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD----- 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 504 (656)
..++|++.+.||+|+||+||++. ..+++.||||++... .......+.+|+..+..++|+|++++...+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 35689999999999999999995 457899999998654 3344557889999999999999999887765432
Q ss_pred ---ceEEEEEecCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEe
Q 006211 505 ---ENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISD 580 (656)
Q Consensus 505 ---~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~D 580 (656)
..++||||+++|+|..++.... ....+++..+..++.|++.+|.|||+.+ |+||||||+|||++.++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEEe
Confidence 3579999999999999886432 2346889999999999999999999987 99999999999999999999999
Q ss_pred ccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 581 FGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 581 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
||+++.+.............||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~ 249 (496)
T PTZ00283 187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN 249 (496)
T ss_pred cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 999986543322223334578999999999999999999999999999999999999996543
No 120
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.98 E-value=1.7e-32 Score=286.78 Aligned_cols=203 Identities=23% Similarity=0.333 Sum_probs=172.5
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||++.. .+++.||+|+++... .+..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4688899999999999999954 468899999987542 234456888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++... ...+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 999999999988543 235889999999999999999999987 999999999999999999999999999865432
Q ss_pred cccccccccccccccccccccc------CCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVK------KGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 156 KMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred Cce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 211 222346899999999986 4567889999999999999999999996543
No 121
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.98 E-value=1.3e-31 Score=301.09 Aligned_cols=204 Identities=25% Similarity=0.356 Sum_probs=172.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.++||+|+||.||+|.. .+++.||+|+++... ....+++.+|++++++++||||+++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4788999999999999999965 458899999987542 233457899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCc--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 511 EYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
||+++++|..++..... ....++..++.++.|+++||.|||+.+ |+||||||+|||++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 99999999988753211 123566778899999999999999987 9999999999999999999999999
Q ss_pred CccccccCcc----------------ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 583 MAKLFRKDVD----------------EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 583 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+++....... .......+||+.|+|||.+.+..++.++|||||||++|||+||+.||..
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9986521110 0111234689999999999999999999999999999999999999965
No 122
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.98 E-value=8.9e-32 Score=282.40 Aligned_cols=200 Identities=21% Similarity=0.338 Sum_probs=165.2
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ceE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----ENM 507 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 507 (656)
+|++.+.||+|+||.||+|.. .+++.||||++... .......+.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477889999999999999964 56899999998643 2233456889999999999999999999875432 479
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
+||||+. ++|..++.. ...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999995 678777743 335889999999999999999999987 999999999999999999999999999754
Q ss_pred ccCcc-ccccccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 588 RKDVD-EANTGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 588 ~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 32211 111233578999999999865 67899999999999999999999999654
No 123
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.1e-31 Score=285.80 Aligned_cols=193 Identities=21% Similarity=0.278 Sum_probs=165.2
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..+|++.+.||+|+||.||++.. .+++.||+|.... ..+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 35799999999999999999954 5688999996532 3467899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+. ++|..++.. ...+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 165 ~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~-~ 236 (391)
T PHA03212 165 YK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDI-N 236 (391)
T ss_pred CC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccc-c
Confidence 85 677777643 235789999999999999999999987 999999999999999999999999999753221 1
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
........||+.|+|||++.+..++.++|||||||++|||++|+.|+.
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 112223578999999999998899999999999999999999998874
No 124
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=99.98 E-value=4.1e-32 Score=270.30 Aligned_cols=221 Identities=19% Similarity=0.253 Sum_probs=187.6
Q ss_pred CcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCcchHHHHHHHHHhhcCCCCCcEEEEEeecCC
Q 006211 110 NKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDLNSLGILLDEWKASASDQPELTLSMAVRYSP 189 (656)
Q Consensus 110 g~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~~~~~~ll~~lr~~l~~~~~~~ls~a~~~~~ 189 (656)
+.+++.+.++.++.++..++++++++++.++.+|+.|+.||+|..++.|++.|..|+|++|.+| ++.++.+++|+|+..
T Consensus 174 ~~~f~~ela~~lL~net~~~~~i~~ii~~l~~~Gyrgv~iDfE~v~~~DR~~yt~flR~~r~~l-~~~G~~~siAvaakt 252 (423)
T COG3858 174 GANFGGELAQLLLNNETAKNRLINNIITLLDARGYRGVNIDFENVGPGDRELYTDFLRQVRDAL-HSGGYTVSIAVAAKT 252 (423)
T ss_pred ccccchHHHHHHHhcHHHHHHHHHHHHHHHHhcCcccEEechhhCCHHHHHHHHHHHHHHHHHh-ccCCeEEEEEecCCC
Confidence 3444556689999999999999999999999999999999999999999999999999999999 455899999999875
Q ss_pred C-----ccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCceeecccCCC
Q 006211 190 T-----HETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLVLGARASG 264 (656)
Q Consensus 190 ~-----~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG 264 (656)
. .+..+||+..+.++||||.|||||.|.+ .+.+|+.||.. .++..+++.+. -+|++|++||+|+||
T Consensus 253 ~~~~~G~W~~~~dy~a~Gkiad~v~lMtYd~h~~--gG~PG~vA~i~------~vr~~ieya~T-~iP~~Kv~mGip~YG 323 (423)
T COG3858 253 SDLQVGSWHGAYDYVALGKIADFVILMTYDWHYS--GGPPGPVASIG------WVRKVIEYALT-VIPAEKVMMGIPLYG 323 (423)
T ss_pred CCCcCccccchhhhhhhceeeeEEEEEEeccCcC--CCCCCcccCch------hHhhhhhhhhe-ecchHHeEEcccccc
Confidence 3 3556799999999999999999999954 35688888876 67777776666 699999999999999
Q ss_pred CCcCCC----CCc----chHHHHHHHHhcCCCcccccccceeeeeee----cC-cEEEeeCCcchhHHHHhhhhhccccc
Q 006211 265 PGITID----GSM----GYKFIRAFIQNYGYGAAPVYNASYVVNLFT----SG-ATWINFDGVETIKAKISYAKEKNLLG 331 (656)
Q Consensus 265 ~~~~~~----g~~----~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~----~~-~~~i~yd~~~si~~K~~~~~~~glgG 331 (656)
++|+.+ |.. +..+ .......++++..||..++.|+++ ++ .+++||||.+|+++|.+++|+.||.|
T Consensus 324 YDW~~~y~~~g~~~~a~~~~~--~i~ia~~y~A~Iq~D~~~qsp~F~y~D~eg~~h~VWfeD~~s~~~k~~lik~ygl~G 401 (423)
T COG3858 324 YDWTLPYDPLGYLARAISPDE--AIDIANRYNATIQYDATSQSPFFYYVDKEGRYHEVWFEDARSFQTKLDLIKEYGLRG 401 (423)
T ss_pred ccccCCCCCCcceeeecCcch--hhhhhcccCCccCcCccccCceEEEEcCCCceEEEEcCchHHHHHHHHHHHHcCCce
Confidence 999875 222 2223 223445577899999999999854 34 68999999999999999999999999
Q ss_pred ceeeEeccCcc
Q 006211 332 YKAFQLSNDDN 342 (656)
Q Consensus 332 v~~W~l~~Dd~ 342 (656)
|++|.|++.|.
T Consensus 402 Vs~W~Lg~e~p 412 (423)
T COG3858 402 VSYWVLGQEDP 412 (423)
T ss_pred EEEEEecCcch
Confidence 99999999983
No 125
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.98 E-value=8.5e-32 Score=280.36 Aligned_cols=194 Identities=24% Similarity=0.338 Sum_probs=162.0
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHH-HHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVS-LTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|.. .+++.||+|++.... ......+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999965 468899999986532 122334555544 67889999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|...+.. ...+++.....++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (321)
T cd05603 81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--EET 152 (321)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCC--CCc
Confidence 999877743 345788889999999999999999987 999999999999999999999999998753221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC
Confidence 23457899999999999888999999999999999999999999654
No 126
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.98 E-value=9.5e-32 Score=280.43 Aligned_cols=195 Identities=23% Similarity=0.314 Sum_probs=161.7
Q ss_pred CcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHH-HHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEV-SLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||++... +++.+|+|++.... ......+..|. .+++.++||||+++++.+...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999654 57889999986532 12223344444 456778999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+.+.....++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--~~~ 152 (325)
T cd05602 81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--NGT 152 (325)
T ss_pred CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccC--CCC
Confidence 999888853 334778888899999999999999987 999999999999999999999999999753221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 200 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 200 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC
Confidence 334578999999999999999999999999999999999999996543
No 127
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.98 E-value=1.1e-31 Score=278.72 Aligned_cols=195 Identities=27% Similarity=0.398 Sum_probs=164.3
Q ss_pred CcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999654 68899999987532 22334566777777754 899999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.++|+|||+++..... ...
T Consensus 81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (316)
T cd05620 81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--DNR 152 (316)
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC--CCc
Confidence 999888743 345788999999999999999999987 999999999999999999999999998743211 122
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~ 200 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD 200 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 234578999999999999999999999999999999999999996543
No 128
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-32 Score=273.13 Aligned_cols=203 Identities=26% Similarity=0.392 Sum_probs=175.9
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
+.|+.-++||+|+||.|+-++. .+|+.+|.|.+.+... +...-.++|-.+|.+++.+.||.+-..+++.+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5567778999999999999954 5799999998865432 22334678999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
..|.||+|.-++.+... ..++++.++.++.+|+.||++||... ||.||+||+|||+|+.|+++|+|.|+|..+...
T Consensus 265 tlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999877765433 56999999999999999999999987 999999999999999999999999999876543
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
. .....+||.+|||||++.+..|+...|.|||||++|||+-|+.||..+..
T Consensus 341 ~---~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 341 K---PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred C---ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 2 22234899999999999999999999999999999999999999976543
No 129
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.4e-33 Score=264.17 Aligned_cols=210 Identities=23% Similarity=0.315 Sum_probs=180.7
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
-++|+.+++||+|.||.|-.++- .+++.+|+|+++++- ..+...-+.|-++|...+||.+..+-..|+..+.+|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 46788899999999999999954 468999999998762 33445567889999999999999999899999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||..||.|.-.|. +...+++...+.+-..|+.||.|||+.+ ||.||||.+|.|+|.+|++||+|||+++.-..
T Consensus 247 MeyanGGeLf~HLs---rer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLS---RERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehh---hhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999976663 4556888889999999999999999987 99999999999999999999999999985332
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCccccccc
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFL 651 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~ 651 (656)
....+...||||.|+|||++....|...+|.|.+||++|||++|+.||...+.+....++
T Consensus 321 --~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLI 380 (516)
T KOG0690|consen 321 --YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELI 380 (516)
T ss_pred --ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHH
Confidence 234456689999999999999999999999999999999999999999765554444433
No 130
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97 E-value=2.4e-31 Score=283.49 Aligned_cols=207 Identities=28% Similarity=0.407 Sum_probs=171.5
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCC
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERD 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 504 (656)
..++|++.+.||+|+||.||+|... .+..||||+++... ....+.+.+|++++.++. ||||++++++|....
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3567889999999999999999642 23479999997543 333467899999999996 999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCc---------------------------------------------------------
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIR--------------------------------------------------------- 527 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 527 (656)
..++||||+++|+|..++.....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999888753210
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 528 ------------------------------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 528 ------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
...+++..+..++.|+++||.|||+.+ ++||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 124778888999999999999999987 99999999999999
Q ss_pred CCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 572 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 999999999999986543322222233456778999999988889999999999999999997 88888653
No 131
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=2.6e-31 Score=272.62 Aligned_cols=201 Identities=25% Similarity=0.412 Sum_probs=164.2
Q ss_pred cCCCCCCcccccCceEEEEEEe--CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhc---CCCceeeEEEEEee-----
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL--PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARL---QHVNLLRVLGYCTE----- 502 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~----- 502 (656)
++|++.+.||+|+||.||+|.. .+++.||+|+++... ......+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 4688999999999999999965 246789999886542 22233456677777665 69999999998852
Q ss_pred CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 503 RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 503 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
....++|+||++ ++|..++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence 346889999996 58887775432 234889999999999999999999987 9999999999999999999999999
Q ss_pred CccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
+++..... .......|++.|+|||.+....++.++|||||||++|||++|++||....
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 213 (290)
T cd07862 156 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 213 (290)
T ss_pred ceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence 99765432 22234568999999999988889999999999999999999999997543
No 132
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=5e-32 Score=281.70 Aligned_cols=195 Identities=26% Similarity=0.336 Sum_probs=167.4
Q ss_pred CcccccCceEEEEEEe----CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 441 NKLGEGGFGPVYKGNL----PRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
+.||+|+||.||++.. .+++.+|+|++..... .....+..|++++++++||||+++++++......++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999853 3578999999875422 233456789999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++.. ...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||+++...... .
T Consensus 82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~ 153 (318)
T cd05582 82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K 153 (318)
T ss_pred CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--C
Confidence 9999888743 345899999999999999999999987 9999999999999999999999999997543221 1
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......|++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 202 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD 202 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC
Confidence 2233578999999999988888999999999999999999999997544
No 133
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=292.83 Aligned_cols=209 Identities=25% Similarity=0.344 Sum_probs=173.5
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCC-CEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEE-EEee------CC
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRG-QEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLG-YCTE------RD 504 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~-~~~~------~~ 504 (656)
..++++.+.|.+|+|+.||.|....+ ..+|+|++-..++...+.+.+|+++|+.|+ |+|||.+++ .... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 34567789999999999999977665 999999988778888899999999999997 999999999 3221 13
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
+.+|.||||++|.|-+++..+.... +++.++++|+.++++|+.+||.+. ++|||||||-+||||..+++.||||||.+
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccc
Confidence 5689999999999999987654444 999999999999999999999986 67999999999999999999999999988
Q ss_pred cccccCccccc-c------ccccccccccccccc---cCCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 585 KLFRKDVDEAN-T------GRIVGTYGYVPPEYV---KKGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 585 ~~~~~~~~~~~-~------~~~~gt~~y~aPE~~---~~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
.-......... . -...-|+.|.|||++ .+..++.|+|||+|||+||-|+....||+..+.
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~ 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc
Confidence 64322211100 0 011347899999987 577899999999999999999999999987643
No 134
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=1.5e-31 Score=277.87 Aligned_cols=203 Identities=28% Similarity=0.449 Sum_probs=168.8
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCC----EEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQ----EFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
.+|+..+.||+|+||.||+|... ++. .||+|.++... ....+++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999643 333 48999987543 34456788999999999999999999998764 5689
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
++||+++|+|.+++... ...+++.....++.|+++||+|||+.+ ++||||||+|||++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 99999999999988643 234788899999999999999999987 9999999999999999999999999998765
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.............+..|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~ 216 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 216 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 4322222222234678999999999999999999999999999998 999986543
No 135
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=1.8e-31 Score=270.28 Aligned_cols=204 Identities=25% Similarity=0.390 Sum_probs=170.1
Q ss_pred hcCCCCCCcccccCceEEEEEEeC----CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP----RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
.++|++.+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+..+.+++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888899999999999999542 35689999987653 2334578899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
||||+++|+|..++... ...+++..++.++.|++.||+|||+.+ ++||||||+|||++.++.++++|||.+....
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 99999999999988542 235889999999999999999999987 9999999999999999999999999876432
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
... ........++..|+|||.+.+..++.++|||||||++||+++ |+.||....
T Consensus 159 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~ 213 (266)
T cd05064 159 SEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred ccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC
Confidence 211 111112234578999999998999999999999999999875 999986543
No 136
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=2.1e-31 Score=276.81 Aligned_cols=195 Identities=28% Similarity=0.371 Sum_probs=165.7
Q ss_pred CcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||++... +++.||+|+++... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999654 57899999987542 23345667888888887 699999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++..... ...
T Consensus 81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~ 152 (318)
T cd05570 81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--GVT 152 (318)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcC--CCc
Confidence 999887743 235899999999999999999999987 999999999999999999999999998643221 112
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....+|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 233468999999999999999999999999999999999999996543
No 137
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=2e-33 Score=265.72 Aligned_cols=196 Identities=27% Similarity=0.461 Sum_probs=175.8
Q ss_pred CCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 437 FSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
|.++++||+|+||.||++ ....|+.+|||.+.... ..+++..|+.++.+.+.|++|+++|.+.....+++|||||--
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 567789999999999999 55679999999887653 457889999999999999999999999888999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+..+.++. ++.++++++...++...++||+|||.+. -||||||+.|||++.+|..||+|||.+..+... -..
T Consensus 113 GSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--MAK 185 (502)
T KOG0574|consen 113 GSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--MAK 185 (502)
T ss_pred CcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh--HHh
Confidence 999999854 4567999999999999999999999987 799999999999999999999999999876532 233
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
...+.||+.|||||++..-.|+.++||||||++..||.-|++|+..
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD 231 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD 231 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc
Confidence 4567899999999999999999999999999999999999999854
No 138
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=3.8e-31 Score=270.32 Aligned_cols=206 Identities=31% Similarity=0.521 Sum_probs=171.9
Q ss_pred cCCCCCCcccccCceEEEEEEeCC------CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR------GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
++|++.+.||+|+||.||+|.... ...+++|.+.... ......+.+|+.++.+++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357888999999999999996532 2579999987543 233457899999999999999999999999989999
Q ss_pred EEEEecCCCChhhhhhCCCc-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC
Q 006211 508 LIYEYLPNKSLDLYLFDPIR-------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL 574 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~ 574 (656)
+++||+++++|..++..... ...+++.+.+.++.|++.+|.|||+.+ ++|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999988854211 145788999999999999999999987 99999999999999999
Q ss_pred cEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 575 NPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 575 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.++|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999976543222222233456788999999988889999999999999999998 999986543
No 139
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=2.7e-31 Score=270.94 Aligned_cols=207 Identities=29% Similarity=0.477 Sum_probs=173.8
Q ss_pred cCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
++|.+.+.||+|+||.||+|... ++..||||.++..... ..+.+.+|+++++.++|||++++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 45778899999999999999653 3478999998765443 4568899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC-----------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcE
Q 006211 508 LIYEYLPNKSLDLYLFDPI-----------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~ 576 (656)
++|||+++++|..++.... ....+++.....++.|++.++.+||+.+ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999885421 1235788999999999999999999987 9999999999999999999
Q ss_pred EEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCC
Q 006211 577 KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGT 644 (656)
Q Consensus 577 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~ 644 (656)
+|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~ 230 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN 230 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999975433222122223345678999999999999999999999999999998 9999865443
No 140
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=287.57 Aligned_cols=206 Identities=31% Similarity=0.465 Sum_probs=175.8
Q ss_pred CCCcccccCceEEEEEE-eCCCC----EEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 439 SANKLGEGGFGPVYKGN-LPRGQ----EFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~-~~~~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..++||+|+||+||+|- .+.++ +||||++... ..+...++++|.-+|.+++|||+++++++|..+. ..||++|
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~ 778 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL 778 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence 46899999999999994 34444 6899998665 3445678999999999999999999999998766 7899999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
++.|+|.++++. .+..+..+..+.+..||++||.|||++. ++||||..+|||+.+-..+||.|||+++....+..
T Consensus 779 mP~G~LlDyvr~--hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 779 MPLGCLLDYVRE--HRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred cccchHHHHHHH--hhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 999999999976 4456888999999999999999999886 99999999999999999999999999998877665
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCCcccccc
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGTSENLNF 650 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~ 650 (656)
........-.+.|||-|.+....|+.++|||||||++||++| |.+|+.....++..++
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dl 912 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDL 912 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHH
Confidence 555555555789999999999999999999999999999997 6778876655544433
No 141
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=275.84 Aligned_cols=209 Identities=26% Similarity=0.446 Sum_probs=176.0
Q ss_pred HHHhcCCCCCCcccccCceEEEEEEe--C-CCC--EEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 006211 431 KAATNNFSSANKLGEGGFGPVYKGNL--P-RGQ--EFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD 504 (656)
Q Consensus 431 ~~~~~~y~~~~~iG~G~~g~V~~~~~--~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 504 (656)
+...+.....+.||+|.||.||+|.. . .|+ .||||..+.. ..+..+.|++|..+|+.++||||++++|+|.+ .
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 33444555678999999999999943 1 333 6899998874 45567789999999999999999999999985 5
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..+||||.++-|.|..||.. ++..++......++.||+.+|.|||+.. +|||||..+|||+....-+||+|||++
T Consensus 464 P~WivmEL~~~GELr~yLq~--nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQ--NKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred ceeEEEecccchhHHHHHHh--ccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchh
Confidence 78999999999999999964 4556888999999999999999999987 999999999999999999999999999
Q ss_pred cccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCCCcc
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYGTSE 646 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~~~~ 646 (656)
+.+..+... ..+...-+..|||||.+.-..++.+||||.|||++||+++ |.+||..-.+.+
T Consensus 539 R~~ed~~yY-kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD 600 (974)
T KOG4257|consen 539 RYLEDDAYY-KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD 600 (974)
T ss_pred hhccccchh-hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc
Confidence 987654332 2234456789999999999999999999999999999765 889997765544
No 142
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-32 Score=283.82 Aligned_cols=199 Identities=27% Similarity=0.442 Sum_probs=174.3
Q ss_pred cccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChhh
Q 006211 442 KLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDL 520 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 520 (656)
+||+|.||+||.|+. .+...+|||.+.....+..+.+.+|+.+-++++|.|||+++|.|.+.+..-|.||.++||+|..
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 599999999999965 4466899999988777777889999999999999999999999999999999999999999999
Q ss_pred hhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc-CCCcEEEEeccCccccccCccccccccc
Q 006211 521 YLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD-NELNPKISDFGMAKLFRKDVDEANTGRI 599 (656)
Q Consensus 521 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~ 599 (656)
++...-..-.-.+.+.-.+.+||++||.|||+++ |||||||-.|+||+ -.|.+||+|||-++.+.. -.+.+.+.
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TETF 736 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTETF 736 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhcc--CCcccccc
Confidence 9976544434478888999999999999999998 99999999999997 468899999999987653 34556678
Q ss_pred cccccccccccccCCC--CCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 600 VGTYGYVPPEYVKKGI--YSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 600 ~gt~~y~aPE~~~~~~--~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
.||..|||||++..++ |...+|||||||++.||.||++||-..+.+
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp 784 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP 784 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh
Confidence 8999999999997654 788999999999999999999999766543
No 143
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=9.2e-31 Score=266.66 Aligned_cols=193 Identities=22% Similarity=0.396 Sum_probs=163.6
Q ss_pred ccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||+|+||.||++.. .+++.+|+|++..... .....+..|++++++++||||+++.+.+......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999965 4589999999864321 1223456799999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
..++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~ 153 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ 153 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence 88775432 334788999999999999999999987 9999999999999999999999999997654321 1123
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~ 197 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH 197 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence 46889999999998888999999999999999999999999653
No 144
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=6.7e-31 Score=269.27 Aligned_cols=206 Identities=28% Similarity=0.467 Sum_probs=173.4
Q ss_pred hcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
.++|.+.+.||+|+||.||++.. .++..+|+|.+..........+.+|+.++.+++|||++++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 35688889999999999999963 234568999988766566678899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhCCC----------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEE
Q 006211 508 LIYEYLPNKSLDLYLFDPI----------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPK 577 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~k 577 (656)
+++||+++++|..++.... ....+++..+..++.|++.+|.|||+.+ ++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999998885321 2234899999999999999999999987 99999999999999999999
Q ss_pred EEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 578 ISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 578 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
|+|||+++...............++..|+|||.+.+..++.++|+|||||++|||++ |+.||...
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~ 226 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 226 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999976543222122223345678999999988889999999999999999998 88888544
No 145
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=4.3e-31 Score=270.00 Aligned_cols=205 Identities=31% Similarity=0.481 Sum_probs=170.5
Q ss_pred cCCCCCCcccccCceEEEEEEe-----CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-----PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
+.|++.+.||+|+||.||+|.. ..+..+++|.+.... .+....+.+|+.++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3567889999999999999963 346789999987543 3344678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCC--------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC
Q 006211 509 IYEYLPNKSLDLYLFDPI--------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL 574 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~--------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~ 574 (656)
+|||+++++|..++.... ....+++.+...++.+++.+|.|||+.+ ++||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999998874321 1234788899999999999999999987 99999999999999999
Q ss_pred cEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 575 NPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 575 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~ 230 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF 230 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999976543222222223345678999999988889999999999999999999 88888543
No 146
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=4.3e-31 Score=269.13 Aligned_cols=208 Identities=25% Similarity=0.448 Sum_probs=171.1
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 505 (656)
..++|++.+.||+|+||.||+|... .+..||+|.+.... .....++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999998542 24679999886532 2344568899999999999999999999999899
Q ss_pred eEEEEEecCCCChhhhhhCCCc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEE
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIR-------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl 578 (656)
.++||||+++++|..++..... ...+++..+..++.|++++|.|||+.+ ++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 9999999999999998854221 124678889999999999999999987 999999999999999999999
Q ss_pred EeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 579 SDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 579 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~ 226 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS 226 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999975543222111222345678999999988889999999999999999999 688886544
No 147
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.97 E-value=2.7e-31 Score=267.76 Aligned_cols=201 Identities=36% Similarity=0.605 Sum_probs=165.8
Q ss_pred CCCcccccCceEEEEEEeC-----CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 439 SANKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..+.||.|.||.||+|.+. .+..|+||.++... .+..+.+.+|++.+++++||||+++++++......++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3478999999999999765 25689999996643 34467899999999999999999999999988889999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++|+|.+++... ....+++..+..++.|+++||.|||+.+ ++|+||+++||+++.++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc-cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 9999999998654 2346899999999999999999999987 99999999999999999999999999987632222
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
............|+|||.+....++.++||||||+++|||++ |+.|+....
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~ 210 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD 210 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 222223356778999999998889999999999999999999 678886543
No 148
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=1e-30 Score=267.49 Aligned_cols=199 Identities=26% Similarity=0.390 Sum_probs=169.7
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
|+..+.||+|+||.||++.. .+++.+|+|.+.... ....+.+.+|+.++++++|+|++++.+.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 66778999999999999954 468899999886542 22234567899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 9999998887432 2235889999999999999999999987 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......|+..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~ 204 (285)
T cd05630 157 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 204 (285)
T ss_pred --cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 112346899999999999888999999999999999999999999754
No 149
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=6.7e-31 Score=265.14 Aligned_cols=202 Identities=29% Similarity=0.467 Sum_probs=172.9
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.++||+|++|.||+|...++..||+|.+.... ...+.+.+|+.++++++|+||+++++.+......++++||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 5688899999999999999988788899999886543 335678999999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++... ....+++..+..++.+++++|.|||+.+ ++||||||+||++++++.++|+|||++........ .
T Consensus 85 ~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~ 159 (261)
T cd05072 85 KGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-T 159 (261)
T ss_pred CCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-e
Confidence 99999988543 2345788899999999999999999987 99999999999999999999999999986543211 1
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
......++..|+|||.+....++.++|||||||++|||+| |+.||...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 208 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM 208 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC
Confidence 1122345678999999988889999999999999999998 99998654
No 150
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97 E-value=7.5e-31 Score=264.02 Aligned_cols=202 Identities=29% Similarity=0.442 Sum_probs=171.0
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.+.||+|+||.||++...++..+|+|.+.... ...+.+.+|+.++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 3477789999999999999988788899999886442 234578899999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+|+|..++... ...+++..+..++.+++.+|.|||+.+ ++||||+|+||+++.++.+||+|||+++........
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05114 83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT- 156 (256)
T ss_pred CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee-
Confidence 99999888542 235789999999999999999999987 999999999999999999999999999765322111
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
......++..|+|||.+....++.++|+||||+++|||++ |+.||....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~ 206 (256)
T cd05114 157 SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS 206 (256)
T ss_pred ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 1112234568999999988889999999999999999999 888886543
No 151
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=4.4e-31 Score=280.74 Aligned_cols=200 Identities=22% Similarity=0.354 Sum_probs=166.5
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ceE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----ENM 507 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 507 (656)
+|++.+.||+|+||.||++.. .+++.||||++... .....+++.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999964 57899999998653 2234457889999999999999999999998766 789
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
+|+||+. ++|...+.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999996 466666532 345889999999999999999999987 999999999999999999999999999765
Q ss_pred ccCccccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 588 RKDVDEANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 588 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
...... ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 154 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 154 EPDESK-HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred ccCccc-cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 432211 12233578899999988764 47899999999999999999999997544
No 152
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-32 Score=279.81 Aligned_cols=195 Identities=30% Similarity=0.451 Sum_probs=167.9
Q ss_pred CCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.|+.++.||.|+||.||.++ ..+.+.||||.++-+. .+...+++.|+.+|++++|||++.+.||+......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 35667889999999999995 4567899999987653 3446689999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
||- |+-.+++. ..+.++.+.++..|+.+.++||.|||+.+ .||||||+.|||+++.|.|||+|||.+....+
T Consensus 107 YCl-GSAsDlle--VhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-- 178 (948)
T KOG0577|consen 107 YCL-GSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP-- 178 (948)
T ss_pred HHh-ccHHHHHH--HHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc--
Confidence 995 45555552 23456888999999999999999999998 89999999999999999999999999976533
Q ss_pred ccccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...++|||.|||||++. .+.|+-++||||||++..||.-.++|....
T Consensus 179 ----AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM 228 (948)
T KOG0577|consen 179 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 228 (948)
T ss_pred ----hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc
Confidence 33568999999999874 578999999999999999999999997544
No 153
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=8.2e-31 Score=274.39 Aligned_cols=204 Identities=30% Similarity=0.454 Sum_probs=168.4
Q ss_pred cCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC-Cc
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER-DE 505 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~~ 505 (656)
++|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+.++.++ +||||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 4688999999999999999943 235789999987543 23345678899999999 899999999988654 56
Q ss_pred eEEEEEecCCCChhhhhhCCCc----------------------------------------------------------
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIR---------------------------------------------------------- 527 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~---------------------------------------------------------- 527 (656)
.++++||+++++|..++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999988743211
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccccccccccccc
Q 006211 528 RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVP 607 (656)
Q Consensus 528 ~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~a 607 (656)
...+++..+..++.|++.+|.|||+++ |+||||||+|||++.++.++|+|||+++.+.............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 125789999999999999999999987 99999999999999999999999999986543322222333455678999
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHc-CCCCCCC
Q 006211 608 PEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARY 641 (656)
Q Consensus 608 PE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~ 641 (656)
||.+.+..++.++|||||||++|||++ |+.||..
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999999998 9999864
No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=3.9e-31 Score=286.08 Aligned_cols=199 Identities=21% Similarity=0.333 Sum_probs=160.4
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--------C
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--------D 504 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~ 504 (656)
..+|++.+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++||||+++.+++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 45799999999999999999965 468899999885432 2235799999999999999998876432 2
Q ss_pred ceEEEEEecCCCChhhhhhC-CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEecc
Q 006211 505 ENMLIYEYLPNKSLDLYLFD-PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDFG 582 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfG 582 (656)
..++||||+++ ++..++.. ......+++..+..++.|+++||.|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 36689999985 55555432 123446889999999999999999999987 99999999999999665 69999999
Q ss_pred CccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
+++.+.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|++||....
T Consensus 217 la~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 275 (440)
T PTZ00036 217 SAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS 275 (440)
T ss_pred cchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 998654322 1223467899999998765 468999999999999999999999997543
No 155
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=8.1e-31 Score=277.36 Aligned_cols=198 Identities=24% Similarity=0.312 Sum_probs=165.7
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD----- 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 504 (656)
..++|++.+.||+|+||.||++.. .++..||+|++... .......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999954 46889999998653 2233456789999999999999999999886543
Q ss_pred -ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 505 -ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 505 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
..++||||++++ |...+. ..+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~~-l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDAN-LCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCcC-HHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence 468999999764 444442 23778889999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
++..... .......+|+.|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 170 a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 170 ARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred ccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9754322 1222346889999999999989999999999999999999999999754
No 156
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=1e-30 Score=268.38 Aligned_cols=206 Identities=27% Similarity=0.458 Sum_probs=173.5
Q ss_pred cCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
.+|.+.+.||+|+||.||++.. .++..+++|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 3577789999999999999953 2345689999877666556778999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCC-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCc
Q 006211 509 IYEYLPNKSLDLYLFDPI-------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN 575 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~ 575 (656)
||||+++++|.+++.... ....+++..++.++.|++.++.|||+.+ ++||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999985421 1234789999999999999999999987 999999999999999999
Q ss_pred EEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 576 PKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 576 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
++|+|||++................++..|+|||.+....++.++|||||||++|||+| |+.||....
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 230 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 230 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99999999976543222222233456788999999988889999999999999999999 999985543
No 157
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=2.1e-30 Score=264.26 Aligned_cols=193 Identities=24% Similarity=0.382 Sum_probs=168.0
Q ss_pred cCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|+..+.||+|+||.||+|. ..+++.+|+|++... .....+++.+|++++.+++|||++++++.+...+..++|+||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 357788999999999999995 457889999998654 233445788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..+. .+++.....++.|++.+|.|||+.+ ++|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-- 148 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-- 148 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc--
Confidence 9999996542 3678888999999999999999987 999999999999999999999999999765322
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
......++..|+|||.+.+..++.++|+|||||++|||++|+.||..
T Consensus 149 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 149 --IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred --cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 12234688899999999988899999999999999999999999964
No 158
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=7.2e-31 Score=271.91 Aligned_cols=202 Identities=25% Similarity=0.393 Sum_probs=167.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|...+.||+|+||.||+|... +++.+|+|+++.... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46888999999999999999654 678899999875432 2234577899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++ +|..++... ...+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 975 777666432 234788899999999999999999987 9999999999999999999999999997543221
Q ss_pred ccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
.......+++.|+|||.+.+ ..++.++|||||||++|||+||+.||...+.
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 210 (309)
T cd07872 159 -KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV 210 (309)
T ss_pred -cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 11223467889999998765 4578999999999999999999999975543
No 159
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=1.6e-30 Score=265.96 Aligned_cols=200 Identities=25% Similarity=0.377 Sum_probs=170.2
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
|+..+.||+|+||+||++.. .+++.+|+|.+.... ....+.+.+|++++++++|+|++++.+.+..++..++++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56778999999999999955 468899999986542 22234577899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ....+++..+..++.|++.+|.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 9999998877542 2235899999999999999999999987 9999999999999999999999999997543221
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......|+..|+|||.+.+..++.++|+|||||++|||++|+.||....
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~ 205 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468899999999988889999999999999999999999997543
No 160
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.7e-30 Score=263.23 Aligned_cols=201 Identities=23% Similarity=0.383 Sum_probs=171.6
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..+|++.+.||+|+||.||+|.. .+++.+|+|++..........+.+|+.++.+++||||+++++.+......++|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35688999999999999999965 56889999998765544556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++.. ...+++..+..++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06646 88 CGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI- 160 (267)
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence 999999988743 335789999999999999999999987 9999999999999999999999999998654321
Q ss_pred cccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......++..|+|||.+. ...++.++|+|||||++|||++|+.|+...
T Consensus 161 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 161 -AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 1122346788999999874 345788999999999999999999998543
No 161
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.97 E-value=1.6e-30 Score=262.47 Aligned_cols=204 Identities=27% Similarity=0.442 Sum_probs=173.0
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.++|++.+.||+|++|.||+|...+++.||+|.++... ...+.+.+|+.++++++|||++++++++...+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 35688889999999999999987777889999987643 23466889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|.+++.... ...+++.....++.+++.++.+||+.+ ++||||||+||++++++.++|+|||+++........
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05068 84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE 159 (261)
T ss_pred cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence 9999999985432 345889999999999999999999987 999999999999999999999999999876422111
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.......+..|+|||.+.+..++.++|+||||+++|||++ |+.||....
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 209 (261)
T cd05068 160 -AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT 209 (261)
T ss_pred -ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 1111223457999999988889999999999999999999 998886543
No 162
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=1.8e-30 Score=262.79 Aligned_cols=204 Identities=29% Similarity=0.467 Sum_probs=171.9
Q ss_pred cCCCCCCcccccCceEEEEEEeCC----CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR----GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
++|++.+.||+|+||.||+|.... ...||||.++... .....++.+|+.++.+++||||+++++.+...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 468889999999999999996632 4579999987653 33445788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++++|..++.... ..+++..+..++.|++.++.|||+++ ++|+||||+||++++++.++|+|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999985432 35889999999999999999999987 99999999999999999999999999987642
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
...........++..|+|||.+....++.++||||||+++|||++ |..||....
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~ 213 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS 213 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC
Confidence 222222222344678999999988889999999999999999998 998885433
No 163
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=1.1e-30 Score=262.83 Aligned_cols=202 Identities=28% Similarity=0.447 Sum_probs=170.9
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.+.||+|+||.||.+...++..+|+|.+.... ...+.+.+|+.++++++||||+++++++......+++|||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3467889999999999999987777789999887543 234678999999999999999999999998889999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++.... ..+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||+++........
T Consensus 83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05113 83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT- 156 (256)
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCcee-
Confidence 999999885432 25889999999999999999999987 999999999999999999999999998765432211
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
......++..|+|||.+....++.++||||||+++|||++ |+.||....
T Consensus 157 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 206 (256)
T cd05113 157 SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFN 206 (256)
T ss_pred ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCC
Confidence 1112234567999999988889999999999999999999 999986544
No 164
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.8e-31 Score=280.43 Aligned_cols=199 Identities=21% Similarity=0.284 Sum_probs=169.4
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC---CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP---RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
...+|++.+.||+|+||.||++... .+..|++|.+.... ...+|++++++++||||+++++++......+++
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-----TPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 3457999999999999999999542 35789999886532 346799999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||++. ++|..++. ....+++..++.++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.....
T Consensus 165 ~e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 165 MPKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred ehhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 99986 57777762 3346899999999999999999999987 99999999999999999999999999976544
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
...........||+.|+|||++....++.++|||||||++|||++|+.||....
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 332223334578999999999998899999999999999999999999996544
No 165
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=1.4e-30 Score=265.71 Aligned_cols=203 Identities=28% Similarity=0.403 Sum_probs=166.9
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCC----EEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQ----EFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
++|+..+.||+|+||+||+|... +++ .+++|.+..... ....++..|+..+.+++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 46778899999999999999653 344 478888754432 33456778888999999999999999875 455788
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
++||+++|+|..++... ...+++.....++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 99999999999998542 335889999999999999999999987 9999999999999999999999999998654
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
............++..|+|||.+....++.++|||||||++|||++ |+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 216 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR 216 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3322222233456778999999988889999999999999999998 999986543
No 166
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=1.7e-30 Score=265.20 Aligned_cols=205 Identities=28% Similarity=0.460 Sum_probs=172.1
Q ss_pred cCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
.+++..++||+|+||.||++.. .++..+++|.+..........+.+|+++++.++|+||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4677889999999999999953 2356899999887666666789999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCc------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcE
Q 006211 509 IYEYLPNKSLDLYLFDPIR------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~ 576 (656)
++||+++++|..++..... ...+++..+..++.|++.|+.|||+.+ ++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999988854221 134788999999999999999999987 9999999999999999999
Q ss_pred EEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 577 KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 577 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
+|+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 228 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL 228 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC
Confidence 9999999975533221111222345678999999988889999999999999999998 88888543
No 167
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=248.02 Aligned_cols=208 Identities=24% Similarity=0.313 Sum_probs=173.9
Q ss_pred HhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ce
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----EN 506 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 506 (656)
..++|++.+.||+|+|+-|+.++ ..+++.+|+|++.....++.+..++|++..++++|||+++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999994 6678999999998877777888999999999999999999998765433 48
Q ss_pred EEEEEecCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 507 MLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
|++++|...|+|.+.+.... .+..+++.+.+.++.++++||++||+.. +++.||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 99999999999988886543 3447999999999999999999999986 479999999999999999999999999987
Q ss_pred ccccCcccc-------cccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 586 LFRKDVDEA-------NTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 586 ~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
...-..... ......-|..|.|||.+. +...+.++|||||||+||+|+.|..||+.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~ 243 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER 243 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH
Confidence 532111100 011123478899999885 34578999999999999999999999965
No 168
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=3.1e-30 Score=260.46 Aligned_cols=201 Identities=26% Similarity=0.419 Sum_probs=170.8
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-----hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-----TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
++|+..+.||+|++|.||++.. .+++.+++|.+.... ....+.+.+|++++++++||||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999954 468899999886432 1234568889999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
++||+++++|..++.. ...+++.....++.+++.+|.|||+.+ ++||||+|+||++++++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 9999999999888743 235788999999999999999999987 9999999999999999999999999997653
Q ss_pred cCccccc-cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 589 KDVDEAN-TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 589 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
....... .....++..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 3211111 1234577899999999988899999999999999999999999854
No 169
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=7.5e-31 Score=268.17 Aligned_cols=205 Identities=30% Similarity=0.467 Sum_probs=169.3
Q ss_pred CCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
+|++.+.||+|+||.||+|... .+..||+|+++.... ...+.+.+|+.++..++||||+++++++......++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3566789999999999999643 246899999976543 234568899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCC-------------CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCc
Q 006211 509 IYEYLPNKSLDLYLFDP-------------IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN 575 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~ 575 (656)
++||+++++|..++... ..+..+++..+..++.|++.||.|||+.+ ++||||||.||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 99999999999887421 11234788889999999999999999987 999999999999999999
Q ss_pred EEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 576 PKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 576 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
+||+|||+++...............+++.|+|||.+....++.++|||||||++|||++ |..||....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 231 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 231 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999876543222222233455778999999988889999999999999999998 777876543
No 170
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.8e-30 Score=267.08 Aligned_cols=200 Identities=26% Similarity=0.417 Sum_probs=173.9
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.+|+..+.||+|++|.||++.. .+++.+++|.+........+.+.+|+.+++.++|||++++++.+......++|+||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 5788889999999999999964 568899999987765555677889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.. ..+++.++..++.|++.+|.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 100 ~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-- 170 (296)
T cd06654 100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (296)
T ss_pred CCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc--
Confidence 99999988743 34788999999999999999999987 9999999999999999999999999987643321
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......+++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223467889999999988888999999999999999999999996543
No 171
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=7.2e-31 Score=264.89 Aligned_cols=204 Identities=31% Similarity=0.513 Sum_probs=176.8
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
..+|++.++||.|+||.||+|...++..+++|.+..........+..|+.+++.++|||++++++++......++||||+
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM 84 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence 45688899999999999999988779999999998776655677899999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|.+++.... ...+++.....++.++++|+.|||+.+ ++|+||+|+||++++++.+||+|||.+.........
T Consensus 85 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 85 EKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred ccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999986532 345889999999999999999999987 999999999999999999999999999765432111
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.....++..|+|||.+....++.++|+||||+++|+|++ |+.||....
T Consensus 161 --~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~ 209 (261)
T cd05148 161 --SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN 209 (261)
T ss_pred --ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC
Confidence 112345678999999988889999999999999999998 888886543
No 172
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=2.5e-31 Score=277.95 Aligned_cols=193 Identities=24% Similarity=0.323 Sum_probs=159.7
Q ss_pred ccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhc---CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 443 LGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARL---QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 443 iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
||+|+||+||+|.. .+++.||||++.... ......+..|..++.+. +||||+++++.+......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999965 468999999986432 12233445566666655 699999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|..++.. ...+++..+..++.||++||.|||+.+ |+||||||+|||++.++.++|+|||+++...... ..
T Consensus 81 g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~ 152 (330)
T cd05586 81 GELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KT 152 (330)
T ss_pred ChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CC
Confidence 999888743 345889999999999999999999987 9999999999999999999999999987532211 12
Q ss_pred cccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....||+.|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~ 201 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED 201 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC
Confidence 2345789999999988654 47899999999999999999999996543
No 173
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=275.27 Aligned_cols=205 Identities=28% Similarity=0.442 Sum_probs=176.8
Q ss_pred HhcCCCCCCcccccCceEEEEEEeCC-CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
...+..+.++||-|.||.||.|.++. ...||||.++... -..++|+.|..+|+.++|||+|+++|+|..+...|||+|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 34456678999999999999998765 6689999997653 456889999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
||..|+|.+||.+..+ ..++.-.++.++.||..||+||...+ +|||||..+|+|+.++..+|++|||+++++..+.
T Consensus 344 fM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred cccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 9999999999977543 45777888999999999999999998 9999999999999999999999999999987654
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.... ....-++.|.|||.+....++.|+|||+|||+|||+.| |-.|+.+-+
T Consensus 420 YTAH-AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid 471 (1157)
T KOG4278|consen 420 YTAH-AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID 471 (1157)
T ss_pred eecc-cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc
Confidence 3322 22344678999999999999999999999999999986 666765433
No 174
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=2.7e-30 Score=267.45 Aligned_cols=199 Identities=25% Similarity=0.332 Sum_probs=171.0
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|++.+.||+|+||.||++.. .++..+|+|.+... ......++.+|++++.+++||||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688899999999999999954 46788999988754 233345688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ..+++..+..++.|++++|.|||+.+ +++||||||+|||+++++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 9999999998542 45788999999999999999999843 3999999999999999999999999998754321
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......++..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~ 201 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP 201 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCc
Confidence 122346788999999998888999999999999999999999998643
No 175
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=3.9e-30 Score=264.14 Aligned_cols=202 Identities=26% Similarity=0.419 Sum_probs=172.6
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
.+.|++.++||+|+||.||+|... ++..+++|.+........+.+.+|+.+++.++|||++++++.+..+...++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 356888999999999999999654 5889999999877666677889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ...+++..+..++.|+++++.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 91 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 163 (292)
T cd06644 91 CPGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-- 163 (292)
T ss_pred CCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence 9999998876442 235889999999999999999999987 999999999999999999999999998754321
Q ss_pred cccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
........++..|+|||.+. ...++.++|+|||||++|||++|+.||...
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 11122346788999999874 445788999999999999999999998654
No 176
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=2.2e-30 Score=259.94 Aligned_cols=198 Identities=28% Similarity=0.453 Sum_probs=164.5
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
+.||+|+||.||+|.. .+++.+|+|...... .+....+.+|++++++++||||+++++++......++|+||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999965 468899999876543 34456789999999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
..++... ...+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.+||+|||++..............
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 9888532 235789999999999999999999987 99999999999999999999999999875432211111111
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
...+..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~ 201 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLS 201 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 123457999999988889999999999999999998 888885433
No 177
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=2.5e-30 Score=260.24 Aligned_cols=201 Identities=28% Similarity=0.449 Sum_probs=169.2
Q ss_pred CCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+|++.+.||+|+||.||++....+..+|+|.+..... ....+.+|++++++++||||+++++++...+..++|+||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 4778899999999999999877777899999865422 335678899999999999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|.+++.... ..+++.....++.|+++++.|||+.+ ++||||||+||++++++.+||+|||+++........ .
T Consensus 84 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~ 157 (256)
T cd05059 84 GCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-S 157 (256)
T ss_pred CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccccccc-c
Confidence 99999885432 35889999999999999999999987 999999999999999999999999999765322111 1
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.....++..|+|||.+.+..++.++|+||||+++|||++ |+.||....
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 206 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFS 206 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCC
Confidence 111123457999999988889999999999999999999 788886543
No 178
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.7e-30 Score=275.44 Aligned_cols=199 Identities=23% Similarity=0.294 Sum_probs=166.0
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC------
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER------ 503 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 503 (656)
..++|++.+.||+|+||.||++.. ..++.||||++... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 356899999999999999999954 46889999998754 233345678899999999999999999987543
Q ss_pred CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
...++||||+++ +|...+. ..+++..+..++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence 346999999975 5555552 23778889999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
++..... .......+|..|+|||++.+..++.++|||||||++|||++|+.||...+
T Consensus 173 a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 229 (364)
T cd07875 173 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 229 (364)
T ss_pred ccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence 9764322 11223468899999999999899999999999999999999999996543
No 179
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=3.5e-30 Score=261.55 Aligned_cols=204 Identities=25% Similarity=0.414 Sum_probs=166.9
Q ss_pred CCCCCcccccCceEEEEEEeCC----CCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc-----
Q 006211 437 FSSANKLGEGGFGPVYKGNLPR----GQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE----- 505 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 505 (656)
|++.+.||+|+||.||+|.... +..||+|+++... ....+.+.+|+..++.++|||++++++.+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999996532 3679999987542 3345678999999999999999999998866544
Q ss_pred -eEEEEEecCCCChhhhhhCCC---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEec
Q 006211 506 -NMLIYEYLPNKSLDLYLFDPI---RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDF 581 (656)
Q Consensus 506 -~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~Df 581 (656)
.++++||+++++|..++.... ....+++.....++.|++.||.|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 789999999999998874422 2235889999999999999999999987 999999999999999999999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
|+++...............++..|+|||.+....++.++|||||||++|||++ |..||....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~ 220 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE 220 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 99986543322211222234678999999988889999999999999999999 888885543
No 180
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.9e-30 Score=279.77 Aligned_cols=195 Identities=22% Similarity=0.263 Sum_probs=165.3
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
...|.+.+.||+|+||.||++... .++.||||.... ..+.+|++++++++|+||+++++++......++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457888999999999999999654 578899996432 2356899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+. ++|..++... ...+++..++.++.|+++||.|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 242 ~~-~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 YR-SDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 95 6777776432 235899999999999999999999987 99999999999999999999999999986543322
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
........||..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 316 ~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 316 TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 222223578999999999999999999999999999999999887653
No 181
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=3.3e-30 Score=268.03 Aligned_cols=197 Identities=24% Similarity=0.406 Sum_probs=158.0
Q ss_pred CCcccccCceEEEEEEeC---CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee--CCceEEEEEecC
Q 006211 440 ANKLGEGGFGPVYKGNLP---RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE--RDENMLIYEYLP 514 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 514 (656)
.++||+|+||+||+|... +++.+|+|.+..... ...+.+|+.++++++||||+++++++.. ....++++||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999653 467899999865432 2456789999999999999999998854 446789999986
Q ss_pred CCChhhhhhCC------CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEE----cCCCcEEEEeccCc
Q 006211 515 NKSLDLYLFDP------IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILL----DNELNPKISDFGMA 584 (656)
Q Consensus 515 ~g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl----~~~~~~kl~DfGla 584 (656)
+ +|..++... .....+++..+..++.|++.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 H-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred C-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4 666665321 11235888999999999999999999987 9999999999999 45678999999999
Q ss_pred cccccCccc-cccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 585 KLFRKDVDE-ANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 585 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+.+...... .......+|+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 876432211 12234578999999998876 45889999999999999999999999643
No 182
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.7e-30 Score=263.06 Aligned_cols=199 Identities=24% Similarity=0.394 Sum_probs=171.0
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
++|++.+.||+|+||.||+|.. .+++.+|+|.++.........+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4677788999999999999954 468899999987665555566889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.. ...+++.+...++.|++.++.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 99999988743 335889999999999999999999987 9999999999999999999999999987654321
Q ss_pred ccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.......|+..|+|||.+. ...++.++|+|||||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~ 211 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFD 211 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccc
Confidence 1223346889999999874 45578899999999999999999999854
No 183
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=6.8e-30 Score=304.52 Aligned_cols=190 Identities=26% Similarity=0.506 Sum_probs=162.0
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
...+...+.||+|+||.||+|.. .++..||||+++...... .+|++.+++++||||++++++|.+.+..++||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc----HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 44577788999999999999965 578999999987543221 3468899999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++|+|.+++. .++|.++..++.++++||+|||+.++.+++||||||+||+++.++.+++. ||........
T Consensus 765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~-- 835 (968)
T PLN00113 765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD-- 835 (968)
T ss_pred CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--
Confidence 99999999984 27899999999999999999997666679999999999999999888875 6665432211
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
....+++.|+|||++.+..++.++|||||||++|||+||+.|+.
T Consensus 836 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 836 ----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred ----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 12257889999999999999999999999999999999999984
No 184
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=3.8e-30 Score=274.14 Aligned_cols=208 Identities=27% Similarity=0.433 Sum_probs=170.7
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCC
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERD 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 504 (656)
..++|.+.++||+|+||.||+|... .+..||+|+++... ....+.+.+|+.++.++. ||||++++++|....
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3446778899999999999999642 34689999997653 233456889999999997 999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCc---------------------------------------------------------
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIR--------------------------------------------------------- 527 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 527 (656)
..++|+||+++|+|..+++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999988853211
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEE
Q 006211 528 --------------------------------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNIL 569 (656)
Q Consensus 528 --------------------------------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NIL 569 (656)
...+++.....++.|++.||.|||+.+ ++||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEE
Confidence 123677788899999999999999887 999999999999
Q ss_pred EcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 570 LDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 570 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
++.++.+||+|||+++...............++..|+|||.+....++.++|||||||++|||++ |+.||....
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~ 346 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELP 346 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 99999999999999986533222122223356788999999988889999999999999999998 888886543
No 185
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.2e-30 Score=265.37 Aligned_cols=201 Identities=26% Similarity=0.410 Sum_probs=174.8
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..+|+..+.||+|++|.||++.. .+++.||+|.+........+.+.+|+.+++.++|||++++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 46788999999999999999964 57899999998765555556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++.. ..+++..+..++.+++.+|.|||+.+ ++||||||+|||++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred cCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 999999988743 34788999999999999999999987 99999999999999999999999999876533221
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~ 219 (297)
T cd06656 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (297)
T ss_pred --CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1223467889999999988889999999999999999999999996543
No 186
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=252.43 Aligned_cols=199 Identities=23% Similarity=0.369 Sum_probs=169.2
Q ss_pred CCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCCCC
Q 006211 440 ANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPNKS 517 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 517 (656)
.+.||+|+|+.|-.+ .+.++..+|||++.+...-.+.++.+|++++.+. .|+||++++++|+++...|+|||-|.||+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 378999999999988 6788999999999888666677889999999888 59999999999999999999999999999
Q ss_pred hhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC---cEEEEeccCccccccCcc--
Q 006211 518 LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL---NPKISDFGMAKLFRKDVD-- 592 (656)
Q Consensus 518 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~---~~kl~DfGla~~~~~~~~-- 592 (656)
|...+.. +..+++.++.++.+.|+.||.+||..+ |.|||+||+|||..... -+|||||.+..-+....+
T Consensus 163 lLshI~~---~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s 236 (463)
T KOG0607|consen 163 LLSHIQK---RKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS 236 (463)
T ss_pred HHHHHHH---hhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence 9888754 345899999999999999999999998 99999999999997554 389999998864432211
Q ss_pred ---cccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 593 ---EANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 593 ---~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
.+...+.+|+..|||||+.. ...|+.+.|.||||||+|-||+|.+||.+...
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg 296 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG 296 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence 12223468999999999763 34578899999999999999999999977654
No 187
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=1.8e-30 Score=264.47 Aligned_cols=207 Identities=26% Similarity=0.439 Sum_probs=172.5
Q ss_pred hcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCce
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 506 (656)
.++|++.+.||+|+||.||++... .+..+|+|.+.... ......+.+|+.++..++|||++++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999543 24689999986543 23445788999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEE
Q 006211 507 MLIYEYLPNKSLDLYLFDPIR-------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKIS 579 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~ 579 (656)
++||||+++++|..++..... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 999999999999998854221 224688899999999999999999987 9999999999999999999999
Q ss_pred eccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 580 DFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 580 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
|||+++...............++..|+|||.+....++.++|||||||++|||++ |+.||....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 226 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS 226 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC
Confidence 9999976543322222233456788999999988889999999999999999998 888886543
No 188
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=4.5e-30 Score=258.13 Aligned_cols=202 Identities=28% Similarity=0.414 Sum_probs=173.8
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|++|.||++.. .+++.|++|.+... .....+.+.+|+++++.++|||++++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 467788999999999999965 46889999998643 334556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ....+++.....++.+++.+|.|||+.+ ++|+||+|+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999988653 2346889999999999999999999987 99999999999999999999999999886543221
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......+++.|+|||++.+..++.++|+|||||+++||++|+.||....
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 205 (256)
T cd08529 157 --FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN 205 (256)
T ss_pred --hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 1223467889999999998889999999999999999999999996544
No 189
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=1.6e-30 Score=262.06 Aligned_cols=198 Identities=31% Similarity=0.528 Sum_probs=170.6
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHH--HHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLE--EFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
|++.+.||+|+||+||++... +++.+|+|++......... ...+|+.++++++||||+++++++......++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 566789999999999999665 4668999999887544332 3456999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++. ....+++..+..++.|++++|.+||+.+ ++|+||||+||++++++.++|+|||.+..... ..
T Consensus 81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NN 152 (260)
T ss_dssp TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTS--TT
T ss_pred cccccccccc---cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc--cc
Confidence 9999998885 3456899999999999999999999987 99999999999999999999999999975411 12
Q ss_pred ccccccccccccccccccc-CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......++..|+|||.+. ...++.++|+||||+++++|++|+.||...
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2333456788999999998 788999999999999999999999999765
No 190
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=3.2e-30 Score=261.51 Aligned_cols=199 Identities=26% Similarity=0.360 Sum_probs=159.3
Q ss_pred CcccccCceEEEEEEeCC---CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNLPR---GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||+|...+ ...+++|.+.... ......+.+|+..++.++||||+++++.+......++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 369999999999995433 3478889876543 233456789999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 517 SLDLYLFDPIR--RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 517 ~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+|..++..... ....++.....++.|++.||.|||+++ ++||||||+|||++.++.+||+|||++..........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99998865322 223467788899999999999999987 9999999999999999999999999986533221111
Q ss_pred ccccccccccccccccccC-------CCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKK-------GIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~-------~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
......++..|+|||++.. ..++.++|||||||++|||++ |+.||...
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 1223345678999998642 356789999999999999999 77777544
No 191
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=2.8e-30 Score=263.39 Aligned_cols=203 Identities=26% Similarity=0.437 Sum_probs=167.6
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCC----EEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQ----EFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
.++|+..++||+|+||+||+|.. .+++ .||+|+++... ....+.+.+|+.++..++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 35678889999999999999964 3444 48999987543 3345678899999999999999999999875 4578
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
+++||+++|+|..++... ...+++...+.++.|+++||.|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 85 l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred EEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeec
Confidence 999999999999888543 235889999999999999999999987 999999999999999999999999999876
Q ss_pred ccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 588 RKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 588 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.............++..|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 215 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI 215 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence 43222111222234678999999988889999999999999999998 88888653
No 192
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=1.8e-30 Score=274.38 Aligned_cols=198 Identities=23% Similarity=0.299 Sum_probs=165.5
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD----- 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 504 (656)
..++|+..+.||+|+||.||++.. ..++.+|||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999954 468899999987542 233456788999999999999999999886432
Q ss_pred -ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 505 -ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 505 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
..++||||+++ ++...+. ..+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 46899999976 4544442 23788889999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
++..... .......+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 166 ~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 166 ARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred cccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9764322 1222346889999999999888999999999999999999999999654
No 193
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=1.5e-30 Score=293.41 Aligned_cols=208 Identities=24% Similarity=0.352 Sum_probs=169.2
Q ss_pred HHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--Cce
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DEN 506 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 506 (656)
...++|++.+.||+|+||+||++.. ..+..+|+|.+... .......+..|+.++.+++||||+++++++... ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456899999999999999999965 45778999988653 233456788999999999999999999988543 468
Q ss_pred EEEEEecCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCcEecccCCCCEEEcCC--------
Q 006211 507 MLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSN----FRVIHRDLKASNILLDNE-------- 573 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~----~~iiH~Dikp~NILl~~~-------- 573 (656)
++||||+++++|..++.... ....+++..++.|+.||+.||.|||+.+. .+|+||||||+||||+.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999998885422 23468999999999999999999998542 349999999999999642
Q ss_pred ---------CcEEEEeccCccccccCccccccccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 574 ---------LNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 574 ---------~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..+||+|||++..+.... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 348999999997653221 1223478999999998854 45889999999999999999999999643
No 194
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=2.7e-30 Score=263.25 Aligned_cols=207 Identities=30% Similarity=0.449 Sum_probs=169.9
Q ss_pred hcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCce
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 506 (656)
.++|++.+.||+|++|.||+|... .+..|++|.+.... ......+.+|+.+++.++|+||+++++++.+....
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 456888999999999999999654 35678999887543 33345688999999999999999999999988899
Q ss_pred EEEEEecCCCChhhhhhCCCc----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC---cEEEE
Q 006211 507 MLIYEYLPNKSLDLYLFDPIR----RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL---NPKIS 579 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~---~~kl~ 579 (656)
++||||+++++|..++..... ...+++..++.++.||+.+|.|||+.+ ++||||||+||+++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 999999999999998854321 235889999999999999999999987 99999999999998765 59999
Q ss_pred eccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 580 DFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 580 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
|||+++................+..|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~ 226 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT 226 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9999986533221111222233567999999988889999999999999999997 988886543
No 195
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=4e-30 Score=260.36 Aligned_cols=203 Identities=21% Similarity=0.362 Sum_probs=172.3
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|+||.||+|.. .+++.||||.++.. .......+.+|+.+++.++|||++++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688999999999999999965 46899999987542 2333456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 511 EYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||+++++|..++.... ....+++.....++.++++||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999988774322 2345788999999999999999999987 99999999999999999999999999876543
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
... ......+++.|+|||.+.+..++.++|+||||+++|||++|+.||...
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 221 122346788999999998888999999999999999999999998543
No 196
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=3.9e-30 Score=263.64 Aligned_cols=207 Identities=26% Similarity=0.455 Sum_probs=169.4
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 505 (656)
..++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3567899999999999999998542 24579999886543 2333467889999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCc-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEE
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIR-------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl 578 (656)
.++||||+++|+|..++..... ....++.....++.|++.||.|||+.+ ++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999854211 234567788899999999999999987 999999999999999999999
Q ss_pred EeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 579 SDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 579 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
+|||+++...............++..|+|||.+.+..++.++|+|||||++|||++ |+.||...
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~ 225 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 225 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999976543222112222345678999999988889999999999999999998 67787543
No 197
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=3.7e-30 Score=264.05 Aligned_cols=205 Identities=27% Similarity=0.421 Sum_probs=169.2
Q ss_pred CCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
+|++.+.||+|+||.||+|... ....+++|.+.... ....+++.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999542 23578999887553 2345678899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCC---------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCC
Q 006211 509 IYEYLPNKSLDLYLFDPI---------------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASN 567 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~N 567 (656)
++||+++++|..++.... ....+++..++.++.|++.+|.|||+.+ ++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999998875321 1134788999999999999999999987 9999999999
Q ss_pred EEEcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 568 ILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 568 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
||+++++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 9999999999999999976533222112222345678999999988889999999999999999998 988886543
No 198
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=5.6e-30 Score=259.68 Aligned_cols=200 Identities=28% Similarity=0.391 Sum_probs=162.0
Q ss_pred CcccccCceEEEEEEeCC---CCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNLPR---GQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||+|...+ +..+++|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999996543 45799998876532 33346888999999999999999999999989999999999999
Q ss_pred ChhhhhhCCC--cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 517 SLDLYLFDPI--RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 517 ~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+|..++.... .....++..+..++.|++.++.|||+.+ ++||||||+||+++.++.++|+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999885422 1234567788899999999999999987 9999999999999999999999999997543222112
Q ss_pred ccccccccccccccccccCC-------CCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKG-------IYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~-------~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
......++..|+|||++... .++.++|+||||+++|||++ |+.||....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 214 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLS 214 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCC
Confidence 22234567889999988542 35789999999999999996 999996544
No 199
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=3.7e-30 Score=260.07 Aligned_cols=203 Identities=28% Similarity=0.441 Sum_probs=170.8
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.+|+..+.||+|++|.||+|.. ..++.+|+|++.... .....+.+|++++++++|||++++++++......+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 3467788999999999999955 458899999987543 33567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.... ...+++..++.++.|++++|.|||+++ ++||||||+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~- 159 (263)
T cd05052 85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 159 (263)
T ss_pred CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee-
Confidence 9999999885432 345889999999999999999999987 99999999999999999999999999976543211
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
........+..|+|||.+.+..++.++|||||||++|||++ |..|+....
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 210 (263)
T cd05052 160 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 210 (263)
T ss_pred eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 11112234567999999988889999999999999999998 888886533
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.6e-30 Score=264.86 Aligned_cols=200 Identities=26% Similarity=0.437 Sum_probs=174.2
Q ss_pred cCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.+|+..+.||.|++|.||++. ..+++.|++|.+........+.+.+|+.+++.++|||++++++.+...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 458888999999999999995 4578999999987665555677889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.. ..+++.++..++.+++.++.|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~- 170 (296)
T cd06655 99 AGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS- 170 (296)
T ss_pred CCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc-
Confidence 99999988742 34789999999999999999999987 99999999999999999999999999876543221
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+.+..++.++|+|||||++|+|++|+.||....
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~ 219 (296)
T cd06655 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (296)
T ss_pred -cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1223467889999999988889999999999999999999999996543
No 201
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=5.1e-30 Score=261.92 Aligned_cols=199 Identities=26% Similarity=0.430 Sum_probs=170.0
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
|++.+.||+|+||.||++... ++..+++|.+........+.+.+|+++++.++|||++++++.+......++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567789999999999999654 4778899998776666667889999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++... ...+++..+..++.|++++|.|||+.+ ++||||||+||+++.++.++|+|||++....... ..
T Consensus 87 ~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~ 159 (282)
T cd06643 87 GAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QR 159 (282)
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--cc
Confidence 9998877532 345899999999999999999999987 9999999999999999999999999987543221 12
Q ss_pred ccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+. ...++.++|+|||||++|||++|++||...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 22346788999999873 345788999999999999999999998643
No 202
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=267.43 Aligned_cols=195 Identities=26% Similarity=0.421 Sum_probs=169.4
Q ss_pred CCcccccCceEEEEE-EeCCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 440 ANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
.+.||+|.||+||-| ..++|+.||||++.+.. .+....+++|+.||..++||.||.+.-.|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 588999999999999 45679999999987652 334467899999999999999999999999999999999999776
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC---CcEEEEeccCccccccCccc
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE---LNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~---~~~kl~DfGla~~~~~~~~~ 593 (656)
-|+.+|.. ++..+++.....+..||+.||.|||.++ |+|+||||+|||+... -++||||||.|+.+...
T Consensus 649 MLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk--- 720 (888)
T KOG4236|consen 649 MLEMILSS--EKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK--- 720 (888)
T ss_pred HHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh---
Confidence 66666643 4556888888999999999999999998 9999999999999654 46999999999987542
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......+||+.|+|||++.++.|+..-|+||.|||+|--|+|..||...
T Consensus 721 sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 3334579999999999999999999999999999999999999999643
No 203
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=4.3e-30 Score=263.57 Aligned_cols=198 Identities=27% Similarity=0.374 Sum_probs=172.5
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|++|.||++... +++.+|+|++.... .+..+.+.+|++++++++||||+++++++......++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888899999999999999654 68899999986532 234567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++.. ...+++.....++.|++++|.|||+.+ ++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 99999999988854 245889999999999999999999987 999999999999999999999999999765432
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.....+++.|+|||.+.+...+.++|+||||+++|+|++|+.||....
T Consensus 155 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred -----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 223467889999999988888999999999999999999999986544
No 204
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=3.8e-30 Score=262.56 Aligned_cols=203 Identities=25% Similarity=0.406 Sum_probs=174.2
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
.++|++.+.||.|++|.||++.. .++..+|+|++........+.+.+|++++++++|||++++++.+......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 35688899999999999999965 46889999999876666667889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (280)
T cd06611 84 CDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL- 157 (280)
T ss_pred cCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence 9999999887542 235889999999999999999999987 9999999999999999999999999987543221
Q ss_pred cccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......++..|+|||.+. ...++.++|+||||+++|||++|+.||....
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~ 212 (280)
T cd06611 158 -QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELN 212 (280)
T ss_pred -cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCC
Confidence 1222346788999999874 3457789999999999999999999996543
No 205
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=4e-30 Score=264.53 Aligned_cols=204 Identities=27% Similarity=0.425 Sum_probs=167.5
Q ss_pred cCCCCCCcccccCceEEEEEEeCC---------------CCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR---------------GQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLG 498 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~---------------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~ 498 (656)
++|++.+.||+|+||.||++.... ...||+|.++.. .....+.+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578899999999999999985432 235899998764 2334557899999999999999999999
Q ss_pred EEeeCCceEEEEEecCCCChhhhhhCCCc---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEE
Q 006211 499 YCTERDENMLIYEYLPNKSLDLYLFDPIR---------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNIL 569 (656)
Q Consensus 499 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NIL 569 (656)
++......++||||+++++|..++..... ...+++..+..++.++++||.|||+.+ ++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 99999999999999999999988854211 123678899999999999999999987 999999999999
Q ss_pred EcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc--CCCCCCC
Q 006211 570 LDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS--SKRNARY 641 (656)
Q Consensus 570 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt--g~~p~~~ 641 (656)
+++++.+||+|||++................++..|+|||.+....++.++|+|||||+++||++ +..||..
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999999999976543222222223345678999999988889999999999999999998 4556644
No 206
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=3e-30 Score=271.31 Aligned_cols=198 Identities=24% Similarity=0.349 Sum_probs=165.8
Q ss_pred HHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTER----- 503 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 503 (656)
...++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 3567899999999999999999954 5688999999875422 2345677899999999999999999887543
Q ss_pred -CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 504 -DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 504 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
...+++++++ +++|..++. ...+++..+..++.|++.||.|||+.+ |+||||||+|||+++++.+||+|||
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCc
Confidence 3468899987 778877763 235899999999999999999999987 9999999999999999999999999
Q ss_pred CccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+++..... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 164 LARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred cceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 99764321 223468899999999876 56889999999999999999999999653
No 207
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.4e-30 Score=266.55 Aligned_cols=206 Identities=29% Similarity=0.411 Sum_probs=169.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC--------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP--------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD 504 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 504 (656)
++|.+.+.||+|+||.||++... +...+|+|.++... .....++.+|++++..+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56889999999999999998542 23579999997642 33455788899999999 7999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCc-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIR-------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
..++|+||+++++|..++..... ...+++.+++.++.|++.+|.|||+.+ ++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEEc
Confidence 99999999999999999864321 234888999999999999999999987 99999999999999
Q ss_pred CCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 572 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.++.+||+|||+++...............++..|+|||.+.+..++.++|+|||||++|||++ |+.||....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 999999999999976532211111112234568999999988889999999999999999998 888875433
No 208
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=5.2e-30 Score=260.30 Aligned_cols=202 Identities=26% Similarity=0.439 Sum_probs=163.5
Q ss_pred CCCCcccccCceEEEEEEeCC-CC--EEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC------Cce
Q 006211 438 SSANKLGEGGFGPVYKGNLPR-GQ--EFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER------DEN 506 (656)
Q Consensus 438 ~~~~~iG~G~~g~V~~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 506 (656)
.+.+.||+|+||.||+|.... +. .+|+|.++.. .....+.+.+|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 466889999999999997644 32 6899988754 334456788999999999999999999987432 246
Q ss_pred EEEEEecCCCChhhhhhCC---CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 507 MLIYEYLPNKSLDLYLFDP---IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
++++||+++|+|..++... .....+++.....++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence 8999999999998876421 12235789999999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
++...............+++.|+|||.+....++.++||||||+++|||++ |+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 218 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV 218 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 986543221111122345678999999998889999999999999999999 78888643
No 209
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=2.3e-30 Score=265.95 Aligned_cols=208 Identities=27% Similarity=0.404 Sum_probs=172.2
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCC-ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSAT-STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 504 (656)
..++|+..+.||+|+||.||++... ....+|+|.+... ..+...++.+|+.++.++ +||||+++++++....
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 4457888899999999999999653 2357999998754 233445688999999999 8999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCC-------------CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDP-------------IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
..+++|||+++++|..++... .....+++..++.++.|++.||.|||+.+ ++||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEc
Confidence 999999999999999988532 12345889999999999999999999987 99999999999999
Q ss_pred CCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 572 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 999999999999986543322222222334678999999988889999999999999999998 888886443
No 210
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=5.5e-30 Score=258.69 Aligned_cols=202 Identities=26% Similarity=0.435 Sum_probs=169.0
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.++||+|+||.||+|...+...||+|+++.... ..+++.+|++++++++||||+++++.+. ....++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 46889999999999999999877777899999975432 3457889999999999999999999875 456799999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++... ....+++..+..++.+++++|.|||+.+ ++||||||+||++++++.++|+|||.++....... .
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-~ 158 (262)
T cd05071 84 KGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 158 (262)
T ss_pred CCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc-c
Confidence 99999998542 2235788999999999999999999987 99999999999999999999999999976543221 1
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
......++..|+|||...+..++.++|+|||||++|||++ |+.||....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~ 208 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 208 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 1222345678999999988889999999999999999999 777876543
No 211
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.2e-30 Score=266.41 Aligned_cols=207 Identities=27% Similarity=0.399 Sum_probs=171.2
Q ss_pred hcCCCCCCcccccCceEEEEEEe--------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL--------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER 503 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 503 (656)
.++|++.+.||+|+||.||++.. .++..+|+|.+.... ....+++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 45678889999999999999953 124579999887542 34456788999999999 899999999999999
Q ss_pred CceEEEEEecCCCChhhhhhCCCc-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEE
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPIR-------------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILL 570 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl 570 (656)
...+++|||+++++|..++..... ...+++.++..++.|+++||.|||+.+ ++||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence 999999999999999999864321 235788899999999999999999987 9999999999999
Q ss_pred cCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 571 DNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 571 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
+.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |..|+....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999986543222222222345678999999988889999999999999999998 777775443
No 212
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=5.3e-30 Score=264.41 Aligned_cols=205 Identities=29% Similarity=0.429 Sum_probs=171.2
Q ss_pred hcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 505 (656)
.++|+..+.||+|+||.||++.. ..+..+|+|+++... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 35688899999999999999953 124579999987653 33456789999999999 79999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++++||+++++|..++.... ...+++.+...++.+++.+|.|||+.+ ++|+||||+|||++.++.++|+|||+++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence 999999999999999885422 233799999999999999999999987 9999999999999999999999999998
Q ss_pred ccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
...............++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~ 247 (302)
T cd05055 190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGM 247 (302)
T ss_pred cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence 6543222112222345678999999988889999999999999999998 99988543
No 213
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=2e-30 Score=283.62 Aligned_cols=203 Identities=23% Similarity=0.303 Sum_probs=162.5
Q ss_pred HHHHHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCC------CceeeEEEEEe
Q 006211 429 DIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH------VNLLRVLGYCT 501 (656)
Q Consensus 429 ~~~~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~ 501 (656)
++....++|++.++||+|+||+||+|.. ..++.||||+++... ...+....|+.+++.++| ++++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3344567899999999999999999954 467889999986532 223345667777777654 45888888887
Q ss_pred eC-CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecccCCCCEEEcCCC-----
Q 006211 502 ER-DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-YSNFRVIHRDLKASNILLDNEL----- 574 (656)
Q Consensus 502 ~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiH~Dikp~NILl~~~~----- 574 (656)
.. ...++|||++ +++|..++.. ...+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccc
Confidence 54 4678999987 6777777643 3458899999999999999999997 46 99999999999998765
Q ss_pred -----------cEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 575 -----------NPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 575 -----------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.+||+|||.+.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred ccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 49999999885422 12234578999999999999999999999999999999999999997654
Q ss_pred C
Q 006211 644 T 644 (656)
Q Consensus 644 ~ 644 (656)
.
T Consensus 350 ~ 350 (467)
T PTZ00284 350 N 350 (467)
T ss_pred h
Confidence 3
No 214
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=4e-30 Score=263.48 Aligned_cols=199 Identities=25% Similarity=0.419 Sum_probs=161.4
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhc---CCCceeeEEEEEeeC-----C
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST--QGLEEFKNEVSLTARL---QHVNLLRVLGYCTER-----D 504 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~-----~ 504 (656)
+|++.+.||+|+||+||+|.. .+++.||+|.++.... .....+.+|+.+++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 478889999999999999955 4688999998875421 1223455677666655 799999999987642 3
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..++++|++++ +|..++... ....+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 57899999975 777776442 2234889999999999999999999987 999999999999999999999999999
Q ss_pred cccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+...... ......++..|+|||.+.+..++.++|||||||++|||++|++||...
T Consensus 156 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 156 RIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred ccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 7654321 122346788999999998888999999999999999999999998543
No 215
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=5.4e-30 Score=261.42 Aligned_cols=206 Identities=26% Similarity=0.366 Sum_probs=171.8
Q ss_pred hcCCCCCCcccccCceEEEEEEeCC-----CCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee-CCce
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPR-----GQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTE-RDEN 506 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 506 (656)
.++|++.+.||+|+||.||+|.... +..|++|++... .....+.+.+|+.++++++|||++++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999997654 678999988754 23345678899999999999999999998766 4678
Q ss_pred EEEEEecCCCChhhhhhCCCcC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEec
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRR-----YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDF 581 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~Df 581 (656)
++++||+++++|..++...... ..+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999988543222 46889999999999999999999987 999999999999999999999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
|+++.+.............++..|+|||.+.+..++.++|||||||++||+++ |+.||...
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 223 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI 223 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence 99986543322211222345678999999988889999999999999999999 99998643
No 216
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=7.1e-30 Score=261.17 Aligned_cols=201 Identities=30% Similarity=0.427 Sum_probs=167.9
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|++.+.||+|++|.||+|.. .++..||+|.++... ....+.+.+|+.+++.++|||++++++++..+...++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477889999999999999965 468899999986542 22345678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
++ ++|..++........+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 578777754333456899999999999999999999987 9999999999999999999999999997543221
Q ss_pred ccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......+++.|+|||.+.+. .++.++|||||||++|||+||+.||...
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 112223567889999987654 4788999999999999999999999643
No 217
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=5.9e-30 Score=263.51 Aligned_cols=203 Identities=29% Similarity=0.447 Sum_probs=166.8
Q ss_pred cCCCCCCcccccCceEEEEEEeCC-C--CEEEEEEccCC-ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR-G--QEFAVKRLSAT-STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 509 (656)
++|++.+.||+|+||.||+|...+ + ..+++|.++.. .....+.+.+|+.++.++ +||||+++++++......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999996643 3 35788888753 334456788999999999 799999999999999999999
Q ss_pred EEecCCCChhhhhhCCC-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcE
Q 006211 510 YEYLPNKSLDLYLFDPI-------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~ 576 (656)
+||+++++|.+++.... ....+++..+..++.|++.||+|||+.+ ++||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999885421 1134788999999999999999999987 9999999999999999999
Q ss_pred EEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 577 KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 577 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
||+|||++...... ........+..|+|||.+....++.++|||||||++|||++ |+.||....
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~ 223 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT 223 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999998642211 11111123457999999988889999999999999999998 999986543
No 218
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=4.9e-30 Score=262.58 Aligned_cols=202 Identities=23% Similarity=0.374 Sum_probs=170.1
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|++.+.||+|+||.||++... .+..+|+|.+... .......+.+|+.++.+++||||+++++.+...+..++|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35788899999999999999664 6899999988754 333456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++........+++..+..++.+++++|.|||+.. +++|+||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 999999888865333346899999999999999999999742 39999999999999999999999999997653221
Q ss_pred ccccccccccccccccccccCCC------CCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGI------YSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~------~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+.+.. ++.++|+|||||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 12235778899999885443 478999999999999999999999543
No 219
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=7.7e-30 Score=257.28 Aligned_cols=202 Identities=28% Similarity=0.469 Sum_probs=169.8
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.++||+|+||.||++....+..+|+|.++.... ..+.+.+|+.++++++|||++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46888999999999999999887888999999876433 3456889999999999999999999875 456899999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++... ....+++.++..++.+++.+|.|||+.+ ++||||+|+||++++++.++|+|||++..+......
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05070 84 KGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCcccc-
Confidence 99999988543 2235789999999999999999999987 999999999999999999999999999765432211
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
......++..|+|||.+....++.++|+||||+++|||++ |+.||....
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 208 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 208 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 1112234567999999988889999999999999999999 888886533
No 220
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=6.6e-30 Score=258.54 Aligned_cols=202 Identities=25% Similarity=0.389 Sum_probs=168.3
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-----ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--Cce
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-----STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DEN 506 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 506 (656)
++|++.+.||+|+||.||++.. .++..||+|.+... .....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999965 45889999987532 123345788899999999999999999988663 457
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++++||+++++|..++.. ...+++.....++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 899999999999988753 234788889999999999999999987 99999999999999999999999999976
Q ss_pred cccCcc-ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDVD-EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...... ........++..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 532111 11122345788999999998888899999999999999999999998643
No 221
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=9.6e-30 Score=257.33 Aligned_cols=201 Identities=26% Similarity=0.429 Sum_probs=171.2
Q ss_pred CCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCC------hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATS------TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
+|+..+.||+|+||+||+|...+++.+|+|.+.... .+..+.+.+|++++++++|+||+++.+++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999987789999999886432 12335688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
+||+++++|..++.. ...+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 999999999998853 235788999999999999999999987 99999999999999999999999999875432
Q ss_pred Cc----cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 590 DV----DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 590 ~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. .........++..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccC
Confidence 11 011112345788999999998888999999999999999999999999643
No 222
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=8.1e-30 Score=262.28 Aligned_cols=206 Identities=29% Similarity=0.438 Sum_probs=171.3
Q ss_pred hcCCCCCCcccccCceEEEEEEeCC-----------------CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceee
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPR-----------------GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLR 495 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 495 (656)
.++|++.+.||+|+||.||++.... +..||+|.+.... ....+.+.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999985432 2458999987653 344567889999999999999999
Q ss_pred EEEEEeeCCceEEEEEecCCCChhhhhhCCC--------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCC
Q 006211 496 VLGYCTERDENMLIYEYLPNKSLDLYLFDPI--------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASN 567 (656)
Q Consensus 496 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~N 567 (656)
+++++...+..++++|++++++|..++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999885432 1225889999999999999999999987 9999999999
Q ss_pred EEEcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc--CCCCCCCC
Q 006211 568 ILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS--SKRNARYY 642 (656)
Q Consensus 568 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt--g~~p~~~~ 642 (656)
|+++.++.++|+|||+++...............++..|+|||.+....++.++|||||||++|||++ +..|+...
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~ 237 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL 237 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999999976543322222333456778999999988889999999999999999998 66666543
No 223
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=8.7e-30 Score=256.62 Aligned_cols=199 Identities=34% Similarity=0.530 Sum_probs=170.9
Q ss_pred CcccccCceEEEEEEeCC----CCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLPR----GQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||++.... +..+++|.++..... ..+.+.+|++.+..++|+|++++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999996543 789999999876443 367789999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCc------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 516 KSLDLYLFDPIR------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 516 g~L~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
++|..++..... ...+++..+..++.|+++||.+||+.+ ++||||+|+||++++++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999865421 256899999999999999999999987 99999999999999999999999999987654
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
...........++..|+|||.+....++.++||||||++++||++ |+.||...
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 211 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL 211 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC
Confidence 322222333456889999999988889999999999999999999 58888654
No 224
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2e-30 Score=269.25 Aligned_cols=204 Identities=24% Similarity=0.391 Sum_probs=178.4
Q ss_pred HhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
....|.+.+.||+|.|+.|..+. ..++..||||.+++... ...+.+.+|+++|..++|||||+++.+...+..+++|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 45678899999999999999994 45699999999987643 3345688999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+.+|.+.+++.... .+.+..+..++.|+.++++|||+.+ |+|||||++||||+.+.++||+|||++..+..
T Consensus 134 ~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999996533 3556888899999999999999998 99999999999999999999999999988763
Q ss_pred CccccccccccccccccccccccCCCC-CccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIY-SMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
.......+|++.|.|||++.+..| ++++|+||+|+++|-|++|..||++....
T Consensus 208 ---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk 261 (596)
T KOG0586|consen 208 ---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK 261 (596)
T ss_pred ---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc
Confidence 233445699999999999988776 68999999999999999999999865543
No 225
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=8.7e-30 Score=260.31 Aligned_cols=198 Identities=31% Similarity=0.439 Sum_probs=164.9
Q ss_pred CCCCCcccccCceEEEEEE-----eCCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEE
Q 006211 437 FSSANKLGEGGFGPVYKGN-----LPRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENML 508 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 508 (656)
|+..+.||+|+||+||++. ..++..||+|.++.... .....+.+|+++++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 3788999999999998763 23577899999876532 3456788999999999999999999988654 35789
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
+|||+++++|..++.. ..+++..+..++.|+++||.|||+.+ ++||||||+|||+++++.++|+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999988843 34899999999999999999999987 9999999999999999999999999998654
Q ss_pred cCccccc-cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 589 KDVDEAN-TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 589 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
....... .....++..|+|||.+....++.++||||||+++|||++|+.|+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 3221111 1122345679999999888899999999999999999999999854
No 226
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=6.4e-30 Score=268.59 Aligned_cols=206 Identities=30% Similarity=0.448 Sum_probs=167.5
Q ss_pred hcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC-C
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER-D 504 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 504 (656)
.++|++.+.||+|+||.||+|.. ..++.||||+++... ......+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999952 346789999997643 23345688999999999 689999999988654 4
Q ss_pred ceEEEEEecCCCChhhhhhCCCc---------------------------------------------------------
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIR--------------------------------------------------------- 527 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~--------------------------------------------------------- 527 (656)
..+++|||+++|+|..++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 67899999999999988753210
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccccc
Q 006211 528 -------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIV 600 (656)
Q Consensus 528 -------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 600 (656)
...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++.+||+|||++................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 123678888999999999999999987 9999999999999999999999999997653322222222334
Q ss_pred ccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 601 GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 601 gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 285 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 285 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence 5678999999988889999999999999999997 88888653
No 227
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=99.97 E-value=1.4e-29 Score=259.19 Aligned_cols=210 Identities=23% Similarity=0.331 Sum_probs=144.8
Q ss_pred EEEEEecCCCCCC-----CCCCCCCCccEEEEEEEEecCCCc-EEe------cCCcchhhHHHHHHHHHhhCCCceEEEE
Q 006211 28 IKAGYWLAGREFP-----LSDINSALFTHLICAFAEVDSSTY-QLS------ISSANQQYFSIFANSVRRKNPSIKTLLS 95 (656)
Q Consensus 28 ~~~~y~~~~~~~~-----~~~i~~~~~thi~~~f~~~~~~~~-~~~------~~~~~~~~~~~~~~~~k~~~~~~kvl~s 95 (656)
+++|||.+|.... +.+..++.||||+|||+.+.+++. .+. ........+...++.+|++ ++|||+|
T Consensus 2 ~~vgY~~~w~~~~~~~~~~~~~~~~~yt~i~~AF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~q~~--G~KVllS 79 (312)
T cd02871 2 VLVGYWHNWDNGAGSGRQDLDDVPSKYNVINVAFAEPTSDGGGEVTFNNGSSPGGYSPAEFKADIKALQAK--GKKVLIS 79 (312)
T ss_pred eEEEecCcccCCCCCCCCCcccCCCCCCEEEEcceeecCCCceeEeecccCCcccCChHHHHHHHHHHHHC--CCEEEEE
Confidence 5699998875432 223445899999999999987643 222 1222334556666667765 6999999
Q ss_pred eecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCcc-----CcchHHHHHHHHH
Q 006211 96 IWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNST-----DLNSLGILLDEWK 170 (656)
Q Consensus 96 igg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~-----d~~~~~~ll~~lr 170 (656)
| ||+.. +..+++++.|++|++++++++++|+|||||||||+|... ++++++.||++||
T Consensus 80 i------------GG~~~-----~~~~~~~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~~~~~~~~~~~~~~~~lk~lr 142 (312)
T cd02871 80 I------------GGANG-----HVDLNHTAQEDNFVDSIVAIIKEYGFDGLDIDLESGSNPLNATPVITNLISALKQLK 142 (312)
T ss_pred E------------eCCCC-----ccccCCHHHHHHHHHHHHHHHHHhCCCeEEEecccCCccCCcHHHHHHHHHHHHHHH
Confidence 9 44432 224778899999999999999999999999999999654 6799999999999
Q ss_pred hhcCCCCCcEEEEEeecCCCc--------ccccc--ChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHH
Q 006211 171 ASASDQPELTLSMAVRYSPTH--------ETVSY--PIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTD 240 (656)
Q Consensus 171 ~~l~~~~~~~ls~a~~~~~~~--------~~~~~--~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~ 240 (656)
+++. ++++||+|+...... ....| .++++.+++||+|+|.||.++.. ++...-+. ....+..
T Consensus 143 ~~~~--~~~~lT~AP~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~D~invqfYn~~~~~-----~~~~~~~~-~~~~~~~ 214 (312)
T cd02871 143 DHYG--PNFILTMAPETPYVQGGYAAYGGIWGAYLPLIDNLRDDLTWLNVQYYNSGGMG-----GCDGQSYS-QGTADFL 214 (312)
T ss_pred HHcC--CCeEEEECCCcccccCcccccccCCcchhHHHHHhhhheeEEEEeeccCCCcc-----cccccCCc-cchhHHH
Confidence 9994 389999986432111 11123 36788899999999999987431 11111110 1111223
Q ss_pred HHHHHHHHcC-----------CCCCceeecccCCC
Q 006211 241 FGIREWLRRG-----------FPANKLVLGARASG 264 (656)
Q Consensus 241 ~~v~~~~~~g-----------~p~~Kl~lG~p~yG 264 (656)
.++...+..| +|++||++|+|+.-
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~p~~Kv~iG~pa~~ 249 (312)
T cd02871 215 VALADMLLTGFPIAGNDRFPPLPADKVVIGLPASP 249 (312)
T ss_pred HHHHHHHHcCCCccCCcccccCChhhEEEeccCCC
Confidence 3333444445 89999999999863
No 228
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=8.6e-31 Score=235.85 Aligned_cols=205 Identities=25% Similarity=0.389 Sum_probs=167.3
Q ss_pred cCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSAT-STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 511 (656)
+.......||+|++|.|-+-+ ..+|...|+|++... ..+...+.++|+.+..+. ..|.+|.++|........++.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 344456789999999998874 467999999999765 344556778888876665 79999999999988899999999
Q ss_pred ecCCCChhhhhhC-CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 512 YLPNKSLDLYLFD-PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 512 ~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
.| ..||+.+-.+ ......+++.-.-+|+..+.+||.|||++- .+||||+||+||||+.+|++|+||||++..+..+
T Consensus 126 ~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred Hh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 99 4578766533 223456888889999999999999999875 5999999999999999999999999999876543
Q ss_pred cccccccccccccccccccccc----CCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 591 VDEANTGRIVGTYGYVPPEYVK----KGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~----~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
.... ...|...|||||.+. ...|+-+|||||||+.+.||.+++.|++.+.++
T Consensus 203 iAkt---~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 203 IAKT---MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred hHHH---HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 2222 135667899999885 346899999999999999999999999887654
No 229
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=1.2e-29 Score=256.88 Aligned_cols=201 Identities=30% Similarity=0.501 Sum_probs=169.9
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh---------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST---------QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 505 (656)
+|.+.+.||+|++|.||+|.. .+++.+|+|.+..... +..+.+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999954 4678999998865422 123467889999999999999999999999999
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++++||+++++|..++.. ...+++..+..++.|++.+|.|||+.+ ++||||+|+||++++++.++|+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence 9999999999999988843 245788899999999999999999987 9999999999999999999999999998
Q ss_pred ccccCccc----cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 586 LFRKDVDE----ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 586 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
........ .......++..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 215 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC 215 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence 66432111 1112245788999999998888999999999999999999999999753
No 230
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=8.4e-30 Score=262.22 Aligned_cols=204 Identities=26% Similarity=0.433 Sum_probs=168.2
Q ss_pred cCCCCCCcccccCceEEEEEEeC-----------------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-----------------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRV 496 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 496 (656)
++|++.++||+|+||.||++... +...+|+|++.... .....++.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56889999999999999998432 23468999987643 3345678999999999999999999
Q ss_pred EEEEeeCCceEEEEEecCCCChhhhhhCCCc--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCE
Q 006211 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIR--------RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNI 568 (656)
Q Consensus 497 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NI 568 (656)
++++...+..+++|||+++++|..++..... ...+++.+...++.|++.||.|||+.+ ++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence 9999999999999999999999988854221 124778889999999999999999987 99999999999
Q ss_pred EEcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc--CCCCCCC
Q 006211 569 LLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS--SKRNARY 641 (656)
Q Consensus 569 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt--g~~p~~~ 641 (656)
|++.++.++|+|||+++.+.........+...++..|+|||......++.++|+|||||++|||++ |..||..
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 999999999999999976543222122222344678999998888889999999999999999998 6677754
No 231
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=274.91 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=174.3
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
.|.++..||.|+||.||++..+ .+-..|.|++.....+..++++-|++||..++||+||++++.|...+.++|+.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 3456678999999999999554 344567899988888889999999999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
||-.+..+.+. ...+++.++.-+++|++.+|.|||+++ |||||||+.|||++-+|.++|+|||.+-.... ...
T Consensus 113 GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~q 185 (1187)
T KOG0579|consen 113 GGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQ 185 (1187)
T ss_pred CchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh--HHh
Confidence 99999887654 346899999999999999999999998 99999999999999999999999998864332 233
Q ss_pred ccccccccccccccccc-----cCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYV-----KKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~-----~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
....+.|||+|||||+. +..+|++++||||||++|.||.-+.+|....
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel 238 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL 238 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence 44567999999999976 4567999999999999999999999997543
No 232
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=1.3e-29 Score=254.95 Aligned_cols=202 Identities=21% Similarity=0.342 Sum_probs=173.7
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||.|+||.|+.+.. .+++.+++|.+... ......++.+|+.++++++|+||+++++++.+.+..++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999854 56889999987654 234456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++.... ...+++..+..++.|++++|.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999885432 345889999999999999999999987 99999999999999999999999999986543321
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......+++.|+|||.+.+..++.++|+||||+++|||++|+.||....
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN 205 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC
Confidence 2223467899999999988888999999999999999999999986543
No 233
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.4e-29 Score=256.25 Aligned_cols=202 Identities=27% Similarity=0.430 Sum_probs=168.7
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-----hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--Cce
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-----TQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DEN 506 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 506 (656)
.+|+..+.||+|+||.||++.. .++..|++|++.... .+..+.+.+|+.++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999955 468899999886432 23345688899999999999999999988653 567
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++++||+++++|..++.. ...+++.....++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 899999999999988853 234788999999999999999999887 99999999999999999999999999976
Q ss_pred cccCc-cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDV-DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..... .........++..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 53211 111112245788999999998888999999999999999999999999644
No 234
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=1.2e-29 Score=255.91 Aligned_cols=202 Identities=24% Similarity=0.402 Sum_probs=174.6
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
++|+..+.||+|++|.||++.. .+++.+++|.+........+.+.+|+.++++++|||++++++.+......+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 5688889999999999999965 457889999998765556678899999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++... ...+++.++..++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 83 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 83 GGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 999999887542 245889999999999999999999987 99999999999999999999999999976543211
Q ss_pred cccccccccccccccccccCC---CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKG---IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~---~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+... .++.++|+||||+++|||++|+.||....
T Consensus 157 -~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 157 -KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred -ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 12234678889999998776 78999999999999999999999986543
No 235
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=9.7e-30 Score=258.67 Aligned_cols=199 Identities=27% Similarity=0.393 Sum_probs=173.1
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|+..+.||.|++|.||+|... +++.+|+|++.... ......+.+|+.+++.++|+|++++.+++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36788899999999999999654 68899999987553 33456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... .+++.....++.|++.++.|||+.+ ++|+||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 9999999888432 6889999999999999999999987 9999999999999999999999999998765332
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......++..|+|||.+.+..++.++||||||+++|||+||+.||...
T Consensus 153 -~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 153 -SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred -cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 1222346788899999998888999999999999999999999999643
No 236
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=1.4e-29 Score=258.85 Aligned_cols=201 Identities=31% Similarity=0.497 Sum_probs=168.0
Q ss_pred cCCCCCCcccccCceEEEEEEe-----CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee--CCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-----PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE--RDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 507 (656)
++|++.+.||+|+||.||++.. .++..||+|.+........+.+.+|++++++++||||+++.+++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999853 3578999999987766666788999999999999999999998754 34678
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
+|+||+++++|..++... ...+++..+..++.|++.||.|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 84 lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 999999999999988542 235889999999999999999999987 999999999999999999999999999865
Q ss_pred ccCcccc-ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 588 RKDVDEA-NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 588 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
....... ......++..|+|||.+.+..++.++|+|||||+++||+++..|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 159 PQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred cCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 4322211 1111223456999999988889999999999999999999877653
No 237
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=7.1e-30 Score=265.06 Aligned_cols=205 Identities=27% Similarity=0.413 Sum_probs=168.9
Q ss_pred cCCCCCCcccccCceEEEEEEeC--------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP--------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD 504 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 504 (656)
.+|.+.+.||+|+||.||++... ....+|+|+++... .....++.+|+.+++++ +||||+++++++....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778899999999999999531 24579999987542 34456788999999999 6999999999999988
Q ss_pred ceEEEEEecCCCChhhhhhCCC-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPI-------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
..++++||+++|+|..++.... ....+++.+...++.|++.+|.|||+.+ ++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEEc
Confidence 9999999999999999885422 1235888999999999999999999987 99999999999999
Q ss_pred CCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 572 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
+++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~ 240 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI 240 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999986543221111112234467999999988889999999999999999999 88888544
No 238
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=2.2e-29 Score=252.29 Aligned_cols=196 Identities=29% Similarity=0.444 Sum_probs=166.0
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChh
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLD 519 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 519 (656)
+.||+|+||.||+|...+++.+|+|.++.... .....+.+|+++++.++|||++++++++......++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999887889999999876543 33446889999999999999999999999999999999999999999
Q ss_pred hhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccccc
Q 006211 520 LYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599 (656)
Q Consensus 520 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 599 (656)
.++... ...+++..+..++.+++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++......... .....
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~ 154 (250)
T cd05085 81 SFLRKK--KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLK 154 (250)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCC
Confidence 887542 234789999999999999999999987 999999999999999999999999999754322111 11122
Q ss_pred cccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 600 ~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.++..|+|||.+....++.++||||||+++||+++ |+.||...
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~ 198 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM 198 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 34567999999988889999999999999999999 88898654
No 239
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=7.8e-30 Score=258.23 Aligned_cols=202 Identities=22% Similarity=0.374 Sum_probs=172.5
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
.+|++.+.||+|++|.||++.. .+++.++||.+.... .....++.+|+.+++.++||||+++++++...+..++++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 3677889999999999999964 578999999876532 233457889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 511 EYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 511 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||+++++|..++... .....+++.....++.+++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999887532 22346899999999999999999999987 99999999999999999999999999876543
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||..
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 208 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccc
Confidence 221 12234678899999999888899999999999999999999999854
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=1.4e-29 Score=256.64 Aligned_cols=205 Identities=25% Similarity=0.393 Sum_probs=169.9
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.++++.....||+|+||.||+|.. .++..|++|.+........+.+.+|+.++++++|+||+++++++...+..++++|
T Consensus 6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 85 (268)
T cd06624 6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME 85 (268)
T ss_pred ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence 345555667899999999999964 4577899999887666666788999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEEEeccCccccccC
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl~DfGla~~~~~~ 590 (656)
|+++++|..++.........++..+..++.|++++|.|||+.+ ++||||||+||+++. ++.++|+|||++......
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~ 162 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI 162 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecccC
Confidence 9999999998864322212377888899999999999999987 999999999999986 678999999998755322
Q ss_pred ccccccccccccccccccccccCCC--CCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGI--YSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. .......++..|+|||.+.... ++.++|+||||+++|+|++|+.||...
T Consensus 163 ~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~ 214 (268)
T cd06624 163 N--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL 214 (268)
T ss_pred C--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence 1 1122235788999999986543 788999999999999999999998643
No 241
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=1.1e-29 Score=255.64 Aligned_cols=197 Identities=28% Similarity=0.422 Sum_probs=167.0
Q ss_pred CcccccCceEEEEEEeCC--C--CEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLPR--G--QEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|++|.||+|.... + ..+|+|.++.... ...+++.+|+.++++++||||+++++.+.. ...++++||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999996533 3 3689999987655 556789999999999999999999999888 888999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc-
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA- 594 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~- 594 (656)
++|..++..... ..+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+++.+.......
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 999998865432 45899999999999999999999987 9999999999999999999999999998764422111
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
......++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 204 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGL 204 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 1112356778999999988889999999999999999999 99998543
No 242
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=7.3e-30 Score=263.52 Aligned_cols=202 Identities=29% Similarity=0.457 Sum_probs=166.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCC--EEEEEEccCC-ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQ--EFAVKRLSAT-STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 509 (656)
++|++.+.||+|+||.||+|... ++. .+++|.++.. .....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788899999999999999653 344 4578877643 233456788999999999 899999999999999999999
Q ss_pred EEecCCCChhhhhhCCC-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcE
Q 006211 510 YEYLPNKSLDLYLFDPI-------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~ 576 (656)
+||+++++|..++.... ....+++.+++.++.|++.|+.|||+.+ ++||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 99999999999885422 1235789999999999999999999987 9999999999999999999
Q ss_pred EEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 577 KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 577 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
||+|||++...... ........+..|+|||.+....++.++|||||||++|||+| |..||...
T Consensus 164 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 227 (303)
T cd05088 164 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 227 (303)
T ss_pred EeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccC
Confidence 99999998642211 11111233567999999988889999999999999999998 99998643
No 243
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=289.28 Aligned_cols=207 Identities=21% Similarity=0.302 Sum_probs=178.5
Q ss_pred HHHHHHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC
Q 006211 428 SDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER 503 (656)
Q Consensus 428 ~~~~~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 503 (656)
.++....++|++++.||+|+||.|..++. .+++.||+|++++- .......|..|-.+|..-+.+=|+.+.-.|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 44555568899999999999999999965 45889999999762 233345688999999988899999999999999
Q ss_pred CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
..+|+||||++||+|-.++.... .+++..++.++..|+-||..||++| +|||||||.|||||..|++||+|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999998885433 4889999999999999999999998 99999999999999999999999999
Q ss_pred ccccccCcccccccccccccccccccccc----C-CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVK----K-GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+-.+..+ ........+|||-|++||++. + +.|+...|.||+||++||||.|..||..
T Consensus 222 Clkm~~d-G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 222 CLKMDAD-GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred HHhcCCC-CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 9776543 233445679999999999985 2 5689999999999999999999999943
No 244
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=1.6e-29 Score=254.15 Aligned_cols=199 Identities=27% Similarity=0.420 Sum_probs=173.8
Q ss_pred cCCCCCCcccccCceEEEEEEeCC-CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
++|+..+.||+|+||.||++.... ++.+++|.++.... .+++.+|++++++++|||++++++.+......++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999997654 78999999876533 578899999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|.+++... ...+++.....++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 81 GAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 999999988532 345899999999999999999999987 99999999999999999999999999986543221
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......++..|+|||.+.+..++.++||||||+++|||++|+.|+...
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 155 -KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred -ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 222345788999999998888999999999999999999999998653
No 245
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=1.3e-29 Score=255.80 Aligned_cols=203 Identities=30% Similarity=0.480 Sum_probs=173.1
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.++|++.++||+|+||.||++..+++..+|||.+.... ...+++.+|+.++++++|||++++++++......+++|||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 46788999999999999999987778899999987543 33467889999999999999999999999888999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.... ...+++..+..++.+++.++.|||+++ ++|+||+|+||++++++.++|+|||++..+.....
T Consensus 84 ~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (261)
T cd05034 84 SKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY- 158 (261)
T ss_pred CCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh-
Confidence 9999999886532 235889999999999999999999987 99999999999999999999999999976543211
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
........+..|+|||.+.+..++.++|+||||++++||++ |+.||...
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 208 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM 208 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11112234568999999988889999999999999999999 99998543
No 246
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=1.1e-29 Score=255.38 Aligned_cols=201 Identities=25% Similarity=0.376 Sum_probs=172.1
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
+|++.+.||+|+||.||++.. .+++.+|+|.++.. .....+.+.+|+.+++.++|||++++.+.+..++..++++||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 477889999999999999955 46889999988643 2344567888999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++... ....+++.....++.|++.+|.+||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 999998887532 2345788999999999999999999987 9999999999999999999999999997654321
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......+++.|+|||++.+..++.++|+||||+++|+|++|+.||...
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 203 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN 203 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC
Confidence 1122346788999999998888999999999999999999999999653
No 247
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=1.1e-29 Score=255.76 Aligned_cols=195 Identities=29% Similarity=0.433 Sum_probs=162.1
Q ss_pred cccccCceEEEEEEe---CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 442 KLGEGGFGPVYKGNL---PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
.||+|+||.||+|.. .++..+|+|+++... ....+++.+|+.+++.++||||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999953 357889999987543 234567899999999999999999999885 45678999999999
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc-c
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA-N 595 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~-~ 595 (656)
+|..++.. ...+++..+..++.|++.+|.|||+.+ ++||||||.||++++++.+||+|||+++......... .
T Consensus 81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 99988843 235889999999999999999999987 9999999999999999999999999998654332211 1
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.....++..|+|||.+....++.++|+|||||++|||++ |+.||....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 203 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK 203 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 112234578999999988888999999999999999998 999997543
No 248
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=2.1e-29 Score=254.89 Aligned_cols=203 Identities=22% Similarity=0.375 Sum_probs=173.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.+.||+|++|.||+|... +++.+|+|.++.. .....+.+.+|++++++++|+|++++++.+...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999665 7899999988642 2233567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 511 EYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 511 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||+++++|..++... .....+++..+..++.+++++|.|||+.+ ++||||+|+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999887542 22345889999999999999999999987 99999999999999999999999999876543
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
... ......++..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 221 112245788899999998888999999999999999999999998543
No 249
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=1e-29 Score=262.31 Aligned_cols=201 Identities=26% Similarity=0.383 Sum_probs=167.2
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|+..+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+.+++.++||||+++++++......++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 4688899999999999999965 4678999999875432 2334677899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
++ ++|..++... ...+++..+..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||++.......
T Consensus 86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 97 5787777542 335788999999999999999999987 9999999999999999999999999997543221
Q ss_pred ccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...+
T Consensus 159 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 159 -KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred -CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11222356889999998765 457889999999999999999999996543
No 250
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=1.6e-29 Score=262.90 Aligned_cols=196 Identities=25% Similarity=0.410 Sum_probs=156.9
Q ss_pred CcccccCceEEEEEEeC---CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee--CCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP---RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE--RDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 515 (656)
++||+|+||.||+|... ++..+|+|.+..... ...+.+|+.++++++||||+++++++.. +...++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 57999999999999754 357899998875432 2456789999999999999999998854 4567899999875
Q ss_pred CChhhhhhCC------CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEE----cCCCcEEEEeccCcc
Q 006211 516 KSLDLYLFDP------IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILL----DNELNPKISDFGMAK 585 (656)
Q Consensus 516 g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl----~~~~~~kl~DfGla~ 585 (656)
+|..++... .....+++..+..++.|++.||.|||+.+ ++||||||+|||+ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 555554311 12235788999999999999999999987 9999999999999 566789999999998
Q ss_pred ccccCccc-cccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 586 LFRKDVDE-ANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 586 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
........ .......+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 66433211 12234568899999998876 45789999999999999999999998643
No 251
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=1.4e-29 Score=255.83 Aligned_cols=191 Identities=24% Similarity=0.357 Sum_probs=158.8
Q ss_pred CcccccCceEEEEEEeCC-------------CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 441 NKLGEGGFGPVYKGNLPR-------------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
+.||+|+||.||+|.... ...+++|.+..........+.+|+.++..++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 468999999999996422 2358999887665555567888999999999999999999999988999
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCc-------EEEEe
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN-------PKISD 580 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~-------~kl~D 580 (656)
++|||+++++|..++... ...+++..+..++.|+++||.|||+.+ ++||||||+|||++.++. ++++|
T Consensus 81 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 999999999998887532 335889999999999999999999987 999999999999987664 89999
Q ss_pred ccCccccccCcccccccccccccccccccccc-CCCCCccchhHHHHHHHHHHH-cCCCCCCCC
Q 006211 581 FGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQII-SSKRNARYY 642 (656)
Q Consensus 581 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~ell-tg~~p~~~~ 642 (656)
||++...... ....++..|+|||.+. ...++.++|||||||++|||+ +|+.|+...
T Consensus 156 ~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (262)
T cd05077 156 PGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK 213 (262)
T ss_pred CCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence 9998654321 1235678899999886 466899999999999999998 577777543
No 252
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=8.7e-30 Score=258.63 Aligned_cols=202 Identities=26% Similarity=0.434 Sum_probs=168.4
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC------C
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER------D 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------~ 504 (656)
+...|+..+.||+|+||.||+|.. ..++.+|+|++.... .....+.+|+.++.++ +|||++++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 456688889999999999999965 457899999987543 3345678899999998 699999999998753 3
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..++++||+++++|..++... ....+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence 578999999999999988542 2345889999999999999999999987 999999999999999999999999999
Q ss_pred cccccCcccccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
....... .......|+..|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~ 218 (272)
T cd06637 159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 218 (272)
T ss_pred eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 7653321 1223456889999999885 34578899999999999999999999854
No 253
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=3.8e-30 Score=264.79 Aligned_cols=196 Identities=28% Similarity=0.411 Sum_probs=169.0
Q ss_pred CCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCC
Q 006211 439 SANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKS 517 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 517 (656)
....||+|+||.||++.. .+++.||+|++........+.+.+|+.++..++|||++++++.+...+..++++||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 445799999999999965 4688999999876544455678899999999999999999999999999999999999999
Q ss_pred hhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccc
Q 006211 518 LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597 (656)
Q Consensus 518 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 597 (656)
|..++.. ..+++..+..++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++..+.... ....
T Consensus 105 L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~ 175 (297)
T cd06659 105 LTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRK 175 (297)
T ss_pred HHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc--cccc
Confidence 9887632 35789999999999999999999987 9999999999999999999999999987554322 1122
Q ss_pred cccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 598 ~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
...++..|+|||.+.+..++.++|||||||+++||++|+.||....
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 221 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS 221 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 3468899999999988889999999999999999999999986443
No 254
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=1.5e-29 Score=254.75 Aligned_cols=195 Identities=27% Similarity=0.443 Sum_probs=160.8
Q ss_pred cccccCceEEEEEEeC---CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCC
Q 006211 442 KLGEGGFGPVYKGNLP---RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKS 517 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 517 (656)
.||+|+||.||+|... .+..||+|++..... ...+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999543 355799999876533 33456889999999999999999999885 457899999999999
Q ss_pred hhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc-c
Q 006211 518 LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN-T 596 (656)
Q Consensus 518 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~-~ 596 (656)
|..++... ...+++..+..++.|++.+|.|||+.+ ++||||||+|||++.++.+||+|||++........... .
T Consensus 81 L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 81 LNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 99888542 345899999999999999999999987 99999999999999999999999999975543221111 1
Q ss_pred ccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 597 GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 597 ~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
....++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 202 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM 202 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence 11223568999999988889999999999999999996 99998644
No 255
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=1.4e-29 Score=255.47 Aligned_cols=203 Identities=31% Similarity=0.492 Sum_probs=171.4
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.++|++.++||+|+||.||+|...+++.+|+|.+..... ..+.+.+|+.++++++|||++++++++. .+..++++||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 467888999999999999999888889999999875433 3467889999999999999999998864 56789999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|.+++.... ...+++.++..++.|++.+|.|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 83 ENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 9999998875432 345889999999999999999999887 99999999999999999999999999976542211
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.......++..|+|||.+....++.++||||||+++|||++ |+.||....
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 11122345678999999988889999999999999999999 999986543
No 256
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=9.2e-30 Score=260.85 Aligned_cols=206 Identities=27% Similarity=0.458 Sum_probs=170.5
Q ss_pred hcCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCce
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 506 (656)
.++|+..+.||+|+||.||++... ++..+|+|++.... ......+.+|+.++++++|||++++++++......
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 356888999999999999999653 46789999987653 33446788999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCC-------------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCC
Q 006211 507 MLIYEYLPNKSLDLYLFDPI-------------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASN 567 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~N 567 (656)
++++||+++++|..++.... ....+++..++.++.|++.+|.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999885321 1234778889999999999999999987 9999999999
Q ss_pred EEEcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 568 ILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 568 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
|+++.++.++|+|||++.................+..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999875433221111222234567999999988889999999999999999997 77787543
No 257
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=2e-29 Score=255.09 Aligned_cols=206 Identities=27% Similarity=0.424 Sum_probs=175.4
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|++.+.||.|+||+||+|.. .++..+++|++.... ......+.+|++.++.++|+|++++++.+......++++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4688899999999999999964 467899999987543 23556789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++........+++.....++.|++.+|.+||+.+ ++|+||+|+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999865333346889999999999999999999987 99999999999999999999999999976654322
Q ss_pred cc--ccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EA--NTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~--~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.. ......++..|+|||.+... .++.++|+|||||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 21 22334678899999998776 78999999999999999999999996543
No 258
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=6.1e-30 Score=262.63 Aligned_cols=197 Identities=27% Similarity=0.407 Sum_probs=170.1
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
|.....||+|+||.||++.. .++..||||.+........+.+.+|+.+++.++|||++++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 44456799999999999965 46889999998766555566788999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ..+++.+...++.|++.+|.|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 104 ~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~ 174 (292)
T cd06658 104 GALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PK 174 (292)
T ss_pred CcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc--cc
Confidence 999888732 34788999999999999999999987 9999999999999999999999999987543322 12
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.||...
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 221 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 221 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22346788999999998888999999999999999999999998643
No 259
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=1.5e-29 Score=258.10 Aligned_cols=203 Identities=29% Similarity=0.460 Sum_probs=169.0
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCC----EEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQ----EFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
.+|++.+.||+|+||.||+|... +++ .+|+|.+..... ....++.+|+.++++++|||++++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46778899999999999999643 232 589998876543 345678899999999999999999999987 78899
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
|+||+++|+|..++... ...+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence 99999999999988543 234889999999999999999999976 9999999999999999999999999998664
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
............++..|+|||.+....++.++|+||||+++|||++ |+.||....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 216 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP 216 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence 3322111112233568999999988889999999999999999999 999986644
No 260
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=1.3e-29 Score=257.05 Aligned_cols=202 Identities=27% Similarity=0.488 Sum_probs=167.9
Q ss_pred CCCCCCcccccCceEEEEEEeCC-C---CEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPR-G---QEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
.|++.+.||+|+||.||+|.... + ..||||++... ......++..|+.++++++||||+++.+++..+...++|+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46788999999999999996532 3 36999998765 3444567999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++... ...+++.++..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 999999999888543 235789999999999999999999987 999999999999999999999999998765432
Q ss_pred cccccccccc---ccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 591 VDEANTGRIV---GTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~---gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.......... .+..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~ 215 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 215 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC
Confidence 2211111111 2357999999988889999999999999999986 99998543
No 261
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-31 Score=272.41 Aligned_cols=200 Identities=27% Similarity=0.416 Sum_probs=169.6
Q ss_pred CCCcccccCceEEEEEEeC--CCC--EEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 439 SANKLGEGGFGPVYKGNLP--RGQ--EFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
..++||+|+||.|++|.|. .|+ .||||+++..... ...+|++|+.+|.+|+|+|+++|+|+..+ ....+|+|.+
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 4588999999999999663 344 6899999876543 67789999999999999999999999987 6788999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
+.|+|.+.|+. ..+..+-...+..++.||+.||.||.+++ +|||||..+|+|+-..-.+||+|||+.+-+..+.+.
T Consensus 193 plGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 193 PLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred ccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 99999999977 44556777888999999999999999998 999999999999999889999999999977655443
Q ss_pred ccc-ccccccccccccccccCCCCCccchhHHHHHHHHHHHcC-CCCCCCCC
Q 006211 594 ANT-GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISS-KRNARYYG 643 (656)
Q Consensus 594 ~~~-~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg-~~p~~~~~ 643 (656)
... ....-...|+|||.++...++.+||||+|||++|||+|+ ..||-+..
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~ 320 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR 320 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCC
Confidence 322 223345689999999999999999999999999999985 55665433
No 262
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.8e-29 Score=266.58 Aligned_cols=192 Identities=22% Similarity=0.320 Sum_probs=162.4
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
...+|++.+.||+|+||.||+|... +++.||+|...... ...|+.++++++||||+++++++......++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3467999999999999999999654 56789999754332 2568999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
++. ++|..++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 138 HYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred ccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 995 577777643 2345899999999999999999999987 999999999999999999999999999743221
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
.......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 --PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1122346899999999999889999999999999999999876665
No 263
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=5.6e-31 Score=250.61 Aligned_cols=205 Identities=24% Similarity=0.392 Sum_probs=166.3
Q ss_pred hcCCCCCCcccccCceEEEEEEeC---C--CCEEEEEEccCCChh-h-HHHHHHHHHHHHhcCCCceeeEEEEEee-CCc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP---R--GQEFAVKRLSATSTQ-G-LEEFKNEVSLTARLQHVNLLRVLGYCTE-RDE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~---~--~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 505 (656)
...|+....||+|.||.||+|... + ...+|+|.++.+... . .....+|+.+++.++|||++.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 346889999999999999999322 2 237899999876321 1 2345789999999999999999998877 778
Q ss_pred eEEEEEecCCCChhhhhh--CCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC----CcEEEE
Q 006211 506 NMLIYEYLPNKSLDLYLF--DPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE----LNPKIS 579 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~--~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~----~~~kl~ 579 (656)
.++++||.+.. |...++ .......++......|+.||+.|+.|||++. |+||||||.|||+..+ |.|||+
T Consensus 103 v~l~fdYAEhD-L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEHD-LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhhh-HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence 99999999764 444442 2223346888999999999999999999999 9999999999999877 899999
Q ss_pred eccCccccccCcccc-ccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 580 DFGMAKLFRKDVDEA-NTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 580 DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
|+|+++.+....... ....++-|..|.|||.+.+ ..||.+.|||+.|||+.||+|.++-|...
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 999999886543222 3345677999999998876 56999999999999999999999888643
No 264
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=1.5e-29 Score=258.90 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=169.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|+..+.||+|++|.||++... +++.||+|++.... ....+.+.+|+.++++++|||++++++++......++|+|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999664 58899999886542 2233567899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..+... ...+++..+..++.|++.+|.|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 9999988777632 235899999999999999999999987 9999999999999999999999999998654322
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....
T Consensus 155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~ 205 (286)
T cd07847 155 D--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS 205 (286)
T ss_pred c--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 1 1223356788999998865 457889999999999999999999997544
No 265
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=1.6e-29 Score=261.30 Aligned_cols=202 Identities=20% Similarity=0.325 Sum_probs=169.7
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|+..+.||+|+||.||++.. ..++.|++|.+.... ....+.+.+|+++++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 4688899999999999999955 457899999887543 233456789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++.. ...+++.....++.++++||.|||+.+ ++||||||+||+++.++.++|+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 99999999999854 235788999999999999999999987 999999999999999999999999998642110
Q ss_pred c-------------cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 V-------------DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~-------------~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. .........++..|+|||.+....++.++|+|||||++|||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0 000111235678899999998888999999999999999999999998654
No 266
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=1.4e-29 Score=256.37 Aligned_cols=204 Identities=27% Similarity=0.472 Sum_probs=169.8
Q ss_pred cCCCCCCcccccCceEEEEEEeC-C---CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-R---GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
.+|++.+.||+|+||.||+|... + +..+|+|.++... ....+.+.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999653 2 3379999987543 33456789999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++++|..++... ...+++.+...++.|++.++.+||+.+ ++||||||+|||++.++.++|+|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 9999999999998543 235788999999999999999999987 99999999999999999999999999986543
Q ss_pred Cccccc-cccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 590 DVDEAN-TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
...... .....++..|+|||.+.+..++.++|+||||+++||+++ |+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~ 214 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMS 214 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCC
Confidence 221111 111223567999999988889999999999999999887 999986543
No 267
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.9e-29 Score=263.40 Aligned_cols=199 Identities=17% Similarity=0.251 Sum_probs=163.5
Q ss_pred CCCccccc--CceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 439 SANKLGEG--GFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 439 ~~~~iG~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
++++||+| +|++||++.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 6889999954 578999999987642 233456788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+...........
T Consensus 82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999998885422 234789999999999999999999987 999999999999999999999999865433211110
Q ss_pred -----cccccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 594 -----ANTGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 594 -----~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 01112346778999999875 4588999999999999999999999964
No 268
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=2e-29 Score=262.03 Aligned_cols=205 Identities=24% Similarity=0.309 Sum_probs=173.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|+..+.||+|++|.||++... +++.+|+|.+..... ...+.+.+|++++..++||||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999654 489999999876532 24457889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+.+++|..++... ....+++.....++.|++++|.|||+.+ ++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 999999999887532 2346899999999999999999999987 999999999999999999999999998754321
Q ss_pred ccc---------------------------cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDE---------------------------ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 110 01112367889999999998889999999999999999999999996544
No 269
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=2.4e-29 Score=256.23 Aligned_cols=200 Identities=25% Similarity=0.404 Sum_probs=171.9
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..|+..+.||.|+||.||+|.. .++..+|+|++.... ......+.+|+.++++++|||++++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 3567788999999999999965 458899999987543 34456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|.+++.. ..+++.....++.+++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 84 LGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 999999988742 35788899999999999999999987 9999999999999999999999999997654322
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......++..|+|||.+.+..++.++|+|||||++|||++|+.||....
T Consensus 156 -~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 205 (277)
T cd06640 156 -IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 205 (277)
T ss_pred -cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 11223457888999999988889999999999999999999999986543
No 270
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=1.1e-29 Score=259.97 Aligned_cols=213 Identities=24% Similarity=0.327 Sum_probs=173.0
Q ss_pred cCHHHHHHHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEe-
Q 006211 425 FSFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCT- 501 (656)
Q Consensus 425 ~~~~~~~~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~- 501 (656)
+.++.+....++|++.+.||+|+||.||++.. .+++.+|+|++..... ....+.+|+.++..+ +|||++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 33455556778999999999999999999954 4578999998865322 235678899999999 6999999999874
Q ss_pred ----eCCceEEEEEecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcE
Q 006211 502 ----ERDENMLIYEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNP 576 (656)
Q Consensus 502 ----~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~ 576 (656)
.+...++||||+++++|..++... .....+++..+..++.|++++|.|||+.+ ++||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 345689999999999998877532 22345788999999999999999999987 9999999999999999999
Q ss_pred EEEeccCccccccCccccccccccccccccccccccC-----CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 577 KISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-----GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 577 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
+|+|||+++...... .......|++.|+|||.+.. ..++.++|||||||++|||++|+.|+....
T Consensus 164 kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 164 KLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred EEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999999997654321 12223468899999998753 447889999999999999999999986543
No 271
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=2.5e-29 Score=252.11 Aligned_cols=198 Identities=29% Similarity=0.463 Sum_probs=166.7
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChh
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLD 519 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 519 (656)
++||+|++|.||++...+++.|++|.++..... ..+.+.+|++++++++||||+++++++......++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999997766999999998765433 4567899999999999999999999999999999999999999999
Q ss_pred hhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccccc
Q 006211 520 LYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRI 599 (656)
Q Consensus 520 ~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 599 (656)
.++... ...+++..+..++.+++.++.|||+++ ++||||+|+||+++.++.++|+|||++...............
T Consensus 81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 888542 235788999999999999999999987 999999999999999999999999999765322111111122
Q ss_pred cccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 600 VGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 600 ~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
..+..|+|||.+.+..++.++|+||||+++|||+| |..||....
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~ 200 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMS 200 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCC
Confidence 33567999999988889999999999999999999 788886543
No 272
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=2.2e-29 Score=257.54 Aligned_cols=200 Identities=29% Similarity=0.490 Sum_probs=167.3
Q ss_pred cCCCCCCcccccCceEEEEEEe-----CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--Cce
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-----PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DEN 506 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 506 (656)
+.|++.+.||+|+||.||++.. ..+..||+|.++... ....+.+.+|+.++++++|||++++.+++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467889999999999999963 357889999987553 33456789999999999999999999998775 567
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++||||+++++|..++... ...+++..+..++.+++.+|.|||+.+ ++||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 8999999999999988532 235789999999999999999999987 99999999999999999999999999986
Q ss_pred cccCccc-cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 587 FRKDVDE-ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 587 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
+...... .......++..|+|||.+.+..++.++|||||||++|||++++.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCC
Confidence 5432211 1122345677899999998888999999999999999999987664
No 273
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=2.2e-29 Score=255.10 Aligned_cols=203 Identities=29% Similarity=0.522 Sum_probs=168.9
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CC---CEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RG---QEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
++|+..+.||+|+||.||+|... ++ ..+++|.++... ....+.+.+|++++++++|||++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46778899999999999999654 23 379999987552 34456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++++|..++... ...+++..+..++.+++.|+.|||+.+ ++||||||+||+++.++.+||+|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 85 TEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 9999999999988542 235789999999999999999999987 99999999999999999999999999976543
Q ss_pred Ccccccc-ccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 590 DVDEANT-GRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 590 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
....... .....+..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~ 214 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM 214 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 2211111 11123457999999988889999999999999999997 99998543
No 274
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.3e-29 Score=265.45 Aligned_cols=206 Identities=28% Similarity=0.401 Sum_probs=169.2
Q ss_pred cCCCCCCcccccCceEEEEEEeC--------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP--------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD 504 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 504 (656)
.+|++.+.||+|+||.||++... ....+|+|.++... ....+++.+|+++++++ +||||+++++++....
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999531 12368999887543 33456788999999999 7999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCC-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPI-------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
..++++||+++|+|..++.... ....+++.++..++.|++.||.|||+.+ ++||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence 9999999999999999885421 1234788899999999999999999987 99999999999999
Q ss_pred CCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 572 NELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 572 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.++.+||+|||+++...............++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 241 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 241 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999976543221111222234567999999998889999999999999999998 888876543
No 275
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=2.1e-29 Score=258.86 Aligned_cols=200 Identities=27% Similarity=0.422 Sum_probs=173.2
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.+|++.+.||+|+||.||++.. .+++.+++|.+........+.+.+|+.+++.++|||++++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 5788899999999999999954 468899999987655555567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.. ..+++..+..++.+++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~- 170 (293)
T cd06647 99 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 170 (293)
T ss_pred CCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc-
Confidence 99999988843 34788899999999999999999987 99999999999999999999999999875543221
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......+++.|+|||.+....++.++|+||||+++|||++|+.||....
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~ 219 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1223467888999999988889999999999999999999999996543
No 276
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=3.7e-29 Score=251.75 Aligned_cols=202 Identities=21% Similarity=0.361 Sum_probs=170.0
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee-CCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTE-RDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 511 (656)
+|++.+.||+|++|.||++.. .+++.+|+|.+... .....+.+.+|++++++++|+|++++.+.+.. ....++++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 478889999999999999964 45788999998653 23345568899999999999999999988764 345789999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..++... ....+++.++..++.+++.++.+||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999888643 2335889999999999999999999987 9999999999999999999999999998654321
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......+++.|+|||.+.+..++.++|+||||++++||++|+.||...+
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 206 (257)
T cd08223 157 --DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD 206 (257)
T ss_pred --CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence 12223467889999999998889999999999999999999999986543
No 277
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=3e-29 Score=253.00 Aligned_cols=201 Identities=26% Similarity=0.439 Sum_probs=168.2
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.+.||+|++|.||++....+..+|+|.+.... ...+.+.+|+.++++++|||++++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4578889999999999999987777789999886543 23456889999999999999999998875 456899999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|.+++.... ...+++..+..++.+++.||.|||+.+ ++|+||+|+||++++++.++|+|||++........ .
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~-~ 158 (260)
T cd05069 84 KGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY-T 158 (260)
T ss_pred CCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc-c
Confidence 999999886432 234788999999999999999999987 99999999999999999999999999976543211 1
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
......++..|+|||.+.+..++.++|+||||+++|||++ |+.||...
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 207 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 207 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1112245678999999988889999999999999999999 88888654
No 278
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=3e-29 Score=252.39 Aligned_cols=198 Identities=29% Similarity=0.442 Sum_probs=170.5
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC-----hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS-----TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
+|+..+.||+|++|.||+|... +++.|++|.+.... .+..+.+.+|+.+++.++|||++++.+++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999665 78999999886543 23456788999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
+||+++++|..++.. ...+++.....++.|+++++.|||+.+ ++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 999999999998853 234788999999999999999999987 99999999999999999999999999876543
Q ss_pred CccccccccccccccccccccccCCC-CCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||...
T Consensus 155 ~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~ 205 (258)
T cd06632 155 FS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQL 205 (258)
T ss_pred cc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccC
Confidence 22 122346788999999987766 899999999999999999999998554
No 279
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.3e-30 Score=261.30 Aligned_cols=202 Identities=24% Similarity=0.367 Sum_probs=172.3
Q ss_pred HhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccC--CChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSA--TSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 509 (656)
....|+++++||+|+-+.||++...+.+.+|+|++.. .+.+....+.+|+..|.+|+ |.+|+++++|-..++.+|+|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 3567899999999999999999887888899887643 35666778999999999995 99999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||+- +.+|..+|...... ...| .++.+..|+++++.++|..+ |||.||||.|+|+-.+ .+||+|||+|..+..
T Consensus 439 mE~G-d~DL~kiL~k~~~~-~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVkG-~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKKKSI-DPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVKG-RLKLIDFGIANAIQP 511 (677)
T ss_pred eecc-cccHHHHHHhccCC-CchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEee-eEEeeeechhcccCc
Confidence 9985 56888888654332 2223 77889999999999999987 9999999999999876 799999999998887
Q ss_pred CccccccccccccccccccccccCCC-----------CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGI-----------YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+.........+||+.||+||.+.... .+.+|||||||||||+|+.|++||..
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~ 574 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ 574 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH
Confidence 77766677789999999999885322 56789999999999999999999954
No 280
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-30 Score=256.87 Aligned_cols=205 Identities=26% Similarity=0.342 Sum_probs=170.3
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 508 (656)
..+|..+.+||+|+||.|-++.. .+.+.+|||++++.- ....+--..|-++|... +-|.++++..+++.-+.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 34677889999999999999954 456789999998752 22233334566666655 57899999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
||||+.||+|--.+.. -..+.+..+..++.+|+-||-+||+.+ ||.||||..|||++.+|++||+|||+++.-.
T Consensus 428 VMEyvnGGDLMyhiQQ---~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQ---VGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEEecCchhhhHHHH---hcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccc
Confidence 9999999999655533 234677888999999999999999998 9999999999999999999999999997422
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCcc
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~ 646 (656)
.....+.+.+||+.|+|||++...+|+.++|.||+||+||||+.|++||++.+.++
T Consensus 502 --~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e 557 (683)
T KOG0696|consen 502 --FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE 557 (683)
T ss_pred --cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 23445566899999999999999999999999999999999999999998755443
No 281
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=1.1e-29 Score=258.71 Aligned_cols=197 Identities=26% Similarity=0.425 Sum_probs=169.1
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++++++||||+++++.+......++|+||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 355668899999999999954 457889999987543 344567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++. ...+++.....++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||++..+....
T Consensus 85 ~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06642 85 GGGSALDLLK----PGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence 9999988873 245788999999999999999999987 9999999999999999999999999997654321
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.......++..|+|||.+.+..++.++|+|||||++|||++|+.|+..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 112224578899999999988899999999999999999999999864
No 282
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.96 E-value=2.8e-29 Score=255.26 Aligned_cols=191 Identities=25% Similarity=0.354 Sum_probs=157.6
Q ss_pred cccccCceEEEEEEeCC-------------------------CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeE
Q 006211 442 KLGEGGFGPVYKGNLPR-------------------------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRV 496 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 496 (656)
.||+|+||.||+|.... ...|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999985311 13589999876555555678889999999999999999
Q ss_pred EEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC--
Q 006211 497 LGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-- 574 (656)
Q Consensus 497 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-- 574 (656)
++++......++||||+++++|..++... ...+++..+..++.|+++||.|||+.+ ++||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 99999999999999999999998888542 335788999999999999999999987 99999999999998653
Q ss_pred -----cEEEEeccCccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHH-HcCCCCCCCCC
Q 006211 575 -----NPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQI-ISSKRNARYYG 643 (656)
Q Consensus 575 -----~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~el-ltg~~p~~~~~ 643 (656)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++||| ++|+.||....
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 3799999988643221 12246778999998865 5689999999999999998 47898886544
No 283
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=4.1e-29 Score=251.35 Aligned_cols=198 Identities=33% Similarity=0.513 Sum_probs=171.1
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.++|++.+.||.|+||.||++.. .++.||+|.+..... ..+++.+|+.+++.++|+|++++++++......++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY-RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe-cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 35678889999999999999976 478999999977644 4567899999999999999999999999889999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.... ...+++.....++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 9999999885432 225899999999999999999999987 99999999999999999999999999986532211
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
....+..|+|||.+....++.++|+||||++++||++ |+.||...
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 203 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 1234567999999988889999999999999999997 88888544
No 284
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.96 E-value=1.6e-29 Score=261.01 Aligned_cols=202 Identities=29% Similarity=0.498 Sum_probs=166.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCC----EEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQ----EFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
++|+..+.||+|+||.||+|.. .++. .+|+|.+..... ....++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 4677889999999999999964 3343 578998875432 3334688999999999999999999998754 5678
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
++||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 99999999999888542 234788999999999999999999987 9999999999999999999999999998654
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
............++..|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~ 215 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 215 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 3322222222345678999999988889999999999999999997 88998653
No 285
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=7.8e-30 Score=249.62 Aligned_cols=213 Identities=24% Similarity=0.309 Sum_probs=174.7
Q ss_pred HHHHHHHhcCCCCCCcccccCceEEEEEEe------CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEE
Q 006211 427 FSDIKAATNNFSSANKLGEGGFGPVYKGNL------PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGY 499 (656)
Q Consensus 427 ~~~~~~~~~~y~~~~~iG~G~~g~V~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 499 (656)
..++.....+++....+-+|.||.||+|-+ .+.+.|-+|.++.. +.-....++.|...+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 445555667788889999999999999943 33456778877654 33456678899999999999999999998
Q ss_pred Eee-CCceEEEEEecCCCChhhhhh-----CCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC
Q 006211 500 CTE-RDENMLIYEYLPNKSLDLYLF-----DPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE 573 (656)
Q Consensus 500 ~~~-~~~~~lv~e~~~~g~L~~~l~-----~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~ 573 (656)
+.+ ....++++.++.-|+|..++. +......++..+...++.|++.|++|||..+ +||.||..+|++|++.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 865 456788999999999999997 4445566888899999999999999999987 9999999999999999
Q ss_pred CcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 574 LNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 574 ~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.++||+|-.+++.+-+.+.......--.+..||+||.+.+..|+..+|||||||++|||+| |+.|+..-
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 9999999999997655444333223345678999999999999999999999999999998 56666443
No 286
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1.8e-29 Score=258.17 Aligned_cols=200 Identities=25% Similarity=0.384 Sum_probs=171.5
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|++.+.||+|+||+||++.. .+++.+|+|++.... ....+.+.+|+++++.++||||+++++.+......++|+||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 4677889999999999999965 468899999876543 33456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++.. ...+++..+..++.+++.+|.|||+.+ +++||||+|+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~-- 157 (284)
T cd06620 85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS-- 157 (284)
T ss_pred CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh--
Confidence 999999888743 235889999999999999999999753 3999999999999999999999999998654321
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+.+..++.++|+|||||++|||++|+.||....
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~ 206 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN 206 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 1123468899999999988889999999999999999999999997543
No 287
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=2.7e-29 Score=254.39 Aligned_cols=201 Identities=27% Similarity=0.469 Sum_probs=170.5
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC------hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS------TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 508 (656)
+|+..+.||+|++|.||++.. .+++.+|+|+++... ....+.+.+|+.++++++|+|++++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999954 568899999987543 1234578899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEeccCcccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDFGMAKLF 587 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfGla~~~ 587 (656)
|+||+++++|..++.. ...+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++ .++|+|||++...
T Consensus 81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 9999999999988853 235788999999999999999999987 99999999999998776 5999999999766
Q ss_pred ccCccc--cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 588 RKDVDE--ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 588 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...... .......++..|+|||.+.+..++.++|+||||+++++|++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 211 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAE 211 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 432111 1122346788999999998888999999999999999999999998643
No 288
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96 E-value=3.7e-29 Score=252.30 Aligned_cols=203 Identities=26% Similarity=0.445 Sum_probs=170.9
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.++|++.+.||+|+||.||++....+..+++|.+... ....+.+.+|++++++++|+|++++.+.+.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4578889999999999999998777888999988754 2345678899999999999999999999877 7789999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|.+++.... ...+++..+..++.+++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||.+..+.....
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 83 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 9999999885432 335788899999999999999999987 99999999999999999999999999976543211
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.......++..|+|||.+....++.++|+|||||++|++++ |+.||....
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~ 208 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 208 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC
Confidence 11122245677999999988889999999999999999999 888886543
No 289
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.9e-30 Score=241.69 Aligned_cols=198 Identities=24% Similarity=0.400 Sum_probs=164.1
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.+.+..||.|+.|.|+++.. ..|...|||.+... ..++.+++++.+.++..- ..|.||+.+|+|......++.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 34457799999999999965 45889999998765 445667888888887765 4899999999999998899999988
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
...++.++.. ...++++.-+-++...+.+||.||.++| +|+|||+||+|||+|+.|++||||||++..+..+.
T Consensus 174 -s~C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-- 246 (391)
T KOG0983|consen 174 -STCAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-- 246 (391)
T ss_pred -HHHHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc--
Confidence 3455555543 2345888888899999999999999998 69999999999999999999999999998765432
Q ss_pred cccccccccccccccccccC---CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKK---GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~---~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..+...|.+.|||||.+.- ..|+.++||||||+.++||.||+-||..-
T Consensus 247 -AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c 297 (391)
T KOG0983|consen 247 -AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGC 297 (391)
T ss_pred -ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCC
Confidence 2334478899999999854 35888999999999999999999999763
No 290
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=4.3e-29 Score=254.01 Aligned_cols=203 Identities=26% Similarity=0.409 Sum_probs=170.1
Q ss_pred cCCCCCCcccccCceEEEEEEeC------CCCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP------RGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 507 (656)
++|+..+.||+|+||.||+|... ..+.+++|.+.....+ ..+.+.+|++++++++|||++++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999653 3467999988765443 4567899999999999999999999999989999
Q ss_pred EEEEecCCCChhhhhhCCCcC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEec
Q 006211 508 LIYEYLPNKSLDLYLFDPIRR------YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDF 581 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~Df 581 (656)
+||||+++++|..++...... ..+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998643321 25899999999999999999999987 999999999999999999999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCC
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARY 641 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~ 641 (656)
|++...... .........++..|+|||.+.+...+.++||||||+++|||++ |..||..
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~ 221 (275)
T cd05046 162 SLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG 221 (275)
T ss_pred ccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 998644321 1112223356778999999888888999999999999999999 7778754
No 291
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=4.7e-29 Score=253.33 Aligned_cols=200 Identities=29% Similarity=0.454 Sum_probs=167.7
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh----------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST----------QGLEEFKNEVSLTARLQHVNLLRVLGYCTERD 504 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 504 (656)
+|...+.||+|++|.||+|.. .+++.+|+|.++.... ...+.+.+|+.+++.++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 466788999999999999954 4688999998764211 11346788999999999999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..++|+||+++++|..++... ..+++..+..++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999888543 45888999999999999999999987 999999999999999999999999999
Q ss_pred cccccCccccccccccccccccccccccCCC--CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKGI--YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+...............++..|+|||.+.... ++.++|+||||+++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 7643322222223346788999999887654 78999999999999999999999853
No 292
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=5.4e-29 Score=251.74 Aligned_cols=202 Identities=26% Similarity=0.403 Sum_probs=168.8
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-----ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--Cce
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-----STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DEN 506 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 506 (656)
.+|++.+.||+|+||.||++.. .+++.+|+|++... ..+....+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999964 46889999987532 223445788999999999999999999988664 457
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++++||+++++|..++.. ...+++.....++.|++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 899999999999888743 234788899999999999999999987 99999999999999999999999999986
Q ss_pred cccCcc-ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDVD-EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...... ........++..|+|||.+.+..++.++|+|||||+++||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 532111 11112345788999999998888899999999999999999999998643
No 293
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.96 E-value=6e-29 Score=252.28 Aligned_cols=196 Identities=29% Similarity=0.467 Sum_probs=161.1
Q ss_pred CcccccCceEEEEEEeCC-CC--EEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLPR-GQ--EFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|...+ +. .+++|.++... ....+.+.+|++++.++ +||||+++++++......+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999997643 33 46888887542 34456788999999999 799999999999999999999999999
Q ss_pred CChhhhhhCCC-------------cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 516 KSLDLYLFDPI-------------RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 516 g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
++|..++.... ....+++.....++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999885422 1224788999999999999999999987 9999999999999999999999999
Q ss_pred CccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
++...... ........+..|+|||.+....++.++|+|||||++|||++ |+.||...
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~ 215 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 215 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 98632211 11111223567999999988889999999999999999997 99998543
No 294
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=227.01 Aligned_cols=196 Identities=26% Similarity=0.409 Sum_probs=164.3
Q ss_pred CCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|...++||+|.||+||+++ ..+++.||+|+++.... .-....++|+.+++.++|.|||++++....+....+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667899999999999994 55688999999876532 2234578999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
|. -+|..+.-. -+..++.+.+..++.|+++||.+.|+.+ +.|||+||+|.||+.+|++|++|||+++-+.-..
T Consensus 83 cd-qdlkkyfds--lng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv- 155 (292)
T KOG0662|consen 83 CD-QDLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV- 155 (292)
T ss_pred hh-HHHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence 95 467666532 2345889999999999999999999988 9999999999999999999999999999765432
Q ss_pred ccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~ 639 (656)
...+..+-|..|.+|+++.+. .|+.+.|+||.||++.|+....+|.
T Consensus 156 -rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrpl 202 (292)
T KOG0662|consen 156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_pred -EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence 233334668999999988764 5899999999999999999877775
No 295
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=3.7e-29 Score=251.98 Aligned_cols=189 Identities=26% Similarity=0.448 Sum_probs=158.0
Q ss_pred CcccccCceEEEEEEeCCCC-----------EEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 441 NKLGEGGFGPVYKGNLPRGQ-----------EFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
+.||+|+||.||+|...... .+++|.+...... ...+.+|+.+++.++|||++++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999664332 5788877654333 5678899999999999999999999988 778999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-------cEEEEecc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-------NPKISDFG 582 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-------~~kl~DfG 582 (656)
+||+++++|..++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++ .+||+|||
T Consensus 79 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 79 EEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence 99999999999885432 25889999999999999999999987 99999999999999887 79999999
Q ss_pred CccccccCccccccccccccccccccccccCC--CCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG--IYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
++..... .....++..|+|||.+... .++.++|||||||++|||++ |..|+...
T Consensus 154 ~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~ 210 (259)
T cd05037 154 IPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTL 210 (259)
T ss_pred ccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccC
Confidence 9976432 1123456789999998776 78999999999999999999 46666544
No 296
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=3.5e-29 Score=256.94 Aligned_cols=201 Identities=24% Similarity=0.364 Sum_probs=165.1
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.++|.+.+.||+|+||.||+|.. .+++.+++|++..... .....+.+|+.+++.++|+||+++.+++......++|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 46788999999999999999954 4688999999865432 223356789999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+. +++..++... ...+++..+..++.|+++||.|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 84 YMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred ccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 996 5665555332 234678888899999999999999987 9999999999999999999999999997543221
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 158 Q--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred C--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 1 1122356889999998865 34788999999999999999999999643
No 297
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-31 Score=293.52 Aligned_cols=205 Identities=28% Similarity=0.414 Sum_probs=173.4
Q ss_pred hcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
+-+++....||.|.||.||.| ...+|...|+|.+.... ......+.+|+.++..++|||+|+.+|+-..++..+|.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 456777889999999999999 66779999999876543 233456789999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
|||++|+|.+.+. ....+++.....+..|++.|+.|||+.| ||||||||.||+++.+|.+|++|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999999883 3334677777889999999999999988 999999999999999999999999999887654
Q ss_pred ccc--cccccccccccccccccccCC---CCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 591 VDE--ANTGRIVGTYGYVPPEYVKKG---IYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 591 ~~~--~~~~~~~gt~~y~aPE~~~~~---~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
... ..-....||+-|||||++.+. ....++||||||||+.||+||++||...+.
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence 321 122346899999999998653 345689999999999999999999976554
No 298
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-31 Score=248.92 Aligned_cols=200 Identities=25% Similarity=0.400 Sum_probs=162.6
Q ss_pred CCCcccccCceEEEEE-EeCCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 439 SANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATST-QGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
-+..||.|+||+|++- ..+.|+..|||+++.... .+.++++.|.+...+- +.||||+++|.+..++..|+.||.| .
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-D 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-h
Confidence 3578999999999998 456799999999987643 4556788888765554 7999999999999999999999999 4
Q ss_pred CChhhhhhC--CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 516 KSLDLYLFD--PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 516 g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
.+++.+... ...+..++++-.-.|......||.||.+.. .|||||+||+|||++..|.+||||||++..+..+..
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA- 223 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA- 223 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHHH-
Confidence 577654321 123456888888889999999999998765 599999999999999999999999999987654322
Q ss_pred cccccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
.+.-.|...|||||.+.. ..|+.+|||||||++|+|+.||+.|++.+.+
T Consensus 224 --kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s 274 (361)
T KOG1006|consen 224 --KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS 274 (361)
T ss_pred --hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH
Confidence 223367788999999854 3488999999999999999999999987653
No 299
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=1.9e-29 Score=255.66 Aligned_cols=200 Identities=31% Similarity=0.487 Sum_probs=165.1
Q ss_pred CcccccCceEEEEEEeCC-------CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 441 NKLGEGGFGPVYKGNLPR-------GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+.||+|+||.||+|...+ +..+++|.+.... ......+.+|+.+++.++||||+++++++......+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999996532 2578999886543 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCC----cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-----cEEEEeccC
Q 006211 513 LPNKSLDLYLFDPI----RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-----NPKISDFGM 583 (656)
Q Consensus 513 ~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-----~~kl~DfGl 583 (656)
+++++|..++.... ....+++.+++.++.|++.+|.|||+.+ ++|+||+|+||+++.+. .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999886422 2234788999999999999999999887 99999999999999887 899999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~ 218 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALN 218 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccC
Confidence 976543222222223345678999999998889999999999999999998 999986543
No 300
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=7.6e-29 Score=250.34 Aligned_cols=201 Identities=26% Similarity=0.409 Sum_probs=175.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|++.+.||+|++|.||++... +++.+++|++..... ...+.+.+|+..+.+++|+|++++++++......++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888999999999999999665 589999999877644 4456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
+++++|..++... ..+++.....++.|+++++.|||+ .+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999998543 468999999999999999999999 87 9999999999999999999999999998654322
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.. .....++..|+|||.+....++.++|+||||+++|||++|+.|+...+
T Consensus 155 ~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 155 DQ--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred Cc--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 21 123467889999999998889999999999999999999999996654
No 301
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=5.1e-29 Score=250.72 Aligned_cols=196 Identities=30% Similarity=0.454 Sum_probs=165.6
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEe-eCCceEEEEEec
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCT-ERDENMLIYEYL 513 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 513 (656)
++|++.+.||+|+||.||++.. .+..+++|.++... ..+.+.+|+.++++++|+|++++++++. .....++++||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 4678889999999999999976 47889999886543 2456889999999999999999999764 456789999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++.... ...+++..+..++.+++.+|.|||+.+ ++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 83 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 9999999886432 234788999999999999999999987 9999999999999999999999999987543221
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
.....+..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 157 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~ 203 (256)
T cd05082 157 ---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred ---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 12234567999999988889999999999999999997 88888643
No 302
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=3.7e-30 Score=267.47 Aligned_cols=193 Identities=31% Similarity=0.474 Sum_probs=162.8
Q ss_pred CCcccccCceEEEEE-EeCCCCEEE---EEEccC-CChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc--eEEEEEe
Q 006211 440 ANKLGEGGFGPVYKG-NLPRGQEFA---VKRLSA-TSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE--NMLIYEY 512 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~-~~~~~~~va---vK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 512 (656)
..+||+|+|-+||+| +..+|-.|| ||.-+. ..++..++|..|+.+|+.|+||||++++..+.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 468999999999999 444577776 332222 234556889999999999999999999999877665 6789999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl~DfGla~~~~~~~ 591 (656)
+..|+|..|+.... .++......+++||++||.|||+.. ++|||||||..||+|+. -|.|||+|+|||......
T Consensus 125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 99999999986533 4778899999999999999999976 68999999999999985 489999999999986543
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.....+|||.|||||+.. ..|+..+||||||++++||.|+.-|+..
T Consensus 200 ---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsE 245 (632)
T KOG0584|consen 200 ---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSE 245 (632)
T ss_pred ---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhh
Confidence 223468999999999887 7899999999999999999999999854
No 303
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=4e-29 Score=256.46 Aligned_cols=201 Identities=26% Similarity=0.384 Sum_probs=166.5
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56888899999999999999654 688999999865432 2224567899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++ +|..++.... ..+++.....++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 985 8888775432 35789999999999999999999987 99999999999999999999999999875322111
Q ss_pred ccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||....
T Consensus 159 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 159 --TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred --cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 1112246788999998765 457899999999999999999999996443
No 304
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.96 E-value=5.5e-29 Score=252.55 Aligned_cols=202 Identities=23% Similarity=0.387 Sum_probs=167.5
Q ss_pred cCCCCCCcccccCceEEEEEEeCC----CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR----GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
++|.+.+.||+|+||.||+|...+ ...++||...... .+..+.+.+|+.++++++|||++++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999996533 3468999887654 4455678999999999999999999998875 557899
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+++++|.+++... ...+++..+..++.+++.+|.|||+.+ ++||||||+||+++.++.++|+|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 85 MELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 9999999999998543 234789999999999999999999987 99999999999999999999999999976543
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.... ......++..|+|||.+....++.++||||||++++||++ |+.||....
T Consensus 160 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~ 213 (270)
T cd05056 160 ESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK 213 (270)
T ss_pred ccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 3111 1112234568999999988889999999999999999996 999986543
No 305
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=6.1e-29 Score=253.16 Aligned_cols=199 Identities=27% Similarity=0.456 Sum_probs=170.0
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcC---CCceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQ---HVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 510 (656)
.|+..+.||+|+||.||+|.. .+++.+++|+++.. ......++.+|+.++++++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477789999999999999964 56889999998754 2344567888999999986 999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++.. ..+++.....++.+++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 99999999988743 36889999999999999999999987 999999999999999999999999999866443
Q ss_pred ccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. .......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||....
T Consensus 155 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~ 206 (277)
T cd06917 155 S--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD 206 (277)
T ss_pred c--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 12223468889999998765 446889999999999999999999996543
No 306
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=4.2e-29 Score=259.45 Aligned_cols=205 Identities=24% Similarity=0.381 Sum_probs=167.0
Q ss_pred CCCCCCcccccCceEEEEEEeC---CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP---RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENM 507 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 507 (656)
+|++.+.||+|++|.||+|... .++.||+|.+.... ....+.+.+|+.++.+++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999654 47899999987743 33345678899999999999999999999888 7899
Q ss_pred EEEEecCCCChhhhhhCCC-c-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC----CCcEEEEec
Q 006211 508 LIYEYLPNKSLDLYLFDPI-R-RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN----ELNPKISDF 581 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~-~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~----~~~~kl~Df 581 (656)
+|+||+++ ++..++.... . ...+++.....++.|++.+|.|||+.+ ++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999976 5555543221 1 236889999999999999999999987 999999999999999 899999999
Q ss_pred cCccccccCcc-ccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 582 GMAKLFRKDVD-EANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 582 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
|++........ ........++..|+|||.+.+ ..++.++|||||||+++||++|+.||.....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~ 221 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA 221 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence 99986543222 112223467889999998765 4578999999999999999999999975543
No 307
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=7.1e-29 Score=249.78 Aligned_cols=196 Identities=33% Similarity=0.479 Sum_probs=162.1
Q ss_pred CcccccCceEEEEEEeC-C---CCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLP-R---GQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
++||+|+||.||+|... . +..+|+|.+..... ...+++.+|+.+++.++|||++++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999542 2 26899999876543 24457889999999999999999999876 4567999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++... ..+++..+..++.|++.+|.|||..+ ++|+||||+|||++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 9999998543 25889999999999999999999987 99999999999999999999999999986543322111
Q ss_pred -cccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 596 -TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 596 -~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.....++..|+|||.+....++.++||||||+++|||++ |+.||....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~ 203 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK 203 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC
Confidence 111223467999999988889999999999999999998 999986543
No 308
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=5.7e-29 Score=254.52 Aligned_cols=199 Identities=23% Similarity=0.360 Sum_probs=169.4
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|++.+.||+|++|.||+|.. .+++.|++|++.... ....+.+.+|+.++++++|||++++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477889999999999999965 468899999987653 23346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+ +++|..++.... ..+++.++..++.|++++|.|||+.+ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999998875432 45899999999999999999999987 99999999999999999999999999986543321
Q ss_pred ccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.......++..|+|||.+.+. .++.++|||||||+++||++|++||..
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 122334688899999987654 468899999999999999999877754
No 309
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.96 E-value=7.5e-29 Score=249.37 Aligned_cols=201 Identities=29% Similarity=0.479 Sum_probs=169.6
Q ss_pred CCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+|+..+.||+|+||.||++...++..+|+|.+..... ....+.+|++++++++|||++++++++......++++||+++
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 5677899999999999999877788999998875432 235688999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++... ...+++..+..++.+++.++.+||+.+ ++|+||+|+||+++.++.++|+|||++......... .
T Consensus 84 ~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~ 157 (256)
T cd05112 84 GCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-S 157 (256)
T ss_pred CcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCccc-c
Confidence 9999888542 234788999999999999999999987 999999999999999999999999998754322111 1
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 206 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS 206 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 112234568999999988889999999999999999998 899886543
No 310
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=5.4e-29 Score=252.36 Aligned_cols=198 Identities=23% Similarity=0.341 Sum_probs=156.6
Q ss_pred CcccccCceEEEEEEeCCC---CEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 441 NKLGEGGFGPVYKGNLPRG---QEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.||+|+||.||++...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.|......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3699999999999964333 356677766543 334567899999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 517 SLDLYLFDPIR-RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 517 ~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
+|..++..... ....++.....++.|+++||.|||+.+ ++||||||+|||++.++.++|+|||++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99998864322 234566778899999999999999987 99999999999999999999999999864322111112
Q ss_pred cccccccccccccccccC-------CCCCccchhHHHHHHHHHHHcC-CCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKK-------GIYSMKYDVYSFGVLLLQIISS-KRNARY 641 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~-------~~~s~~sDvwslGvil~elltg-~~p~~~ 641 (656)
.....++..|+|||++.. ..++.++|||||||++|||+++ ..||..
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 211 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSH 211 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Confidence 223467889999998743 2357899999999999999975 556643
No 311
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=257.76 Aligned_cols=206 Identities=31% Similarity=0.460 Sum_probs=170.5
Q ss_pred HHhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCC-------hhhHHHHHHHHHHHHhcCCCceeeEEEEEe-e
Q 006211 432 AATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATS-------TQGLEEFKNEVSLTARLQHVNLLRVLGYCT-E 502 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~ 502 (656)
...++|-++..||+|+|++||++ ++...+.||||+-.... +...+...+|..|-+.|+||.||++++++. +
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34567788899999999999999 66678889999754321 111234678999999999999999999985 4
Q ss_pred CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC---CcEEEE
Q 006211 503 RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE---LNPKIS 579 (656)
Q Consensus 503 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~---~~~kl~ 579 (656)
.+..|-|+|||+|.+|+-||.. ...+++.+++.|+.||+.+|.||.+.. ++|||-||||.|||+.+. |.+||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEee
Confidence 5677899999999999999853 345899999999999999999999985 579999999999999654 789999
Q ss_pred eccCccccccCccc-----cccccccccccccccccccCC----CCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 580 DFGMAKLFRKDVDE-----ANTGRIVGTYGYVPPEYVKKG----IYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 580 DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
|||+++.+..+... ..++...||..|++||.+.-+ .++.|+||||+|||+|..+.|++||.-
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGh 686 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGH 686 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCC
Confidence 99999988654333 224456799999999987432 378999999999999999999999964
No 312
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.2e-29 Score=275.29 Aligned_cols=203 Identities=24% Similarity=0.351 Sum_probs=158.0
Q ss_pred HHhcCCCCCCcccccCceEEEEEEeCC--CCEEEEE------------------EccCCChhhHHHHHHHHHHHHhcCCC
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNLPR--GQEFAVK------------------RLSATSTQGLEEFKNEVSLTARLQHV 491 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~ 491 (656)
...++|++.+.||+|+||+||++.... +...++| .+.. .......+.+|+.++.+++||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCC
Confidence 456789999999999999999985422 2222222 1111 122345678999999999999
Q ss_pred ceeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEE
Q 006211 492 NLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIR--RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNIL 569 (656)
Q Consensus 492 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NIL 569 (656)
||+++++++...+..+++++++. ++|..++..... ...........++.|++.||.|||+.+ |+||||||+|||
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NIL 299 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIF 299 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEE
Confidence 99999999999999999999985 455555533211 112345667789999999999999987 999999999999
Q ss_pred EcCCCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 570 LDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 570 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|+.++.
T Consensus 300 l~~~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 300 LNCDGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred ECCCCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999987643221 12223578999999999999899999999999999999999986543
No 313
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.2e-29 Score=261.34 Aligned_cols=213 Identities=23% Similarity=0.362 Sum_probs=176.0
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
.-|..++.||-|+||+|.+++. .+...+|+|.+++.+ ......++.|-.||..-+.+=||+|+-.|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 3466678899999999999954 456789999997753 233456788999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc-
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK- 589 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~- 589 (656)
+|++||++-.+|. +-..+.+..++.++.++.+++++.|.++ +|||||||.|||||.+|++||+|||||.-+.-
T Consensus 709 dYIPGGDmMSLLI---rmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLI---RMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHH---HhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999988873 4556788888999999999999999998 99999999999999999999999999964320
Q ss_pred --------Ccc-------------------------------ccccccccccccccccccccCCCCCccchhHHHHHHHH
Q 006211 590 --------DVD-------------------------------EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLL 630 (656)
Q Consensus 590 --------~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ 630 (656)
... .......+||+.|+|||++....++...|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 000 00012357999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCccc-cccccc
Q 006211 631 QIISSKRNARYYGTSEN-LNFLEY 653 (656)
Q Consensus 631 elltg~~p~~~~~~~~~-~~~~~~ 653 (656)
||+.|+.||-....-+. ...++|
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw 886 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINW 886 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeeh
Confidence 99999999976665443 344444
No 314
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=3.1e-29 Score=256.52 Aligned_cols=199 Identities=22% Similarity=0.338 Sum_probs=168.2
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|+..+.||+|+||.||+|... +++.+|+|++..... ...+.+.+|+++++.++||||+++++++......++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999764 588999999865422 234567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..+... ...+++.....++.|++++|.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 9999988876632 234889999999999999999999987 9999999999999999999999999997654322
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.......++..|+|||.+.+ ..++.++||||||+++|||++|++||..
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 155 --EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred --cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 12223457889999998865 4468899999999999999999988854
No 315
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=1.3e-28 Score=250.83 Aligned_cols=198 Identities=26% Similarity=0.414 Sum_probs=170.1
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
-|+..+.||+|+||.||+|.. .++..+|+|.+.... ......+.+|+.++++++|||++++++++......++|+||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467788999999999999954 468899999886543 334457889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++++|..++. ...+++.....++.+++.++.+||+.+ ++|+||+|+||+++.++.++|+|||++..+....
T Consensus 85 ~~~~l~~~i~----~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 85 GGGSALDLLE----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 9999998874 235789999999999999999999987 9999999999999999999999999987654321
Q ss_pred cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......++..|+|||.+....++.++|+|||||++|+|++|+.|+...
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 204 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSEL 204 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence 1122345788899999998888899999999999999999999998643
No 316
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=5.4e-29 Score=255.56 Aligned_cols=211 Identities=26% Similarity=0.344 Sum_probs=172.0
Q ss_pred CHHHHHHHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC
Q 006211 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER 503 (656)
Q Consensus 426 ~~~~~~~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 503 (656)
...++....++|++.+.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.++.++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 3344555678899999999999999999965 468899999986542 2235677899999998 899999999998754
Q ss_pred -----CceEEEEEecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEE
Q 006211 504 -----DENMLIYEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPK 577 (656)
Q Consensus 504 -----~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~k 577 (656)
...++|+||+++++|..++... .....+++..+..++.|++.+|.|||+.+ ++||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEE
Confidence 3579999999999998887532 22345889999999999999999999987 99999999999999999999
Q ss_pred EEeccCccccccCccccccccccccccccccccccCC-----CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 578 ISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG-----IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 578 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
|+|||++........ ......++..|+|||.+... .++.++|+|||||++|||++|+.||...
T Consensus 169 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 169 LVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred Eeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 999999876543221 12234678899999987543 2688999999999999999999998654
No 317
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=1.7e-29 Score=254.40 Aligned_cols=199 Identities=27% Similarity=0.358 Sum_probs=173.1
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
+|++.+.||.|+||.||++... +++.+|+|.+.... ....+.+.+|++++++++||||+++++.+......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999664 58899999987542 2345678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|..++... ..+++..+..++.+++++|.|||+++ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999888432 46889999999999999999999987 9999999999999999999999999987654321
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+....++.++|+||||+++|+|++|+.||....
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 155 ---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred ---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 1223457788999999988889999999999999999999999997654
No 318
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=8.2e-29 Score=253.16 Aligned_cols=202 Identities=28% Similarity=0.446 Sum_probs=169.1
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
+|+..+.||.|++|.||+|... ++..||||+++.... ...+.+.+|+.++++++|||++++++++...+..++|+||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999664 688999999876532 23456778999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++ +|..++........+++..+..++.|++++|.|||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 85 77777755444456899999999999999999999987 99999999999999999999999999975533211
Q ss_pred cccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|++||.+.+. .++.++|+|||||++|||++|+.||....
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~ 205 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN 205 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223567889999987653 46889999999999999999999987544
No 319
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=6.9e-29 Score=253.53 Aligned_cols=210 Identities=25% Similarity=0.417 Sum_probs=171.6
Q ss_pred CHHHHHHHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEee-
Q 006211 426 SFSDIKAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTE- 502 (656)
Q Consensus 426 ~~~~~~~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~- 502 (656)
++.++......|++.+.||.|+||.||+|.. ..++.+|+|++.... ....++..|+.++.++ +|||++++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 3445555667889999999999999999965 568899999986643 3345678899999998 69999999998853
Q ss_pred -----CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEE
Q 006211 503 -----RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPK 577 (656)
Q Consensus 503 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~k 577 (656)
....+++|||+++|+|..++... ....+++..+..++.|++.+|.|||+.+ ++|+||+|+||++++++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEE
Confidence 45679999999999999887542 2345788889999999999999999987 99999999999999999999
Q ss_pred EEeccCccccccCcccccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 578 ISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 578 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
|+|||++....... .......++..|+|||.+. ...++.++|+|||||++|||++|+.||...
T Consensus 162 l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 162 LVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred EeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence 99999987543221 1222346888999999875 345788999999999999999999999543
No 320
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=1.1e-28 Score=249.37 Aligned_cols=201 Identities=27% Similarity=0.461 Sum_probs=171.9
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|+||.||++.. .+++.+++|.++.... ...+.+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 477889999999999999965 4688999999876543 3567889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|.+++.. ...+++..+..++.+++++|.|||+.+ ++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 999999998854 234788899999999999999999987 99999999999999999999999999976543222
Q ss_pred ccc--cccccccccccccccccCCC---CCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EAN--TGRIVGTYGYVPPEYVKKGI---YSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~--~~~~~gt~~y~aPE~~~~~~---~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
... .....++..|+|||.+.... ++.++||||||++++||++|+.||...
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 111 11245778999999987766 889999999999999999999999643
No 321
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=1.2e-28 Score=252.19 Aligned_cols=197 Identities=26% Similarity=0.403 Sum_probs=170.0
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
|...+.||+|++|.||++.. .+++.+++|++........+.+.+|+.+++.++|||++++++++...+..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44557899999999999964 56889999998765555556788999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ..+++..+..++.|++.+|.+||+.+ ++||||+|+||+++.++.++|+|||.+........ .
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~ 171 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--R 171 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc--c
Confidence 999988854 34788999999999999999999987 99999999999999999999999998875433221 1
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....|+..|+|||.+.+..++.++|+|||||++|||++|+.||...
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~ 218 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE 218 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC
Confidence 22346788999999998888999999999999999999999998543
No 322
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=7.4e-29 Score=249.40 Aligned_cols=201 Identities=22% Similarity=0.406 Sum_probs=171.2
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|+||.+|.+.. .+++.+++|++... .....+++.+|+.++++++||||+++.+++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999954 46889999998643 233445788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|..++... ....+++.....++.|++.++.|||+++ ++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 9999998887542 2234788999999999999999999987 99999999999999999999999999976543211
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......+++.|+|||.+.+..++.++|+|||||++++|++|+.|+...
T Consensus 157 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08218 157 --LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG 204 (256)
T ss_pred --hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence 112235788899999998888999999999999999999999998643
No 323
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=9.2e-29 Score=248.61 Aligned_cols=201 Identities=25% Similarity=0.407 Sum_probs=171.1
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|++|.||++.. .+++.+|+|++... ..+..+.+.+|++++++++|||++++++.+...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 478889999999999999954 46889999998654 233456788999999999999999999999988999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~DfGla~~~~~~~ 591 (656)
+++++|.+++.... ...+++..+..++.+++++|.|||+++ ++|+||+|+||+++++ +.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999985432 335789999999999999999999987 9999999999999865 458999999998654321
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+....++.++||||||+++|+|++|+.||...+
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 205 (256)
T cd08220 157 ---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN 205 (256)
T ss_pred ---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc
Confidence 1223467889999999988888999999999999999999999986543
No 324
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.96 E-value=1.3e-28 Score=247.75 Aligned_cols=201 Identities=34% Similarity=0.530 Sum_probs=168.9
Q ss_pred CCCCCcccccCceEEEEEEeCC-----CCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 437 FSSANKLGEGGFGPVYKGNLPR-----GQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
+++.+.||.|+||.||++.... +..+|+|++...... ..+.+.+|+.++..++|+|++++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999996643 378999999765433 5668899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||+++++|..++..... ..+++.....++.|++.++.+||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999988854222 12899999999999999999999987 999999999999999999999999999865433
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
..... ....++..|+|||.+....++.++|+||||++++||++ |+.||...
T Consensus 157 ~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~ 208 (258)
T smart00219 157 DYYKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM 208 (258)
T ss_pred ccccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11111 12236788999999988889999999999999999998 77777543
No 325
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=3.2e-29 Score=256.23 Aligned_cols=197 Identities=25% Similarity=0.407 Sum_probs=163.9
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|+||.||+|.. .+|+.+|+|+++... ......+.+|++++++++|||++++++++.+....++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 477889999999999999965 468899999986542 22234577899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++ +|..++... ...+++..+..++.||++||.|||+.+ ++||||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 153 (284)
T cd07839 81 CDQ-DLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV- 153 (284)
T ss_pred CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence 974 676665432 345899999999999999999999987 9999999999999999999999999997653321
Q ss_pred ccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.|+.
T Consensus 154 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~ 201 (284)
T cd07839 154 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 201 (284)
T ss_pred -CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCc
Confidence 111223567899999988664 47899999999999999999999864
No 326
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=4.7e-29 Score=252.14 Aligned_cols=198 Identities=26% Similarity=0.363 Sum_probs=171.7
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
+|+..+.||+|++|.||++... +++.+++|++.... .+..+++.+|++++++++||||+++++.+......++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5778889999999999999664 68899999987653 344567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-YSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
++++|..++.... ..+++.....++.|++.+|.|||+ .+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9999999885432 468889999999999999999999 66 99999999999999999999999999875532211
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. ...++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 157 ~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 157 K----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred h----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 1 146788999999998889999999999999999999999999654
No 327
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=8.5e-29 Score=254.97 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=166.6
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChh-----hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQ-----GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
+|+..+.||+|++|.||+|.. .+++.|+||.+...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999965 46889999998765322 234567899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
|||+ +++|..++.... ..+++..+..++.|++++|.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899998885432 35899999999999999999999987 99999999999999999999999999986543
Q ss_pred CccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
... ......++..|+|||.+.+ ..++.++|+|||||+++||++|.+||..
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~ 205 (298)
T cd07841 155 PNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPG 205 (298)
T ss_pred CCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccC
Confidence 221 1222345778999998754 4578899999999999999999777754
No 328
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=1.1e-28 Score=250.68 Aligned_cols=203 Identities=26% Similarity=0.424 Sum_probs=164.1
Q ss_pred CCCCCcccccCceEEEEEEeC----CCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------
Q 006211 437 FSSANKLGEGGFGPVYKGNLP----RGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD------ 504 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 504 (656)
|++.+.||+|+||.||+|... +++.+|||++... .....+++.+|++++++++|||++++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999642 3678999998754 2344567889999999999999999999886532
Q ss_pred ceEEEEEecCCCChhhhhhCCC---cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEec
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPI---RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDF 581 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~Df 581 (656)
..++++||+++|+|..++.... ....+++.....++.|++.+|.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 2368899999999987764211 2235788999999999999999999987 999999999999999999999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCC
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYY 642 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~ 642 (656)
|+++...............+++.|++||.+....++.++|||||||++|||++ |+.||...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~ 219 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV 219 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC
Confidence 99986543221112222345678999999988889999999999999999999 88887544
No 329
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.96 E-value=1.2e-28 Score=248.70 Aligned_cols=194 Identities=26% Similarity=0.431 Sum_probs=156.5
Q ss_pred CcccccCceEEEEEEeC----CCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEe-eCCceEEEEEecC
Q 006211 441 NKLGEGGFGPVYKGNLP----RGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCT-ERDENMLIYEYLP 514 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 514 (656)
+.||+|+||.||+|... ....+|+|++... .....+.+.+|+.+++.++|||++++++++. .+...++++||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999642 2357999988643 3344567889999999999999999999775 3556789999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc-
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE- 593 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~- 593 (656)
+++|..++... ....++.....++.+++.||.|||+.+ ++||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 99999998543 223677888899999999999999987 999999999999999999999999999754322111
Q ss_pred -cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 594 -ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 594 -~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
.......++..|+|||.+....++.++|||||||++|||++|+.|+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~ 202 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 202 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCC
Confidence 1111234567899999998888999999999999999999965443
No 330
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.96 E-value=7.1e-29 Score=254.10 Aligned_cols=200 Identities=24% Similarity=0.349 Sum_probs=170.2
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|++.+.||+|++|.||+|... +++.|++|+++.. .....+.+.+|++++++++|+||+++++++...+..++++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999654 5889999988653 23334678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|++++.+..+... ...+++..+..++.+++.+|.|||+.+ ++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 9998777665532 334889999999999999999999987 9999999999999999999999999998765432
Q ss_pred cccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
. .......++..|+|||.+... .++.++|+||||+++|||++|+.||..
T Consensus 155 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~ 204 (288)
T cd07833 155 A-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPG 204 (288)
T ss_pred c-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2 122234678889999999887 789999999999999999999999864
No 331
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=1.2e-28 Score=251.11 Aligned_cols=194 Identities=24% Similarity=0.394 Sum_probs=164.7
Q ss_pred ccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||+|+||+||++.. .+++.+|+|.+.... ....+.+.+|++++++++|||++++++.+...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999954 468899999986532 22234567899999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
..++..... ..+++..+..++.|++.+|.|||+.+ ++||||+|+||++++++.++|+|||++...... .....
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKG 153 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC---Ccccc
Confidence 988854322 35889999999999999999999987 999999999999999999999999998765331 11222
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..++..|+|||.+.+..++.++|+|||||++++|++|+.||....
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 198 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK 198 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence 356788999999988889999999999999999999999996543
No 332
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=1.5e-28 Score=250.68 Aligned_cols=192 Identities=27% Similarity=0.356 Sum_probs=156.5
Q ss_pred cccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHHHHH---HhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 442 KLGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEVSLT---ARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
.||+|+||.||++.. .+++.+|+|.+..... .....+.+|..++ ...+|||++.+.+.+...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999965 4688999998865421 1122234444333 33479999999999998899999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+|||+++++.++|+|||++......
T Consensus 81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---- 150 (279)
T cd05633 81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK---- 150 (279)
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecccc----
Confidence 9999888753 335899999999999999999999987 999999999999999999999999998754322
Q ss_pred cccccccccccccccccc-CCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......|+..|+|||.+. +..++.++|+||+||++|||++|+.||....
T Consensus 151 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 200 (279)
T cd05633 151 KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200 (279)
T ss_pred CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCC
Confidence 112236889999999886 4567899999999999999999999996543
No 333
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=1.1e-28 Score=252.22 Aligned_cols=201 Identities=24% Similarity=0.368 Sum_probs=162.6
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHH-HHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSL-TARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|++.+.||+|+||.||++.. .+++.||+|+++.... +...++..|+.+ ++.++|||++++++++......++++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 4688889999999999999965 4689999999876432 223345556665 566789999999999999999999999
Q ss_pred ecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 512 YLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 512 ~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
|++ ++|..++... .....+++..+..++.|++.||.|||+.. +++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 996 6777666432 23356899999999999999999999862 3999999999999999999999999999765322
Q ss_pred ccccccccccccccccccccccC----CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKK----GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
. ......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||..
T Consensus 158 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 V---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred c---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 1 1122357888999998754 4568899999999999999999999864
No 334
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.96 E-value=2.9e-28 Score=246.80 Aligned_cols=198 Identities=24% Similarity=0.348 Sum_probs=163.4
Q ss_pred HHHHHHhcCCCCCCcc--cccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC
Q 006211 428 SDIKAATNNFSSANKL--GEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER 503 (656)
Q Consensus 428 ~~~~~~~~~y~~~~~i--G~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 503 (656)
.+.....++|++.+.+ |+|+||.||++.. .++..+|+|.+........ |+.....+ +|||++++++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 4445556677777776 9999999999954 5688899999865422211 22222222 799999999999999
Q ss_pred CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEecc
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDFG 582 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfG 582 (656)
+..++||||+++++|..++... ..+++..+..++.|+++||.|||+.+ ++||||+|+||+++.++ .++|+|||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg 155 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYG 155 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCc
Confidence 9999999999999999988542 26899999999999999999999987 99999999999999998 99999999
Q ss_pred CccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
++...... ....++..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 209 (267)
T PHA03390 156 LCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209 (267)
T ss_pred cceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 98754322 1235788999999999888999999999999999999999999743
No 335
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=9.9e-29 Score=248.29 Aligned_cols=196 Identities=29% Similarity=0.471 Sum_probs=165.4
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
++|++.+.||+|+||.||++.. +++.+|+|.++... ..+.+.+|+.++++++|||++++++++.. +..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence 4578889999999999999864 67889999986543 23578899999999999999999998865 45799999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++.... ...+++..+..++.|++.++.|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 82 KGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 999999985432 335788999999999999999999987 9999999999999999999999999987543211
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHc-CCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS-SKRNARYYG 643 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt-g~~p~~~~~ 643 (656)
.....+..|+|||.+.+..++.++|+||||+++|||++ |+.||....
T Consensus 155 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 202 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS 202 (254)
T ss_pred --CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC
Confidence 11233567999999988889999999999999999998 888886543
No 336
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.96 E-value=5.4e-29 Score=250.85 Aligned_cols=190 Identities=26% Similarity=0.416 Sum_probs=158.1
Q ss_pred CcccccCceEEEEEEeCC--------CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 441 NKLGEGGFGPVYKGNLPR--------GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+.||+|+||.||+|.... ...+++|.+........+.+.+|+.+++.++|||++++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999995422 234888888665555556788999999999999999999999998999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCc--------EEEEeccCc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN--------PKISDFGMA 584 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~--------~kl~DfGla 584 (656)
+++|+|..++.... ..+++..++.++.|++.||.|||+.+ ++||||||+||+++.++. ++++|||++
T Consensus 81 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 81 VKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence 99999999986432 35788999999999999999999987 999999999999987765 699999988
Q ss_pred cccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCC-CCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSK-RNARY 641 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~-~p~~~ 641 (656)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|. .|+..
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~ 208 (258)
T cd05078 156 ITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSA 208 (258)
T ss_pred cccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhh
Confidence 65432 122356788999999876 45789999999999999999995 45433
No 337
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=1.7e-28 Score=251.69 Aligned_cols=200 Identities=25% Similarity=0.339 Sum_probs=167.5
Q ss_pred CCCCCCcccccCceEEEEEEe----CCCCEEEEEEccCCCh----hhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCce
Q 006211 436 NFSSANKLGEGGFGPVYKGNL----PRGQEFAVKRLSATST----QGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 506 (656)
+|++.+.||+|+||.||++.. .++..||+|++..... ...+.+.+|+.++.++ +|+||+++.+++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999964 3688999999875321 2345678899999999 599999999999988899
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++|+||+++++|.+++.. ...+++.....++.|++++|.|||+.+ ++||||+|+|||+++++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 999999999999988853 335788899999999999999999987 99999999999999999999999999976
Q ss_pred cccCccccccccccccccccccccccCC--CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDVDEANTGRIVGTYGYVPPEYVKKG--IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...... .......|+..|+|||.+... .++.++||||||+++|+|++|+.||...
T Consensus 155 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 211 (290)
T cd05613 155 FHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211 (290)
T ss_pred cccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcC
Confidence 533211 112234678899999988653 4678999999999999999999999643
No 338
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.96 E-value=1.1e-28 Score=252.12 Aligned_cols=202 Identities=31% Similarity=0.462 Sum_probs=169.3
Q ss_pred cCCCCCCcccccCceEEEEEEeC-----CCCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEee--CCce
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-----RGQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTE--RDEN 506 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 506 (656)
..|+..+.||+|+||.||++... .+..+|||.++..... ..+.+.+|+++++.++|||++++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35677899999999999999643 3678999999765443 45678999999999999999999999877 5578
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++++||+++++|..++.... ..+++..+..++.|++.+|.|||+.+ ++|+||||+||+++.++.++|+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 99999999999999985432 24889999999999999999999987 99999999999999999999999999987
Q ss_pred cccCcccc-ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 587 FRKDVDEA-NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 587 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
........ ......++..|+|||.+....++.++|+||||++++||++|+.|+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 214 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS 214 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccc
Confidence 65322111 11122345679999999888899999999999999999999998754
No 339
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=2e-28 Score=248.30 Aligned_cols=201 Identities=27% Similarity=0.427 Sum_probs=167.8
Q ss_pred CCCCCCcccccCceEEEEEEeCC--CCEEEEEEccCC----------ChhhHHHHHHHHHHHHh-cCCCceeeEEEEEee
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPR--GQEFAVKRLSAT----------STQGLEEFKNEVSLTAR-LQHVNLLRVLGYCTE 502 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 502 (656)
+|++.+.||+|+||.||++.... ++.+|+|.+... ......++.+|+.++.+ ++|||++++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999997654 678999987532 22234557778888765 799999999999999
Q ss_pred CCceEEEEEecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEec
Q 006211 503 RDENMLIYEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDF 581 (656)
Q Consensus 503 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~Df 581 (656)
.+..++++||+++++|..++... .....+++..++.++.|++.+|.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999998877431 23446889999999999999999999633 3999999999999999999999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
|++....... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||..
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~ 215 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS 215 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccc
Confidence 9997654322 22334678899999999888899999999999999999999999854
No 340
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=1.8e-28 Score=247.47 Aligned_cols=206 Identities=25% Similarity=0.377 Sum_probs=170.8
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee--CCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTE--RDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 510 (656)
+|++.+.||.|+||.||++.. .++..+|+|++... .....+.+.+|+++++.++|||++++++++.. ....++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999954 56789999998653 33445678899999999999999999998754 34578999
Q ss_pred EecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 511 EYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYS--NFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 511 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
||+++++|..++... .....+++..++.++.+++.+|.|||..+ ..+++|+||+|+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999888542 22356899999999999999999999332 334999999999999999999999999999876
Q ss_pred ccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 588 RKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 588 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..... ......++..|+|||.+....++.++|+||||+++++|++|+.||....
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN 214 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence 43321 1223467889999999988889999999999999999999999997543
No 341
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.96 E-value=3.5e-28 Score=243.26 Aligned_cols=199 Identities=29% Similarity=0.475 Sum_probs=174.5
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
.|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|||++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3677889999999999999764 688999999987665556788999999999999999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++.... ..+++.....++.+++++|.+||+.+ ++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999998875432 45899999999999999999999977 99999999999999999999999999976543321
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+....++.++|+||||+++++|++|+.||...
T Consensus 154 -~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 154 -RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred -ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23346788999999998888899999999999999999999998654
No 342
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=3.1e-28 Score=251.92 Aligned_cols=195 Identities=30% Similarity=0.429 Sum_probs=164.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
+.|+..+.||+|+||.||+|.. .+++.||+|++.... .+..+++.+|+++++.++|||++++.+++...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4578889999999999999965 468899999886432 233456889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
||++ |++..++... ...+++..+..++.|++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~--~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVH--KKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 4665555322 235899999999999999999999987 999999999999999999999999998754321
Q ss_pred cccccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
....++..|+|||.+. ...++.++||||||+++|||++|+.||..
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~ 216 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (307)
T ss_pred ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence 1235678899999874 45688899999999999999999999864
No 343
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.96 E-value=2.5e-28 Score=249.97 Aligned_cols=203 Identities=28% Similarity=0.434 Sum_probs=174.5
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
..+.|+..+.||+|++|.||++... .+..+++|++..... ..+.+.+|+++++.++|+|++++++.+......++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 3456778889999999999999665 688999999976544 45678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++++|.+++.... ..+++..+..++.+++.+|.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999986532 36899999999999999999999977 9999999999999999999999999886543321
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. ......++..|+|||.+.+..++.++|+||||+++|+|++|+.|+....
T Consensus 171 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 S--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred h--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 1 1223356788999999988889999999999999999999999986543
No 344
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=1.4e-28 Score=251.41 Aligned_cols=200 Identities=27% Similarity=0.412 Sum_probs=166.6
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||.|++|.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 478889999999999999965 468899999886542 22335688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+. ++|..++... ....+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~- 154 (284)
T cd07860 81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 154 (284)
T ss_pred cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc-
Confidence 96 5787777442 2345889999999999999999999987 9999999999999999999999999987653321
Q ss_pred ccccccccccccccccccccCCC-CCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGI-YSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.......++..|+|||.+.+.. ++.++||||||+++|||+||+.||...
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 155 -RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred -cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 1122235678899999876544 688999999999999999999998643
No 345
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=1.9e-28 Score=258.70 Aligned_cols=198 Identities=24% Similarity=0.316 Sum_probs=166.0
Q ss_pred HhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC------
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER------ 503 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 503 (656)
..++|+..+.||+|+||.||++.. .+++.||+|++... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999954 47899999998653 233345677899999999999999999988643
Q ss_pred CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
...++|+||+.+ +|...+.. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence 246899999964 67666532 2788899999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 165 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 165 ARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred ceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 98654321 122335788999999999989999999999999999999999999654
No 346
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=2.2e-28 Score=251.32 Aligned_cols=201 Identities=24% Similarity=0.367 Sum_probs=166.7
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 509 (656)
++|+..+.||+|+||.||+|... +++.+++|.++.... .....+.+|+.++++++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999764 588999999875432 2223567899999999999999999998877 789999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
+||+++ +|..++... ...+++.....++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 85 ~e~~~~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVEH-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcCc-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999974 887777442 225899999999999999999999987 99999999999999999999999999986543
Q ss_pred CccccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.. .......+++.|+|||.+.+. .++.++|+||||+++|||++|+.||....
T Consensus 159 ~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~ 211 (293)
T cd07843 159 PL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS 211 (293)
T ss_pred Cc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 21 112234567889999988654 46889999999999999999999986543
No 347
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2e-28 Score=250.79 Aligned_cols=201 Identities=27% Similarity=0.388 Sum_probs=169.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 510 (656)
++|+..+.||.|++|.||++.. .+++.+|+|.+..... ....++.+|++++++++||||+++++++... ...++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 3577889999999999999965 4588999999875433 3456788999999999999999999988654 3679999
Q ss_pred EecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 511 EYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 511 e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||+++++|.+++... .....+++.....++.|++++|.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999998876431 12345788999999999999999999987 99999999999999999999999999875432
Q ss_pred CccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 590 DVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 590 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. .....++..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 21 11235678899999998888999999999999999999999999755
No 348
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=2.8e-28 Score=246.15 Aligned_cols=192 Identities=28% Similarity=0.382 Sum_probs=166.2
Q ss_pred ccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||.|++|.||++... +++.+++|++.... ....+.+.+|+.+++.++||||+++++.+.+....++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999664 48899999986542 23346788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
..++.. ...+++..+..++.|++++|.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~ 151 (262)
T cd05572 81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWT 151 (262)
T ss_pred HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccc
Confidence 998854 234788999999999999999999987 9999999999999999999999999998654321 2223
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..++..|+|||.+....++.++|+||||+++|||++|+.||....
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 467889999999988889999999999999999999999997654
No 349
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=240.03 Aligned_cols=196 Identities=23% Similarity=0.330 Sum_probs=162.8
Q ss_pred HhcCCCCC-CcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEee----CCc
Q 006211 433 ATNNFSSA-NKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTE----RDE 505 (656)
Q Consensus 433 ~~~~y~~~-~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 505 (656)
++++|++. ++||-|-.|.|..+ +..+++.+|+|++..... .++|+++--+. .|||||++++++.+ ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K-----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK-----ARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH-----HHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 56677764 67999999999999 445789999999876532 35677765444 69999999998754 456
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC---CCcEEEEecc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN---ELNPKISDFG 582 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~---~~~~kl~DfG 582 (656)
+.+|||.|+||.|...+.++ ....+++.++..|+.||+.|+.|||+.+ |.||||||+|+|... |..+||+|||
T Consensus 134 LLiVmE~meGGeLfsriq~~-g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDR-GDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHc-ccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccc
Confidence 78999999999998888654 3446899999999999999999999998 999999999999974 4569999999
Q ss_pred CccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
+|+.-.. .......+-|+.|.|||++....|+...|+||+||++|-||+|.+||.
T Consensus 210 FAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFY 264 (400)
T KOG0604|consen 210 FAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264 (400)
T ss_pred cccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCccc
Confidence 9986432 222334577999999999999999999999999999999999999994
No 350
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=3.3e-28 Score=247.92 Aligned_cols=191 Identities=29% Similarity=0.382 Sum_probs=156.6
Q ss_pred cccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHH---HHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 442 KLGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEV---SLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
.||+|+||.||++.. .+++.||+|.+..... .....+..|. ..+....|||++++.+.+...+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999954 4688999998865421 1112233343 34444579999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++.. ...+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||++..+....
T Consensus 81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 9999888743 345899999999999999999999987 9999999999999999999999999987553221
Q ss_pred ccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....|+..|+|||.+.+. .++.++|+||+|+++|||++|+.||...
T Consensus 152 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 1234688999999998754 5889999999999999999999999654
No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=2.2e-28 Score=251.03 Aligned_cols=194 Identities=26% Similarity=0.392 Sum_probs=167.6
Q ss_pred CCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 440 ANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
..+||+|+||.||++.. .+++.+|||.+........+.+.+|+.+++.++|+|++++++.+...+..+++|||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 35799999999999965 56889999998765555566788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
..++.. ..+++.....++.|++.+|.|||+.+ ++|+||+|+||++++++.++|+|||++....... .....
T Consensus 105 ~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~~ 175 (292)
T cd06657 105 TDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKS 175 (292)
T ss_pred HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc--ccccc
Confidence 887632 34788999999999999999999987 9999999999999999999999999987554321 11223
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
..++..|+|||.+.+..++.++|+||+|+++|||++|+.||...
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~ 219 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 46788999999998888899999999999999999999998643
No 352
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.96 E-value=4.7e-28 Score=243.40 Aligned_cols=202 Identities=28% Similarity=0.438 Sum_probs=174.6
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 510 (656)
+|+..+.||+|++|.||+|... +++.+++|++..... ...+.+.+|+..+++++||||+++++.+... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999665 688999999876542 4567789999999999999999999999888 8899999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
|++++++|.+++... ..+++..+..++.+++++|.|||+.+ ++|+||+|+||++++++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 999999999988543 26899999999999999999999987 999999999999999999999999999876543
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..........++..|+|||.+.....+.++||||||+++++|++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 32111233467889999999988889999999999999999999999997654
No 353
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=3.5e-28 Score=250.00 Aligned_cols=202 Identities=24% Similarity=0.344 Sum_probs=164.4
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCc-----
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDE----- 505 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 505 (656)
++|+..+.||+|+||.||+|.. .+++.||+|.++.... .....+.+|+.+++.++ |||++++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4688899999999999999965 4688999998765422 22356788999999995 6999999999877665
Q ss_pred eEEEEEecCCCChhhhhhCCCc--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEEEecc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIR--RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKISDFG 582 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl~DfG 582 (656)
.+++|||+++ +|..++..... ...+++..+..++.||++||.|||+.+ ++||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 78777644222 245799999999999999999999987 999999999999998 8899999999
Q ss_pred CccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+++.+..... ......+++.|+|||.+.+ ..++.++|+||||+++|||++|+.||...
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 215 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD 215 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence 9976533211 1122356788999998764 45789999999999999999999998653
No 354
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=3.1e-28 Score=247.34 Aligned_cols=203 Identities=27% Similarity=0.408 Sum_probs=169.4
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC------
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD------ 504 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------ 504 (656)
..++|++.+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+.+++++ .|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 3578999999999999999999664 578999999876543 346788999999999 6999999999997644
Q ss_pred ceEEEEEecCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4799999999999988875422 2346889999999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccC-----CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKK-----GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+....... .......++..|+|||.+.. ..++.++|||||||+++||++|+.||..
T Consensus 160 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 220 (275)
T cd06608 160 SAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCD 220 (275)
T ss_pred ceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccc
Confidence 87653321 12223467889999998753 3467899999999999999999999964
No 355
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=1.7e-28 Score=257.23 Aligned_cols=200 Identities=25% Similarity=0.402 Sum_probs=164.1
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ce
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----EN 506 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 506 (656)
.++|++.+.||+|+||.||+|.. .+++.||+|+++... ......+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46799999999999999999954 568999999986432 234456788999999999999999998876543 47
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++++||+++ +|...+. ...+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~-~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhccc-CHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence 899999964 6666552 335889999999999999999999987 99999999999999999999999999976
Q ss_pred cccCcccc-ccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 587 FRKDVDEA-NTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 587 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 54322111 1123467889999998654 5688999999999999999999999954
No 356
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=2e-28 Score=247.19 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=166.4
Q ss_pred ccccCceEEEEEEeC-CCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNLP-RGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||+|+||.||++... +++.+++|++..... ...+.+.+|++++++++|||++++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999765 489999999875533 3456788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc------
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD------ 592 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~------ 592 (656)
..++... ..+++..+..++.|++++|.|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENV---GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 9888542 25899999999999999999999987 99999999999999999999999999875432211
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
........++..|+|||.......+.++|+||||++++||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 205 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET 205 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 112233467889999999988888999999999999999999999986443
No 357
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=3.1e-28 Score=250.22 Aligned_cols=203 Identities=18% Similarity=0.218 Sum_probs=151.5
Q ss_pred hcCCCCCCcccccCceEEEEEEeCC----CCEEEEEEccCCChhhH-----------HHHHHHHHHHHhcCCCceeeEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPR----GQEFAVKRLSATSTQGL-----------EEFKNEVSLTARLQHVNLLRVLG 498 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~l~~ 498 (656)
.++|++.++||+|+||.||+|.... +..+++|.......... .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3678999999999999999996543 34667775433221110 01122334455678999999998
Q ss_pred EEeeCC----ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC
Q 006211 499 YCTERD----ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL 574 (656)
Q Consensus 499 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~ 574 (656)
++.... ..++++|++.. ++...+.. ....++..+..++.|++.||.|||+.+ ++||||||+|||++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN 163 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence 766543 33667776643 44444422 122467888999999999999999987 99999999999999999
Q ss_pred cEEEEeccCccccccCccc-----cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 575 NPKISDFGMAKLFRKDVDE-----ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 575 ~~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.++|+|||+++.+...... .......||+.|+|||.+.+..++.++|||||||+++||++|+.||...+
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~ 237 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFG 237 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999866432111 11123468999999999999999999999999999999999999997664
No 358
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.6e-30 Score=257.99 Aligned_cols=199 Identities=25% Similarity=0.303 Sum_probs=175.1
Q ss_pred CCCCCcccccCceEEEEEEeCCCC-EEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 437 FSSANKLGEGGFGPVYKGNLPRGQ-EFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~~~~-~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
++.+..||-|+||.|-.++..... .+|+|++++. .....+.+..|-++|...+.|.||+++..|.++...|++||-
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence 445678999999999998765433 4888888764 344556788899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
|-||.+-..+.+ +..++..+...++..+.+|++|||+.+ ||.|||||+|.+++.+|-+||.|||+|+.+..
T Consensus 502 ClGGElWTiLrd---Rg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--- 572 (732)
T KOG0614|consen 502 CLGGELWTILRD---RGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--- 572 (732)
T ss_pred hcCchhhhhhhh---cCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc---
Confidence 999999988865 345788889999999999999999998 99999999999999999999999999998764
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
...+.+.+||+.|.|||++.++..+.++|.||||+++||||+|++||...++
T Consensus 573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 3456678999999999999999999999999999999999999999987654
No 359
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.96 E-value=4.3e-28 Score=247.73 Aligned_cols=199 Identities=28% Similarity=0.419 Sum_probs=165.6
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
|++.+.||.|++|.||+|.. .++..||+|++.... ....+.+.+|++++++++|||++++++++.+.+..++++||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56788999999999999965 468999999987543 223356788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
+ ++|..++.... ...+++..+..++.|++++|.|||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 5 68888774422 235899999999999999999999987 99999999999999999999999999975432211
Q ss_pred cccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......++..|+|||.+.+. .++.++|+||||+++|||++|+.||...
T Consensus 155 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 155 -TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred -ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11223567889999987654 5788999999999999999999998643
No 360
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.2e-29 Score=231.83 Aligned_cols=206 Identities=21% Similarity=0.435 Sum_probs=173.4
Q ss_pred hcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeC--CceEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTER--DENMLI 509 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 509 (656)
.++|++.+++|+|.+++||.| ...+.+.++||+++.... +.+.+|+.+|+.++ ||||+++++...+. ....+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 467888999999999999999 566788999999976543 46789999999997 99999999998664 456899
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEeccCccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGMAKLFR 588 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~DfGla~~~~ 588 (656)
+||+.+.+...+. ..++..+...++.+++.||.|+|++| |+|||+||.|++||.. -.++|+|+|+|..+.
T Consensus 114 FE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred hhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcC
Confidence 9999998886554 24777888999999999999999998 9999999999999964 569999999998876
Q ss_pred cCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCCccccccccccc
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNFLEYAS 655 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~ 655 (656)
+..+ ....+.+..|.-||.+.. ..|+.+-|+|||||++..|+..+.|| |.+.++...++..|+
T Consensus 185 p~~e---YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepF-FhG~dN~DQLVkIak 248 (338)
T KOG0668|consen 185 PGKE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF-FHGHDNYDQLVKIAK 248 (338)
T ss_pred CCce---eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcc-cCCCCCHHHHHHHHH
Confidence 5433 333467888999998865 45789999999999999999999999 567777777777664
No 361
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=5.7e-28 Score=243.62 Aligned_cols=190 Identities=23% Similarity=0.310 Sum_probs=158.7
Q ss_pred CcccccCceEEEEEEe-CCCCEEEEEEccCCCh---hhHHHHHHHHHHH-HhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST---QGLEEFKNEVSLT-ARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
+.||+|+||.||+|.. .+++.||+|+++.... .....+..|..++ ...+|||++++++.+...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999965 4588999999875432 1222344454443 445899999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
++|..++.. ...+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||+++....
T Consensus 82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 999998843 235788999999999999999999987 99999999999999999999999999875332
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 196 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAE 196 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCC
Confidence 12235778899999998888899999999999999999999999644
No 362
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=4.3e-28 Score=251.12 Aligned_cols=201 Identities=26% Similarity=0.390 Sum_probs=164.5
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENML 508 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 508 (656)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.++++++|+|++++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 35788999999999999999965 4689999999865422 1223456899999999999999999998755 46799
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
|+||+++ +|..++... ...+++..+..++.|++++|.|||+.+ ++||||||+||++++++.+||+|||++....
T Consensus 86 v~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999964 777776432 245899999999999999999999987 9999999999999999999999999998664
Q ss_pred cCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 160 LPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred CccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3221 1112245778999998865 45789999999999999999999998643
No 363
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=3.5e-28 Score=255.02 Aligned_cols=203 Identities=25% Similarity=0.384 Sum_probs=166.2
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC--ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC--Cce
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT--STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER--DEN 506 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 506 (656)
..++|++.+.||+|+||.||+|... +++.+|+|++... .......+.+|+.++.++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4567888999999999999999654 5789999988542 223345677899999999 999999999988653 357
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++|+||++ ++|..++.. ..+++.....++.|++.+|.|||+.+ ++||||+|+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 588777643 25788899999999999999999987 99999999999999999999999999986
Q ss_pred cccCccc---cccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 587 FRKDVDE---ANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 587 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....... .......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~ 217 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTS 217 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 5433221 12223467889999998754 557889999999999999999999986543
No 364
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.96 E-value=1e-27 Score=240.46 Aligned_cols=199 Identities=29% Similarity=0.435 Sum_probs=172.6
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|++.+.||+|++|.||++... +++.+++|.+..... ...+.+.+|++++++++|||++++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999554 578999999876643 4556789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+++++|.+++... ..+++..+..++.|++.++.+||+.+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999887532 46899999999999999999999987 99999999999999999999999999986643322
Q ss_pred ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. .....++..|+|||......++.++|+||||+++++|++|+.|+...
T Consensus 155 ~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~ 202 (254)
T cd06627 155 D--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDL 202 (254)
T ss_pred c--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Confidence 1 22346788999999988877899999999999999999999998643
No 365
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=3.3e-28 Score=251.94 Aligned_cols=203 Identities=22% Similarity=0.383 Sum_probs=163.5
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc-----
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE----- 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 505 (656)
.++|+..+.||+|+||.||++.. .+++.||||.+.... ......+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 34688999999999999999965 468899999886542 2223356789999999999999999999876543
Q ss_pred ---eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 506 ---NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 506 ---~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
.++|+||+.+ +|...+... ...+++.+...++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCC
Confidence 4999999965 676666432 235889999999999999999999987 9999999999999999999999999
Q ss_pred CccccccCccc--cccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 583 MAKLFRKDVDE--ANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
++......... .......++..|+|||.+.+. .++.++|+||||+++|||++|+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 99765432211 112234567889999987654 4688999999999999999999998654
No 366
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=8.2e-28 Score=247.16 Aligned_cols=201 Identities=25% Similarity=0.392 Sum_probs=164.0
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|+..+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|||++++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999654 688999999865422 233567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEEEeccCccccccC
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl~DfGla~~~~~~ 590 (656)
|++ ++|..++... .....++..+..++.||+.||.|||+.+ ++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 4676665332 2223578888899999999999999987 999999999999985 557999999999765332
Q ss_pred ccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
. .......+++.|+|||.+.+ ..++.++|||||||++|+|+||+.||...
T Consensus 157 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 157 V--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred c--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1 11122356789999998765 45789999999999999999999999643
No 367
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=4.1e-28 Score=248.63 Aligned_cols=201 Identities=26% Similarity=0.410 Sum_probs=162.2
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC-hhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS-TQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|+.++.++. ||||+++++++......+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 345567899999999999954 468999999987543 234457889999999996 99999999999988899999999
Q ss_pred cCCCChhhhhhC--CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC
Q 006211 513 LPNKSLDLYLFD--PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 513 ~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~ 590 (656)
+.. ++..+... ......+++..+..++.++++||+|||+.. +++||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 44433211 112346889999999999999999999752 3999999999999999999999999999765432
Q ss_pred ccccccccccccccccccccccCC---CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKG---IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. .....++..|+|||.+... .++.++|||||||++|||++|+.||...
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 11 1223578899999998766 6889999999999999999999998654
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=6e-28 Score=253.84 Aligned_cols=203 Identities=23% Similarity=0.341 Sum_probs=167.8
Q ss_pred HHHHHHHhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC
Q 006211 427 FSDIKAATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTER 503 (656)
Q Consensus 427 ~~~~~~~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 503 (656)
..++....++|++.+.||+|+||.||++. ..+++.||+|++.... ....+.+.+|+.++++++||||+++.+++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 45566778999999999999999999995 4568899999987542 22345678899999999999999999987543
Q ss_pred ------CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEE
Q 006211 504 ------DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPK 577 (656)
Q Consensus 504 ------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~k 577 (656)
...+++++++ +++|..++.. ..+++..+..++.|+++||.|||+.+ ++||||||+||++++++.+|
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEE
Confidence 3367788776 7788777632 34889999999999999999999987 99999999999999999999
Q ss_pred EEeccCccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 578 ISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 578 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
|+|||++..... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 161 l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 221 (345)
T cd07877 161 ILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 221 (345)
T ss_pred Eecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999875432 1123467889999998765 56788999999999999999999998643
No 369
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.95 E-value=1.2e-27 Score=248.66 Aligned_cols=194 Identities=29% Similarity=0.443 Sum_probs=163.3
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.|+..+.||+|+||.||++.. .++..+|+|++.... .+....+.+|+.++++++|||++++++++......++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 366788999999999999965 468899999986432 2334578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++ ++.+.+.. ....+++.++..++.+++.+|.|||+.+ ++||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~g-~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-- 177 (317)
T cd06635 106 YCLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP-- 177 (317)
T ss_pred CCCC-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC--
Confidence 9975 66665533 2345889999999999999999999987 99999999999999999999999999865432
Q ss_pred ccccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.....++..|+|||.+. ...++.++|||||||++|||++|+.||..
T Consensus 178 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 226 (317)
T cd06635 178 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 226 (317)
T ss_pred ----cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 11235788899999873 45688999999999999999999999854
No 370
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=236.79 Aligned_cols=202 Identities=22% Similarity=0.353 Sum_probs=173.9
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENML 508 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 508 (656)
-++|..+++||+|+|+.|..+++ ++.+.+|+|+++++ ..+..+-.+.|-.+..+- +||.+|-+..+|..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 36788999999999999999965 45788999998765 233444566777777766 79999999999999999999
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
|.||+++|+|--.+ +++..++++.++.+...|+-+|.|||+.+ ||.||||..|+|+|..|++||+|+|+++.-.
T Consensus 329 vieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence 99999999985444 34456999999999999999999999998 9999999999999999999999999998533
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. ....+++.+||+.|+|||++.+..|..++|.|+|||+++||+.|+.||+--+
T Consensus 403 ~--~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivg 455 (593)
T KOG0695|consen 403 G--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVG 455 (593)
T ss_pred C--CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence 2 2334567899999999999999999999999999999999999999996544
No 371
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=1.1e-27 Score=240.67 Aligned_cols=203 Identities=24% Similarity=0.408 Sum_probs=174.9
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|++|.||++... ++..+++|++..... .....+.+|+++++.++|||++++.+.+......++++|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999654 588999999876532 4556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
+++++|..++.... ....+++.....++.+++++|.+||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999998886532 1356899999999999999999999987 9999999999999999999999999997654332
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......+++.|+|||.+....++.++|+||+|+++++|++|+.||...+
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 207 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN 207 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence 12223467889999999988889999999999999999999999986553
No 372
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=8.6e-28 Score=245.79 Aligned_cols=200 Identities=27% Similarity=0.435 Sum_probs=166.6
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceEEEEE
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTER--DENMLIYE 511 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 511 (656)
|++.+.||+|++|.||+|... +++.+|+|++.... ......+.+|+.++++++|||++++++++... ...++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999664 58899999998653 33345688999999999999999999999887 78999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++ +|..++... ...+++..+..++.|+++||.|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9975 787776442 246889999999999999999999987 9999999999999999999999999998654432
Q ss_pred cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...+
T Consensus 155 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~ 206 (287)
T cd07840 155 S-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST 206 (287)
T ss_pred c-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 11222356778999997754 457899999999999999999999986544
No 373
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=5.3e-28 Score=243.21 Aligned_cols=201 Identities=24% Similarity=0.420 Sum_probs=169.7
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|+..+.||+|+||.||++... ++..+|+|.+.... ....+.+.+|+.+++.++|+|++++++.+......++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999654 57899999986542 23345678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfGla~~~~~~~ 591 (656)
+++++|..++... ....+++..+..++.+++++|.|||+.+ ++|+||+|+||++++++ .++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 9999999888542 2235789999999999999999999987 99999999999999885 46999999997654322
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. .....|++.|+|||.+....++.++|+||||++++||++|+.||...
T Consensus 157 ~~--~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 157 EL--AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred cc--ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 11 12235788999999998888999999999999999999999998643
No 374
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=9.8e-28 Score=247.52 Aligned_cols=203 Identities=26% Similarity=0.408 Sum_probs=165.7
Q ss_pred HHhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD---- 504 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 504 (656)
...++|++.+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++|||++++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999664 58899999987542 223346778999999999999999999887654
Q ss_pred ------ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEE
Q 006211 505 ------ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578 (656)
Q Consensus 505 ------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl 578 (656)
..++|+||+++ ++...+... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence 78999999986 565555332 335889999999999999999999987 999999999999999999999
Q ss_pred EeccCccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 579 SDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 579 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+|||++......... ......++..|+|||.+.+ ..++.++|||||||+++||++|+.||..
T Consensus 158 ~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 158 ADFGLARLYNSEESR-PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred CcccccccccCCccc-ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999865433221 1122345778999998764 4578899999999999999999999864
No 375
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=1.3e-27 Score=243.98 Aligned_cols=196 Identities=23% Similarity=0.329 Sum_probs=159.8
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcC-CCceeeEEEEEeeC--CceEEEEE
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQ-HVNLLRVLGYCTER--DENMLIYE 511 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 511 (656)
|++.+.||+|+||.||++.. .+++.+|+|+++.... .......+|+..+.++. |||++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56778999999999999964 4688999999875422 22223457888888885 99999999999887 88999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+++ ++...+... ...+++..+..++.|+++||.|||+.+ ++||||+|+||+++. +.+||+|||+++......
T Consensus 81 ~~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMDM-NLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCCc-cHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 9974 676666432 245899999999999999999999987 999999999999999 999999999998654322
Q ss_pred ccccccccccccccccccccc-CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.. ....++..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 154 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~ 202 (282)
T cd07831 154 PY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT 202 (282)
T ss_pred Cc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence 11 1235788999999764 455788999999999999999999999654
No 376
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=4e-28 Score=247.33 Aligned_cols=203 Identities=28% Similarity=0.437 Sum_probs=173.5
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 509 (656)
++|++.+.||+|++|.||++.. .+++.+++|++... .....+.+.+|.+++.+++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4688899999999999999965 46899999998653 2233456788999999998 99999999999999999999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
||++++++|..++.. ...+++.....++.|++.+|.+||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 999999999988854 236899999999999999999999987 99999999999999999999999999976543
Q ss_pred Cccc------------------cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 590 DVDE------------------ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 590 ~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.... .......++..|+|||.+....++.++|+||||++++++++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 2211 12223467889999999988889999999999999999999999997544
No 377
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=5.3e-28 Score=253.28 Aligned_cols=202 Identities=20% Similarity=0.343 Sum_probs=166.2
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEee----CCce
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTE----RDEN 506 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 506 (656)
..+|++.+.||+|++|.||+|.. .+++.||+|++.... ......+.+|+.++++++||||+++.+++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36789999999999999999954 468999999987542 2334567889999999999999999987753 3467
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++|+||+. ++|..++.. ...+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence 99999996 578777643 334899999999999999999999987 99999999999999999999999999976
Q ss_pred cccCccc--cccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDVDE--ANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
....... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~ 215 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK 215 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence 5432211 11123467889999998765 45789999999999999999999999543
No 378
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=8.2e-28 Score=241.61 Aligned_cols=201 Identities=29% Similarity=0.430 Sum_probs=172.3
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+|++.+.||+|++|.||++.. .+++.+++|.+.... .....++.+|+.+++.++||||+++.+++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477889999999999999954 467899999987542 33445678899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
+++++|..++.... ....+++..+..++.++++||.|||+.+ ++|+||+|.||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99999998875422 2345889999999999999999999987 999999999999999999999999999876443
Q ss_pred cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
......++..|+|||.+.+..++.++|+||||++++||++|+.||...+
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 205 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS 205 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 1122357889999999988889999999999999999999999997554
No 379
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=1.2e-27 Score=251.38 Aligned_cols=198 Identities=22% Similarity=0.354 Sum_probs=165.4
Q ss_pred HHhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC----
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD---- 504 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 504 (656)
...++|+..+.||+|+||.||++. ..++..||||++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 356789999999999999999995 4578999999986432 223456789999999999999999999886543
Q ss_pred --ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 505 --ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 505 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
..++|+||+ +++|..++. ...+++..+..++.|+++||.|||+.+ ++||||||+||++++++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMK----HEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecc
Confidence 348999998 778877763 235889999999999999999999987 9999999999999999999999999
Q ss_pred CccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 583 MAKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
++...... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++|+.||...
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99764321 122356788999998865 45788999999999999999999999643
No 380
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=1.1e-27 Score=249.95 Aligned_cols=199 Identities=26% Similarity=0.371 Sum_probs=165.7
Q ss_pred HHHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee-CCce
Q 006211 431 KAATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTE-RDEN 506 (656)
Q Consensus 431 ~~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~ 506 (656)
..++++|+..+.||+|+||.||++.. .+++.||+|++... .....+.+.+|+.+++.++|||++++.+++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 34678899999999999999999954 47899999987643 22334567889999999999999999998865 5578
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++++||+ +++|..++. ...+++.....++.|++++|.|||+.+ ++||||+|+||++++++.++|+|||++..
T Consensus 86 ~lv~e~~-~~~L~~~~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 86 YFVTELL-GTDLHRLLT----SRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEeehh-ccCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence 8999998 567877763 234778888899999999999999987 99999999999999999999999999875
Q ss_pred cccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 587 FRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.... .....++..|+|||.+.+ ..++.++|+|||||++|||++|+.||...
T Consensus 158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4221 122356788999998765 56899999999999999999999999654
No 381
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=1e-27 Score=245.76 Aligned_cols=199 Identities=25% Similarity=0.360 Sum_probs=166.7
Q ss_pred CCCCCCcccccCceEEEEEEe----CCCCEEEEEEccCCC----hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCce
Q 006211 436 NFSSANKLGEGGFGPVYKGNL----PRGQEFAVKRLSATS----TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 506 (656)
+|++.+.||+|++|.||++.. .+++.+|||+++... ....+.+.+|+.++.++ +|||++++.+.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999853 356889999986532 22335678899999999 599999999999999999
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++||||+++++|..++.. ...+++.....++.|++++|.|||+.+ ++||||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 999999999999888743 235788999999999999999999987 99999999999999999999999999876
Q ss_pred cccCccccccccccccccccccccccCCC--CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 587 FRKDVDEANTGRIVGTYGYVPPEYVKKGI--YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
+..... .......++..|+|||.+.+.. .+.++|+||||+++|||++|+.||..
T Consensus 155 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 155 FLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred cccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 543321 1222346788999999987654 78899999999999999999999864
No 382
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=7.2e-28 Score=252.52 Aligned_cols=200 Identities=23% Similarity=0.372 Sum_probs=165.1
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC-----Cc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTER-----DE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 505 (656)
.++|++.+.||+|+||+||++.. .+++.||||.+... .......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788999999999999999954 56899999998753 223345677899999999999999999987644 24
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++++||+. ++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999996 677777643 345899999999999999999999987 9999999999999999999999999998
Q ss_pred ccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...... .......++..|+|||.+.. ..++.++|+|||||++|+|++|+.||...
T Consensus 157 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 157 TTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred ccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 654321 11223357889999998764 46889999999999999999999999653
No 383
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=4.1e-27 Score=244.15 Aligned_cols=194 Identities=30% Similarity=0.435 Sum_probs=162.5
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
|...+.||+|+||.||+|.. .+++.+++|++.... ....+.+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 56678899999999999965 468899999986532 23345688899999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+. +++..++.. ....+++.++..++.|++.++.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 466665533 2345889999999999999999999987 99999999999999999999999999864221
Q ss_pred cccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+. ...++.++|||||||++|||++|+.|+...
T Consensus 174 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~ 223 (313)
T cd06633 174 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 223 (313)
T ss_pred ---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 12346788999999874 456888999999999999999999998543
No 384
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=1.6e-27 Score=250.37 Aligned_cols=195 Identities=25% Similarity=0.383 Sum_probs=161.7
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD------ 504 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 504 (656)
.++|...+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999964 468999999986532 223356789999999999999999999886543
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..++|+||+.. +|..+. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 45899999864 665543 234788999999999999999999987 999999999999999999999999998
Q ss_pred cccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~ 218 (342)
T cd07879 165 RHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218 (342)
T ss_pred cCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 754221 122356788999998866 45889999999999999999999999754
No 385
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=1.7e-27 Score=249.62 Aligned_cols=203 Identities=22% Similarity=0.324 Sum_probs=164.2
Q ss_pred hcCCCC-CCcccccCceEEEEEEe-CCCCEEEEEEccCCChhh--------------HHHHHHHHHHHHhcCCCceeeEE
Q 006211 434 TNNFSS-ANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQG--------------LEEFKNEVSLTARLQHVNLLRVL 497 (656)
Q Consensus 434 ~~~y~~-~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~ 497 (656)
.++|.. .+.||+|+||.||+|.. ..++.||+|.++...... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 345554 46799999999999964 468899999886542211 12467899999999999999999
Q ss_pred EEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEE
Q 006211 498 GYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPK 577 (656)
Q Consensus 498 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~k 577 (656)
+++...+..+++|||+. ++|..++.. ...+++.....++.|++.+|.|||+.+ ++|+||+|+||+++.++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence 99999999999999997 578777743 345889999999999999999999987 99999999999999999999
Q ss_pred EEeccCccccccCc------------cccccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 578 ISDFGMAKLFRKDV------------DEANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 578 l~DfGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
|+|||++....... .........++..|+|||.+.+. .++.++|+|||||++|||++|+.||...+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999997654110 01111123467889999988654 46889999999999999999999986544
No 386
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=1.8e-27 Score=244.96 Aligned_cols=199 Identities=25% Similarity=0.422 Sum_probs=161.7
Q ss_pred cCCCCCCcccccCceEEEEEEeCC-CCEEEEEEccCCC-hhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATS-TQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 511 (656)
++|++.+.||+|++|.||+|.... ++.||||+++... ......+..|+.++.+.. ||||+++++++......+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999997754 8899999987543 233445667777676664 9999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+. +++..+.... ...+++..+..++.+++++|.|||+.+ +++||||+|+||++++++.+||+|||++..+....
T Consensus 95 ~~~-~~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 95 LMS-TCLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred ccC-cCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 985 4665555332 236889999999999999999999742 39999999999999999999999999997654322
Q ss_pred cccccccccccccccccccccCCC----CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVKKGI----YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.. ....++..|+|||.+.+.. ++.++|+||||+++|||++|+.||..
T Consensus 170 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 170 AK---TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred cc---cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 11 1235678899999987543 78899999999999999999999965
No 387
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.95 E-value=2.2e-27 Score=246.47 Aligned_cols=198 Identities=20% Similarity=0.209 Sum_probs=161.1
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCC
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.+.+|.|+++.|+++.. +++.||+|++... ..+..+.+.+|+.+++.++||||+++++++...+..+++|||++++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 344455556666666554 7899999998754 3445668899999999999999999999999999999999999999
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc----
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD---- 592 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~---- 592 (656)
+|..++.... ...+++.....++.|+++||.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 85 ~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 85 SCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 9999886432 234788999999999999999999987 99999999999999999999999998875432211
Q ss_pred -ccccccccccccccccccccC--CCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 593 -EANTGRIVGTYGYVPPEYVKK--GIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 593 -~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
........++..|+|||.+.. ..++.++|+|||||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 111123356778999999865 3578899999999999999999999964
No 388
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=2.8e-27 Score=247.15 Aligned_cols=198 Identities=22% Similarity=0.303 Sum_probs=160.4
Q ss_pred Cccccc--CceEEEEEEe-CCCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCC
Q 006211 441 NKLGEG--GFGPVYKGNL-PRGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 515 (656)
..||+| +||+||++.. ..++.||+|++.... .+..+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 8999999965 578999999987542 33456788999999999999999999999999999999999999
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc-
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA- 594 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~- 594 (656)
+++..++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 99998875432 234788999999999999999999987 9999999999999999999999998654322111100
Q ss_pred ----ccccccccccccccccccCC--CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 595 ----NTGRIVGTYGYVPPEYVKKG--IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 595 ----~~~~~~gt~~y~aPE~~~~~--~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 01112345679999998763 4788999999999999999999999654
No 389
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=3.5e-27 Score=241.35 Aligned_cols=199 Identities=25% Similarity=0.431 Sum_probs=162.9
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhc---CCCceeeEEEEEeeCCc-----
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARL---QHVNLLRVLGYCTERDE----- 505 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 505 (656)
|++.+.||+|+||.||++... +++.+|+|+++.... .....+.+|+.++.++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999765 489999999875422 1233456777776665 59999999999988776
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++++||+.+ +|..++.... ...+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 8999999974 7877764322 235899999999999999999999987 9999999999999999999999999997
Q ss_pred ccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
....... .....++..|+|||.+.+..++.++|+|||||++|||++|++||....
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~ 210 (287)
T cd07838 156 IYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTS 210 (287)
T ss_pred eccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCC
Confidence 6543211 122356788999999988889999999999999999999999886543
No 390
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95 E-value=2.1e-27 Score=242.43 Aligned_cols=199 Identities=26% Similarity=0.393 Sum_probs=167.2
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
|+..+.||+|++|.||++... +++.+++|++..... .....+.+|+.++++++|+|++++++++..+...++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999654 688999999876532 23457788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
++ ++..++... ...+++..+..++.+++++|.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-- 152 (283)
T cd05118 81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-- 152 (283)
T ss_pred CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence 75 777766442 246889999999999999999999987 9999999999999999999999999997664432
Q ss_pred cccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
.......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~ 203 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS 203 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 112223567889999988766 78999999999999999999999986543
No 391
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=1.4e-27 Score=250.87 Aligned_cols=200 Identities=23% Similarity=0.351 Sum_probs=163.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeC----------
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTER---------- 503 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------- 503 (656)
.+|+..+.||.|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++.+...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788899999999999999954 56889999998776656667788999999999999999998766543
Q ss_pred ----CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEE
Q 006211 504 ----DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKI 578 (656)
Q Consensus 504 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl 578 (656)
...++|+||++ ++|..++. ...+++.....++.|++.||.|||+.+ ++||||||+||+++. ++.++|
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE----QGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 34689999997 57877663 235789999999999999999999987 999999999999974 567899
Q ss_pred EeccCccccccCcccc-ccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 579 SDFGMAKLFRKDVDEA-NTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 579 ~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+|||+++......... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||...
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999997653321111 1122356888999997654 56788999999999999999999999643
No 392
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=9.3e-28 Score=257.27 Aligned_cols=203 Identities=24% Similarity=0.391 Sum_probs=173.3
Q ss_pred HHhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEee-----CC
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTE-----RD 504 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-----~~ 504 (656)
..++.|++.+.||.|.+|.||+++ ..+++..|+|++..... ..+++..|.++++.. .|||++.++|++.. .+
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 345667888999999999999994 45788999998876533 335678899999988 69999999999854 46
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
.+|||||||.+|+..+++.... ...+.|.....|++.++.|+.+||.+. ++|||||-.|||++.++.|||+|||.+
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvS 170 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVS 170 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeee
Confidence 8999999999999999987654 567899999999999999999999987 999999999999999999999999999
Q ss_pred cccccCccccccccccccccccccccccCC-----CCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 585 KLFRKDVDEANTGRIVGTYGYVPPEYVKKG-----IYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 585 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
..+... ..+....+||+.|||||++... .|+.++|+||||++..||--|.+|+-.
T Consensus 171 aQldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~D 230 (953)
T KOG0587|consen 171 AQLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCD 230 (953)
T ss_pred eeeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccC
Confidence 877653 3344556899999999998643 377899999999999999999999843
No 393
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=2e-27 Score=248.62 Aligned_cols=201 Identities=25% Similarity=0.376 Sum_probs=168.9
Q ss_pred CCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ceE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----ENM 507 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 507 (656)
+|++.+.||.|++|.||+|... +++.+|+|++.... ....+.+.+|+.+++.++||||+++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999654 48899999987643 334567889999999999999999999987765 789
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
++|||++ ++|..++.. ...+++..+..++.+++++|.+||+.+ ++||||||.|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999997 477777743 236899999999999999999999987 999999999999999999999999999865
Q ss_pred ccCccc-cccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 588 RKDVDE-ANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 588 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
...... .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~ 211 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD 211 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC
Confidence 443210 112234678899999999877 78999999999999999999999996543
No 394
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=3.4e-27 Score=244.26 Aligned_cols=195 Identities=30% Similarity=0.436 Sum_probs=162.9
Q ss_pred CCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
.|+..+.||+|++|.||+|.. .+++.+++|.+... .....+++.+|+++++.++|+|++++.+++......++|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 366678899999999999965 45788999988643 22334567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+. +++...+... ...+++.++..++.+++.++.|||+.+ ++||||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 96 YCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred ccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 996 5776665332 335789999999999999999999987 999999999999999999999999998764321
Q ss_pred ccccccccccccccccccccc---CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 592 DEANTGRIVGTYGYVPPEYVK---KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 592 ~~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
....++..|+|||.+. ...++.++|||||||++|||++|+.|+...
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 1235788999999874 356788999999999999999999998543
No 395
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=1.7e-27 Score=246.71 Aligned_cols=203 Identities=26% Similarity=0.424 Sum_probs=162.5
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATST--QGLEEFKNEVSLTARLQHVNLLRVLGYCTERD------ 504 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 504 (656)
.++|++.+.||+|++|.||+|.. .+++.+|+|++..... .....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46788999999999999999965 4688999998865422 22345678999999999999999998875433
Q ss_pred --ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEecc
Q 006211 505 --ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFG 582 (656)
Q Consensus 505 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfG 582 (656)
..++|+||+.+ ++...+... ...+++..+..++.|++++|.|||+.+ ++|+||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 45899999875 565555432 335899999999999999999999987 9999999999999999999999999
Q ss_pred CccccccCcccc---------ccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 583 MAKLFRKDVDEA---------NTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 583 la~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+++......... ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~ 230 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGK 230 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCC
Confidence 997654322111 1122356788999998765 45789999999999999999999998643
No 396
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=5.3e-27 Score=245.46 Aligned_cols=200 Identities=24% Similarity=0.333 Sum_probs=160.9
Q ss_pred CCCCCCcccccCceEEEEEEeC-C--CCEEEEEEccCCC--hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC----Cc
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP-R--GQEFAVKRLSATS--TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER----DE 505 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~~ 505 (656)
+|++.+.||+|+||.||++... . +..+|+|++.... ....+.+.+|+.++.++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999653 3 6789999986532 22345678899999999 599999999875432 35
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++++|++. ++|..++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678888885 678777743 345889999999999999999999987 9999999999999999999999999998
Q ss_pred ccccCccc--cccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 586 LFRKDVDE--ANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 586 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.+...... .......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 65432111 11223468899999998765 46889999999999999999999998653
No 397
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=4.5e-27 Score=240.13 Aligned_cols=198 Identities=25% Similarity=0.354 Sum_probs=164.1
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATST-QGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
|++.+.||+|++|+||+|... +++.++||++..... .......+|+..+.+++ |||++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999764 478899999865432 12223457899999998 999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
+++|..++.... ...+++..+..++.|++.+|.|||+++ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 788887775432 235799999999999999999999987 99999999999999999999999999976543211
Q ss_pred ccccccccccccccccccc-CCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVK-KGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
.....++..|+|||.+. ...++.++|+||||++++||++|+.||...
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 12235788899999874 455789999999999999999999998654
No 398
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=6.7e-27 Score=234.18 Aligned_cols=193 Identities=27% Similarity=0.383 Sum_probs=165.9
Q ss_pred ccccCceEEEEEEeC-CCCEEEEEEccCCCh---hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 443 LGEGGFGPVYKGNLP-RGQEFAVKRLSATST---QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 443 iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
||+|+||.||++... +++.+++|++..... .....+..|+.++++++|||++++++.+......+++||++++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999654 588999999876432 2455788999999999999999999999999999999999999999
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGR 598 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 598 (656)
.+++... ..+++.....++.|+++++.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~ 152 (250)
T cd05123 81 FSHLSKE---GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNT 152 (250)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccC
Confidence 9888532 35889999999999999999999987 9999999999999999999999999997654321 12233
Q ss_pred ccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 599 IVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 599 ~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
..++..|+|||.+.+...+.++|+||||+++|||++|+.||....
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 197 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED 197 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 467889999999988888999999999999999999999996543
No 399
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.95 E-value=5.5e-27 Score=239.27 Aligned_cols=198 Identities=28% Similarity=0.405 Sum_probs=166.8
Q ss_pred CCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 437 FSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
|+..+.||+|.+|.||+|... +++.+++|.+.... ....+.+..|+.++++++|+|++++++++......++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456788999999999999654 58999999987653 233456788999999999999999999999999999999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDE 593 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~ 593 (656)
+ ++|..++.... ..+++..+..++.+++++|.+||+.+ ++||||+|+||++++++.++|+|||++........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 58988885422 35889999999999999999999987 99999999999999999999999999976543221
Q ss_pred cccccccccccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 594 ANTGRIVGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 594 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
......++..|+|||.+... .++.++|||||||+++||++|+.||...
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 202 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD 202 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 12223456789999988766 7899999999999999999999998654
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.4e-29 Score=234.24 Aligned_cols=206 Identities=23% Similarity=0.367 Sum_probs=165.8
Q ss_pred CCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC-----ceEE
Q 006211 437 FSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD-----ENML 508 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 508 (656)
.+..+.||.|+||.||.++. .+|+.||.|.+... +-...+++-+|+++|..++|.|++..++...... +.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 44568899999999999954 56999999988653 2334567889999999999999999988765432 4577
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
++|.|. .+|..++.. ...++.....-+.+||++||+|||+.+ |.||||||.|.|++.|..+||||||+++...
T Consensus 135 ~TELmQ-SDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHH-hhhhheecc---CCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccc
Confidence 888885 467666643 345777888889999999999999998 9999999999999999999999999999765
Q ss_pred cCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccccc
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENLNF 650 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~~~ 650 (656)
.+.....+ .-+-|..|.|||++.+ ..|+...||||.||++.||+..+--|...+.-+.+.+
T Consensus 208 ~d~~~hMT-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~l 269 (449)
T KOG0664|consen 208 QRDRLNMT-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQM 269 (449)
T ss_pred hhhhhhhH-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHH
Confidence 44333333 3356889999999876 5689999999999999999999988876665554443
No 401
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=1.2e-27 Score=264.27 Aligned_cols=199 Identities=31% Similarity=0.484 Sum_probs=156.3
Q ss_pred HHhcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC-ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee-------
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT-STQGLEEFKNEVSLTARLQHVNLLRVLGYCTE------- 502 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 502 (656)
+-.++|+.++.||+|+||.||+++. -+|+.||||++... +.+....+.+|+..+.+|+|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 4456788889999999999999953 48999999998765 33445678899999999999999986532100
Q ss_pred --------------------------------------------------------------------------------
Q 006211 503 -------------------------------------------------------------------------------- 502 (656)
Q Consensus 503 -------------------------------------------------------------------------------- 502 (656)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHH
Q 006211 503 ------------------------R--------DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL 550 (656)
Q Consensus 503 ------------------------~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L 550 (656)
+ ..+||-||||+..++..++.+.... -.....++++.+|++||.|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHH
Confidence 0 1236788888888887777432211 14577899999999999999
Q ss_pred HhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc---c-------------CccccccccccccccccccccccCC
Q 006211 551 QEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR---K-------------DVDEANTGRIVGTYGYVPPEYVKKG 614 (656)
Q Consensus 551 h~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~---~-------------~~~~~~~~~~~gt~~y~aPE~~~~~ 614 (656)
|+++ +|||||||.||+++++..|||+|||++.... . .......+..+||.-|+|||++.+.
T Consensus 714 H~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~ 790 (1351)
T KOG1035|consen 714 HDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDT 790 (1351)
T ss_pred HhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccc
Confidence 9998 9999999999999999999999999998621 0 0111123346899999999999765
Q ss_pred C---CCccchhHHHHHHHHHHHcC
Q 006211 615 I---YSMKYDVYSFGVLLLQIISS 635 (656)
Q Consensus 615 ~---~s~~sDvwslGvil~elltg 635 (656)
. |+.|+|+||||+|++||+.-
T Consensus 791 ~~~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 791 SSNKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred ccccccchhhhHHHHHHHHHHhcc
Confidence 4 99999999999999999853
No 402
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=6.3e-27 Score=261.10 Aligned_cols=203 Identities=27% Similarity=0.401 Sum_probs=167.3
Q ss_pred hcCCCCCCcccccCceEEEEEEeC--------CCCEEEEEEccCCC-hhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeC
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP--------RGQEFAVKRLSATS-TQGLEEFKNEVSLTARL-QHVNLLRVLGYCTER 503 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 503 (656)
.++..+.+.||+|.||.|++|... ....||||.++... ..+.+.+..|+++|+.+ +|+|++.++|+|..+
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~ 374 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD 374 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence 344456679999999999999532 14579999998653 34567899999999999 599999999999999
Q ss_pred CceEEEEEecCCCChhhhhhCCC-----c------C--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEE
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPI-----R------R--YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILL 570 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~-----~------~--~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl 570 (656)
...++|.||++.|+|..++.... . . ..++..+.+.++.||+.||+||++.+ ++||||..+|||+
T Consensus 375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLI 451 (609)
T ss_pred CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEe
Confidence 99999999999999999997644 0 0 23889999999999999999999987 9999999999999
Q ss_pred cCCCcEEEEeccCccccccCcccc-ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 571 DNELNPKISDFGMAKLFRKDVDEA-NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 571 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
.++..+||+|||+++......... ..+...-+..|||||.+....|+.++||||||++|||++|...+.
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P 521 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP 521 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence 999999999999998654332221 111111355799999999999999999999999999999976554
No 403
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=6.8e-27 Score=235.77 Aligned_cols=200 Identities=28% Similarity=0.401 Sum_probs=163.0
Q ss_pred CCCCCCcccccCceEEEEEEeCC-CCEEEEEEccCC-----ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSAT-----STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
+|.+.+.||+|+||.||++.... +..+++|.++.. .......+..|+.++++++|||++++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999996543 444555555432 122233567789999999999999999999988899999
Q ss_pred EEecCCCChhhhhhCC-CcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 510 YEYLPNKSLDLYLFDP-IRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
+||+++++|..++... .....+++..+..++.|++++|.|||+.+ ++|+||+|+||+++.+ .++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~~-~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKNN-LLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeecC-CEeecccCceeecC
Confidence 9999999998887532 23346899999999999999999999987 9999999999999864 69999999997654
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.... ......++..|+|||.+....++.++|+||||+++|+|++|+.||..
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3221 12234578899999998888889999999999999999999999853
No 404
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=4.3e-27 Score=247.21 Aligned_cols=197 Identities=24% Similarity=0.367 Sum_probs=164.9
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc----
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE---- 505 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 505 (656)
..++|+..+.||+|++|.||+|... +++.||+|++... .....+.+.+|+.+++.++|||++++.+++.....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4568899999999999999999664 5789999998653 22334567789999999999999999987765554
Q ss_pred --eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 506 --NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 506 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
.++|+||+ +++|..++.. ..+++..+..++.|++++|.|||+.+ ++||||+|+||++++++.++|+|||+
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccc
Confidence 89999998 6688877743 35899999999999999999999987 99999999999999999999999999
Q ss_pred ccccccCccccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 584 AKLFRKDVDEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 584 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
+...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~ 219 (343)
T cd07851 165 ARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS 219 (343)
T ss_pred ccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9765322 122356788999998765 46788999999999999999999999644
No 405
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.94 E-value=6.1e-28 Score=236.90 Aligned_cols=210 Identities=22% Similarity=0.305 Sum_probs=174.1
Q ss_pred HhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC--CC----ceeeEEEEEeeCCc
Q 006211 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ--HV----NLLRVLGYCTERDE 505 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~----niv~l~~~~~~~~~ 505 (656)
..++|.+++.+|+|.||.|-++ +...+..||||+++... ...+.-+-|++++.++. .| -++.+.++|.-.+.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 4789999999999999999999 44457899999987652 33455577999999993 22 37888899999999
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-------------
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN------------- 572 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~------------- 572 (656)
.|||+|.+ |-|+.+++.+. .-.+.+....+.++.|+++++++||++. ++|.||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred eEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCcc
Confidence 99999987 56888888553 2335788899999999999999999998 999999999999842
Q ss_pred -------CCcEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 573 -------ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 573 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
+..++|+|||.|..-. .....++.|..|.|||++.+-.++..+||||+||||.||.||..-|...++-
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~-----e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDH-----EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ceeccCCCcceEEEecCCcceec-----cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 2458999999997532 2235678899999999999999999999999999999999999999888776
Q ss_pred cccccccc
Q 006211 646 ENLNFLEY 653 (656)
Q Consensus 646 ~~~~~~~~ 653 (656)
|.+.+++.
T Consensus 316 EHLaMMer 323 (415)
T KOG0671|consen 316 EHLAMMER 323 (415)
T ss_pred HHHHHHHH
Confidence 76666554
No 406
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=2e-26 Score=260.92 Aligned_cols=145 Identities=27% Similarity=0.389 Sum_probs=128.6
Q ss_pred cCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
++|++.++||+|+||.||+|... +++.||||+++... ......+..|+.++..++||||+++++.+......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999654 68899999987542 233457888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
||+++++|..++.. ...+++..++.++.||+.||.|||..+ |+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999988853 234788899999999999999999987 9999999999999999999999999886
No 407
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=1.4e-26 Score=230.15 Aligned_cols=180 Identities=18% Similarity=0.147 Sum_probs=151.1
Q ss_pred cCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChhhhhhC
Q 006211 446 GGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD 524 (656)
Q Consensus 446 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 524 (656)
|.+|.||++.. .+++.+|+|++..... +.+|...+....|||++++++++...+..+++|||+++++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE-----YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh-----hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999954 5688999999876532 23344455556799999999999999999999999999999888753
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccccccccc
Q 006211 525 PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604 (656)
Q Consensus 525 ~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~ 604 (656)
. ..+++.....++.|+++||.|||+.+ ++||||||+||+++.++.++++|||.+....... ....++..
T Consensus 79 ~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~ 147 (237)
T cd05576 79 F---LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENM 147 (237)
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCcc
Confidence 2 34889999999999999999999987 9999999999999999999999999886543221 12245677
Q ss_pred ccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 605 y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
|+|||.+....++.++|+||+|+++|||++|+.|+..
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 9999999888889999999999999999999988754
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5e-27 Score=245.32 Aligned_cols=196 Identities=25% Similarity=0.348 Sum_probs=163.2
Q ss_pred hcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++.|.....+|.|+|+.|..+ ...+++..++|++..... +..+|+.++... +|||++++.+.+.+....++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 567788888999999999998 456788999999977622 234566565555 79999999999999999999999
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEE-cCCCcEEEEeccCccccccC
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILL-DNELNPKISDFGMAKLFRKD 590 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl-~~~~~~kl~DfGla~~~~~~ 590 (656)
.+.++.+...+.. . .....++..|+.+|+.++.|||+.| ++||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~---~-~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRS---K-PEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHh---c-chhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 9999888666532 1 2222677789999999999999987 9999999999999 58899999999999876543
Q ss_pred ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 591 VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 591 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
....+-|..|.|||++....+++++|+||||++||+||+|+.||......
T Consensus 470 -----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~ 519 (612)
T KOG0603|consen 470 -----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG 519 (612)
T ss_pred -----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence 12235578999999999999999999999999999999999999765544
No 409
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=4.7e-26 Score=245.25 Aligned_cols=203 Identities=24% Similarity=0.370 Sum_probs=150.9
Q ss_pred hcCCCCCCcccccCceEEEEEEe-----------------CCCCEEEEEEccCCChhhHHHH--------------HHHH
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-----------------PRGQEFAVKRLSATSTQGLEEF--------------KNEV 482 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e~ 482 (656)
.++|++.++||+|+||.||+|.. ..++.||||++........++| ..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999843 2356799999875433222222 3466
Q ss_pred HHHHhcCCCce-----eeEEEEEee--------CCceEEEEEecCCCChhhhhhCCC---------------------cC
Q 006211 483 SLTARLQHVNL-----LRVLGYCTE--------RDENMLIYEYLPNKSLDLYLFDPI---------------------RR 528 (656)
Q Consensus 483 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------~~ 528 (656)
.++.+++|.++ ++++++|.. ....++|+||+++++|.+++.... ..
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 67777766554 667777653 356799999999999998875321 11
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccccccccccccc
Q 006211 529 YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPP 608 (656)
Q Consensus 529 ~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 608 (656)
..+++..+..++.|++++|.|||+.+ ++||||||+|||++.++.+||+|||++........ .......+++.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeCh
Confidence 23467788899999999999999987 99999999999999999999999999975433211 111122347899999
Q ss_pred ccccCCCC----------------------CccchhHHHHHHHHHHHcCCC-CCC
Q 006211 609 EYVKKGIY----------------------SMKYDVYSFGVLLLQIISSKR-NAR 640 (656)
Q Consensus 609 E~~~~~~~----------------------s~~sDvwslGvil~elltg~~-p~~ 640 (656)
|.+..... ..+.||||+||+++||+++.. |+.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 98753321 124699999999999999875 553
No 410
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.8e-28 Score=227.10 Aligned_cols=204 Identities=22% Similarity=0.418 Sum_probs=162.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEee--------C
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTE--------R 503 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 503 (656)
..|+...+||+|.||+||+|+. ++++.||+|..-.+ .+.--...++|+.+|..++|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 3456678899999999999955 45778898865432 22223345889999999999999999887743 2
Q ss_pred CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccC
Q 006211 504 DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGM 583 (656)
Q Consensus 504 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGl 583 (656)
...++|+++|+. +|.-++.+. ...++..++.+++.++..||.|+|.+. |+|||+||.|+||+.++.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence 347899999965 566666543 234788899999999999999999987 99999999999999999999999999
Q ss_pred ccccccCc--cccccccccccccccccccccC-CCCCccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 584 AKLFRKDV--DEANTGRIVGTYGYVPPEYVKK-GIYSMKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 584 a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
++.+.... ........+-|..|.+||.+.+ ..|+++.|||..||++.||.|+.+-+.....
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte 234 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE 234 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH
Confidence 98664432 2233444566999999998765 6699999999999999999999987765443
No 411
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.7e-27 Score=240.60 Aligned_cols=196 Identities=24% Similarity=0.381 Sum_probs=164.1
Q ss_pred cCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChh--------hHHHHHHHHHHHHhcC---CCceeeEEEEEee
Q 006211 435 NNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQ--------GLEEFKNEVSLTARLQ---HVNLLRVLGYCTE 502 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 502 (656)
..|...+.+|+|+||.|+.|.. .+...|+||.+.+++-- ..-.+-.|+.||..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 4588899999999999999954 45678999988765321 1112556999999997 9999999999999
Q ss_pred CCceEEEEEecC-CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEec
Q 006211 503 RDENMLIYEYLP-NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDF 581 (656)
Q Consensus 503 ~~~~~lv~e~~~-~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~Df 581 (656)
++..+|+||-.. +-+|.+++ ..+..+++.++..|++|++.|+++||+++ |||||||-+|+.++.+|-+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeec
Confidence 999999999763 44566666 34556999999999999999999999998 999999999999999999999999
Q ss_pred cCccccccCccccccccccccccccccccccCCCC-CccchhHHHHHHHHHHHcCCCCCC
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIY-SMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwslGvil~elltg~~p~~ 640 (656)
|.+...... .....+||..|.|||++.+..| ...-|||++|++||.++....||.
T Consensus 715 gsaa~~ksg----pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSG----PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCC----CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999765433 2335689999999999998887 456899999999999999888874
No 412
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.2e-25 Score=219.03 Aligned_cols=199 Identities=30% Similarity=0.457 Sum_probs=170.2
Q ss_pred CCCCCcccccCceEEEEEEeCC-CCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecC
Q 006211 437 FSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
|+..+.||+|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+++++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999997654 889999999876544 56788999999999999999999999998899999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+++|..++..... .+++.....++.+++.++.+||+.+ ++|+||+|.||+++.++.++|+|||.+.........
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~- 154 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA- 154 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence 9999988854221 1788999999999999999999986 999999999999999999999999999876543211
Q ss_pred ccccccccccccccccc-cCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYV-KKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~-~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
......++..|++||.+ ....++.++|+|+||++++||++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22234677889999998 667788899999999999999999999954
No 413
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=3.2e-26 Score=244.38 Aligned_cols=197 Identities=26% Similarity=0.390 Sum_probs=158.8
Q ss_pred CCCCCcccccCceE-EEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEEEecC
Q 006211 437 FSSANKLGEGGFGP-VYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 437 y~~~~~iG~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
|...+.+|.|+.|+ ||+|.. +++.||||++-.+. ....++|+..|+.- +||||+++++.-.++...||..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44457799999976 789987 68899999985543 23557899999988 5999999998888889999999999
Q ss_pred CCChhhhhhCCCcC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC---C--CcEEEEeccCccccc
Q 006211 515 NKSLDLYLFDPIRR-YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN---E--LNPKISDFGMAKLFR 588 (656)
Q Consensus 515 ~g~L~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~---~--~~~kl~DfGla~~~~ 588 (656)
..+|++++...... ........+.+..|++.||++||+.+ ||||||||+||||+. + ..++|+|||+++.+.
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 56899988553111 11111445788999999999999987 999999999999976 3 468999999999876
Q ss_pred cCccc-cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcC-CCCCCC
Q 006211 589 KDVDE-ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISS-KRNARY 641 (656)
Q Consensus 589 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg-~~p~~~ 641 (656)
.+... .......||-+|+|||++....-+..+|||||||++|+.++| +.||..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 55333 234556799999999999988888899999999999999998 888853
No 414
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.92 E-value=3.8e-25 Score=244.45 Aligned_cols=199 Identities=23% Similarity=0.317 Sum_probs=138.8
Q ss_pred HhcCCCCCCcccccCceEEEEEEeC-C----CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEE------Ee
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLP-R----GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGY------CT 501 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~ 501 (656)
..++|+..+.||+|+||.||+|... + +..||+|++...... +....| .+....+.++..+... +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 3467889999999999999999654 4 689999987653321 111111 1111222222222111 24
Q ss_pred eCCceEEEEEecCCCChhhhhhCCCcC-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccC
Q 006211 502 ERDENMLIYEYLPNKSLDLYLFDPIRR-----------------YVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLK 564 (656)
Q Consensus 502 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dik 564 (656)
.....++|+||+++++|.+++...... .......+..++.|++.+|.|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 566789999999999998887542211 01123345679999999999999987 9999999
Q ss_pred CCCEEEcC-CCcEEEEeccCccccccCccccccccccccccccccccccCC----------------------CCCccch
Q 006211 565 ASNILLDN-ELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG----------------------IYSMKYD 621 (656)
Q Consensus 565 p~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~~sD 621 (656)
|+|||+++ ++.+||+|||+++.+..... .......+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999996 57899999999986543221 223345789999999965322 2334569
Q ss_pred hHHHHHHHHHHHcCCCCC
Q 006211 622 VYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 622 vwslGvil~elltg~~p~ 639 (656)
||||||++|||+++..|.
T Consensus 362 VwSlGviL~el~~~~~~~ 379 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRS 379 (566)
T ss_pred cHHHHHHHHHHHhCcCCC
Confidence 999999999999976554
No 415
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.92 E-value=1.5e-24 Score=215.41 Aligned_cols=186 Identities=29% Similarity=0.410 Sum_probs=162.3
Q ss_pred CceEEEEEEeC-CCCEEEEEEccCCChhh-HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChhhhhhC
Q 006211 447 GFGPVYKGNLP-RGQEFAVKRLSATSTQG-LEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFD 524 (656)
Q Consensus 447 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 524 (656)
+||.||+|... +++.+++|++....... .+.+.+|++.+++++|+|++++++.+......++++|++++++|..++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999765 48999999998765444 67889999999999999999999999998999999999999999988854
Q ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccccccccccccc
Q 006211 525 PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYG 604 (656)
Q Consensus 525 ~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~ 604 (656)
.. .+++.....++.++++++.+||+.+ ++|+||+|+||++++++.++|+|||.+....... ......++..
T Consensus 81 ~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~ 151 (244)
T smart00220 81 RG---RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPE 151 (244)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcC
Confidence 22 2788999999999999999999987 9999999999999999999999999998654332 2223467888
Q ss_pred ccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 605 YVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 605 y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
|++||.+....++.++|+||||+++++|++|+.||..
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999888889999999999999999999999865
No 416
>KOG2091 consensus Predicted member of glycosyl hydrolase family 18 [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.5e-24 Score=205.64 Aligned_cols=289 Identities=12% Similarity=0.172 Sum_probs=220.8
Q ss_pred EEEEEecCCC--CCCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCCCccc
Q 006211 28 IKAGYWLAGR--EFPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQ 105 (656)
Q Consensus 28 ~~~~y~~~~~--~~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~ 105 (656)
.+-||...|+ +|+++.|-.+++|||...+..+...|..+..... .+.-...++++|+++++++++.-+
T Consensus 80 ~vLayVTPWNs~Gydvakifaskft~iSPVW~ql~~qgs~~~v~G~-hdid~gwiralRk~~~~l~ivPR~--------- 149 (392)
T KOG2091|consen 80 TVLAYVTPWNSHGYDVAKIFASKFTYISPVWLQLKDQGSDVGVYGK-HDIDPGWIRALRKSGKDLHIVPRF--------- 149 (392)
T ss_pred ceEEEecCcCccchhHHHHHhcccceecchheeehhcCcceEEeec-ccCChHHHHHHHHhCCCceeecee---------
Confidence 3578887665 6999999999999999999999876644443333 334455668899999999988776
Q ss_pred cccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceee-eeCCCc-cCcchHHHHHHHHHhhcCCCCCcEEEE
Q 006211 106 SILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLF-WLWPNS-TDLNSLGILLDEWKASASDQPELTLSM 183 (656)
Q Consensus 106 ~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdid-we~p~~-~d~~~~~~ll~~lr~~l~~~~~~~ls~ 183 (656)
.|..+. ...|..++.+++.|++..+.++++++++||||+.++ |..-.. -+......|++.|.++++ +..++...
T Consensus 150 -~fd~~~--~~d~ke~l~ke~l~ekv~~tlv~~ck~~~fdGlVlevwsq~a~~i~d~~al~~v~hl~k~Lh-kq~l~~iL 225 (392)
T KOG2091|consen 150 -YFDEFT--SADLKEFLVKEALREKVGQTLVNFCKKHGFDGLVLEVWSQLADVIADKDALELVEHLGKALH-KQELQAIL 225 (392)
T ss_pred -hhhhcc--chHHHHHhhhHHHHHHHHHHHHHHHHHcCCCeeeHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HhheEEEE
Confidence 334433 334789999999999999999999999999999998 643222 112445577888888884 34666777
Q ss_pred EeecCCC--ccccc----cChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCCcee
Q 006211 184 AVRYSPT--HETVS----YPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPANKLV 257 (656)
Q Consensus 184 a~~~~~~--~~~~~----~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~Kl~ 257 (656)
.+|+... +.+.. =++..|.+.+|.+.+|||||.++ ..+|++||++ +++.++....-...-+.|+.
T Consensus 226 vvPp~~~~e~~~~~~ft~ee~~~L~~~~d~fsLmTYd~s~~---~~pg~nap~~------wi~~~l~~l~~~s~~r~KiL 296 (392)
T KOG2091|consen 226 VVPPVIEEENGQLKFFTPEEFSKLVAVYDGFSLMTYDYSLV---QGPGPNAPLE------WIRHCLHHLGGSSAKRPKIL 296 (392)
T ss_pred EeCCCCcCCCCCcCcCCHHHHHHHHHhhhheeEEEeecccc---cCCCCCCCHH------HHHHHHHHhCCcccccccee
Confidence 7776322 22221 26789999999999999999843 4689999998 88999988776666779999
Q ss_pred ecccCCCCCcCC---CCCcchHHHHHHHHhcCCCcccccccceeeeee-----ecCcEEEeeCCcchhHHHHhhhhhccc
Q 006211 258 LGARASGPGITI---DGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLF-----TSGATWINFDGVETIKAKISYAKEKNL 329 (656)
Q Consensus 258 lG~p~yG~~~~~---~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~-----~~~~~~i~yd~~~si~~K~~~~~~~gl 329 (656)
+|+.|||..+.. .+.++.....+.++... -.-.||+.+...+. .++++-|.|.+..|+..+.++|++.|.
T Consensus 297 lGlNFYG~d~~~gdg~~~IT~~rYL~lLk~~k--~~~~~Dees~EH~f~~k~n~~gkhivfyPTL~Sl~~Ri~lA~~~gv 374 (392)
T KOG2091|consen 297 LGLNFYGNDFNLGDGGEAITAKRYLQLLKGEK--SVFKFDEESKEHFFEYKRNDDGKHIVFYPTLTSLELRIELARELGV 374 (392)
T ss_pred EeeeccccccccCCCCCceeHHHHHHHHhccC--cceeeccccchhheeeeccCCCceEEEecchHhHHHHHHHHHHhCC
Confidence 999999999977 35666666666666554 45567877765542 235899999999999999999999996
Q ss_pred ccceeeEeccCcc
Q 006211 330 LGYKAFQLSNDDN 342 (656)
Q Consensus 330 gGv~~W~l~~Dd~ 342 (656)
||++|+++|-=+
T Consensus 375 -gISIWe~GqGLD 386 (392)
T KOG2091|consen 375 -GISIWEYGQGLD 386 (392)
T ss_pred -ceEeeeccCchh
Confidence 999999998543
No 417
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=99.91 E-value=1.1e-23 Score=210.86 Aligned_cols=228 Identities=13% Similarity=0.128 Sum_probs=161.6
Q ss_pred EEEEEecCCCC------CCCCCCCCCCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCceEEEEeecCCC
Q 006211 28 IKAGYWLAGRE------FPLSDINSALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIKTLLSIWNGQN 101 (656)
Q Consensus 28 ~~~~y~~~~~~------~~~~~i~~~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~kvl~sigg~~~ 101 (656)
+..|||..|.. ..+.++| +.+++|++.++.++.++... ...........+..+|++ ++||++|||
T Consensus 2 ~~~~y~~~~~~~~~~~~~~l~~~p-ds~D~v~lf~~~~~~~~~~~--~~~~~~~~~~~i~~l~~k--G~KVl~sig---- 72 (255)
T cd06542 2 ISFGYFEVWDDKGASLQESLLNLP-DSVDMVSLFAANINLDAATA--VQFLLTNKETYIRPLQAK--GTKVLLSIL---- 72 (255)
T ss_pred eEEEEEEecCCcCcccccccccCC-CcceEEEEcccccCcccccc--hhhhhHHHHHHHHHHhhC--CCEEEEEEC----
Confidence 46789988764 4666777 55888888444444331110 111223344555556665 799999994
Q ss_pred CccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc-------cCcchHHHHHHHHHhhcC
Q 006211 102 STYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-------TDLNSLGILLDEWKASAS 174 (656)
Q Consensus 102 ~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~-------~d~~~~~~ll~~lr~~l~ 174 (656)
|+..... | ....+++.|++|++++++++++|||||||||||+|.. .+.++|..|+++||++++
T Consensus 73 --------g~~~~~~-~-~~~~~~~~~~~fa~~l~~~v~~yglDGiDiD~E~~~~~~~~~~~~~~~~~~~lv~~Lr~~~~ 142 (255)
T cd06542 73 --------GNHLGAG-F-ANNLSDAAAKAYAKAIVDTVDKYGLDGVDFDDEYSGYGKNGTSQPSNEAFVRLIKELRKYMG 142 (255)
T ss_pred --------CCCCCCC-c-cccCCHHHHHHHHHHHHHHHHHhCCCceEEeeeecccCCCCCCcchHHHHHHHHHHHHHHhC
Confidence 4433322 3 3566788999999999999999999999999999864 367899999999999994
Q ss_pred CCCCcEEEEEeecCCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 006211 175 DQPELTLSMAVRYSPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFGIREWLRRGFPAN 254 (656)
Q Consensus 175 ~~~~~~ls~a~~~~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~v~~~~~~g~p~~ 254 (656)
+ .+++|++++++..... +.+++.+++||+++|+||-. +...+. + ......|+|++
T Consensus 143 ~-~~kllt~~~~~~~~~~----~~~~~~~~vDyv~~~~y~~~----~~~~~~----~------------~~~~~~g~~~~ 197 (255)
T cd06542 143 P-TDKLLTIDGYGQALSN----DGEEVSPYVDYVIYQYYGSS----SSSTQR----N------------WNTNSPKIPPE 197 (255)
T ss_pred c-CCcEEEEEecCCchhc----CHHHHHHhCCEEEeeccCCC----CccCCc----c------------cccccCCCCHH
Confidence 3 4789999987654322 67999999999999999854 221111 0 01113589999
Q ss_pred ceeecccCCCCCcCCCCCcchHHHHHHHHhcCCCcccccccceeeeeeecCcEEEeeCCcchhHHHHhhhhhc-ccccce
Q 006211 255 KLVLGARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKAKISYAKEK-NLLGYK 333 (656)
Q Consensus 255 Kl~lG~p~yG~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~yd~~~si~~K~~~~~~~-glgGv~ 333 (656)
|+++|+++++.... .+..++...++++.+. +.||+|
T Consensus 198 k~i~~~~~~~~~~~-------------------------------------------~~~~~~~~~A~~~~~~~~~gG~~ 234 (255)
T cd06542 198 KMVYTESFEEENGG-------------------------------------------NSGSSAEQYARWTPAKGGKGGIG 234 (255)
T ss_pred HceeeeeeecccCC-------------------------------------------CcchhHHHHHhcCcccCceEEEE
Confidence 99999999973111 2344556677778777 999999
Q ss_pred eeEeccCcc
Q 006211 334 AFQLSNDDN 342 (656)
Q Consensus 334 ~W~l~~Dd~ 342 (656)
+|.++.|-.
T Consensus 235 ~y~~~~dy~ 243 (255)
T cd06542 235 TYALDRDYY 243 (255)
T ss_pred EEecCCCcc
Confidence 999999864
No 418
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=2.4e-25 Score=208.63 Aligned_cols=194 Identities=19% Similarity=0.345 Sum_probs=154.9
Q ss_pred hcCCCCCCcccccCceEEEEEEe-CCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEE-EEeeCCceEEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLG-YCTERDENMLIY 510 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~-~~~~~~~~~lv~ 510 (656)
.+.|.+.+.||+|.||.+-++.. +..+.+++|-+..+.. ..++|.+|..---.| .|.||+.-++ .|+..+..++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 45688889999999999999955 4577899998877543 356788888765555 5889988765 467778888999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc--CCCcEEEEeccCccccc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD--NELNPKISDFGMAKLFR 588 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~--~~~~~kl~DfGla~~~~ 588 (656)
||++.|+|..-+ ....+.+.....++.|+++|+.|+|+.+ +||||||.+||||- +...+||||||+.+...
T Consensus 102 E~aP~gdL~snv----~~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 102 EFAPRGDLRSNV----EAAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred ccCccchhhhhc----CcccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence 999999997665 3345788899999999999999999998 99999999999994 33479999999997644
Q ss_pred cCccccccccccccccccccccccCC-----CCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKG-----IYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
...... .-+..|.+||..... ...+.+|+|.||++++..|||+.||+
T Consensus 175 ~tV~~~-----~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 175 TTVKYL-----EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred ceehhh-----hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 322221 234579999976422 24678999999999999999999997
No 419
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.91 E-value=1.3e-25 Score=227.31 Aligned_cols=209 Identities=22% Similarity=0.258 Sum_probs=173.4
Q ss_pred HHHHhcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC------CCceeeEEEEEee
Q 006211 430 IKAATNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ------HVNLLRVLGYCTE 502 (656)
Q Consensus 430 ~~~~~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~ 502 (656)
.+....+|.+....|+|-|++|.+|. ...|+.||||++..... -.+.=+.|+++|++|. .-|+++++..|..
T Consensus 427 gE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 427 GELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 34566789999999999999999994 44588999999976422 2233467999999994 3479999999999
Q ss_pred CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEec
Q 006211 503 RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDF 581 (656)
Q Consensus 503 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~Df 581 (656)
.+++|||+|-+ .-+|.+.|.....+-.|....+..++.|+.-||..|..++ |+|.||||.|||+++.. .+|||||
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccC
Confidence 99999999987 4578888877777777888999999999999999999987 99999999999999764 5899999
Q ss_pred cCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCccc
Q 006211 582 GMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSEN 647 (656)
Q Consensus 582 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~ 647 (656)
|.|.....+ ..+. ..-+..|.|||++.+.+|++..|+||+||+||||.||+-.|.+.++..-
T Consensus 582 GSA~~~~en---eitP-YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M 643 (752)
T KOG0670|consen 582 GSASFASEN---EITP-YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM 643 (752)
T ss_pred ccccccccc---cccH-HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH
Confidence 999764322 1121 2335689999999999999999999999999999999999988776543
No 420
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.91 E-value=8.2e-25 Score=210.13 Aligned_cols=194 Identities=25% Similarity=0.332 Sum_probs=159.8
Q ss_pred cCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC------c
Q 006211 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD------E 505 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 505 (656)
.+|..++.+|.|.- .|..+ +.-.+++||+|.+..+ .....++..+|...+..+.|+|+++++.++.... .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46677788999988 55555 4457899999987654 2233456688999999999999999999987654 4
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++|||+|. .+|...+. ..++-.+...+..|+++|++|||+.+ |+||||||+||++..++.+||.|||+++
T Consensus 96 ~y~v~e~m~-~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhhh-hHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 689999994 56766653 23677889999999999999999998 9999999999999999999999999997
Q ss_pred ccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 586 LFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 586 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.-... ...+..+.+..|.|||++.+..+.+.+||||+||++.||++|+--|.+
T Consensus 167 ~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 167 TEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred ccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 54322 233445778899999999988899999999999999999999988864
No 421
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=99.90 E-value=2.5e-23 Score=208.59 Aligned_cols=149 Identities=15% Similarity=0.191 Sum_probs=118.5
Q ss_pred CCCccEEEEEEEEecCCCcEEecCCc---c-hhhHHHHHHHHHhhCCCceEEEEeecCCCCccccccCCcCCCccccccc
Q 006211 46 SALFTHLICAFAEVDSSTYQLSISSA---N-QQYFSIFANSVRRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSM 121 (656)
Q Consensus 46 ~~~~thi~~~f~~~~~~~~~~~~~~~---~-~~~~~~~~~~~k~~~~~~kvl~sigg~~~~~~~~~~Gg~~~~~~~f~~~ 121 (656)
...|+|+++||+....+ +....... . ...+...+..+|+++ +||+||+ |||.... |+.
T Consensus 23 ~~g~~~v~lAFi~~~~~-~~~~w~g~~~~~~~~~~~~~i~~lk~~G--~kViiS~------------GG~~g~~--~~~- 84 (294)
T cd06543 23 ATGVKAFTLAFIVASGG-CKPAWGGSYPLDQGGWIKSDIAALRAAG--GDVIVSF------------GGASGTP--LAT- 84 (294)
T ss_pred HcCCCEEEEEEEEcCCC-CcccCCCCCCcccchhHHHHHHHHHHcC--CeEEEEe------------cCCCCCc--ccc-
Confidence 46799999999988754 44443332 1 344556667888885 8999999 4444321 233
Q ss_pred cCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCccCc---chHHHHHHHHHhhcCCCCCcEEEEEeecCCCccc-cccC
Q 006211 122 VGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNSTDL---NSLGILLDEWKASASDQPELTLSMAVRYSPTHET-VSYP 197 (656)
Q Consensus 122 ~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~d~---~~~~~ll~~lr~~l~~~~~~~ls~a~~~~~~~~~-~~~~ 197 (656)
+...|++|++++.+++.+|+|||||||||+|...|+ +++..+|++|++++ +++.||+++|..+.... .+++
T Consensus 85 --~~~~~~~~~~a~~~~i~~y~~dgiDfDiE~~~~~d~~~~~~~~~al~~Lq~~~---p~l~vs~Tlp~~p~gl~~~g~~ 159 (294)
T cd06543 85 --SCTSADQLAAAYQKVIDAYGLTHLDFDIEGGALTDTAAIDRRAQALALLQKEY---PDLKISFTLPVLPTGLTPDGLN 159 (294)
T ss_pred --CcccHHHHHHHHHHHHHHhCCCeEEEeccCCccccchhHHHHHHHHHHHHHHC---CCcEEEEecCCCCCCCChhHHH
Confidence 678999999999999999999999999999988776 88999999999888 37889999998776554 6678
Q ss_pred hhhhhh----ccchhhhhhhcccC
Q 006211 198 IDSMKK----NLNWAHLVAYDYHM 217 (656)
Q Consensus 198 ~~~l~~----~vD~invmtYD~~g 217 (656)
+.+.++ .+|+||||||||++
T Consensus 160 ~l~~a~~~Gv~~d~VNiMtmDyg~ 183 (294)
T cd06543 160 VLEAAAANGVDLDTVNIMTMDYGS 183 (294)
T ss_pred HHHHHHHcCCCcceeeeeeecCCC
Confidence 899999 99999999999984
No 422
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.89 E-value=8.5e-24 Score=210.79 Aligned_cols=214 Identities=24% Similarity=0.379 Sum_probs=171.0
Q ss_pred HHHHhcCCCCCCcccccCceEEEEEEeC----CCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCC
Q 006211 430 IKAATNNFSSANKLGEGGFGPVYKGNLP----RGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERD 504 (656)
Q Consensus 430 ~~~~~~~y~~~~~iG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 504 (656)
+....+.|...++||+|.|++||++... ..+.||+|.+...+.. .++..|+++|..+ .+.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 3445677899999999999999999432 4678999998766443 5688999999999 5999999999999999
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEeccC
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGM 583 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~DfGl 583 (656)
...+|+||++.....++... ++...+..+++.+..||.++|+++ ||||||||.|+|.+.. +.-.|+|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 99999999999988888743 667889999999999999999998 9999999999999864 5678999999
Q ss_pred ccccccCc------c------------------------------------ccccccccccccccccccccC-CCCCccc
Q 006211 584 AKLFRKDV------D------------------------------------EANTGRIVGTYGYVPPEYVKK-GIYSMKY 620 (656)
Q Consensus 584 a~~~~~~~------~------------------------------------~~~~~~~~gt~~y~aPE~~~~-~~~s~~s 620 (656)
|....... . ........||++|.|||++.. ...+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97211000 0 000112469999999998865 4468899
Q ss_pred hhHHHHHHHHHHHcCCCCCCCCCCccccccccccc
Q 006211 621 DVYSFGVLLLQIISSKRNARYYGTSENLNFLEYAS 655 (656)
Q Consensus 621 DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~ 655 (656)
||||.|||++-+++++.||.. ..++...+.|.++
T Consensus 260 Diws~GVI~Lslls~~~PFf~-a~dd~~al~ei~t 293 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFK-AKDDADALAEIAT 293 (418)
T ss_pred ceeeccceeehhhcccccccc-CccccchHHHHHH
Confidence 999999999999999999943 4445555555443
No 423
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-24 Score=226.40 Aligned_cols=198 Identities=25% Similarity=0.408 Sum_probs=172.6
Q ss_pred hcCCCCCCcccccCceEEEEEE-eCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
.++|+.+.++|.|.||.||+++ ...++..|+|+++........-+++|+-+++..+||||+.+++-+...+..++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 3568889999999999999995 456889999999988777777788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
|.+|+|++.-+ .-.++++.+....+++..+++.|||+++ -+|||||-.|||+++.|.+|++|||.+-.+...
T Consensus 94 cgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat-- 165 (829)
T KOG0576|consen 94 CGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT-- 165 (829)
T ss_pred cCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh--
Confidence 99999987763 2456889999999999999999999998 799999999999999999999999999766532
Q ss_pred ccccccccccccccccccc---cCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 593 EANTGRIVGTYGYVPPEYV---KKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 593 ~~~~~~~~gt~~y~aPE~~---~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
-.......||+.|||||+- ..+.|..++|+|++|+...|+--.++|.
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqppl 215 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPL 215 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcc
Confidence 2233456899999999975 4567899999999999999998777775
No 424
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.89 E-value=4.8e-22 Score=192.50 Aligned_cols=183 Identities=36% Similarity=0.579 Sum_probs=156.5
Q ss_pred ccccCceEEEEEEeCC-CCEEEEEEccCCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChhh
Q 006211 443 LGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDL 520 (656)
Q Consensus 443 iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 520 (656)
||+|.+|.||++.... ++.+++|++...... ..+.+.+|+..++.++|++++++++++......++++|++++++|..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999997654 899999999876443 34678999999999999999999999999899999999999999999
Q ss_pred hhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-CCcEEEEeccCccccccCccccccccc
Q 006211 521 YLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-ELNPKISDFGMAKLFRKDVDEANTGRI 599 (656)
Q Consensus 521 ~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~ 599 (656)
++.... ..+++..+..++.++++++.+||+.+ ++|+||+|.||++++ ++.++|+|||.+........ .....
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 153 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTI 153 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcc
Confidence 885421 35788999999999999999999997 999999999999999 89999999999976543221 12223
Q ss_pred cccccccccccccCC-CCCccchhHHHHHHHHHH
Q 006211 600 VGTYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQI 632 (656)
Q Consensus 600 ~gt~~y~aPE~~~~~-~~s~~sDvwslGvil~el 632 (656)
.+...|++||.+... ..+.++|+|++|+++++|
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 567889999998877 788999999999999988
No 425
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.
Probab=99.88 E-value=7.1e-22 Score=196.68 Aligned_cols=237 Identities=17% Similarity=0.165 Sum_probs=150.0
Q ss_pred EEEEecCCC-CCCCCCC-CCCCccEEEEEEEEecCCCcE--EecCC--cch-----hhHHHHHHHHHhhCCCceEEEEee
Q 006211 29 KAGYWLAGR-EFPLSDI-NSALFTHLICAFAEVDSSTYQ--LSISS--ANQ-----QYFSIFANSVRRKNPSIKTLLSIW 97 (656)
Q Consensus 29 ~~~y~~~~~-~~~~~~i-~~~~~thi~~~f~~~~~~~~~--~~~~~--~~~-----~~~~~~~~~~k~~~~~~kvl~sig 97 (656)
++.||-... +-.+... +...++-|+++|+..-++++. +.+.. ... ..+...++.+++ +++|||||||
T Consensus 3 v~vyWGq~~~~~~L~~~C~~~~~dii~i~Fl~~~~~~~~p~~n~~~~c~~~~~~~c~~~~~dI~~cq~--~G~KVlLSIG 80 (280)
T cd02877 3 IAVYWGQNSDEGSLREYCDTGNYDIVNISFLNVFGSGGTPGLNFAGHCGGSTYPNCPQLGADIKHCQS--KGKKVLLSIG 80 (280)
T ss_pred eEEECCCCCCCCCHHHHhCCCCccEEEEEeEcccCCCCCcccCccccCcccccccchhHHHHHHHHHH--CCCEEEEEcc
Confidence 467873322 2222222 234588999999977654221 11111 111 245555555555 4799999995
Q ss_pred cCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHH------------HHcCCCcceeeeeCCCccCcchHHHH
Q 006211 98 NGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTA------------RLYGFQGIDLFWLWPNSTDLNSLGIL 165 (656)
Q Consensus 98 g~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~------------~~~~~DGvdidwe~p~~~d~~~~~~l 165 (656)
||+ .+.. | .+++.|++|++++.++. .+++|||||||||+|.. .+|..|
T Consensus 81 G~~------------~~~~-~----~s~~~a~~Fa~~l~~~~~~~~~~~~~rp~g~~~lDGiD~D~E~~~~---~~~~~l 140 (280)
T cd02877 81 GAG------------GSYS-L----SSDADAKDFADYLWNAFGGGTDSGVPRPFGDAVVDGFDFDIEHGSP---ENYDAL 140 (280)
T ss_pred CCC------------CCcC-C----CCHHHHHHHHHHHHHHhCCccccccccccccccccceEEecccCCc---cCHHHH
Confidence 444 3211 3 67899999999998875 26789999999999985 789999
Q ss_pred HHHHHhhcCCC--CCcEEEEEeecCCCccccccChhhhhh-ccchhhhhhhcccCCCCCCccccCCCCCCCCCCCCHHHH
Q 006211 166 LDEWKASASDQ--PELTLSMAVRYSPTHETVSYPIDSMKK-NLNWAHLVAYDYHMPSKENVTGIHAALYNPSSNISTDFG 242 (656)
Q Consensus 166 l~~lr~~l~~~--~~~~ls~a~~~~~~~~~~~~~~~~l~~-~vD~invmtYD~~g~~~~~~~g~~apl~~~~~~~~~~~~ 242 (656)
+++||+.+... +++.||+|++... ...+....+.. ++||||||.||..+.. ...+.++ .....
T Consensus 141 ~~~LR~~~~~~~~~~~~LTaAPq~~~---~d~~~~~~i~~~~~D~i~vqfYn~~~c~--~~~~~~~---------~~~~~ 206 (280)
T cd02877 141 AKRLRSLFASDPSKKYYLTAAPQCPY---PDASLGDAIATGLFDFIFVQFYNNPCCS--YASGNAS---------GFNFN 206 (280)
T ss_pred HHHHHHHhhcccCCceEEEeccccCC---cchhHHHHHccCccCEEEEEEecCcccc--ccccccc---------hhhhH
Confidence 99999999543 6799999966531 12233455654 9999999999975211 0011111 23445
Q ss_pred HHHHHHcCCCC---CceeecccCCCCCcCCCCCcchHHHHHHHHhcCCCcccccccceeeeeeecCcEEEeeCCcchhHH
Q 006211 243 IREWLRRGFPA---NKLVLGARASGPGITIDGSMGYKFIRAFIQNYGYGAAPVYNASYVVNLFTSGATWINFDGVETIKA 319 (656)
Q Consensus 243 v~~~~~~g~p~---~Kl~lG~p~yG~~~~~~g~~~y~~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~yd~~~si~~ 319 (656)
.+.|... +|. .||+||+|..-.. ...| |=+|..+..
T Consensus 207 ~~~w~~~-~~~~~~~kv~lGlpas~~a-a~~G---------------------------------------yv~p~~l~~ 245 (280)
T cd02877 207 WDTWTSW-AKATSNAKVFLGLPASPEA-AGSG---------------------------------------YVDPSELAS 245 (280)
T ss_pred HHHHHHh-cccCCCceEEEecccCCCC-CCCC---------------------------------------ccCHHHHHH
Confidence 6667654 555 8999999976421 1122 334444444
Q ss_pred HHhhh-hhc-ccccceeeEeccCcc
Q 006211 320 KISYA-KEK-NLLGYKAFQLSNDDN 342 (656)
Q Consensus 320 K~~~~-~~~-glgGv~~W~l~~Dd~ 342 (656)
-+..+ .+. ++||||+|++.+|..
T Consensus 246 ~v~~~~~~~~~fGGvM~Wd~~~~~~ 270 (280)
T cd02877 246 LVLPVKQKSPNFGGVMLWDASQDKQ 270 (280)
T ss_pred HHHHHhhcCCCCcEEEEEhHhhccC
Confidence 43333 233 699999999999985
No 426
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.2e-22 Score=203.06 Aligned_cols=132 Identities=23% Similarity=0.290 Sum_probs=108.0
Q ss_pred cCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC-----C---CceeeEEEEEee---
Q 006211 435 NNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-----H---VNLLRVLGYCTE--- 502 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~--- 502 (656)
.+|.+.++||.|-|++||++ +.++.+.||+|+.+.. ....+..+.||++|++++ | .+||+|+++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 67888999999999999999 5667889999998764 233455688999999983 3 369999999965
Q ss_pred -CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 503 -RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 503 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
+.+.|+|+|++ |.+|..++....- ..++...+.+|++|++.||.|||..+ +|||.||||+|||+.
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 45789999998 6666666644322 34888999999999999999999987 699999999999983
No 427
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=2.1e-22 Score=208.14 Aligned_cols=167 Identities=17% Similarity=0.216 Sum_probs=128.6
Q ss_pred HHhcCCCCCCcccccCceEEEEEEeC--CCCEEEEEEccCC-----ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCC
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNLP--RGQEFAVKRLSAT-----STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERD 504 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 504 (656)
....+|+..+.||+|+||+||+|... +++.+|||++... .....+.+.+|++++++++|+|+++.+.. ..
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~ 91 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TG 91 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cC
Confidence 45678999999999999999999653 5777899986533 12234568999999999999999864322 24
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccc-CCCCEEEcCCCcEEEEeccC
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDL-KASNILLDNELNPKISDFGM 583 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Di-kp~NILl~~~~~~kl~DfGl 583 (656)
..++||||+++++|... . . .. ...++.+++++|.|||+.+ |+|||| ||+|||++.++.+||+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~--~--~---~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA--R--P---HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHh--C--c---cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 57999999999999622 1 1 11 1467889999999999987 999999 99999999999999999999
Q ss_pred ccccccCccccc------cccccccccccccccccCC
Q 006211 584 AKLFRKDVDEAN------TGRIVGTYGYVPPEYVKKG 614 (656)
Q Consensus 584 a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 614 (656)
|+.+........ .....+++.|+|||.+...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 987654321111 1245778889999998643
No 428
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=9.4e-21 Score=196.59 Aligned_cols=203 Identities=21% Similarity=0.256 Sum_probs=164.1
Q ss_pred CCCCCCcccccCceEEEEEEeCCC--CEEEEEEccCCChhhHHHHHHHHHHHHhcCC----CceeeEEEEE-eeCCceEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPRG--QEFAVKRLSATSTQGLEEFKNEVSLTARLQH----VNLLRVLGYC-TERDENML 508 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l 508 (656)
+|.+.++||+|+||.||.+..... ..+|+|............+..|+.++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 789999999999999999965443 4789998766533322257788888888863 5888898888 47778899
Q ss_pred EEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-----CcEEEEeccC
Q 006211 509 IYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-----LNPKISDFGM 583 (656)
Q Consensus 509 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-----~~~kl~DfGl 583 (656)
||+.+ |.+|.++..... ...++..+...++.|++.+|++||+.+ ++||||||.|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99987 889988764433 456899999999999999999999998 9999999999999865 3699999999
Q ss_pred cc--ccccCcc------ccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 584 AK--LFRKDVD------EANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 584 a~--~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
++ .+..... ........||..|++++...+...+.+.|+||++.++.|++.|..||....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 98 3222111 111223569999999999999999999999999999999999999996544
No 429
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=7.5e-21 Score=183.53 Aligned_cols=205 Identities=22% Similarity=0.283 Sum_probs=168.7
Q ss_pred HhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 510 (656)
..-+|++.++||+|+||+++.| .+-+++.||||.-...++ .-++..|....+.| ..++|..++-+..++....||+
T Consensus 26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred ecccceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 3457899999999999999999 567899999996543322 24567788888888 4788988888888888889999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-----CcEEEEeccCcc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-----LNPKISDFGMAK 585 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-----~~~kl~DfGla~ 585 (656)
|.+ |.+|+++.--+.+ .++.++...++.|++.-++++|+.+ +|.|||||+|+||..- ..+.|+|||+|+
T Consensus 104 dLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 104 DLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 987 8899887643333 4788999999999999999999998 9999999999999643 358999999999
Q ss_pred ccccCcccc-----ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 586 LFRKDVDEA-----NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 586 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
.+....... ......||.+||+-....+..-+.+.|+-|||-++.+.|-|..||.+..-+
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~ 242 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD 242 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence 876543221 233467999999999888999999999999999999999999999876544
No 430
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=3.1e-21 Score=178.24 Aligned_cols=205 Identities=23% Similarity=0.312 Sum_probs=166.6
Q ss_pred HhcCCCCCCcccccCceEEEEE-EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCC-CceeeEEEEEeeCCceEEEE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKG-NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH-VNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 510 (656)
...+|.++++||.|+||.+|.| ...+|..||||.-+.... ...+..|..+.+.+++ ..|..+..+..+.....+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 3568999999999999999999 667899999997654322 2346778899998864 56777777888888999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC---CcEEEEeccCcccc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE---LNPKISDFGMAKLF 587 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~---~~~kl~DfGla~~~ 587 (656)
+.+ |.+|+++..-..+ .++..+.+-++.|++.-++|+|..+ +|||||||+|.|..-+ ..+.++|||+|+.+
T Consensus 91 dLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhh
Confidence 987 8899887744433 3788899999999999999999998 9999999999999644 35889999999976
Q ss_pred ccCccc-----cccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCc
Q 006211 588 RKDVDE-----ANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTS 645 (656)
Q Consensus 588 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~ 645 (656)
...... .......||.+|.+-....+..-+.+.|+-|+|.+|.++.-|..||+.....
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 543222 1223467899999988877777788999999999999999999999876543
No 431
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=5.2e-19 Score=183.76 Aligned_cols=202 Identities=30% Similarity=0.443 Sum_probs=168.2
Q ss_pred CCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChh---hHHHHHHHHHHHHhcCCC-ceeeEEEEEeeCCceEEEEEe
Q 006211 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ---GLEEFKNEVSLTARLQHV-NLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 512 (656)
|...+.||.|+|+.||++... ..+++|.+...... ....+.+|..++..+.|+ +++++.+.+......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999765 88999998765332 356789999999999988 799999999777778999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC-cEEEEeccCccccccCc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL-NPKISDFGMAKLFRKDV 591 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfGla~~~~~~~ 591 (656)
+.++++..++........++......+..|++.++.++|+.+ ++|||+||+||+++... .++++|||.++.+....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999866643221125888999999999999999999998 99999999999999998 79999999998554332
Q ss_pred ccc----ccccccccccccccccccC---CCCCccchhHHHHHHHHHHHcCCCCCCCCC
Q 006211 592 DEA----NTGRIVGTYGYVPPEYVKK---GIYSMKYDVYSFGVLLLQIISSKRNARYYG 643 (656)
Q Consensus 592 ~~~----~~~~~~gt~~y~aPE~~~~---~~~s~~sDvwslGvil~elltg~~p~~~~~ 643 (656)
... ......|+..|+|||.+.. ...+...|+||+|++++++++|..|+....
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~ 215 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK 215 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 221 2355689999999999887 578889999999999999999999976544
No 432
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=4e-20 Score=177.65 Aligned_cols=172 Identities=12% Similarity=0.157 Sum_probs=132.3
Q ss_pred HHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhh---HHH------HHHHHHHHHhcCCCceeeEEEEEee
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG---LEE------FKNEVSLTARLQHVNLLRVLGYCTE 502 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~------~~~e~~~l~~l~h~niv~l~~~~~~ 502 (656)
...++|+..+.+|.|+||.||.... ++..+|+|+++...... ... +.+|+..+.++.||+|..+..++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 4578999999999999999999866 57789999997653222 122 5789999999999999999888653
Q ss_pred C--------CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC
Q 006211 503 R--------DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL 574 (656)
Q Consensus 503 ~--------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~ 574 (656)
. ...+++|||++|.+|.++. .+++ ....++++++..+|..+ ++|||++|+||++++++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~-------~~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMP-------EISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhh-------hccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence 3 3578999999999997663 1222 24558999999999987 99999999999999998
Q ss_pred cEEEEeccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHH
Q 006211 575 NPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633 (656)
Q Consensus 575 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ell 633 (656)
++|+|||.......+ ... ........+..++|+||||+.+..+.
T Consensus 173 -i~liDfg~~~~~~e~---~a~-----------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 -LRIIDLSGKRCTAQR---KAK-----------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred -EEEEECCCcccccch---hhH-----------HHHHHHhHhcccccccceeEeehHHH
Confidence 999999988654211 000 11334445667899999999887654
No 433
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.81 E-value=1.3e-20 Score=219.10 Aligned_cols=147 Identities=16% Similarity=0.195 Sum_probs=109.6
Q ss_pred cCC-CceeeEEEEE-------eeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 006211 488 LQH-VNLLRVLGYC-------TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVI 559 (656)
Q Consensus 488 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ii 559 (656)
++| +||.++++.| ......+.++|++ +++|..++... ...+++.+++.++.||++||.|||+++ |+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 344 4677777766 2234566778877 66999998543 345899999999999999999999987 99
Q ss_pred ecccCCCCEEEcCCC-------------------cEEEEeccCccccccCcc--------------cccccccccccccc
Q 006211 560 HRDLKASNILLDNEL-------------------NPKISDFGMAKLFRKDVD--------------EANTGRIVGTYGYV 606 (656)
Q Consensus 560 H~Dikp~NILl~~~~-------------------~~kl~DfGla~~~~~~~~--------------~~~~~~~~gt~~y~ 606 (656)
||||||+||||+..+ .+|++|||+++....... ........||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996544 455566666543211000 00011235788899
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 607 PPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 607 aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
|||++.+..++.++|||||||++|||+++..|+.
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~ 216 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence 9999999999999999999999999999988865
No 434
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=2.2e-19 Score=170.77 Aligned_cols=139 Identities=18% Similarity=0.163 Sum_probs=106.5
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChh--h------------------------HHHHHHHHHHHHhcCCCce
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ--G------------------------LEEFKNEVSLTARLQHVNL 493 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni 493 (656)
.+.||+|++|.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999998778999999998754211 0 0122359999999987776
Q ss_pred eeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcEecccCCCCEEEcC
Q 006211 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYL-QEYSNFRVIHRDLKASNILLDN 572 (656)
Q Consensus 494 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~iiH~Dikp~NILl~~ 572 (656)
........ ...++||||++++++..... ....++..+...++.|++.+|.+| |+.+ |+||||||+|||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHD 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEEC
Confidence 43332222 23489999999887654422 223578899999999999999999 6776 999999999999994
Q ss_pred CCcEEEEeccCcccc
Q 006211 573 ELNPKISDFGMAKLF 587 (656)
Q Consensus 573 ~~~~kl~DfGla~~~ 587 (656)
+.++|+|||+|...
T Consensus 154 -~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 -GKLYIIDVSQSVEH 167 (190)
T ss_pred -CcEEEEEccccccC
Confidence 68999999999643
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=1.3e-18 Score=166.11 Aligned_cols=140 Identities=20% Similarity=0.238 Sum_probs=109.6
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChh---------------------h-----HHHHHHHHHHHHhcCCCce
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ---------------------G-----LEEFKNEVSLTARLQHVNL 493 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~e~~~l~~l~h~ni 493 (656)
...||+|++|.||+|...+|+.||||+++..... . ...+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999998768999999998764211 0 1124578899999999987
Q ss_pred eeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecccCCCCEEEcC
Q 006211 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-YSNFRVIHRDLKASNILLDN 572 (656)
Q Consensus 494 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiH~Dikp~NILl~~ 572 (656)
.....+... ..++||||++++++..... ....++..+...++.+++.++.++|+ .+ |+||||||+|||++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence 544443332 3489999999885543321 22346788899999999999999999 76 99999999999999
Q ss_pred CCcEEEEeccCccccc
Q 006211 573 ELNPKISDFGMAKLFR 588 (656)
Q Consensus 573 ~~~~kl~DfGla~~~~ 588 (656)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 7899999999997654
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=4.5e-18 Score=159.81 Aligned_cols=185 Identities=18% Similarity=0.130 Sum_probs=137.5
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCChh----hHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEEec
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ----GLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
....|++|+||+|+.+.. .+..++.+.+.....- ....+.+|+++|+++. |+++.+++++ ...+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 457899999999998865 6778888877665331 1225789999999995 5789998886 3469999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEeccc-CCCCEEEcCCCcEEEEeccCccccccCcc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDL-KASNILLDNELNPKISDFGMAKLFRKDVD 592 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Di-kp~NILl~~~~~~kl~DfGla~~~~~~~~ 592 (656)
+|.+|..... . ....++.|++++|.++|+.+ |+|||| ||.|||+++++.++|+|||++........
T Consensus 81 ~G~~L~~~~~----~------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 81 AGAAMYQRPP----R------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred cCccHHhhhh----h------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 9988854321 0 12357788999999999998 999999 79999999999999999999985443221
Q ss_pred c----c-------ccccccccccccccccccCC-CCC-ccchhHHHHHHHHHHHcCCCCCCC
Q 006211 593 E----A-------NTGRIVGTYGYVPPEYVKKG-IYS-MKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 593 ~----~-------~~~~~~gt~~y~aPE~~~~~-~~s-~~sDvwslGvil~elltg~~p~~~ 641 (656)
. . .......++.+++|+...-. ..+ ...+.++.|+.+|.++|++.|...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0 01112356778888753321 223 467889999999999999988754
No 437
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.75 E-value=3.8e-18 Score=161.11 Aligned_cols=107 Identities=21% Similarity=0.156 Sum_probs=92.1
Q ss_pred CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccc
Q 006211 516 KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEAN 595 (656)
Q Consensus 516 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 595 (656)
|+|.+++... +..+++..+..++.|+++||.|||+.+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc-----
Confidence 6788888542 345899999999999999999999875 999999999999999 9998765321
Q ss_pred cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCC
Q 006211 596 TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYY 642 (656)
Q Consensus 596 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~ 642 (656)
...|++.|||||++.+..++.++|||||||++|||++|+.||...
T Consensus 63 --~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~ 107 (176)
T smart00750 63 --QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEE 107 (176)
T ss_pred --cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 125789999999999999999999999999999999999998543
No 438
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=5.2e-19 Score=195.00 Aligned_cols=202 Identities=26% Similarity=0.377 Sum_probs=159.2
Q ss_pred CCCcccccCceEEEEEEe-CCCCEEEEEEcc-----CCChh-hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 439 SANKLGEGGFGPVYKGNL-PRGQEFAVKRLS-----ATSTQ-GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~-----~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
....+|.|++|.|+.... ...+..+.|... ..... ....+..|+.+-..++|||++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 457899999997777633 233334444322 11111 12236678888888999999887777766666666699
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
||++ +|..++.. ...++..++..++.|++.|+.|+|+.+ +.|||+|++|++++.++.+||+|||.+..+....
T Consensus 402 ~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 402 YCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred cccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 9999 88877743 235788899999999999999999998 9999999999999999999999999998876655
Q ss_pred cc--cccccccccccccccccccCCCCCcc-chhHHHHHHHHHHHcCCCCCCCCCCccc
Q 006211 592 DE--ANTGRIVGTYGYVPPEYVKKGIYSMK-YDVYSFGVLLLQIISSKRNARYYGTSEN 647 (656)
Q Consensus 592 ~~--~~~~~~~gt~~y~aPE~~~~~~~s~~-sDvwslGvil~elltg~~p~~~~~~~~~ 647 (656)
+. ......+|+..|+|||.+.+..|.+. .||||.|+++..|++|+.||.....++.
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN 533 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence 54 45566789999999999999998765 8999999999999999999977665543
No 439
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=4.2e-17 Score=156.48 Aligned_cols=138 Identities=22% Similarity=0.308 Sum_probs=105.6
Q ss_pred CCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-----CCCceeeEEEEEeeCC---c-eEE
Q 006211 438 SSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-----QHVNLLRVLGYCTERD---E-NML 508 (656)
Q Consensus 438 ~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l 508 (656)
...+.||+|+||.||. ...++. .+||+.........+.+.+|+.+++.+ .||||+++++++.++. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3457899999999996 333444 479988765444556789999999999 5799999999998864 2 237
Q ss_pred EEEe--cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCcEecccCCCCEEEcC----CCcEEEEe-
Q 006211 509 IYEY--LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGL-LYLQEYSNFRVIHRDLKASNILLDN----ELNPKISD- 580 (656)
Q Consensus 509 v~e~--~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~Lh~~~~~~iiH~Dikp~NILl~~----~~~~kl~D- 580 (656)
|+|| +++++|.+++.+. .+++. ..++.+++.++ +|||+.+ |+||||||+|||++. +..++|+|
T Consensus 83 I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred EecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 8999 6689999999542 24444 35577777777 8999998 999999999999974 34799999
Q ss_pred ccCccc
Q 006211 581 FGMAKL 586 (656)
Q Consensus 581 fGla~~ 586 (656)
||....
T Consensus 154 ~G~~~~ 159 (210)
T PRK10345 154 IGESTF 159 (210)
T ss_pred CCCcce
Confidence 554433
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1.5e-17 Score=186.72 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=156.8
Q ss_pred HHHHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC---CCceeeEEEEEeeCCce
Q 006211 430 IKAATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ---HVNLLRVLGYCTERDEN 506 (656)
Q Consensus 430 ~~~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~ 506 (656)
.+.-...|.+.+.||+|+||+||+|...+|+.||+|+-+....-+ |---.+++.+|+ -+.|..+..++.-.+..
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 334456788889999999999999988789999999887664322 111122333333 22344455555567778
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-------CCcEEEE
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-------ELNPKIS 579 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-------~~~~kl~ 579 (656)
++|+||.+.|+|.+++. ....++|.-...++.|+++.++.||..+ |||+||||+|.||.. ...++|+
T Consensus 770 ~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEE
Confidence 99999999999999985 4456899999999999999999999998 999999999999953 3458999
Q ss_pred eccCccccccCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCC
Q 006211 580 DFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRN 638 (656)
Q Consensus 580 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p 638 (656)
|||-+..+.--.+.......++|-.+-.+|+..++.++++.|.|.|+-+++-||.|+-.
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99999755433333444456788999999999999999999999999999999999743
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=2.8e-18 Score=180.12 Aligned_cols=186 Identities=25% Similarity=0.291 Sum_probs=152.4
Q ss_pred cccccCceEEEEEE----eCCCCEEEEEEccCCChhh--HHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEEecC
Q 006211 442 KLGEGGFGPVYKGN----LPRGQEFAVKRLSATSTQG--LEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIYEYLP 514 (656)
Q Consensus 442 ~iG~G~~g~V~~~~----~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 514 (656)
.+|+|+||.|+.++ ...+..+|+|++.+..... ......|..++...+ ||.++++...+..+...++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37899999999873 2347788999887653221 114466788888887 9999999999999999999999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcccc
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEA 594 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 594 (656)
+|.|...+.. ....++.....+...++-+++++|+.+ ++|||+|++||+++.+|++++.|||+++..-....
T Consensus 81 gg~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-- 152 (612)
T KOG0603|consen 81 GGDLFTRLSK---EVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-- 152 (612)
T ss_pred cchhhhcccc---CCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence 9998766643 234566667777888899999999998 99999999999999999999999999986533211
Q ss_pred ccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 595 NTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 595 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.+||..|||||++. .....+|.||||++++||+||-.||..
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 18899999999988 456789999999999999999999976
No 442
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.70 E-value=5.5e-18 Score=159.27 Aligned_cols=195 Identities=21% Similarity=0.358 Sum_probs=151.1
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCC--ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCC
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSAT--STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKS 517 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 517 (656)
.-+|.+.-.|+.|+|+++ |..+++|++... .....++|.+|.-.|+.+.||||+.+++.|.....+.++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 356888889999999995 455666776543 22334578999999999999999999999999999999999999999
Q ss_pred hhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccc
Q 006211 518 LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597 (656)
Q Consensus 518 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 597 (656)
|...+++. ..-..+..++.+++..+++|++|||+..+ -|.---|.++.++||++...+|+ .+-.+.. ....
T Consensus 274 lynvlhe~-t~vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltaris-mad~kfs-----fqe~- 344 (448)
T KOG0195|consen 274 LYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARIS-MADTKFS-----FQEV- 344 (448)
T ss_pred HHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhhee-cccceee-----eecc-
Confidence 99999764 33456778899999999999999999873 24445788999999999887763 1111110 1111
Q ss_pred cccccccccccccccCCCCC---ccchhHHHHHHHHHHHcCCCCCCCCCC
Q 006211 598 RIVGTYGYVPPEYVKKGIYS---MKYDVYSFGVLLLQIISSKRNARYYGT 644 (656)
Q Consensus 598 ~~~gt~~y~aPE~~~~~~~s---~~sDvwslGvil~elltg~~p~~~~~~ 644 (656)
...-.+.||+||.++..+-+ .++|+|||++++|||-|...||....+
T Consensus 345 gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp 394 (448)
T KOG0195|consen 345 GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP 394 (448)
T ss_pred ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence 11235789999999876643 468999999999999999999976543
No 443
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=4.7e-16 Score=153.06 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=110.3
Q ss_pred cCCCCCCcccccCceEEEEEE--eCCCCEEEEEEccCCChh------------------------hHHHHHHHHHHHHhc
Q 006211 435 NNFSSANKLGEGGFGPVYKGN--LPRGQEFAVKRLSATSTQ------------------------GLEEFKNEVSLTARL 488 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 488 (656)
.-|++.+.||+|++|.||+|. ..+|+.||+|+++..... ....+..|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347888999999999999997 568999999998753210 012356899999999
Q ss_pred CCCc--eeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCC
Q 006211 489 QHVN--LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKAS 566 (656)
Q Consensus 489 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~ 566 (656)
.+.+ +.+++.. ...++||||+++++|...... .......+...++.|++.++.+||+.+ +++||||||+
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~ 178 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEY 178 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChh
Confidence 7533 3444432 235899999999888655422 223556667889999999999999886 4999999999
Q ss_pred CEEEcCCCcEEEEeccCcccc
Q 006211 567 NILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 567 NILl~~~~~~kl~DfGla~~~ 587 (656)
||+++ ++.++|+|||.+...
T Consensus 179 NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hEEEE-CCCEEEEEChhhhcc
Confidence 99999 789999999998754
No 444
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=7.1e-16 Score=150.21 Aligned_cols=134 Identities=18% Similarity=0.300 Sum_probs=111.9
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCCh--h------hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATST--Q------GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
+.||+|++|.||+|.. .+..+++|+...... . ....+.+|+.++..+.|+++.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999977 677899997654321 1 123577899999999999988777777777788999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
+++++|..++... .. ....++.+++.+|.+||+.+ ++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999998887431 12 77889999999999999987 99999999999999 77899999999875
No 445
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=9.5e-16 Score=147.62 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=109.1
Q ss_pred HHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCCh----------------------hhHHHHHHHHHHHHhcC
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATST----------------------QGLEEFKNEVSLTARLQ 489 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~ 489 (656)
.....|.+.+.||+|+||.||++...+++.||||+++.... ........|+.++..+.
T Consensus 12 ~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 12 KRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred HcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 33344778899999999999999887899999998654320 01123567888899887
Q ss_pred CCc--eeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCC
Q 006211 490 HVN--LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASN 567 (656)
Q Consensus 490 h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~N 567 (656)
|++ +.+.++ ....++||||+++++|..... ......++.+++.++.++|+.+ ++||||+|+|
T Consensus 92 ~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~---------~~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~N 155 (198)
T cd05144 92 EEGFPVPKPID----WNRHAVVMEYIDGVELYRVRV---------LEDPEEVLDEILEEIVKAYKHG---IIHGDLSEFN 155 (198)
T ss_pred HcCCCCCceee----cCCceEEEEEeCCcchhhccc---------cccHHHHHHHHHHHHHHHHHCC---CCcCCCCccc
Confidence 774 444443 245689999999998865431 0234578889999999999987 9999999999
Q ss_pred EEEcCCCcEEEEeccCccccc
Q 006211 568 ILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 568 ILl~~~~~~kl~DfGla~~~~ 588 (656)
|++++++.++|+|||++....
T Consensus 156 ill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 156 ILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEEcCCCcEEEEECCccccCC
Confidence 999999999999999996543
No 446
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.64 E-value=1.8e-15 Score=145.91 Aligned_cols=131 Identities=21% Similarity=0.342 Sum_probs=105.7
Q ss_pred cccccCceEEEEEEeCCCCEEEEEEccCCC--h------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEec
Q 006211 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATS--T------QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYL 513 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~~~~~~vavK~~~~~~--~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 513 (656)
.||+|++|.||+|.. ++..+++|+..... . ...+++.+|++++..++|+++.....++......+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 67889999864321 1 11346778999999999887665555556667779999999
Q ss_pred CCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 514 PNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 514 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
++++|...+.... . .++.+++++|.+||+.+ ++|+|++|+||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~-------~---~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN-------D---ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH-------H---HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999987763210 0 78999999999999987 99999999999999 789999999998753
No 447
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.5e-15 Score=166.60 Aligned_cols=138 Identities=19% Similarity=0.283 Sum_probs=110.8
Q ss_pred hcCCCCCCcccccCceEEEEEEeCCCCEEEEEE-ccCC-Ch------hhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCc
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKR-LSAT-ST------QGLEEFKNEVSLTARLQHVNLLRVLGYCTERDE 505 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~-~~~~-~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 505 (656)
...|...+.||+|+||.||++...... +++|+ .... .. ...+++.+|++++..++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344566789999999999999764443 44443 2211 11 123468899999999999999888877777778
Q ss_pred eEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcc
Q 006211 506 NMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAK 585 (656)
Q Consensus 506 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~ 585 (656)
.++||||+++++|..++. ....++.+++++|.+||+.+ ++||||||+|||+ .++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999988773 35678999999999999987 9999999999999 56789999999997
Q ss_pred cc
Q 006211 586 LF 587 (656)
Q Consensus 586 ~~ 587 (656)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 64
No 448
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.62 E-value=1.9e-15 Score=149.90 Aligned_cols=199 Identities=19% Similarity=0.278 Sum_probs=125.7
Q ss_pred CCCCcccccCceEEEEEEe-CCCCEEEEEEccCCC---hhhHHHHHHHHHHHHhcCC----------CceeeEEEEE---
Q 006211 438 SSANKLGEGGFGPVYKGNL-PRGQEFAVKRLSATS---TQGLEEFKNEVSLTARLQH----------VNLLRVLGYC--- 500 (656)
Q Consensus 438 ~~~~~iG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~--- 500 (656)
...+.||.|+++.||.+.. .+++.+|+|++.... ....+++++|.-....+.+ -.++--++..
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 3567899999999999965 458999999875442 2345566666544444322 1111111111
Q ss_pred ------eeCC--------ceEEEEEecCCCChhhhhh---CCCc-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecc
Q 006211 501 ------TERD--------ENMLIYEYLPNKSLDLYLF---DPIR-RYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRD 562 (656)
Q Consensus 501 ------~~~~--------~~~lv~e~~~~g~L~~~l~---~~~~-~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~D 562 (656)
.... +.+++|+-+ .++|..++. .... ...+....++.+..|+++.+++||+.+ ++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEecc
Confidence 1111 235667766 467766542 1111 122344556778899999999999998 99999
Q ss_pred cCCCCEEEcCCCcEEEEeccCccccccCccccccccccccccccccccccC--------CCCCccchhHHHHHHHHHHHc
Q 006211 563 LKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKK--------GIYSMKYDVYSFGVLLLQIIS 634 (656)
Q Consensus 563 ikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~sDvwslGvil~ellt 634 (656)
|+|+|++++++|.+.|+||+........... ...+..|.+||.... ..++.+.|.|+||+++|.|.|
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 9999999999999999999877654321111 233567999997643 247889999999999999999
Q ss_pred CCCCCCCCCCc
Q 006211 635 SKRNARYYGTS 645 (656)
Q Consensus 635 g~~p~~~~~~~ 645 (656)
++.||.....+
T Consensus 246 ~~lPf~~~~~~ 256 (288)
T PF14531_consen 246 GRLPFGLSSPE 256 (288)
T ss_dssp SS-STCCCGGG
T ss_pred ccCCCCCCCcc
Confidence 99999865443
No 449
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.60 E-value=1.9e-16 Score=174.44 Aligned_cols=196 Identities=20% Similarity=0.200 Sum_probs=144.7
Q ss_pred CCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCC-hhhHHHH---HHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATS-TQGLEEF---KNEVSLTARLQHVNLLRVLGYCTERDENMLIYE 511 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 511 (656)
++...+.||++.|=+|.+|+..+|. |+||++-+.. .-..+.+ +.|++ ...++|||++++.-+-....-.|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4667789999999999999887776 9999886543 2223333 34444 455689999999877666777788888
Q ss_pred ecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCc
Q 006211 512 YLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV 591 (656)
Q Consensus 512 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~ 591 (656)
|+.. +|.+.+. .+.-+...+.+-|+.|++.|+.-+|..+ |+|||||.+||||+.-..+.|+||..-+..--..
T Consensus 102 yvkh-nLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 8854 5655552 3455777888899999999999999998 9999999999999999999999998665321111
Q ss_pred cc-cc----cccccccccccccccccCC----------C-CCccchhHHHHHHHHHHHcC-CCCCC
Q 006211 592 DE-AN----TGRIVGTYGYVPPEYVKKG----------I-YSMKYDVYSFGVLLLQIISS-KRNAR 640 (656)
Q Consensus 592 ~~-~~----~~~~~gt~~y~aPE~~~~~----------~-~s~~sDvwslGvil~elltg-~~p~~ 640 (656)
+. .. ..+...-..|+|||.+... . .+++.||||+||++.||++- ++||.
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 11 11 1112233579999987531 1 57889999999999999886 55553
No 450
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=3e-14 Score=130.38 Aligned_cols=135 Identities=21% Similarity=0.254 Sum_probs=113.9
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCC--CceeeEEEEEeeCCceEEEEEecCCC
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH--VNLLRVLGYCTERDENMLIYEYLPNK 516 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 516 (656)
+.+.||+|.++.||++...+ ..+++|+...... ...+..|+..++.++| .++++++.+...++..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45789999999999998744 7899999866543 4568899999999976 58899988888778899999999988
Q ss_pred ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 517 SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 517 ~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
.+..+ +......++.++++++..||.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77533 4466677899999999999997655699999999999999988999999999864
No 451
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=3.4e-14 Score=135.54 Aligned_cols=137 Identities=19% Similarity=0.230 Sum_probs=97.2
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChh--hHHH----------------------HHHHHHHHHhcCCCc--e
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ--GLEE----------------------FKNEVSLTARLQHVN--L 493 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~n--i 493 (656)
.+.||+|+||.||+|...+++.||||++...... .... ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999998778999999988653211 1111 134556666654432 3
Q ss_pred eeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecccCCCCEEEcC
Q 006211 494 LRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQE-YSNFRVIHRDLKASNILLDN 572 (656)
Q Consensus 494 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~-~~~~~iiH~Dikp~NILl~~ 572 (656)
.+.+++ ...++||||++++.+........ ... .+...++.+++.++.++|. .+ ++|+||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence 444432 24589999999965432111100 011 5677899999999999998 65 99999999999999
Q ss_pred CCcEEEEeccCccccc
Q 006211 573 ELNPKISDFGMAKLFR 588 (656)
Q Consensus 573 ~~~~kl~DfGla~~~~ 588 (656)
++.++|+|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8899999999997543
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.54 E-value=1.4e-15 Score=156.90 Aligned_cols=124 Identities=27% Similarity=0.428 Sum_probs=108.1
Q ss_pred ceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 505 ENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 505 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
..++.|++|...+|.+++..+......++...+.++.|++.++.| ++ .+|+|+||.||+...+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 468999999999999999766666667888999999999999999 44 899999999999999999999999998
Q ss_pred cccccCc----cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHc
Q 006211 585 KLFRKDV----DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIIS 634 (656)
Q Consensus 585 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ellt 634 (656)
....... .........||..||+||.+.+..|+.|+||||||++|+||+.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 7654433 1233455789999999999999999999999999999999998
No 453
>COG3469 Chitinase [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.8e-12 Score=120.25 Aligned_cols=215 Identities=16% Similarity=0.221 Sum_probs=125.5
Q ss_pred ccceEEEEEecCCCC--------CCCCCCCC----CCccEEEEEEEEecCCCcEEecCCcchhhHHHHHHHHHhhCCCce
Q 006211 24 AQTWIKAGYWLAGRE--------FPLSDINS----ALFTHLICAFAEVDSSTYQLSISSANQQYFSIFANSVRRKNPSIK 91 (656)
Q Consensus 24 ~~~~~~~~y~~~~~~--------~~~~~i~~----~~~thi~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~k 91 (656)
++..+.+|||.+|.. -+..+|-. ..++-+..+|..-..+=..+.+....+..|...+.+|.++ +--
T Consensus 23 ~~~KvLvGyWHnw~sgaaDgyq~gs~adial~d~~~~ynvv~V~Fmk~~g~iptf~P~~~~daeFr~~v~aLnae--Gka 100 (332)
T COG3469 23 ISNKVLVGYWHNWKSGAADGYQQGSSADIALADTPRNYNVVTVSFMKGAGDIPTFKPYNDPDAEFRAQVGALNAE--GKA 100 (332)
T ss_pred cccceEEEeeecccccccccccccceeeeEeccCCcccceEEEEEeecCCCCcccCcCCCCHHHHHHHHHHhhcc--CcE
Confidence 445589999987642 12222221 2355566666533322122223333344454444444444 456
Q ss_pred EEEEeecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCcc---CcchHHHHHHH
Q 006211 92 TLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARLYGFQGIDLFWLWPNST---DLNSLGILLDE 168 (656)
Q Consensus 92 vl~sigg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~~---d~~~~~~ll~~ 168 (656)
|+||+ ||.+. +.-+ ....-++|+.+|++++++|||||+|||-|.-... ...-..+.+|.
T Consensus 101 vllsL------------GGAdg-----hIeL-~~~qE~~fv~eiirlietyGFDGLDiDLEq~ai~~~dnq~v~p~alk~ 162 (332)
T COG3469 101 VLLSL------------GGADG-----HIEL-KAGQEQAFVNEIIRLIETYGFDGLDIDLEQSAILAADNQTVIPAALKA 162 (332)
T ss_pred EEEEc------------cCccc-----eEEe-ccchHHHHHHHHHHHHHHhCCCccccchhhhhhhhcCCeeehHHHHHH
Confidence 78999 54432 1112 2234689999999999999999999999976432 23345677888
Q ss_pred HHhhcC-CCCCcEEEEEeecCCCcccccc--ChhhhhhccchhhhhhhcccCC-CCCCccccCCCCCCCCCCCCHHHHHH
Q 006211 169 WKASAS-DQPELTLSMAVRYSPTHETVSY--PIDSMKKNLNWAHLVAYDYHMP-SKENVTGIHAALYNPSSNISTDFGIR 244 (656)
Q Consensus 169 lr~~l~-~~~~~~ls~a~~~~~~~~~~~~--~~~~l~~~vD~invmtYD~~g~-~~~~~~g~~apl~~~~~~~~~~~~v~ 244 (656)
+|+.-. .++++.||+|.-...-.....| -+.++..+.|||+..-|+--|- -|- +..+++.- ..+.-+.+...
T Consensus 163 vk~hyk~~Gk~f~itMAPEfPYl~~~gaY~pyin~l~~~yD~i~pQlYNqGGdg~w~--~~~nawi~--q~nd~~kesfl 238 (332)
T COG3469 163 VKDHYKNQGKNFFITMAPEFPYLQGWGAYIPYINELRDYYDFIAPQLYNQGGDGNWV--TESNAWIA--QNNDMVKESFL 238 (332)
T ss_pred HHHHHHhcCCceEEEecCCCceecCCcccchHHHHHhhHHhhhhHHHhcCCCCCCCc--Cccccccc--cccHHHHHhHH
Confidence 887663 3568999998754321111112 2578999999999999987542 222 22233322 11112333333
Q ss_pred HHHH-------c---CCCCCceeecccC
Q 006211 245 EWLR-------R---GFPANKLVLGARA 262 (656)
Q Consensus 245 ~~~~-------~---g~p~~Kl~lG~p~ 262 (656)
+++. + .+|++|+++|+|.
T Consensus 239 y~~~~slanGtr~f~~ipa~k~aiGLPs 266 (332)
T COG3469 239 YYLTFSLANGTRGFEKIPADKFAIGLPS 266 (332)
T ss_pred HHhhhhhhcCcccceecccceeEEecCC
Confidence 3332 1 3799999999995
No 454
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.52 E-value=2.4e-14 Score=150.95 Aligned_cols=157 Identities=26% Similarity=0.417 Sum_probs=127.8
Q ss_pred HHhcCCCceeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccC
Q 006211 485 TARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLK 564 (656)
Q Consensus 485 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dik 564 (656)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.-...+.+.|+.||.|||... -..|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence 3568999999999999999999999999999999999865 3445888888999999999999999865 23999999
Q ss_pred CCCEEEcCCCcEEEEeccCccccccCccccccccccccccccccccccCCC-------CCccchhHHHHHHHHHHHcCCC
Q 006211 565 ASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKGI-------YSMKYDVYSFGVLLLQIISSKR 637 (656)
Q Consensus 565 p~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~s~~sDvwslGvil~elltg~~ 637 (656)
+.|++++....+||+|||+....................-|.|||.+.... .+.+.|+||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999999999999999999997654211111111223445799999987531 4667999999999999999999
Q ss_pred CCCCCCCc
Q 006211 638 NARYYGTS 645 (656)
Q Consensus 638 p~~~~~~~ 645 (656)
||......
T Consensus 157 ~~~~~~~~ 164 (484)
T KOG1023|consen 157 PFDLRNLV 164 (484)
T ss_pred cccccccc
Confidence 99775443
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=2.2e-13 Score=134.37 Aligned_cols=136 Identities=23% Similarity=0.254 Sum_probs=103.3
Q ss_pred CCccc-ccCceEEEEEEeCCCCEEEEEEccCCC-------------hhhHHHHHHHHHHHHhcCCCce--eeEEEEEeeC
Q 006211 440 ANKLG-EGGFGPVYKGNLPRGQEFAVKRLSATS-------------TQGLEEFKNEVSLTARLQHVNL--LRVLGYCTER 503 (656)
Q Consensus 440 ~~~iG-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 503 (656)
...|| .|+.|+||.+... +..++||++.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35687 8889999998774 7789999875321 1223467889999999998775 6666664432
Q ss_pred Cc----eEEEEEecCC-CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEE
Q 006211 504 DE----NMLIYEYLPN-KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKI 578 (656)
Q Consensus 504 ~~----~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl 578 (656)
.. .++|+|++++ .+|..++.. ..++.. .+.++++++.+||+.+ |+||||||+|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEE
Confidence 22 2599999997 688877633 234443 3568999999999998 999999999999999989999
Q ss_pred EeccCcccc
Q 006211 579 SDFGMAKLF 587 (656)
Q Consensus 579 ~DfGla~~~ 587 (656)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998753
No 456
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.49 E-value=1.4e-14 Score=159.90 Aligned_cols=172 Identities=22% Similarity=0.319 Sum_probs=123.8
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..+|..++.|..|+||.||..+.+ ..+++|+|+-+.. .+.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccc------hhhhc--cccccCCccee------------------
Confidence 356888899999999999999654 4667888533221 11111 33333444433
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccC--
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKD-- 590 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~-- 590 (656)
|+....+... ..++.. ++.+++|||+.+ |+|||+||.|.+|+.-|++|++|||+++.....
T Consensus 136 ---gDc~tllk~~---g~lPvd--------mvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ---GDCATLLKNI---GPLPVD--------MVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ---chhhhhcccC---CCCcch--------hhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 4444444221 122221 267899999998 999999999999999999999999999753211
Q ss_pred -----------ccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCCCCCcccc
Q 006211 591 -----------VDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARYYGTSENL 648 (656)
Q Consensus 591 -----------~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~~~~~~~~ 648 (656)
.........+||+.|.|||++....|...+|+|++|+++||.+-|+.||...+.++.+
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf 267 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 267 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH
Confidence 1111223468999999999999999999999999999999999999999887666544
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40 E-value=3.6e-14 Score=156.82 Aligned_cols=207 Identities=23% Similarity=0.335 Sum_probs=162.3
Q ss_pred CCCCCCcccccCceEEEEEEeC--CCCEEEEEEccCCC--hhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEE
Q 006211 436 NFSSANKLGEGGFGPVYKGNLP--RGQEFAVKRLSATS--TQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 436 ~y~~~~~iG~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 510 (656)
.|...+.||+|+|+.|-..... ....+|+|.+.... ....+....|..+-..+. |+|++.+++.....+..++.+
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4566778999999999887543 34456777665543 223344556777777776 999999999999999999999
Q ss_pred EecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcEecccCCCCEEEcCCC-cEEEEeccCccccc
Q 006211 511 EYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQ-EYSNFRVIHRDLKASNILLDNEL-NPKISDFGMAKLFR 588 (656)
Q Consensus 511 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh-~~~~~~iiH~Dikp~NILl~~~~-~~kl~DfGla~~~~ 588 (656)
++..++++...+.... ....+......++.|+..++.|+| ..+ +.|+||||+|.+++..+ ..+++|||+|..+.
T Consensus 101 ~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred CcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9999999876663211 113455667788999999999999 666 99999999999999999 99999999998776
Q ss_pred c-Cccccccccccc-cccccccccccCC-CCCccchhHHHHHHHHHHHcCCCCCCCCCCcc
Q 006211 589 K-DVDEANTGRIVG-TYGYVPPEYVKKG-IYSMKYDVYSFGVLLLQIISSKRNARYYGTSE 646 (656)
Q Consensus 589 ~-~~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~~sDvwslGvil~elltg~~p~~~~~~~~ 646 (656)
. ..........+| ++.|+|||...+. ......|+||.|+++.-+++|..|+.......
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~ 237 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD 237 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc
Confidence 5 333444445678 9999999988774 45678999999999999999999998765543
No 458
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=2.7e-12 Score=137.76 Aligned_cols=140 Identities=20% Similarity=0.224 Sum_probs=96.8
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCChhhHH----------------------------------------HHHH
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLE----------------------------------------EFKN 480 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~----------------------------------------~~~~ 480 (656)
+.||.|++|.||+|++.+|+.||||+.+....+... ++.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 679999999999999999999999998654211100 1334
Q ss_pred HHHHHHhc----CCCceeeEEEEE-eeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHH-HHHHHHhcC
Q 006211 481 EVSLTARL----QHVNLLRVLGYC-TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ-GLLYLQEYS 554 (656)
Q Consensus 481 e~~~l~~l----~h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~~Lh~~~ 554 (656)
|...+.++ +|.+-+.+-..+ ......++||||++|++|.+....... .. ....++..++. .+..+|..+
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 55444444 232223332222 224457999999999999876532111 12 23345665555 466778776
Q ss_pred CCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 555 ~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
++|+|++|.||++++++.++++|||++..+.
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999998764
No 459
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.38 E-value=1.4e-12 Score=129.58 Aligned_cols=145 Identities=21% Similarity=0.295 Sum_probs=103.6
Q ss_pred CCCceeeEEEEEeeC---------------------------CceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHH
Q 006211 489 QHVNLLRVLGYCTER---------------------------DENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIE 541 (656)
Q Consensus 489 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~ 541 (656)
+|||||++.++|.++ ...|+||.-.+ -+|..++... ..+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC----CCchHHHHHHHH
Confidence 699999988876442 23567777653 4677777542 244556677899
Q ss_pred HHHHHHHHHHhcCCCCcEecccCCCCEEEc--CCC--cEEEEeccCccccccC----ccccccccccccccccccccccC
Q 006211 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLD--NEL--NPKISDFGMAKLFRKD----VDEANTGRIVGTYGYVPPEYVKK 613 (656)
Q Consensus 542 ~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~--~~~--~~kl~DfGla~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~ 613 (656)
|+++++.|||..+ +.|||+|+.|||+. +++ .+.|+|||++---... ......-..-|...-||||+...
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999987 99999999999994 333 4789999987421110 00111112245667899998754
Q ss_pred CC------CCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 614 GI------YSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 614 ~~------~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
.+ --.|+|.|+.|.+.||+++...||..
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~ 459 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK 459 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence 32 12589999999999999999999965
No 460
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=6.2e-11 Score=111.01 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=96.1
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCcee-eEEEEEeeCCceEEEEEecCCCCh
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL-RVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
.+.|+.|.++.||++... +..+++|....... ....+..|...++.+.+.+++ +++.+. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 356889999999999864 77899998765432 123457888898888655544 444433 3345899999999877
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS--NFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~--~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
.... .....+..+++++|..||..+ ...++|+|++|.||+++ ++.++++||+.+..
T Consensus 79 ~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 5320 111245678999999999876 23369999999999999 56899999999864
No 461
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.22 E-value=6.7e-11 Score=128.40 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=93.0
Q ss_pred HhcCCCCCCcccccCceEEEEEEeCC-CCEEEEEEccCCChhh----------------------------------HH-
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNLPR-GQEFAVKRLSATSTQG----------------------------------LE- 476 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~- 476 (656)
....|+. +.||+|++|+||+|...+ |+.||||+.++...+. .+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 789999999999998877 9999999987542110 11
Q ss_pred -----HHHHHHHHHHhc----CCCceeeEEEEEee-CCceEEEEEecCCCChhhhhhCCCcC---CCCCHHHHHHHHHHH
Q 006211 477 -----EFKNEVSLTARL----QHVNLLRVLGYCTE-RDENMLIYEYLPNKSLDLYLFDPIRR---YVLDWQKRVNIIEGV 543 (656)
Q Consensus 477 -----~~~~e~~~l~~l----~h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~---~~l~~~~~~~i~~~i 543 (656)
++.+|...+.++ .+.+.+.+-.++.+ ....++||||++|+.+.+...-...+ ..+.......++.|+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 133344444443 23333443333332 45678999999999997642111111 012222222222332
Q ss_pred HHHHHHHHhcCCCCcEecccCCCCEEEcCCC----cEEEEeccCcccccc
Q 006211 544 TQGLLYLQEYSNFRVIHRDLKASNILLDNEL----NPKISDFGMAKLFRK 589 (656)
Q Consensus 544 ~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~----~~kl~DfGla~~~~~ 589 (656)
...+ ++|+|+||.||+++.++ .++++|||+...+..
T Consensus 277 -------f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -------FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3344 99999999999999988 999999999986643
No 462
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.19 E-value=1.6e-10 Score=123.28 Aligned_cols=167 Identities=15% Similarity=0.175 Sum_probs=125.8
Q ss_pred EeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHH
Q 006211 455 NLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQ 534 (656)
Q Consensus 455 ~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~ 534 (656)
...++.+|.|...+....+..+...+-++.|+.++||||++++.....++..|+|+|-+. .|..++.+ +...
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------l~~~ 104 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------LGKE 104 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH------hHHH
Confidence 445678888888776655444567788999999999999999999999999999999874 45555532 2345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccccccccccccccccccCC
Q 006211 535 KRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTGRIVGTYGYVPPEYVKKG 614 (656)
Q Consensus 535 ~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 614 (656)
...-.+.||++||.|||..+ .++|++|.-..|++++.|+.||++|.++........ .......-..|..|+.+...
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence 56667899999999998655 499999999999999999999999988754322111 11111122346677765443
Q ss_pred CCCccchhHHHHHHHHHHHcC
Q 006211 615 IYSMKYDVYSFGVLLLQIISS 635 (656)
Q Consensus 615 ~~s~~sDvwslGvil~elltg 635 (656)
. -..|.|.|||+++|++.|
T Consensus 181 ~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred c--cchhhhhHHHHHHHHhCc
Confidence 3 346999999999999999
No 463
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.06 E-value=3.2e-09 Score=100.18 Aligned_cols=134 Identities=18% Similarity=0.167 Sum_probs=96.1
Q ss_pred CcccccCceEEEEEEeCC-------CCEEEEEEccCCC------------h----------hhHHHH----HHHHHHHHh
Q 006211 441 NKLGEGGFGPVYKGNLPR-------GQEFAVKRLSATS------------T----------QGLEEF----KNEVSLTAR 487 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~----~~e~~~l~~ 487 (656)
..||.|--+.||.|...+ +..+|||+.+... . ...+.+ .+|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999996542 4789999765421 0 001222 378999988
Q ss_pred cCC--CceeeEEEEEeeCCceEEEEEecCCCChhh-hhhCCCcCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcEeccc
Q 006211 488 LQH--VNLLRVLGYCTERDENMLIYEYLPNKSLDL-YLFDPIRRYVLDWQKRVNIIEGVTQGLLYL-QEYSNFRVIHRDL 563 (656)
Q Consensus 488 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-h~~~~~~iiH~Di 563 (656)
+.. -++.+.+++ ...++||||+.++.+.. .+. ...++..+...+..+++.+|..| |..+ ++|+||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk----d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK----DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh----ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 853 456666654 45689999997654421 121 22345566677889999999988 7776 999999
Q ss_pred CCCCEEEcCCCcEEEEeccCccc
Q 006211 564 KASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 564 kp~NILl~~~~~~kl~DfGla~~ 586 (656)
++.|||+++ +.+.|+|||-+..
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~ 173 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVE 173 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCcee
Confidence 999999975 5799999998854
No 464
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.04 E-value=2.5e-09 Score=104.77 Aligned_cols=142 Identities=17% Similarity=0.254 Sum_probs=106.9
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCCh-hhHHHHHHHHHHHHhcCCC--ceeeEEEEEeeCC---ceEEEEEecC
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATST-QGLEEFKNEVSLTARLQHV--NLLRVLGYCTERD---ENMLIYEYLP 514 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~~ 514 (656)
+.|+.|..+.||++...+|..+++|....... .....+..|.++++.+.+. ++.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999876678999998765432 1345678999999999753 4566777665532 5689999999
Q ss_pred CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 006211 515 NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS---------------------------------------- 554 (656)
Q Consensus 515 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~---------------------------------------- 554 (656)
+.++...+.. ..++......++.++++.|..||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888654421 23566777777888888888887421
Q ss_pred -------------CCCcEecccCCCCEEEcC--CCcEEEEeccCccc
Q 006211 555 -------------NFRVIHRDLKASNILLDN--ELNPKISDFGMAKL 586 (656)
Q Consensus 555 -------------~~~iiH~Dikp~NILl~~--~~~~kl~DfGla~~ 586 (656)
...++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 234799999999999998 66689999998864
No 465
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=3.6e-09 Score=95.56 Aligned_cols=144 Identities=19% Similarity=0.294 Sum_probs=105.5
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEE-ccCC-------ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKR-LSAT-------STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIY 510 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~-~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 510 (656)
.+..|-+|+-+.|+++.. .|+...||. +.+. ..-...+..+|.+.+.++.--.|.-..-++.+.....|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456788999999999987 577777774 3222 1112346788999999886555555455666777788999
Q ss_pred EecCC-CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCc---EEEEeccCccc
Q 006211 511 EYLPN-KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN---PKISDFGMAKL 586 (656)
Q Consensus 511 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~---~kl~DfGla~~ 586 (656)
||+++ .++..++........ ..+....++..|-+.+.-||.++ +||+||..+||++.+++. +.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 467777755333322 22333678888999999999998 999999999999987654 58999999965
Q ss_pred c
Q 006211 587 F 587 (656)
Q Consensus 587 ~ 587 (656)
-
T Consensus 166 s 166 (229)
T KOG3087|consen 166 S 166 (229)
T ss_pred c
Confidence 3
No 466
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=4.4e-09 Score=95.66 Aligned_cols=131 Identities=21% Similarity=0.334 Sum_probs=99.8
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEc-cCC--Chh-----hHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEe
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRL-SAT--STQ-----GLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEY 512 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~-~~~--~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 512 (656)
..+++|+-+.++.+.+ -|..+++|.- ++. .++ ..++..+|..++.+++--.|....-+..+.+...|+|||
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 4578999999999976 3445667643 222 111 123567899999988766665555566677788999999
Q ss_pred cCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 513 LPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 513 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
++|..|.+.+... ...++..+-..+.-||..+ |+|+||.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999998887432 2456777888888999988 99999999999999875 99999999974
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.98 E-value=4.5e-10 Score=118.95 Aligned_cols=200 Identities=21% Similarity=0.273 Sum_probs=150.1
Q ss_pred cCCCCCCcccc--cCceEEEEEEe---CCCCEEEEEEccCCCh--hhHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCce
Q 006211 435 NNFSSANKLGE--GGFGPVYKGNL---PRGQEFAVKRLSATST--QGLEEFKNEVSLTARL-QHVNLLRVLGYCTERDEN 506 (656)
Q Consensus 435 ~~y~~~~~iG~--G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 506 (656)
+.+...+.+|. |.+|.+|.+.. .++..+|+|+-+.... ....+=.+|..-..++ .|+|.++....+..++..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 45667788999 99999999854 4578899997443321 2111224455555555 499999988889999999
Q ss_pred EEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEec
Q 006211 507 MLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQ----GLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDF 581 (656)
Q Consensus 507 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~Df 581 (656)
++-+|.|. .+|..+.+.. ...++....+....+..+ |+.++|+.+ ++|-|+||.||+...+ ..++++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~--~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTP--CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhcc--cccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence 99999985 6777766543 223566777777777888 999999988 9999999999999999 88999999
Q ss_pred cCccccccCccccc---cccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCCC
Q 006211 582 GMAKLFRKDVDEAN---TGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNARY 641 (656)
Q Consensus 582 Gla~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~~ 641 (656)
|+...+........ .-...+...|++||..++ .++..+|+|++|.++.+-.++..++..
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~ 329 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSV 329 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccC
Confidence 99987755431111 111246678999998654 568889999999999999988877644
No 468
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis]
Probab=98.86 E-value=4e-08 Score=96.69 Aligned_cols=80 Identities=16% Similarity=0.127 Sum_probs=57.5
Q ss_pred CCceEEEEeecCCCCccccccCCcCCCccccccccCChhhHHHHHHHHHHHHHH-------cC---CCcceeeeeCCCcc
Q 006211 88 PSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGDSSHRKSFIESSIRTARL-------YG---FQGIDLFWLWPNST 157 (656)
Q Consensus 88 ~~~kvl~sigg~~~~~~~~~~Gg~~~~~~~f~~~~~~~~~r~~fi~~~~~~~~~-------~~---~DGvdidwe~p~~~ 157 (656)
.+.|||+|+||+.+ ...+++++.-+.|++.+-+..-. +| +||+|+|-|.-.+
T Consensus 102 ~GiKVlLSLGG~~G-----------------nYs~~~d~dA~~fA~~LWn~Fg~G~~S~RPfg~AVvDGfDF~IE~g~~- 163 (568)
T KOG4701|consen 102 NGIKVLLSLGGYNG-----------------NYSLNNDDDATNFAFQLWNIFGSGEDSYRPFGKAVVDGFDFEIEKGTN- 163 (568)
T ss_pred cCeEEEEeccCccc-----------------ceeeccchhHHHHHHHHHHHhcCCccccCcccchhccceeeeeecCCc-
Confidence 37999999954322 34566777778888887765422 12 8999999996544
Q ss_pred CcchHHHHHHHHHhhcCCC-CCcEEEEEeec
Q 006211 158 DLNSLGILLDEWKASASDQ-PELTLSMAVRY 187 (656)
Q Consensus 158 d~~~~~~ll~~lr~~l~~~-~~~~ls~a~~~ 187 (656)
..|.+|-+.||..|.++ +.+-|+.|...
T Consensus 164 --~~ysaLA~~L~~~Fa~~~r~yYLsaAPQC 192 (568)
T KOG4701|consen 164 --TAYSALAKRLLEIFASDPRRYYLSAAPQC 192 (568)
T ss_pred --chHHHHHHHHHHHHccCCceEEeccCCCC
Confidence 67899999999999554 46777776653
No 469
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.85 E-value=1.1e-09 Score=116.13 Aligned_cols=196 Identities=20% Similarity=0.226 Sum_probs=146.1
Q ss_pred HhcCCCCCCcccccCceEEEEEEe--CCCCEEEEEEccCCChhhHHH--HHHHHHHHHhc-CCCceeeEEEEEeeCCceE
Q 006211 433 ATNNFSSANKLGEGGFGPVYKGNL--PRGQEFAVKRLSATSTQGLEE--FKNEVSLTARL-QHVNLLRVLGYCTERDENM 507 (656)
Q Consensus 433 ~~~~y~~~~~iG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 507 (656)
...+|..+..||.|.|+.|+.... .++..+++|.+.........+ -..|+.+...+ .|.++++....+..-+..+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 345678889999999999999843 467889999887653322222 23455555555 5888888777777777778
Q ss_pred EEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCC-CcEEEEeccCccc
Q 006211 508 LIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNE-LNPKISDFGMAKL 586 (656)
Q Consensus 508 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~-~~~kl~DfGla~~ 586 (656)
+-.|||+++++.... .....+++...+++..|++.++.++|++. ++|+|++|.||++..+ +..++.|||++..
T Consensus 343 ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred CchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence 999999999987665 22345777888999999999999999887 9999999999999986 7889999999864
Q ss_pred cccCcccccccccccccccc--ccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 587 FRKDVDEANTGRIVGTYGYV--PPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
+... . .. .....+++ +|+......+..+.|++|||.-+.|.+++..-.
T Consensus 417 ~~~~--~--~~-~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls 466 (524)
T KOG0601|consen 417 LAFS--S--GV-FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLS 466 (524)
T ss_pred ccee--c--cc-ccccccccccchhhccccccccccccccccccccccccCcccC
Confidence 2211 0 00 11222344 555666677888999999999999999987544
No 470
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=4.1e-09 Score=102.93 Aligned_cols=155 Identities=21% Similarity=0.269 Sum_probs=114.7
Q ss_pred HHHHhcCCCceeeEEEEEeeCC-----ceEEEEEecCCCChhhhhhCCC-cCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 006211 483 SLTARLQHVNLLRVLGYCTERD-----ENMLIYEYLPNKSLDLYLFDPI-RRYVLDWQKRVNIIEGVTQGLLYLQEYSNF 556 (656)
Q Consensus 483 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~ 556 (656)
.-+-++.|.||+++..++.+.+ ...++.|||..|++..+|.+-. ....+......+++.||+.||.|||+.. +
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~-P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD-P 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-C
Confidence 3455567999999998886543 4678999999999999996532 2335677778899999999999999975 6
Q ss_pred CcEecccCCCCEEEcCCCcEEEEeccCccccccCc---cccccccccccccccccccccCCCCCccchhHHHHHHHHHHH
Q 006211 557 RVIHRDLKASNILLDNELNPKISDFGMAKLFRKDV---DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQII 633 (656)
Q Consensus 557 ~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~ell 633 (656)
+|+|+++..+-|++..++-+|+.- +......... .........+-++|.+||.=.....+..+|||+||...+||-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~-~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGS-VAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecc-cCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 799999999999999998888632 2111111110 111122234567899999866666778899999999999998
Q ss_pred cCCCCC
Q 006211 634 SSKRNA 639 (656)
Q Consensus 634 tg~~p~ 639 (656)
-+.-..
T Consensus 277 ilEiq~ 282 (458)
T KOG1266|consen 277 ILEIQS 282 (458)
T ss_pred Hheecc
Confidence 876654
No 471
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.74 E-value=7.3e-08 Score=90.68 Aligned_cols=124 Identities=27% Similarity=0.317 Sum_probs=79.9
Q ss_pred EEEEEEeCCCCEEEEEEccCCC-------------h-------------hhHHHHHHHHHHHHhcCCC--ceeeEEEEEe
Q 006211 450 PVYKGNLPRGQEFAVKRLSATS-------------T-------------QGLEEFKNEVSLTARLQHV--NLLRVLGYCT 501 (656)
Q Consensus 450 ~V~~~~~~~~~~vavK~~~~~~-------------~-------------~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 501 (656)
.||.|...++..+|+|..+... . .......+|.+.|.++..- ++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899988889999999765420 0 0123467899999999765 456665442
Q ss_pred eCCceEEEEEecC--CCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCcEecccCCCCEEEcCCCcEEE
Q 006211 502 ERDENMLIYEYLP--NKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLY-LQEYSNFRVIHRDLKASNILLDNELNPKI 578 (656)
Q Consensus 502 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-Lh~~~~~~iiH~Dikp~NILl~~~~~~kl 578 (656)
...+||||++ +..+..+.... ++......++.+++..+.. +|..+ ++|+||.+.|||++++ .+.|
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence 4589999998 55554332111 1123445667777775554 56776 9999999999999998 8999
Q ss_pred EeccCccc
Q 006211 579 SDFGMAKL 586 (656)
Q Consensus 579 ~DfGla~~ 586 (656)
+|||.+..
T Consensus 148 IDf~qav~ 155 (188)
T PF01163_consen 148 IDFGQAVD 155 (188)
T ss_dssp --GTTEEE
T ss_pred EecCccee
Confidence 99998864
No 472
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.71 E-value=3.8e-07 Score=91.09 Aligned_cols=141 Identities=19% Similarity=0.159 Sum_probs=97.6
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCChh-hH----------HHHHHHHHHHHhcCCCc--eeeEEEEEee-----
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQ-GL----------EEFKNEVSLTARLQHVN--LLRVLGYCTE----- 502 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~----------~~~~~e~~~l~~l~h~n--iv~l~~~~~~----- 502 (656)
+.+-+-....|.+... +|+.+.||+....... .. ..+.+|...+.++...+ ..+.+.+...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3444344444667665 6778999977543211 01 13678888887774333 3444555443
Q ss_pred CCceEEEEEecCCC-ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC-------CC
Q 006211 503 RDENMLIYEYLPNK-SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN-------EL 574 (656)
Q Consensus 503 ~~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~-------~~ 574 (656)
....++|+|++++. +|.+++.+.. ....+......++.+++..+.-||..+ ++|+|++++|||++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCc
Confidence 23468999999886 7887764321 123456677789999999999999998 999999999999985 46
Q ss_pred cEEEEeccCccc
Q 006211 575 NPKISDFGMAKL 586 (656)
Q Consensus 575 ~~kl~DfGla~~ 586 (656)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 799999998854
No 473
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.64 E-value=7e-09 Score=115.63 Aligned_cols=205 Identities=19% Similarity=0.203 Sum_probs=144.1
Q ss_pred hcCCCCCCcccccCceEEEEEEeC-CCCEEEEEEccCC---ChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEE
Q 006211 434 TNNFSSANKLGEGGFGPVYKGNLP-RGQEFAVKRLSAT---STQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 434 ~~~y~~~~~iG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 509 (656)
.+.+.+.+-+-+|+++.++.+.-. .|...++|..... .....+....+-.++-..++|-+++..--+.......++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 345666778889999999887432 3444444443322 111223333444444444566666555445566788999
Q ss_pred EEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 510 YEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 510 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
++|..+++|...++... ..+..........+.+.+++||... +.|+|++|.|+|+..++..+++|||.......
T Consensus 883 ~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence 99999999988876533 3455555666777889999999876 89999999999999999999999984332110
Q ss_pred ---------------------C----c----cccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCCC
Q 006211 590 ---------------------D----V----DEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNAR 640 (656)
Q Consensus 590 ---------------------~----~----~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~~ 640 (656)
. . +........+|+.|.+||...+......+|.|++|++++|.++|.+||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 0011223578999999999999888999999999999999999999996
Q ss_pred CCCC
Q 006211 641 YYGT 644 (656)
Q Consensus 641 ~~~~ 644 (656)
....
T Consensus 1037 a~tp 1040 (1205)
T KOG0606|consen 1037 AETP 1040 (1205)
T ss_pred Ccch
Confidence 5543
No 474
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.62 E-value=4.4e-07 Score=94.41 Aligned_cols=170 Identities=21% Similarity=0.299 Sum_probs=126.4
Q ss_pred CceEEEEEE-eCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEee----CCceEEEEEecCC-CChhh
Q 006211 447 GFGPVYKGN-LPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTE----RDENMLIYEYLPN-KSLDL 520 (656)
Q Consensus 447 ~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-g~L~~ 520 (656)
.-.+.|++. ..+|..|++|+++............-++.++++.|+|+|++.+++.. +..+++|++|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346788884 45799999999965444333233456789999999999999998863 3457899999876 45554
Q ss_pred hhhC------------CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccc
Q 006211 521 YLFD------------PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFR 588 (656)
Q Consensus 521 ~l~~------------~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~ 588 (656)
+-+. ...+...++..++.++.|+..||.++|+.| +.-+-|.|++||++.+.+++|+..|....+.
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeec
Confidence 4332 122345788999999999999999999998 8889999999999999999998888776554
Q ss_pred cCccccccccccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCC
Q 006211 589 KDVDEANTGRIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRN 638 (656)
Q Consensus 589 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p 638 (656)
.+.. |-+.. -.+-|.=.||.+++.|.||...
T Consensus 445 ~d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 445 EDPT----------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCCC----------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 3220 11111 1256888999999999999765
No 475
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.55 E-value=6.9e-07 Score=86.40 Aligned_cols=134 Identities=20% Similarity=0.252 Sum_probs=95.2
Q ss_pred CCCCCcccccCceEEEEEEeCCCCEEEEEEccCCC----------------------hhhHHHHHHHHHHHHhcCCC--c
Q 006211 437 FSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATS----------------------TQGLEEFKNEVSLTARLQHV--N 492 (656)
Q Consensus 437 y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~--n 492 (656)
..+..+||-|--+.||.|..+.|.++|||.=+... .......++|.+.|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34678999999999999999999999999432210 01123467899999998644 5
Q ss_pred eeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcC
Q 006211 493 LLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDN 572 (656)
Q Consensus 493 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~ 572 (656)
+.+.+++ +...+|||++++-.|...- ++....-.++..|++-+.-+-..| +||+|+.+-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEec
Confidence 5565543 4568999999986664221 123333445555555555444555 999999999999999
Q ss_pred CCcEEEEeccCcc
Q 006211 573 ELNPKISDFGMAK 585 (656)
Q Consensus 573 ~~~~kl~DfGla~ 585 (656)
+|.+.++||-=+.
T Consensus 238 dg~~~vIDwPQ~v 250 (304)
T COG0478 238 DGDIVVIDWPQAV 250 (304)
T ss_pred CCCEEEEeCcccc
Confidence 9999999996553
No 476
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.42 E-value=3.5e-06 Score=85.61 Aligned_cols=192 Identities=14% Similarity=0.156 Sum_probs=125.3
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhc-CCCceeeEEEE------EeeCC-ceEEEE
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARL-QHVNLLRVLGY------CTERD-ENMLIY 510 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~------~~~~~-~~~lv~ 510 (656)
..+.||+|+.+.+|-.-. -.-.+.|+..........+ -+..|... .||-+..-+.+ .-++. ..-+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 456799999999996522 1223557776654332222 22233333 46643321111 11112 245667
Q ss_pred EecCCCChhhhhhC----CCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 511 EYLPNKSLDLYLFD----PIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 511 e~~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
+.+++-.--..+.+ ++.....+|.-+++.+..++.+...||..+ .+-+|+.++|+|+.+++.+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 76655422112211 222345789999999999999999999987 89999999999999999999998654433
Q ss_pred cccCcccccccccccccccccccccc-----CCCCCccchhHHHHHHHHHHHcC-CCCCCC
Q 006211 587 FRKDVDEANTGRIVGTYGYVPPEYVK-----KGIYSMKYDVYSFGVLLLQIISS-KRNARY 641 (656)
Q Consensus 587 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwslGvil~elltg-~~p~~~ 641 (656)
.. ......+.+|...|.+||... +..-+...|-|.||+++++|+.| +.||.+
T Consensus 167 ~~---ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG 224 (637)
T COG4248 167 NA---NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG 224 (637)
T ss_pred cc---CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence 21 222334458899999999754 33356789999999999999888 888865
No 477
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.41 E-value=1.7e-06 Score=93.69 Aligned_cols=145 Identities=17% Similarity=0.244 Sum_probs=92.8
Q ss_pred cCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhH----------------------------------H----
Q 006211 435 NNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGL----------------------------------E---- 476 (656)
Q Consensus 435 ~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~---- 476 (656)
..|+. +.|+.++-|+||+|.+.+|+.||||+.++.-.+.. +
T Consensus 126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 34442 67999999999999999999999998876421110 0
Q ss_pred --HHHHHHHHHHhc----C-CCceeeEEEEE-eeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHH-H
Q 006211 477 --EFKNEVSLTARL----Q-HVNLLRVLGYC-TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQG-L 547 (656)
Q Consensus 477 --~~~~e~~~l~~l----~-h~niv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~-l 547 (656)
++..|..-+.++ + .|+ +.+-.++ .-.....++|||++|-.+.+...-.. ...+... ++..++++ +
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k~---ia~~~~~~f~ 278 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRKE---LAELLVRAFL 278 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHHH---HHHHHHHHHH
Confidence 123344444443 2 233 2332333 33567799999999998887742222 2234222 33333332 2
Q ss_pred HHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCcccccc
Q 006211 548 LYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRK 589 (656)
Q Consensus 548 ~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~ 589 (656)
..+=.. +++|.|.+|.||+++.++.+.+.|||+...+..
T Consensus 279 ~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhc---CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 222223 399999999999999999999999999876543
No 478
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.40 E-value=2.9e-06 Score=81.94 Aligned_cols=106 Identities=25% Similarity=0.295 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHhcCC--CceeeEEEEEeeCC----ceEEEEEecCCC-ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHH
Q 006211 476 EEFKNEVSLTARLQH--VNLLRVLGYCTERD----ENMLIYEYLPNK-SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLL 548 (656)
Q Consensus 476 ~~~~~e~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~ 548 (656)
....+|...+..+.. -.+.+.+++..... ..++|+|++++. +|..++..... .+......++.+++..+.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHH
Confidence 356778877777743 23455666655432 347999999884 78888743211 455677889999999999
Q ss_pred HHHhcCCCCcEecccCCCCEEEcCCC---cEEEEeccCcccc
Q 006211 549 YLQEYSNFRVIHRDLKASNILLDNEL---NPKISDFGMAKLF 587 (656)
Q Consensus 549 ~Lh~~~~~~iiH~Dikp~NILl~~~~---~~kl~DfGla~~~ 587 (656)
-||..+ ++|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999998 99999999999999887 8999999988653
No 479
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.33 E-value=9.1e-06 Score=79.53 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=84.6
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc--eeeEEEEEeeCCceEEEEEecCCCC-
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGYCTERDENMLIYEYLPNKS- 517 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~g~- 517 (656)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-+ +.+.+.+....+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 57899999999984 25567888876533 2345688999998885433 4566777777777789999999863
Q ss_pred hhhh---------------------hhCCCcCCCCCHHHHH-HHHHH----------HHH-HHHHHHhc-CCCCcEeccc
Q 006211 518 LDLY---------------------LFDPIRRYVLDWQKRV-NIIEG----------VTQ-GLLYLQEY-SNFRVIHRDL 563 (656)
Q Consensus 518 L~~~---------------------l~~~~~~~~l~~~~~~-~i~~~----------i~~-~l~~Lh~~-~~~~iiH~Di 563 (656)
+... ++.... ......... .+..+ +.+ ...+|... ....++|+|+
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 2111 111000 001111100 00000 011 12222211 1234789999
Q ss_pred CCCCEEEcCCCcEEEEeccCccc
Q 006211 564 KASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 564 kp~NILl~~~~~~kl~DfGla~~ 586 (656)
.|.||++++++ +.++||+.+..
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcCc
Confidence 99999999988 99999998864
No 480
>PRK09902 hypothetical protein; Provisional
Probab=98.31 E-value=1.5e-05 Score=75.47 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=98.9
Q ss_pred ccccCceEEEEEEeCCCCEEEEEEccCCC------hhhHHHHHHHHHHHHhcCCC--ceeeEEEEEeeC----CceEEEE
Q 006211 443 LGEGGFGPVYKGNLPRGQEFAVKRLSATS------TQGLEEFKNEVSLTARLQHV--NLLRVLGYCTER----DENMLIY 510 (656)
Q Consensus 443 iG~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~----~~~~lv~ 510 (656)
-|+|+.+-|++-.. +|..+-+|+-..-. +-....|.+|...+.++..- .+.+........ ..-+||+
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 35688889998876 34478899765211 22446789999998888532 244444222221 1357899
Q ss_pred EecCC-CChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCc--EEEEeccCccc
Q 006211 511 EYLPN-KSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELN--PKISDFGMAKL 586 (656)
Q Consensus 511 e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~--~kl~DfGla~~ 586 (656)
|-+.+ -+|..++.+.. ....+......+..++++.+.-||+.+ +.|+|+.++||+++.++. ++++||--++.
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97754 47777764321 123567777899999999999999998 999999999999986666 99999987764
No 481
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.20 E-value=3.5e-05 Score=73.34 Aligned_cols=139 Identities=14% Similarity=0.200 Sum_probs=90.0
Q ss_pred HHhcCCCCCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHH---------HHHHHHHHHhcCC---CceeeEEEE
Q 006211 432 AATNNFSSANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEE---------FKNEVSLTARLQH---VNLLRVLGY 499 (656)
Q Consensus 432 ~~~~~y~~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h---~niv~l~~~ 499 (656)
....+|...+.+-......|.+-.. ++..+++|..+.......+. ..+++..+.+++. .....++.+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 3456788777787777777777666 57889999887653222111 2233343443422 222232222
Q ss_pred Eee-----CCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCC
Q 006211 500 CTE-----RDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNEL 574 (656)
Q Consensus 500 ~~~-----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~ 574 (656)
... ....+++|||++|..|.+.. .+++ .+...+.+.+.-||+.| +.|+|+.|.|++++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~-------~i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~- 171 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIE-------DIDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN- 171 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccch-------hcCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-
Confidence 221 23456899999998886543 1222 24455777889999987 9999999999999976
Q ss_pred cEEEEeccCccc
Q 006211 575 NPKISDFGMAKL 586 (656)
Q Consensus 575 ~~kl~DfGla~~ 586 (656)
.++++||+..+.
T Consensus 172 ~i~iID~~~k~~ 183 (229)
T PF06176_consen 172 GIRIIDTQGKRM 183 (229)
T ss_pred cEEEEECccccc
Confidence 499999987754
No 482
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.15 E-value=1.4e-05 Score=86.41 Aligned_cols=141 Identities=15% Similarity=0.190 Sum_probs=89.1
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCChhh-------------------------------HH------HHHHHHH
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG-------------------------------LE------EFKNEVS 483 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~------~~~~e~~ 483 (656)
+.||.-+.|.||+|++++|+.||||+-++.-++. .+ +|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 6799999999999999999999999876642111 01 1333333
Q ss_pred HHHh----cCCCc---eeeEEEEE-eeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 006211 484 LTAR----LQHVN---LLRVLGYC-TERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSN 555 (656)
Q Consensus 484 ~l~~----l~h~n---iv~l~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~ 555 (656)
-.++ ++|-+ -|.+-.++ .-.....|+||||+|..+.+...- .+..++......-+.+...-+-+- .
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i--~~~gi~~~~i~~~l~~~~~~qIf~--~-- 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI--DKRGISPHDILNKLVEAYLEQIFK--T-- 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH--HHcCCCHHHHHHHHHHHHHHHHHh--c--
Confidence 3222 34555 12222222 223567999999999888765421 223355554433333322212222 2
Q ss_pred CCcEecccCCCCEEEcC----CCcEEEEeccCccccc
Q 006211 556 FRVIHRDLKASNILLDN----ELNPKISDFGMAKLFR 588 (656)
Q Consensus 556 ~~iiH~Dikp~NILl~~----~~~~kl~DfGla~~~~ 588 (656)
+++|+|-+|.||++++ ++++.+-|||+...+.
T Consensus 321 -GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 321 -GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred -CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 4999999999999994 6789999999987654
No 483
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.06 E-value=5.8e-05 Score=75.10 Aligned_cols=141 Identities=16% Similarity=0.187 Sum_probs=84.9
Q ss_pred cccccCc-eEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEEecCCCChh
Q 006211 442 KLGEGGF-GPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQ-HVNLLRVLGYCTERDENMLIYEYLPNKSLD 519 (656)
Q Consensus 442 ~iG~G~~-g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 519 (656)
.|-.|.. ..||+.... +..+.+|+..... ...+.+|+++++.+. +--+.+++++....+..++|||+++|.++.
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 3445555 789999764 4788899876543 234567888888773 334556777776666789999999998775
Q ss_pred hhh-------------------hCCC-cCCCCCH--HHHHHHHH--------------------HHHHHHHHHHh----c
Q 006211 520 LYL-------------------FDPI-RRYVLDW--QKRVNIIE--------------------GVTQGLLYLQE----Y 553 (656)
Q Consensus 520 ~~l-------------------~~~~-~~~~l~~--~~~~~i~~--------------------~i~~~l~~Lh~----~ 553 (656)
... +... ....... ........ .+...+..|-. .
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 160 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE 160 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence 331 1100 0001110 00000000 01112222221 1
Q ss_pred CCCCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 554 SNFRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 554 ~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
..+.++|+|+.|.|||++++..+.|+||+.+..
T Consensus 161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 234599999999999999987788999998864
No 484
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment mod
Probab=98.06 E-value=3e-05 Score=79.87 Aligned_cols=158 Identities=14% Similarity=0.087 Sum_probs=100.5
Q ss_pred HHHHhhCCCceEEEEeecCCCCccccccCCcCCCccccccccCC-hhhHHHHHHHHHHHHHHcCCCcceeeeeCCC--cc
Q 006211 81 NSVRRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVGD-SSHRKSFIESSIRTARLYGFQGIDLFWLWPN--ST 157 (656)
Q Consensus 81 ~~~k~~~~~~kvl~sigg~~~~~~~~~~Gg~~~~~~~f~~~~~~-~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~--~~ 157 (656)
..+|++ +|||+-.|-- .|+.....+..++.+ ++.+..+|+.++++++.|||||+-||+|... .+
T Consensus 53 daAHkn--GV~Vlgti~~-----------e~~~~~~~~~~lL~~~~~~~~~~a~kLv~lak~yGfDGw~iN~E~~~~~~~ 119 (339)
T cd06547 53 NAAHRN--GVPVLGTFIF-----------EWTGQVEWLEDFLKKDEDGSFPVADKLVEVAKYYGFDGWLINIETELGDAE 119 (339)
T ss_pred HHHHhc--CCeEEEEEEe-----------cCCCchHHHHHHhccCcccchHHHHHHHHHHHHhCCCceEeeeeccCCcHH
Confidence 445555 7999988811 111122336788888 9999999999999999999999999999876 57
Q ss_pred CcchHHHHHHHHHhhcCCC-CCcEEEE--Eee-cCCCccccccCh--hhhhhccchhhhhhhcccCCCCCCccccCCCCC
Q 006211 158 DLNSLGILLDEWKASASDQ-PELTLSM--AVR-YSPTHETVSYPI--DSMKKNLNWAHLVAYDYHMPSKENVTGIHAALY 231 (656)
Q Consensus 158 d~~~~~~ll~~lr~~l~~~-~~~~ls~--a~~-~~~~~~~~~~~~--~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~ 231 (656)
+++++..|+++|++++++. ++..+.- ++- .+.-.++...+- ....+.+|-+.+ +| +|..
T Consensus 120 ~~~~l~~F~~~L~~~~~~~~~~~~v~WYDs~t~~G~l~wQn~Ln~~N~~ff~~~D~~Fl---NY---~W~~--------- 184 (339)
T cd06547 120 KAKRLIAFLRYLKAKLHENVPGSLVIWYDSMTEDGKLSWQNELNSKNKPFFDVCDGIFL---NY---WWTE--------- 184 (339)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCCCccchhhhhhHHHHHHHhhhcceeE---ec---CCCc---------
Confidence 8999999999999999542 1222211 110 011111111100 011122221111 22 2332
Q ss_pred CCCCCCCHHHHHHHHHHcCCCCCceeecccCCCCCcCCCC
Q 006211 232 NPSSNISTDFGIREWLRRGFPANKLVLGARASGPGITIDG 271 (656)
Q Consensus 232 ~~~~~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG~~~~~~g 271 (656)
...+.+++.....|..+.+|.+|+-..|++....+
T Consensus 185 -----~~l~~s~~~a~~~g~~~~dvy~GiDv~grg~~~~~ 219 (339)
T cd06547 185 -----ESLERSVQLAEGLGRSPYDVYVGVDVWGRGTKGGG 219 (339)
T ss_pred -----chHHHHHHHHHHcCCCHhHEEEEEEEEcCCcccCC
Confidence 13456667777889999999999999999876444
No 485
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.03 E-value=5e-05 Score=74.77 Aligned_cols=143 Identities=24% Similarity=0.245 Sum_probs=82.7
Q ss_pred CcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCC--ceeeEEEEEee---CCceEEEEEecCC
Q 006211 441 NKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHV--NLLRVLGYCTE---RDENMLIYEYLPN 515 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~e~~~~ 515 (656)
+.|+.|..+.||+....+ ..+++|..... .....+..|..+++.+... .+.+++..+.. ....+++|+++++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 568899999999998866 69999987654 3445677888888887533 34566654432 2346899999999
Q ss_pred CChhh----------------hh---hCC-CcCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh-
Q 006211 516 KSLDL----------------YL---FDP-IRRYVLDWQK---------RVNI------------IEGVTQ-GLLYLQE- 552 (656)
Q Consensus 516 g~L~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~~i~~-~l~~Lh~- 552 (656)
..+.. .+ +.. .......... .... ...+.+ .+..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 87766 11 110 0000001000 0000 111222 2333332
Q ss_pred ---cCCCCcEecccCCCCEEEc-CCCcEEEEeccCccc
Q 006211 553 ---YSNFRVIHRDLKASNILLD-NELNPKISDFGMAKL 586 (656)
Q Consensus 553 ---~~~~~iiH~Dikp~NILl~-~~~~~kl~DfGla~~ 586 (656)
.....++|+|+.|.|||++ +++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2334599999999999999 566667999998854
No 486
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.97 E-value=0.00012 Score=70.38 Aligned_cols=152 Identities=19% Similarity=0.237 Sum_probs=97.7
Q ss_pred cCHHHHHHHhcCCCCCC---cccccCceEEEEEEeCCCCEEEEEEccCCChhh-------------------HH-----H
Q 006211 425 FSFSDIKAATNNFSSAN---KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQG-------------------LE-----E 477 (656)
Q Consensus 425 ~~~~~~~~~~~~y~~~~---~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------------------~~-----~ 477 (656)
.+...+....++..+.. .|..|.-+.||+|...++..+|||+.+...... .+ -
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 34455555555555544 456677788999987789999999886542111 01 1
Q ss_pred HHHHHHHHHhcC--CCceeeEEEEEeeCCceEEEEEecCCCCh-hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 006211 478 FKNEVSLTARLQ--HVNLLRVLGYCTERDENMLIYEYLPNKSL-DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYS 554 (656)
Q Consensus 478 ~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~ 554 (656)
..+|..-|.++. +-.+.+-+.+. ...|||||+..... .-.| ....+...+...+..++++.+.-|-...
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L----kDv~~e~~e~~~~~~~~v~~~~~l~~~a 186 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL----KDVPLELEEAEGLYEDVVEYMRRLYKEA 186 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc----ccCCcCchhHHHHHHHHHHHHHHHHHhc
Confidence 245666676663 33444455443 34899999965411 1111 1112233356667777888888776632
Q ss_pred CCCcEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 555 NFRVIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 555 ~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
++||+||+.=|||+. ++.+.|+|+|=|...
T Consensus 187 --~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 187 --GLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred --CcccccchhhheEEE-CCeEEEEECcccccc
Confidence 399999999999999 778999999977543
No 487
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=97.96 E-value=1.5e-06 Score=93.76 Aligned_cols=96 Identities=20% Similarity=0.379 Sum_probs=74.7
Q ss_pred HHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCcc-------ccccccccccccccccccccCC
Q 006211 542 GVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVD-------EANTGRIVGTYGYVPPEYVKKG 614 (656)
Q Consensus 542 ~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~ 614 (656)
+++.|+.++|... .+||++|.|++|.++.++.+||+.|+.+........ ............|.|||.+...
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 3458999999755 699999999999999999999999998865433111 1111122345689999999998
Q ss_pred CCCccchhHHHHHHHHHHHcCCCCC
Q 006211 615 IYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 615 ~~s~~sDvwslGvil~elltg~~p~ 639 (656)
..+.++|+||+||++|.+..|.++.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i 209 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSI 209 (700)
T ss_pred cccccccceeeeeEEEEEecCCcch
Confidence 8899999999999999999555443
No 488
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.91 E-value=0.0002 Score=68.01 Aligned_cols=133 Identities=18% Similarity=0.278 Sum_probs=92.0
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCC----------------hhhHHHHHHHHHHHHhcC------CCceeeEE
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATS----------------TQGLEEFKNEVSLTARLQ------HVNLLRVL 497 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~niv~l~ 497 (656)
...||+|+.-.||. .+.....+||+..... ....++..+|+.....+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46799999999996 4566778899887655 112345566666555554 78899999
Q ss_pred EEEeeCCceEEEEEecCC--C----ChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEc
Q 006211 498 GYCTERDENMLIYEYLPN--K----SLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLD 571 (656)
Q Consensus 498 ~~~~~~~~~~lv~e~~~~--g----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~ 571 (656)
|+.+++...-+|+|.+.+ | +|..++. ...++. +..+. +-+-..+|-+.+ |+.+|++|.||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~----~~~~~~-~~~~~---L~~f~~~l~~~~---Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLK----EGGLTE-ELRQA---LDEFKRYLLDHH---IVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHH----cCCccH-HHHHH---HHHHHHHHHHcC---CeecCCCcccEEEE
Confidence 999999999999998744 3 3555552 333554 33333 334455666666 99999999999996
Q ss_pred CCC----cEEEEe-ccCcc
Q 006211 572 NEL----NPKISD-FGMAK 585 (656)
Q Consensus 572 ~~~----~~kl~D-fGla~ 585 (656)
... .+.|+| ||...
T Consensus 153 ~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 153 RRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred ecCCCceEEEEEeCCCCcc
Confidence 432 577888 56544
No 489
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.81 E-value=0.00011 Score=69.42 Aligned_cols=105 Identities=20% Similarity=0.148 Sum_probs=81.9
Q ss_pred HHHHHHHHhcCC-CceeeEEEEEeeCCceEEEEEecCCCChhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 006211 479 KNEVSLTARLQH-VNLLRVLGYCTERDENMLIYEYLPNKSLDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFR 557 (656)
Q Consensus 479 ~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~ 557 (656)
..|.-++..+++ +++.+++|.|- .+++.|+...+++...-.....-...+|..+.+|+.++++.+.+|++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 357888888875 59999999994 3788999987655321100011123689999999999999999999866556
Q ss_pred cEecccCCCCEEEcCCCcEEEEeccCcccc
Q 006211 558 VIHRDLKASNILLDNELNPKISDFGMAKLF 587 (656)
Q Consensus 558 iiH~Dikp~NILl~~~~~~kl~DfGla~~~ 587 (656)
+.-.|++|+|+-+++++++|++|.......
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 899999999999999999999999876543
No 490
>PLN02876 acyl-CoA dehydrogenase
Probab=97.80 E-value=0.00029 Score=82.53 Aligned_cols=79 Identities=19% Similarity=0.421 Sum_probs=57.0
Q ss_pred CCcccccCceEEEEEEeCCC---CEEEEEEccCCC-hhhHHHHHHHHHHHHhcC-CCce--eeEEEEEeeC---CceEEE
Q 006211 440 ANKLGEGGFGPVYKGNLPRG---QEFAVKRLSATS-TQGLEEFKNEVSLTARLQ-HVNL--LRVLGYCTER---DENMLI 509 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni--v~l~~~~~~~---~~~~lv 509 (656)
++.++.|....+|+.....+ ..+++|+..... ......+.+|.++++.+. |+++ .+++.+|.+. ...++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 56789999999999876543 467788765432 123346789999999985 6654 7777777654 357899
Q ss_pred EEecCCCCh
Q 006211 510 YEYLPNKSL 518 (656)
Q Consensus 510 ~e~~~~g~L 518 (656)
|||+++..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999988653
No 491
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.75 E-value=2.7e-06 Score=90.77 Aligned_cols=182 Identities=18% Similarity=0.156 Sum_probs=126.2
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc-eeeEEEEEeeCCceEEEEEecCCC-C
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN-LLRVLGYCTERDENMLIYEYLPNK-S 517 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g-~ 517 (656)
.+-+++++++.+++.+-...+....+.+... ....-++++|.+++||| .+..++-+..++..+++++++..+ +
T Consensus 247 fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs 321 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS 321 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence 3557899999999886544444446655443 23356889999999999 667677677777889999999877 2
Q ss_pred hhhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCccccccCccccccc
Q 006211 518 LDLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMAKLFRKDVDEANTG 597 (656)
Q Consensus 518 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 597 (656)
...-. . .....+.+.+...+...-.+++++||+.. =+|+| ||+..+ +..+..||+....+.... ...
T Consensus 322 ~~~~~-~-~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~ 388 (829)
T KOG0576|consen 322 SALEM-T-VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPR 388 (829)
T ss_pred ccccC-C-hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCccc---ccc
Confidence 21110 0 01111223333445555667788888764 48888 887776 478999999887654432 233
Q ss_pred cccccccccccccccCCCCCccchhHHHHHHHHHHHcCCCCC
Q 006211 598 RIVGTYGYVPPEYVKKGIYSMKYDVYSFGVLLLQIISSKRNA 639 (656)
Q Consensus 598 ~~~gt~~y~aPE~~~~~~~s~~sDvwslGvil~elltg~~p~ 639 (656)
...+++.++|||+.....+....|+|++|+-..++--|-+|-
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 457899999999999999999999999998777766665554
No 492
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.74 E-value=0.00049 Score=64.87 Aligned_cols=137 Identities=23% Similarity=0.409 Sum_probs=92.5
Q ss_pred CCCCccccCHHHHHHHhcCCCCCCcccccCc-eEEEEEEeCCCCEEEEEEccC---CCh------------------hhH
Q 006211 418 DTPNLQVFSFSDIKAATNNFSSANKLGEGGF-GPVYKGNLPRGQEFAVKRLSA---TST------------------QGL 475 (656)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~y~~~~~iG~G~~-g~V~~~~~~~~~~vavK~~~~---~~~------------------~~~ 475 (656)
..|.+..|.. -+.+++.++.||.|.. |.||++++ +|+.+|+|.+.. ... ...
T Consensus 25 ~gPKL~~F~~-----h~~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 98 (207)
T PF13095_consen 25 PGPKLEPFTH-----HGDDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYA 98 (207)
T ss_pred CCCCcCCcCC-----CCCcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhc
Confidence 3455555554 1267888999999999 99999998 678999999321 100 112
Q ss_pred HHHHHHHHHHHhcC---CCce--eeEEEEEeeCC------------------ceEEEEEecCCCChhhhhhCCCcCCCCC
Q 006211 476 EEFKNEVSLTARLQ---HVNL--LRVLGYCTERD------------------ENMLIYEYLPNKSLDLYLFDPIRRYVLD 532 (656)
Q Consensus 476 ~~~~~e~~~l~~l~---h~ni--v~l~~~~~~~~------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~ 532 (656)
..|..|++...+|+ +.++ ++.+||..-.. ...||.||++... .++
T Consensus 99 ~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~ 166 (207)
T PF13095_consen 99 DPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ 166 (207)
T ss_pred ChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc
Confidence 35778888877774 4455 88888873220 1246777665532 122
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcEecccCCCCEEEcCCCcEEEEeccCc
Q 006211 533 WQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLKASNILLDNELNPKISDFGMA 584 (656)
Q Consensus 533 ~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dikp~NILl~~~~~~kl~DfGla 584 (656)
.. -+.+|.+-+..+|..+ |+-+|+++.|.. .-+|+|||.+
T Consensus 167 ~~----~~~~~~~dl~~~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 167 IR----DIPQMLRDLKILHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred hh----HHHHHHHHHHHHHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 22 3445666777888887 999999999987 4589999864
No 493
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.72 E-value=0.00029 Score=64.13 Aligned_cols=129 Identities=22% Similarity=0.285 Sum_probs=87.5
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEecCCCCh
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLLRVLGYCTERDENMLIYEYLPNKSL 518 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 518 (656)
..+.|++|.+|.||.|.+ .+..+|+|+-+..+. ...+..|.++|..+.--++-+=+-.+. ...+.|||+.|-.|
T Consensus 26 v~~~L~KG~~s~Vyl~~~-~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg---~~~i~me~i~G~~L 99 (201)
T COG2112 26 VEKELAKGTTSVVYLGEW-RGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYG---EDFIRMEYIDGRPL 99 (201)
T ss_pred hhhhhhcccccEEEEeec-cCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEec---hhhhhhhhhcCcch
Confidence 457899999999999988 456889987766543 357889999999988666554332222 22455999999888
Q ss_pred hhhhhCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecccC-CCCEEEcCCCcEEEEeccCccc
Q 006211 519 DLYLFDPIRRYVLDWQKRVNIIEGVTQGLLYLQEYSNFRVIHRDLK-ASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 519 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~Lh~~~~~~iiH~Dik-p~NILl~~~~~~kl~DfGla~~ 586 (656)
...... .+.++... +++.---|..++ |-|+.|. |...+|.++..+.|+||..|+.
T Consensus 100 ~~~~~~------~~rk~l~~----vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 100 GKLEIG------GDRKHLLR----VLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhc------ccHHHHHH----HHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 765421 12233333 344434455555 8999997 5555555555899999999974
No 494
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.69 E-value=0.00042 Score=68.48 Aligned_cols=73 Identities=18% Similarity=0.258 Sum_probs=44.5
Q ss_pred CcccccCce-EEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCC---ceeeEEEEEeeC---CceEEEEEec
Q 006211 441 NKLGEGGFG-PVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHV---NLLRVLGYCTER---DENMLIYEYL 513 (656)
Q Consensus 441 ~~iG~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~e~~ 513 (656)
+.|+.|+.. .||+. +..+++|..+... ....+.+|.+++..+... -+.+++...... ...+++|+++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~--~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAAG--YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCccc--hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 456766665 58875 2357778655422 234678899998887532 233444433322 2347899999
Q ss_pred CCCChh
Q 006211 514 PNKSLD 519 (656)
Q Consensus 514 ~~g~L~ 519 (656)
+|.++.
T Consensus 77 ~G~~l~ 82 (235)
T cd05155 77 EGETAT 82 (235)
T ss_pred cCCCCC
Confidence 987763
No 495
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.65 E-value=0.00051 Score=67.79 Aligned_cols=73 Identities=18% Similarity=0.255 Sum_probs=47.7
Q ss_pred CcccccCceEEEEEEeCC--CCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCcee-eEEEEEeeCCceEEEEEecCCCC
Q 006211 441 NKLGEGGFGPVYKGNLPR--GQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNLL-RVLGYCTERDENMLIYEYLPNKS 517 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~ 517 (656)
+.|..|-...+|+....+ +..+++|+........ -...+|+.++..+...+++ +++..+. ..+++||++|.+
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~-~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~ 78 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELI-IDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT 78 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccce-ecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence 467788888999997654 6789999776432221 2235688888888543443 3433322 247999999876
Q ss_pred h
Q 006211 518 L 518 (656)
Q Consensus 518 L 518 (656)
+
T Consensus 79 l 79 (235)
T cd05157 79 L 79 (235)
T ss_pred C
Confidence 5
No 496
>PRK10593 hypothetical protein; Provisional
Probab=97.64 E-value=0.001 Score=68.11 Aligned_cols=77 Identities=17% Similarity=0.134 Sum_probs=55.7
Q ss_pred CCCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCC---CceeeEEEEEeeC---CceEEEEEe
Q 006211 439 SANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQH---VNLLRVLGYCTER---DENMLIYEY 512 (656)
Q Consensus 439 ~~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~---~~~~lv~e~ 512 (656)
..+.||.|..+.||+....++ .+.+|..+... ....+..|...++.+.. ..+.+++++|... +..++|||+
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQG-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred eeeecCCccceeEEEEEcCCC-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 456799999999999876555 46777754311 22467889998888843 3577888877543 568999999
Q ss_pred cCCCCh
Q 006211 513 LPNKSL 518 (656)
Q Consensus 513 ~~~g~L 518 (656)
+++.++
T Consensus 95 i~G~~~ 100 (297)
T PRK10593 95 LRGVSV 100 (297)
T ss_pred cCCEec
Confidence 998754
No 497
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.54 E-value=0.00053 Score=68.72 Aligned_cols=139 Identities=17% Similarity=0.142 Sum_probs=78.9
Q ss_pred cccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCce-eeEEEEEeeCCceEEEEEecCCCChhh
Q 006211 442 KLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVNL-LRVLGYCTERDENMLIYEYLPNKSLDL 520 (656)
Q Consensus 442 ~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~L~~ 520 (656)
.+..|-...+|+... +++.+++|+.........-...+|..+++.+...++ .+++.... ..+|+||++|..+..
T Consensus 3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 355677888998874 567888887654322211134678888888854333 33333322 378999999876542
Q ss_pred h-----------------hhCCC-cCCCCCHHHH-HHHHHH---------HHHHHHHHHhc-----CCCCcEecccCCCC
Q 006211 521 Y-----------------LFDPI-RRYVLDWQKR-VNIIEG---------VTQGLLYLQEY-----SNFRVIHRDLKASN 567 (656)
Q Consensus 521 ~-----------------l~~~~-~~~~l~~~~~-~~i~~~---------i~~~l~~Lh~~-----~~~~iiH~Dikp~N 567 (656)
. ++... .....+.... .....+ +.+.+..+... .+..++|+|+.|.|
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N 157 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN 157 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence 1 11111 1111222111 111111 11222222221 12348999999999
Q ss_pred EEEcCCCcEEEEeccCccc
Q 006211 568 ILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 568 ILl~~~~~~kl~DfGla~~ 586 (656)
|++++++ +.|+||..+..
T Consensus 158 il~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 158 LVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEEeCCC-CEEEeccccCc
Confidence 9999886 78999998864
No 498
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of endo-beta-N-acetylglucosaminidases belong to the glycoside hydrolase family 85 (GH85 from CAZY). These enzymes work on a broad spectrum of substrates.; GO: 0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity, 0005737 cytoplasm; PDB: 2W92_A 2W91_A 2VTF_B 3FHQ_B 3FHA_D 3GDB_A.
Probab=97.41 E-value=8e-05 Score=75.87 Aligned_cols=152 Identities=17% Similarity=0.193 Sum_probs=88.8
Q ss_pred HHHHHhhCCCceEEEEeecCCCCccccccCCcCCCccccccccC-ChhhHHHHHHHHHHHHHHcCCCcceeeeeCCCc--
Q 006211 80 ANSVRRKNPSIKTLLSIWNGQNSTYQSILGNKNINPSVLSSMVG-DSSHRKSFIESSIRTARLYGFQGIDLFWLWPNS-- 156 (656)
Q Consensus 80 ~~~~k~~~~~~kvl~sigg~~~~~~~~~~Gg~~~~~~~f~~~~~-~~~~r~~fi~~~~~~~~~~~~DGvdidwe~p~~-- 156 (656)
+.+++++ +||||=.|- | .|+.+.+.+..++. +++....+++.++++++.|||||.-|+||.+..
T Consensus 48 idaAHrn--GV~vLGTii----------f-e~~~~~~~~~~ll~~~~~g~~~~A~kLi~ia~~yGFDGw~iN~E~~~~~~ 114 (311)
T PF03644_consen 48 IDAAHRN--GVKVLGTII----------F-EWGGGAEWCEELLEKDEDGSFPYADKLIEIAKYYGFDGWLINIETPLSGP 114 (311)
T ss_dssp HHHHHHT--T--EEEEEE----------E-EEE--HHHHHHHT---TTS--HHHHHHHHHHHHHT--EEEEEEEESSTTG
T ss_pred HHHHHhc--CceEEEEEE----------e-cCCchHHHHHHHHcCCcccccHHHHHHHHHHHHcCCCceEEEecccCCch
Confidence 3445554 899998871 1 22222334678888 888999999999999999999999999998865
Q ss_pred cCcchHHHHHHHHHhhcCCCCCcEEEE--Eeec-CCCccccccChhhhhhccchhhhhhhcccCCCCCCccccCCCCCCC
Q 006211 157 TDLNSLGILLDEWKASASDQPELTLSM--AVRY-SPTHETVSYPIDSMKKNLNWAHLVAYDYHMPSKENVTGIHAALYNP 233 (656)
Q Consensus 157 ~d~~~~~~ll~~lr~~l~~~~~~~ls~--a~~~-~~~~~~~~~~~~~l~~~vD~invmtYD~~g~~~~~~~g~~apl~~~ 233 (656)
.+..++..|+++|+++++..++..+.- ++.. +...++. .....+.++...
T Consensus 115 ~~~~~l~~F~~~l~~~~~~~~~~~v~WYDs~t~~G~l~~qn---------------------------~Ln~~N~~f~~~ 167 (311)
T PF03644_consen 115 EDAENLIDFLKYLRKEAHENPGSEVIWYDSVTNSGRLSWQN---------------------------ELNDKNKPFFDV 167 (311)
T ss_dssp GGHHHHHHHHHHHHHHHHHT-T-EEEEES-B-SSSSB---S---------------------------SS-TTTGGGBES
T ss_pred hHHHHHHHHHHHHHHHhhcCCCcEEEEeecCCcCCccchHH---------------------------HHHhhCcchhhh
Confidence 588999999999999995422333322 1110 0111111 111122222111
Q ss_pred CC---------CCCHHHHHHHHHHcCCCCCceeecccCCCCCcCCCC
Q 006211 234 SS---------NISTDFGIREWLRRGFPANKLVLGARASGPGITIDG 271 (656)
Q Consensus 234 ~~---------~~~~~~~v~~~~~~g~p~~Kl~lG~p~yG~~~~~~g 271 (656)
++ ..+...+++...+.|.++.++.+|+-..||+....|
T Consensus 168 ~d~iFlNY~W~~~~l~~s~~~A~~~~~~~~~vy~GiDv~grg~~g~g 214 (311)
T PF03644_consen 168 CDGIFLNYNWNPDSLESSVANAKSRGRDPYDVYAGIDVFGRGTYGGG 214 (311)
T ss_dssp -SEEEE-S--SHHHHHHHHHHHHHHTS-GGGEEEEEEHHHHT-GGG-
T ss_pred cceeeEecCCCcccHHHHHHHHHHcCCCHHHEEEEEEEEcCCcccCC
Confidence 11 024678888888999999999999999998743333
No 499
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.37 E-value=0.0027 Score=65.14 Aligned_cols=143 Identities=17% Similarity=0.143 Sum_probs=83.7
Q ss_pred CCcccccCceEEEEEEeCCCCEEEEEEccCCChhhHHHHHHHHHHHHhcCCCc--eeeEEEE------EeeCCceEEEEE
Q 006211 440 ANKLGEGGFGPVYKGNLPRGQEFAVKRLSATSTQGLEEFKNEVSLTARLQHVN--LLRVLGY------CTERDENMLIYE 511 (656)
Q Consensus 440 ~~~iG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv~e 511 (656)
.+.|..|....+|+....+ ..+++|+.... ....+..|+.++..+.+.+ +.+++.. ....+..+++++
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 4567778888999986644 47888987652 2345567777777774332 3444331 122345689999
Q ss_pred ecCCCChhh----h----------hhCC----Cc----CCCCCHHHHH----------HHHHHHHHHHHHHHh----cCC
Q 006211 512 YLPNKSLDL----Y----------LFDP----IR----RYVLDWQKRV----------NIIEGVTQGLLYLQE----YSN 555 (656)
Q Consensus 512 ~~~~g~L~~----~----------l~~~----~~----~~~l~~~~~~----------~i~~~i~~~l~~Lh~----~~~ 555 (656)
+++|..+.. . ++.. .. .....|.... .....+...+.++.. .-+
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 999876532 0 0100 00 0011111110 011122334444443 122
Q ss_pred CCcEecccCCCCEEEcCCCcEEEEeccCccc
Q 006211 556 FRVIHRDLKASNILLDNELNPKISDFGMAKL 586 (656)
Q Consensus 556 ~~iiH~Dikp~NILl~~~~~~kl~DfGla~~ 586 (656)
..++|+|+.|.||+++++..+.|+||+.+..
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 3599999999999999987778999998754
No 500
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.28 E-value=0.0042 Score=65.58 Aligned_cols=75 Identities=16% Similarity=0.246 Sum_probs=52.5
Q ss_pred CcccccCceEEEEEEeCCC-CEEEEEEccCC-----C--hhhHHHHHHHHHHHHhcC---CCceeeEEEEEeeCCceEEE
Q 006211 441 NKLGEGGFGPVYKGNLPRG-QEFAVKRLSAT-----S--TQGLEEFKNEVSLTARLQ---HVNLLRVLGYCTERDENMLI 509 (656)
Q Consensus 441 ~~iG~G~~g~V~~~~~~~~-~~vavK~~~~~-----~--~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv 509 (656)
+.||.|.+..||++...+| +.++||.-... . ....++...|.+.|..+. ..++.+++.+ +....++|
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV 109 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV 109 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence 5799999999999988776 48999975321 1 123456677888877762 2356666655 44567899
Q ss_pred EEecCCCC
Q 006211 510 YEYLPNKS 517 (656)
Q Consensus 510 ~e~~~~g~ 517 (656)
||++++..
T Consensus 110 ME~L~~~~ 117 (401)
T PRK09550 110 MEDLSDHK 117 (401)
T ss_pred EecCCCcc
Confidence 99998643
Done!