Query 006212
Match_columns 656
No_of_seqs 494 out of 2927
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 19:00:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygy_A PGDH, D-3-phosphoglycer 100.0 4E-100 1E-104 860.6 62.1 526 88-633 2-529 (529)
2 1sc6_A PGDH, D-3-phosphoglycer 100.0 9.9E-77 3.4E-81 647.9 44.1 391 89-630 3-403 (404)
3 3k5p_A D-3-phosphoglycerate de 100.0 2.5E-70 8.6E-75 596.3 43.3 393 88-630 13-415 (416)
4 4g2n_A D-isomer specific 2-hyd 100.0 1.2E-67 4.1E-72 564.8 39.4 313 87-402 25-345 (345)
5 4e5n_A Thermostable phosphite 100.0 2.5E-66 8.5E-71 552.6 37.1 314 90-404 2-328 (330)
6 4dgs_A Dehydrogenase; structur 100.0 1.9E-65 6.4E-70 546.9 31.6 311 86-402 26-340 (340)
7 3kb6_A D-lactate dehydrogenase 100.0 7.3E-65 2.5E-69 542.0 30.0 274 127-402 39-328 (334)
8 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 4.3E-63 1.5E-67 528.3 36.9 310 88-399 24-334 (335)
9 2pi1_A D-lactate dehydrogenase 100.0 3.6E-64 1.2E-68 536.6 28.4 311 92-404 2-330 (334)
10 3gg9_A D-3-phosphoglycerate de 100.0 2.9E-63 1E-67 532.8 33.6 316 91-410 3-341 (352)
11 4hy3_A Phosphoglycerate oxidor 100.0 3.8E-63 1.3E-67 533.2 32.2 309 91-403 28-349 (365)
12 2yq5_A D-isomer specific 2-hyd 100.0 4.5E-63 1.5E-67 529.1 31.2 313 90-404 1-334 (343)
13 3hg7_A D-isomer specific 2-hyd 100.0 1.3E-63 4.6E-68 529.4 26.7 311 88-406 3-315 (324)
14 3jtm_A Formate dehydrogenase, 100.0 8.8E-63 3E-67 528.6 32.3 313 89-402 18-341 (351)
15 1wwk_A Phosphoglycerate dehydr 100.0 5.7E-62 1.9E-66 514.4 36.9 304 90-394 3-307 (307)
16 3evt_A Phosphoglycerate dehydr 100.0 2.8E-63 9.5E-68 527.4 24.8 309 90-404 1-313 (324)
17 1j4a_A D-LDH, D-lactate dehydr 100.0 7.5E-61 2.6E-65 511.2 34.5 310 91-403 2-332 (333)
18 1gdh_A D-glycerate dehydrogena 100.0 3.8E-60 1.3E-64 503.2 39.3 305 91-398 2-315 (320)
19 2ekl_A D-3-phosphoglycerate de 100.0 2.2E-60 7.4E-65 503.6 37.1 304 90-397 5-312 (313)
20 1dxy_A D-2-hydroxyisocaproate 100.0 5.7E-61 1.9E-65 512.1 29.7 310 92-404 2-331 (333)
21 2cuk_A Glycerate dehydrogenase 100.0 7.6E-60 2.6E-64 499.0 35.5 304 91-401 1-310 (311)
22 1xdw_A NAD+-dependent (R)-2-hy 100.0 2.1E-60 7.3E-65 507.3 31.3 308 92-402 2-331 (331)
23 2j6i_A Formate dehydrogenase; 100.0 1.9E-60 6.5E-65 513.6 30.4 313 89-402 16-348 (364)
24 2w2k_A D-mandelate dehydrogena 100.0 1.4E-59 4.6E-64 504.3 35.6 320 89-409 2-345 (348)
25 2nac_A NAD-dependent formate d 100.0 1E-59 3.6E-64 510.9 34.7 297 105-402 61-366 (393)
26 2d0i_A Dehydrogenase; structur 100.0 2.7E-59 9.2E-64 499.2 34.7 312 90-404 2-320 (333)
27 3ba1_A HPPR, hydroxyphenylpyru 100.0 3.5E-59 1.2E-63 498.0 35.5 309 88-402 21-333 (333)
28 1mx3_A CTBP1, C-terminal bindi 100.0 7.8E-59 2.7E-63 497.7 34.7 317 85-402 16-346 (347)
29 2dbq_A Glyoxylate reductase; D 100.0 2.7E-58 9.1E-63 491.8 37.2 312 90-403 2-323 (334)
30 2gcg_A Glyoxylate reductase/hy 100.0 5.7E-58 1.9E-62 488.4 36.7 315 89-403 7-330 (330)
31 3pp8_A Glyoxylate/hydroxypyruv 100.0 2.2E-58 7.5E-63 488.2 27.4 296 90-403 3-311 (315)
32 1qp8_A Formate dehydrogenase; 100.0 4.5E-57 1.5E-61 476.1 28.8 293 92-404 2-298 (303)
33 3oet_A Erythronate-4-phosphate 100.0 1.6E-55 5.6E-60 474.9 27.8 279 89-397 2-286 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 9.3E-55 3.2E-59 455.2 22.5 278 92-397 2-285 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 1.1E-52 3.7E-57 453.8 28.9 281 91-399 1-285 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.2E-37 4.1E-42 344.4 2.6 272 152-451 192-474 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 7.8E-38 2.7E-42 347.1 -1.0 271 152-451 212-489 (494)
38 3d4o_A Dipicolinate synthase s 100.0 7.3E-28 2.5E-32 251.9 16.7 206 88-323 3-248 (293)
39 3ce6_A Adenosylhomocysteinase; 99.9 1.2E-27 4.2E-32 266.1 2.3 271 153-450 210-488 (494)
40 2rir_A Dipicolinate synthase, 99.9 1.3E-25 4.3E-30 235.6 14.9 210 88-323 5-250 (300)
41 2vhw_A Alanine dehydrogenase; 99.9 1.9E-22 6.5E-27 218.3 20.2 245 99-375 18-307 (377)
42 2eez_A Alanine dehydrogenase; 99.8 2E-18 6.9E-23 186.1 16.0 277 98-402 17-341 (369)
43 1x13_A NAD(P) transhydrogenase 99.8 2.4E-18 8.3E-23 187.6 15.8 220 99-326 25-301 (401)
44 1gtm_A Glutamate dehydrogenase 99.8 2.1E-19 7.1E-24 196.5 5.2 155 223-392 205-385 (419)
45 1l7d_A Nicotinamide nucleotide 99.7 3E-17 1E-21 177.9 18.1 220 99-323 18-300 (384)
46 3h9u_A Adenosylhomocysteinase; 99.7 7.3E-17 2.5E-21 175.9 14.4 182 131-331 123-311 (436)
47 3ggo_A Prephenate dehydrogenas 99.7 1.7E-18 5.9E-23 182.9 1.0 245 226-490 30-299 (314)
48 3n58_A Adenosylhomocysteinase; 99.7 4.3E-16 1.5E-20 169.7 13.4 161 153-331 183-347 (464)
49 3ktd_A Prephenate dehydrogenas 99.6 7.3E-18 2.5E-22 180.0 -1.8 250 229-492 8-279 (341)
50 1gpj_A Glutamyl-tRNA reductase 99.6 2.6E-17 9E-22 179.6 0.6 210 153-396 81-326 (404)
51 3gvp_A Adenosylhomocysteinase 99.6 9.7E-15 3.3E-19 158.9 13.2 159 153-329 156-318 (435)
52 2g5c_A Prephenate dehydrogenas 99.5 5.4E-15 1.8E-19 152.5 6.0 234 230-483 2-260 (281)
53 3b1f_A Putative prephenate deh 99.4 6E-14 2E-18 145.3 1.6 234 230-483 7-268 (290)
54 2pv7_A T-protein [includes: ch 99.3 1.6E-13 5.6E-18 143.4 2.4 240 206-490 3-263 (298)
55 3p2y_A Alanine dehydrogenase/p 99.2 4E-10 1.4E-14 121.4 21.5 216 99-319 40-302 (381)
56 3obb_A Probable 3-hydroxyisobu 99.2 1.4E-11 4.9E-16 129.1 8.6 113 230-344 4-120 (300)
57 3l6d_A Putative oxidoreductase 99.2 1.3E-11 4.6E-16 129.3 8.0 126 225-350 5-132 (306)
58 4dll_A 2-hydroxy-3-oxopropiona 99.2 1.5E-11 5.2E-16 129.7 8.0 130 210-339 7-144 (320)
59 2f1k_A Prephenate dehydrogenas 99.2 5.2E-12 1.8E-16 129.8 3.6 222 230-473 1-246 (279)
60 4gbj_A 6-phosphogluconate dehy 99.2 1.5E-11 5.2E-16 128.7 7.1 120 230-349 6-127 (297)
61 3doj_A AT3G25530, dehydrogenas 99.2 4.3E-11 1.5E-15 125.6 9.5 115 224-338 16-134 (310)
62 4dio_A NAD(P) transhydrogenase 99.2 1.1E-09 3.8E-14 118.8 20.2 218 99-319 43-312 (405)
63 1c1d_A L-phenylalanine dehydro 99.2 2.9E-10 1E-14 121.6 14.9 109 224-339 169-280 (355)
64 4ezb_A Uncharacterized conserv 99.1 1E-10 3.5E-15 123.3 11.2 137 208-349 5-151 (317)
65 1np3_A Ketol-acid reductoisome 99.1 1.3E-11 4.5E-16 131.3 3.9 137 225-371 12-156 (338)
66 3qsg_A NAD-binding phosphogluc 99.1 1.2E-10 4E-15 122.5 11.0 140 209-350 2-150 (312)
67 2d5c_A AROE, shikimate 5-dehyd 99.1 1.6E-11 5.6E-16 125.8 4.3 176 118-335 37-220 (263)
68 3qha_A Putative oxidoreductase 99.1 7.9E-11 2.7E-15 122.8 9.5 108 229-338 15-124 (296)
69 4e21_A 6-phosphogluconate dehy 99.1 1.3E-10 4.5E-15 124.7 11.0 121 227-349 20-145 (358)
70 3pef_A 6-phosphogluconate dehy 99.1 1.1E-10 3.8E-15 120.7 8.9 109 230-338 2-114 (287)
71 4e12_A Diketoreductase; oxidor 99.1 9.2E-10 3.1E-14 113.9 15.3 130 230-371 5-162 (283)
72 3pdu_A 3-hydroxyisobutyrate de 99.1 1.3E-10 4.4E-15 120.3 7.1 109 230-338 2-114 (287)
73 3ond_A Adenosylhomocysteinase; 99.1 5.9E-10 2E-14 123.3 12.7 152 153-322 201-355 (488)
74 3g0o_A 3-hydroxyisobutyrate de 99.1 1.5E-10 5.2E-15 120.8 7.6 110 229-338 7-121 (303)
75 2h78_A Hibadh, 3-hydroxyisobut 99.0 4.3E-10 1.5E-14 116.9 8.6 107 230-336 4-114 (302)
76 2hk9_A Shikimate dehydrogenase 99.0 3.5E-10 1.2E-14 116.8 7.1 165 118-320 48-222 (275)
77 3fr7_A Putative ketol-acid red 98.9 1.1E-09 3.8E-14 120.5 6.5 104 214-321 39-156 (525)
78 4gwg_A 6-phosphogluconate dehy 98.9 2.6E-09 9E-14 118.8 9.6 120 229-349 4-133 (484)
79 1vpd_A Tartronate semialdehyde 98.9 1.9E-09 6.3E-14 111.7 7.6 107 230-336 6-116 (299)
80 3dtt_A NADP oxidoreductase; st 98.9 1.4E-09 4.7E-14 110.3 5.8 101 216-319 6-124 (245)
81 2zyd_A 6-phosphogluconate dehy 98.9 3.9E-09 1.3E-13 117.5 9.2 112 226-338 12-132 (480)
82 2dpo_A L-gulonate 3-dehydrogen 98.8 2E-08 6.9E-13 106.1 13.6 131 229-371 6-164 (319)
83 2gf2_A Hibadh, 3-hydroxyisobut 98.8 3E-09 1E-13 110.0 7.0 106 230-335 1-110 (296)
84 3cky_A 2-hydroxymethyl glutara 98.8 3.4E-09 1.2E-13 109.7 7.4 107 230-336 5-115 (301)
85 1zej_A HBD-9, 3-hydroxyacyl-CO 98.8 1.2E-08 4.2E-13 106.5 11.6 127 227-369 10-146 (293)
86 3k6j_A Protein F01G10.3, confi 98.8 2.9E-08 9.9E-13 109.6 15.0 167 182-369 11-205 (460)
87 1yb4_A Tartronic semialdehyde 98.8 3.4E-09 1.2E-13 109.4 6.8 106 230-336 4-113 (295)
88 2cvz_A Dehydrogenase, 3-hydrox 98.8 4.6E-09 1.6E-13 107.9 7.3 105 230-336 2-107 (289)
89 2yjz_A Metalloreductase steap4 98.3 5E-10 1.7E-14 110.6 0.0 93 227-323 17-109 (201)
90 2p4q_A 6-phosphogluconate dehy 98.8 1.3E-08 4.4E-13 113.8 10.6 107 229-336 10-126 (497)
91 2uyy_A N-PAC protein; long-cha 98.8 7.9E-09 2.7E-13 108.1 8.2 106 230-335 31-140 (316)
92 1i36_A Conserved hypothetical 98.8 1.1E-08 3.7E-13 104.1 8.3 102 230-336 1-105 (264)
93 2iz1_A 6-phosphogluconate dehy 98.7 2.5E-08 8.5E-13 110.8 9.9 117 230-347 6-131 (474)
94 2pgd_A 6-phosphogluconate dehy 98.7 2.8E-08 9.4E-13 110.7 9.7 118 230-348 3-130 (482)
95 1leh_A Leucine dehydrogenase; 98.7 4.2E-08 1.4E-12 105.4 9.8 106 226-338 170-278 (364)
96 2iaf_A Hypothetical protein SD 98.7 1.5E-08 5E-13 95.5 5.4 110 420-543 12-144 (151)
97 1pjc_A Protein (L-alanine dehy 98.7 4.8E-07 1.6E-11 96.9 17.8 180 130-319 66-267 (361)
98 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.6 4.2E-08 1.4E-12 109.1 8.6 117 231-348 3-132 (478)
99 3d1l_A Putative NADP oxidoredu 98.6 1.9E-08 6.6E-13 102.4 5.3 101 223-325 4-108 (266)
100 3c24_A Putative oxidoreductase 98.6 3E-08 1E-12 102.4 6.1 91 230-322 12-104 (286)
101 2q3e_A UDP-glucose 6-dehydroge 98.6 8.8E-08 3E-12 106.2 10.2 134 230-365 6-181 (467)
102 2vns_A Metalloreductase steap3 98.6 3.4E-08 1.2E-12 98.1 5.9 94 228-325 27-121 (215)
103 3pid_A UDP-glucose 6-dehydroge 98.5 3E-07 1E-11 100.9 11.3 115 222-338 29-172 (432)
104 2raf_A Putative dinucleotide-b 98.5 1.2E-07 4.2E-12 93.7 7.4 81 224-323 14-94 (209)
105 1f0y_A HCDH, L-3-hydroxyacyl-C 98.5 9.9E-07 3.4E-11 91.7 14.7 114 230-347 16-161 (302)
106 3oj0_A Glutr, glutamyl-tRNA re 98.5 1.7E-07 5.8E-12 86.8 7.9 87 229-321 21-112 (144)
107 3gt0_A Pyrroline-5-carboxylate 98.5 1.7E-07 5.8E-12 94.7 6.9 102 230-335 3-111 (247)
108 3tri_A Pyrroline-5-carboxylate 98.5 5.4E-07 1.8E-11 93.2 10.8 109 229-341 3-119 (280)
109 2izz_A Pyrroline-5-carboxylate 98.5 2.3E-07 7.9E-12 97.7 8.0 103 229-335 22-132 (322)
110 3mog_A Probable 3-hydroxybutyr 98.4 9.4E-07 3.2E-11 98.4 11.5 128 229-369 5-159 (483)
111 2ahr_A Putative pyrroline carb 98.4 6.2E-07 2.1E-11 90.8 8.9 99 230-336 4-105 (259)
112 4a7p_A UDP-glucose dehydrogena 98.4 1.3E-06 4.4E-11 96.3 11.2 105 230-335 9-145 (446)
113 2i99_A MU-crystallin homolog; 98.3 1.4E-06 4.7E-11 91.5 10.3 90 228-323 134-230 (312)
114 1yqg_A Pyrroline-5-carboxylate 98.3 4E-07 1.4E-11 92.2 5.7 98 230-336 1-103 (263)
115 3gg2_A Sugar dehydrogenase, UD 98.3 1.3E-06 4.4E-11 96.5 9.8 105 230-335 3-138 (450)
116 1zcj_A Peroxisomal bifunctiona 98.3 3.5E-06 1.2E-10 93.3 13.3 113 229-346 37-174 (463)
117 1mv8_A GMD, GDP-mannose 6-dehy 98.3 1.2E-06 4E-11 96.2 8.5 105 230-335 1-140 (436)
118 3dfu_A Uncharacterized protein 98.3 3.1E-06 1.1E-10 85.4 10.7 70 229-319 6-75 (232)
119 3p2o_A Bifunctional protein fo 98.3 9.6E-06 3.3E-10 83.9 14.5 81 223-322 154-235 (285)
120 1y7p_A Hypothetical protein AF 98.2 1.7E-06 5.7E-11 85.6 7.4 73 559-631 5-80 (223)
121 1bg6_A N-(1-D-carboxylethyl)-L 98.2 3E-06 1E-10 89.5 9.7 87 230-318 5-108 (359)
122 2rcy_A Pyrroline carboxylate r 98.2 1.4E-06 4.6E-11 88.3 6.3 98 229-336 4-106 (262)
123 2ew2_A 2-dehydropantoate 2-red 98.2 1.8E-06 6E-11 89.2 7.2 107 230-339 4-127 (316)
124 1txg_A Glycerol-3-phosphate de 98.2 2.3E-06 7.8E-11 89.6 7.6 90 230-322 1-107 (335)
125 3ulk_A Ketol-acid reductoisome 98.2 3.3E-06 1.1E-10 91.6 8.8 93 226-321 34-133 (491)
126 1jay_A Coenzyme F420H2:NADP+ o 98.2 1.7E-06 5.7E-11 84.8 5.9 114 230-350 1-136 (212)
127 2y0c_A BCEC, UDP-glucose dehyd 98.1 4.2E-06 1.4E-10 93.1 9.2 104 229-333 8-142 (478)
128 1dlj_A UDP-glucose dehydrogena 98.1 5.5E-06 1.9E-10 90.0 9.9 106 230-338 1-136 (402)
129 3k96_A Glycerol-3-phosphate de 98.1 2.6E-06 8.7E-11 91.3 7.1 94 229-324 29-138 (356)
130 4huj_A Uncharacterized protein 98.1 2.4E-06 8.1E-11 84.9 5.8 89 229-321 23-115 (220)
131 3ojo_A CAP5O; rossmann fold, c 98.1 7.1E-06 2.4E-10 90.0 10.0 105 227-332 9-142 (431)
132 1x0v_A GPD-C, GPDH-C, glycerol 98.1 3.9E-06 1.3E-10 88.7 7.4 92 230-323 9-128 (354)
133 1wdk_A Fatty oxidation complex 98.0 1.2E-05 4.1E-10 93.7 11.0 113 230-347 315-454 (715)
134 2o3j_A UDP-glucose 6-dehydroge 98.0 6.9E-06 2.4E-10 91.3 8.5 106 230-335 10-151 (481)
135 1evy_A Glycerol-3-phosphate de 98.0 1.6E-06 5.6E-11 92.4 3.1 91 231-322 17-127 (366)
136 3ado_A Lambda-crystallin; L-gu 98.0 4.5E-05 1.5E-09 80.4 13.5 131 229-369 6-164 (319)
137 3g79_A NDP-N-acetyl-D-galactos 98.0 1.1E-05 3.8E-10 89.5 9.0 101 230-330 19-158 (478)
138 2wtb_A MFP2, fatty acid multif 98.0 2.5E-05 8.4E-10 91.1 12.1 113 230-347 313-452 (725)
139 1yj8_A Glycerol-3-phosphate de 98.0 4.9E-06 1.7E-10 89.2 5.7 90 230-321 22-143 (375)
140 1b0a_A Protein (fold bifunctio 98.0 1.4E-05 4.9E-10 82.6 8.7 82 223-323 153-235 (288)
141 1ks9_A KPA reductase;, 2-dehyd 98.0 6.1E-06 2.1E-10 84.2 5.8 90 230-321 1-99 (291)
142 4a5o_A Bifunctional protein fo 97.9 1.9E-05 6.4E-10 81.7 9.1 81 223-322 155-236 (286)
143 4a26_A Putative C-1-tetrahydro 97.9 1.7E-05 5.9E-10 82.5 8.9 81 223-322 159-242 (300)
144 3l07_A Bifunctional protein fo 97.9 2.2E-05 7.5E-10 81.2 9.5 81 223-322 155-236 (285)
145 1z82_A Glycerol-3-phosphate de 97.9 1.4E-05 4.8E-10 84.2 8.2 86 229-321 14-113 (335)
146 2qyt_A 2-dehydropantoate 2-red 97.9 4.1E-06 1.4E-10 86.8 4.0 104 230-336 9-133 (317)
147 2c2x_A Methylenetetrahydrofola 97.9 2.3E-05 7.8E-10 80.9 9.5 110 223-374 152-264 (281)
148 3phh_A Shikimate dehydrogenase 97.9 2E-05 6.8E-10 81.2 9.1 105 229-336 118-224 (269)
149 2dc1_A L-aspartate dehydrogena 97.9 2E-05 6.7E-10 79.1 8.4 94 231-335 2-100 (236)
150 1a4i_A Methylenetetrahydrofola 97.9 2.9E-05 1E-09 80.8 9.7 82 223-323 159-241 (301)
151 1edz_A 5,10-methylenetetrahydr 97.9 9.8E-06 3.4E-10 85.3 6.0 93 223-321 171-277 (320)
152 3ngx_A Bifunctional protein fo 97.9 2.8E-05 9.6E-10 80.0 9.2 77 227-322 148-225 (276)
153 3c85_A Putative glutathione-re 97.9 6.6E-06 2.3E-10 78.8 4.3 94 224-319 34-139 (183)
154 3don_A Shikimate dehydrogenase 97.9 1.6E-05 5.6E-10 82.2 7.3 97 224-323 112-214 (277)
155 1y81_A Conserved hypothetical 97.9 1E-05 3.5E-10 75.0 5.2 101 227-338 12-117 (138)
156 2egg_A AROE, shikimate 5-dehyd 97.9 4.8E-05 1.6E-09 79.3 10.6 94 225-321 137-242 (297)
157 3hdj_A Probable ornithine cycl 97.9 7.1E-05 2.4E-09 78.7 11.8 88 228-321 120-215 (313)
158 3ghy_A Ketopantoate reductase 97.8 1.2E-05 4.1E-10 84.9 5.8 90 229-321 3-106 (335)
159 3i83_A 2-dehydropantoate 2-red 97.8 5.9E-05 2E-09 79.0 10.3 106 230-339 3-124 (320)
160 2ko1_A CTR148A, GTP pyrophosph 97.8 4.7E-05 1.6E-09 63.9 7.4 70 560-631 7-79 (88)
161 2g1u_A Hypothetical protein TM 97.8 3.9E-05 1.3E-09 71.6 7.2 99 222-322 12-121 (155)
162 2i76_A Hypothetical protein; N 97.7 4.3E-06 1.5E-10 85.9 0.2 85 230-321 3-91 (276)
163 3u62_A Shikimate dehydrogenase 97.7 6E-05 2.1E-09 76.9 8.1 100 227-336 107-214 (253)
164 3hn2_A 2-dehydropantoate 2-red 97.7 0.00011 3.9E-09 76.6 10.3 106 230-340 3-123 (312)
165 2duw_A Putative COA-binding pr 97.7 1.9E-05 6.4E-10 73.8 3.5 101 229-338 13-118 (145)
166 3fwz_A Inner membrane protein 97.7 3.7E-05 1.3E-09 70.6 5.4 89 229-319 7-105 (140)
167 1x7d_A Ornithine cyclodeaminas 97.6 0.00011 3.9E-09 78.3 9.5 90 228-321 128-228 (350)
168 3hwr_A 2-dehydropantoate 2-red 97.6 8.2E-05 2.8E-09 78.0 7.7 103 227-334 17-134 (318)
169 1lss_A TRK system potassium up 97.6 0.00013 4.3E-09 65.7 7.9 88 229-318 4-102 (140)
170 3ic5_A Putative saccharopine d 97.5 0.00011 3.8E-09 64.0 5.6 87 228-319 4-100 (118)
171 3o8q_A Shikimate 5-dehydrogena 97.5 9.1E-05 3.1E-09 76.7 5.6 95 224-321 121-223 (281)
172 1omo_A Alanine dehydrogenase; 97.4 0.00036 1.2E-08 73.5 9.5 86 228-320 124-218 (322)
173 1nyt_A Shikimate 5-dehydrogena 97.4 0.00034 1.2E-08 71.6 9.0 95 225-322 115-217 (271)
174 3llv_A Exopolyphosphatase-rela 97.4 0.00016 5.4E-09 65.9 5.7 65 228-292 5-79 (141)
175 2z2v_A Hypothetical protein PH 97.4 0.00013 4.6E-09 78.1 5.5 91 224-320 11-109 (365)
176 3c7a_A Octopine dehydrogenase; 97.4 0.00028 9.5E-09 76.1 8.0 87 230-318 3-115 (404)
177 3ego_A Probable 2-dehydropanto 97.4 0.00022 7.4E-09 74.4 6.8 104 230-339 3-118 (307)
178 2hmt_A YUAA protein; RCK, KTN, 97.3 0.00015 5E-09 65.5 4.6 93 227-321 4-106 (144)
179 1p77_A Shikimate 5-dehydrogena 97.3 0.00019 6.6E-09 73.6 5.9 72 224-295 114-192 (272)
180 4hkt_A Inositol 2-dehydrogenas 97.3 0.00043 1.5E-08 72.5 8.4 64 230-293 4-73 (331)
181 3zwc_A Peroxisomal bifunctiona 97.3 0.0015 5E-08 76.2 13.6 130 230-369 317-470 (742)
182 3pwz_A Shikimate dehydrogenase 97.3 0.00062 2.1E-08 70.1 9.3 95 224-321 115-217 (272)
183 3euw_A MYO-inositol dehydrogen 97.2 0.00061 2.1E-08 71.7 8.5 64 230-293 5-75 (344)
184 2qrj_A Saccharopine dehydrogen 97.2 0.00025 8.6E-09 76.5 5.4 83 228-319 213-300 (394)
185 3db2_A Putative NADPH-dependen 97.2 0.00065 2.2E-08 71.9 8.1 65 230-294 6-77 (354)
186 2f1f_A Acetolactate synthase i 97.2 0.00047 1.6E-08 65.8 6.2 74 558-631 3-78 (164)
187 2ewd_A Lactate dehydrogenase,; 97.2 0.00063 2.2E-08 71.2 7.7 101 229-331 4-133 (317)
188 4b4u_A Bifunctional protein fo 97.2 0.0011 3.7E-08 69.0 9.2 79 223-320 173-252 (303)
189 3fbt_A Chorismate mutase and s 97.1 0.0012 4.1E-08 68.4 9.5 93 224-320 117-215 (282)
190 1vl6_A Malate oxidoreductase; 97.1 0.0028 9.4E-08 68.2 12.2 94 223-321 186-296 (388)
191 1hyh_A L-hicdh, L-2-hydroxyiso 97.1 0.00075 2.6E-08 70.3 7.6 63 230-293 2-79 (309)
192 3vtf_A UDP-glucose 6-dehydroge 97.1 0.00059 2E-08 74.9 7.0 94 229-323 21-148 (444)
193 1a5z_A L-lactate dehydrogenase 97.0 0.0015 5.1E-08 68.5 9.4 64 230-294 1-78 (319)
194 3e9m_A Oxidoreductase, GFO/IDH 97.0 0.00097 3.3E-08 69.9 7.9 65 230-294 6-78 (330)
195 1nvt_A Shikimate 5'-dehydrogen 97.0 0.00072 2.5E-08 69.7 6.8 94 225-321 124-232 (287)
196 3jyo_A Quinate/shikimate dehyd 97.0 0.00082 2.8E-08 69.5 7.1 93 225-320 123-230 (283)
197 3tnl_A Shikimate dehydrogenase 97.0 0.0014 4.7E-08 68.9 8.8 96 224-321 149-265 (315)
198 1guz_A Malate dehydrogenase; o 97.0 0.0027 9.4E-08 66.2 11.0 88 230-319 1-118 (310)
199 1tlt_A Putative oxidoreductase 97.0 0.0017 5.8E-08 67.6 9.4 102 230-336 6-115 (319)
200 2ho3_A Oxidoreductase, GFO/IDH 97.0 0.0017 5.7E-08 67.8 8.8 100 231-335 3-111 (325)
201 3q2i_A Dehydrogenase; rossmann 97.0 0.0008 2.7E-08 71.2 6.4 63 230-292 14-84 (354)
202 2i6u_A Otcase, ornithine carba 97.0 0.018 6E-07 60.2 16.3 125 174-319 114-265 (307)
203 1id1_A Putative potassium chan 96.9 0.0011 3.6E-08 61.5 6.4 90 228-319 2-105 (153)
204 1xea_A Oxidoreductase, GFO/IDH 96.9 0.0014 4.9E-08 68.3 8.1 102 230-336 3-113 (323)
205 2glx_A 1,5-anhydro-D-fructose 96.9 0.0015 5E-08 68.2 8.1 63 231-293 2-72 (332)
206 2pc6_A Probable acetolactate s 96.9 0.00071 2.4E-08 64.6 5.1 73 559-631 5-79 (165)
207 3uuw_A Putative oxidoreductase 96.9 0.0011 3.8E-08 68.6 6.8 64 229-292 6-75 (308)
208 1pg5_A Aspartate carbamoyltran 96.9 0.0074 2.5E-07 62.9 13.0 94 226-319 146-260 (299)
209 2ef0_A Ornithine carbamoyltran 96.9 0.014 4.8E-07 60.8 14.6 94 226-319 151-261 (301)
210 3rc1_A Sugar 3-ketoreductase; 96.9 0.0017 5.9E-08 68.7 7.9 66 228-293 26-99 (350)
211 3ezy_A Dehydrogenase; structur 96.8 0.0012 4.3E-08 69.4 6.6 64 230-293 3-74 (344)
212 3e18_A Oxidoreductase; dehydro 96.8 0.0012 4.1E-08 70.1 6.6 64 230-293 6-75 (359)
213 3g17_A Similar to 2-dehydropan 96.8 0.00017 5.7E-09 74.6 -0.2 91 230-322 3-99 (294)
214 1zpv_A ACT domain protein; str 96.8 0.0018 6.1E-08 54.7 6.3 63 559-623 6-71 (91)
215 3evn_A Oxidoreductase, GFO/IDH 96.8 0.0021 7.2E-08 67.2 8.1 64 230-293 6-77 (329)
216 3cea_A MYO-inositol 2-dehydrog 96.8 0.0026 8.8E-08 66.7 8.8 64 230-293 9-81 (346)
217 2d59_A Hypothetical protein PH 96.7 0.0022 7.5E-08 59.5 6.8 99 229-338 22-125 (144)
218 1vlv_A Otcase, ornithine carba 96.7 0.021 7.3E-07 60.0 14.9 125 174-319 133-285 (325)
219 2a9f_A Putative malic enzyme ( 96.7 0.0028 9.5E-08 68.3 8.1 96 222-322 181-292 (398)
220 1iuk_A Hypothetical protein TT 96.7 0.0018 6.2E-08 59.9 5.8 100 228-336 12-116 (140)
221 1pvv_A Otcase, ornithine carba 96.7 0.029 1E-06 58.8 15.5 94 226-319 152-271 (315)
222 1pzg_A LDH, lactate dehydrogen 96.7 0.0057 1.9E-07 64.6 10.0 67 229-295 9-92 (331)
223 3ohs_X Trans-1,2-dihydrobenzen 96.7 0.0038 1.3E-07 65.4 8.7 64 230-293 3-76 (334)
224 4a7p_A UDP-glucose dehydrogena 96.7 0.0046 1.6E-07 68.0 9.5 102 223-329 316-430 (446)
225 2v6b_A L-LDH, L-lactate dehydr 96.6 0.0017 6E-08 67.6 5.6 90 230-321 1-118 (304)
226 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0043 1.5E-07 62.0 7.8 90 224-319 26-121 (223)
227 1ldn_A L-lactate dehydrogenase 96.6 0.0014 4.7E-08 68.8 4.4 66 229-294 6-85 (316)
228 3r7f_A Aspartate carbamoyltran 96.6 0.015 5.3E-07 60.6 12.3 92 226-319 144-250 (304)
229 2f06_A Conserved hypothetical 96.6 0.0038 1.3E-07 57.5 6.9 58 559-620 73-130 (144)
230 3mz0_A Inositol 2-dehydrogenas 96.6 0.0029 1E-07 66.5 7.0 63 230-292 3-75 (344)
231 1dxh_A Ornithine carbamoyltran 96.5 0.02 6.8E-07 60.5 13.2 127 173-319 119-274 (335)
232 3c1a_A Putative oxidoreductase 96.5 0.0013 4.4E-08 68.4 4.1 63 230-293 11-79 (315)
233 3q2o_A Phosphoribosylaminoimid 96.5 0.0029 9.9E-08 67.7 6.7 65 225-289 10-81 (389)
234 1duv_G Octase-1, ornithine tra 96.5 0.016 5.4E-07 61.3 12.0 127 174-319 119-274 (333)
235 2fgc_A Acetolactate synthase, 96.5 0.0045 1.5E-07 60.3 7.2 75 558-632 29-105 (193)
236 3l9w_A Glutathione-regulated p 96.5 0.0023 7.8E-08 69.7 5.7 90 229-320 4-103 (413)
237 3ec7_A Putative dehydrogenase; 96.5 0.0042 1.4E-07 65.9 7.5 64 229-292 23-96 (357)
238 4amu_A Ornithine carbamoyltran 96.5 0.024 8.2E-07 60.5 13.3 93 227-319 178-300 (365)
239 1oth_A Protein (ornithine tran 96.5 0.029 1E-06 58.9 13.7 126 173-319 120-271 (321)
240 3t4e_A Quinate/shikimate dehyd 96.4 0.0041 1.4E-07 65.2 7.2 71 224-294 143-231 (312)
241 3gg2_A Sugar dehydrogenase, UD 96.4 0.0087 3E-07 65.8 10.1 94 224-321 313-420 (450)
242 3bio_A Oxidoreductase, GFO/IDH 96.4 0.0034 1.2E-07 65.3 6.5 98 230-335 10-115 (304)
243 1ml4_A Aspartate transcarbamoy 96.4 0.013 4.4E-07 61.3 10.8 94 226-319 152-268 (308)
244 3l4b_C TRKA K+ channel protien 96.4 0.0034 1.2E-07 61.6 6.1 65 230-294 1-76 (218)
245 1f06_A MESO-diaminopimelate D- 96.4 0.0039 1.3E-07 65.4 6.9 99 230-335 4-108 (320)
246 3e82_A Putative oxidoreductase 96.4 0.0073 2.5E-07 64.2 8.9 63 230-293 8-77 (364)
247 1jw9_B Molybdopterin biosynthe 96.4 0.0022 7.4E-08 65.0 4.3 105 208-318 12-152 (249)
248 1t2d_A LDH-P, L-lactate dehydr 96.3 0.0078 2.7E-07 63.3 8.6 62 230-292 5-81 (322)
249 4fgw_A Glycerol-3-phosphate de 96.3 0.0033 1.1E-07 67.9 5.8 89 231-321 36-153 (391)
250 2hjr_A Malate dehydrogenase; m 96.3 0.0099 3.4E-07 62.6 9.3 62 230-292 15-91 (328)
251 1ydw_A AX110P-like protein; st 96.3 0.011 3.8E-07 62.5 9.8 102 230-336 7-121 (362)
252 1yqd_A Sinapyl alcohol dehydro 96.3 0.0051 1.8E-07 65.3 7.2 88 228-320 187-283 (366)
253 4f2g_A Otcase 1, ornithine car 96.3 0.032 1.1E-06 58.3 13.0 94 226-319 151-264 (309)
254 2aef_A Calcium-gated potassium 96.3 0.0051 1.7E-07 60.9 6.5 85 229-317 9-103 (234)
255 4a8t_A Putrescine carbamoyltra 96.2 0.073 2.5E-06 56.3 15.4 129 172-319 136-292 (339)
256 3csu_A Protein (aspartate carb 96.2 0.028 9.5E-07 58.8 12.0 94 226-319 151-267 (310)
257 4fcc_A Glutamate dehydrogenase 96.2 0.028 9.7E-07 61.5 12.2 96 224-324 230-355 (450)
258 1lld_A L-lactate dehydrogenase 96.2 0.015 5.2E-07 60.2 9.6 91 229-321 7-126 (319)
259 2w37_A Ornithine carbamoyltran 96.2 0.04 1.4E-06 58.7 12.8 127 172-319 140-295 (359)
260 3pqe_A L-LDH, L-lactate dehydr 96.1 0.0087 3E-07 63.1 7.7 94 229-325 5-126 (326)
261 2dvm_A Malic enzyme, 439AA lon 96.1 0.0086 2.9E-07 65.6 7.9 94 224-320 181-297 (439)
262 2q3e_A UDP-glucose 6-dehydroge 96.1 0.018 6.2E-07 63.4 10.6 93 226-321 326-444 (467)
263 1b7g_O Protein (glyceraldehyde 96.1 0.0093 3.2E-07 63.2 7.9 84 231-319 3-108 (340)
264 1js1_X Transcarbamylase; alpha 96.1 0.095 3.3E-06 55.1 15.3 126 171-319 130-275 (324)
265 3p7m_A Malate dehydrogenase; p 96.1 0.023 8E-07 59.7 10.8 95 228-325 4-126 (321)
266 3two_A Mannitol dehydrogenase; 96.1 0.0097 3.3E-07 62.5 7.8 88 228-320 176-266 (348)
267 3m2t_A Probable dehydrogenase; 96.1 0.0059 2E-07 64.8 6.1 63 230-292 6-77 (359)
268 1npy_A Hypothetical shikimate 96.1 0.013 4.5E-07 60.1 8.5 66 228-295 118-187 (271)
269 3nep_X Malate dehydrogenase; h 96.1 0.0088 3E-07 62.7 7.3 93 230-325 1-122 (314)
270 4ep1_A Otcase, ornithine carba 96.1 0.079 2.7E-06 56.0 14.5 94 226-319 176-294 (340)
271 1j5p_A Aspartate dehydrogenase 96.1 0.0067 2.3E-07 61.7 6.1 96 228-336 11-111 (253)
272 4fb5_A Probable oxidoreductase 96.0 0.008 2.7E-07 63.5 6.9 64 229-292 25-103 (393)
273 4had_A Probable oxidoreductase 96.0 0.0076 2.6E-07 63.3 6.7 62 231-292 25-95 (350)
274 4a8p_A Putrescine carbamoyltra 96.0 0.09 3.1E-06 55.9 14.7 93 226-319 150-270 (355)
275 3vku_A L-LDH, L-lactate dehydr 96.0 0.0074 2.5E-07 63.6 6.4 97 227-325 7-129 (326)
276 3grf_A Ornithine carbamoyltran 96.0 0.08 2.7E-06 55.8 14.2 133 173-319 119-283 (328)
277 2axq_A Saccharopine dehydrogen 96.0 0.0071 2.4E-07 66.9 6.4 93 222-319 16-119 (467)
278 3tpf_A Otcase, ornithine carba 96.0 0.11 3.7E-06 54.3 14.8 94 226-319 142-262 (307)
279 3gd5_A Otcase, ornithine carba 95.9 0.095 3.2E-06 55.1 14.2 94 226-319 154-273 (323)
280 3tl2_A Malate dehydrogenase; c 95.9 0.015 5.2E-07 60.9 8.3 95 228-325 7-131 (315)
281 3qy9_A DHPR, dihydrodipicolina 95.9 0.012 3.9E-07 59.6 7.0 80 230-321 4-85 (243)
282 3fef_A Putative glucosidase LP 95.9 0.017 5.9E-07 63.5 8.7 112 228-340 4-167 (450)
283 1y6j_A L-lactate dehydrogenase 95.8 0.01 3.6E-07 62.2 6.6 110 229-341 7-147 (318)
284 2nu8_A Succinyl-COA ligase [AD 95.8 0.016 5.6E-07 59.9 8.0 102 229-336 7-114 (288)
285 3i23_A Oxidoreductase, GFO/IDH 95.8 0.012 4.2E-07 62.0 7.1 62 231-292 4-74 (349)
286 3lk7_A UDP-N-acetylmuramoylala 95.8 0.0085 2.9E-07 65.7 6.1 110 226-335 6-136 (451)
287 3d6n_B Aspartate carbamoyltran 95.8 0.056 1.9E-06 56.0 11.7 66 226-293 143-214 (291)
288 3kux_A Putative oxidoreductase 95.8 0.0087 3E-07 63.1 5.8 64 230-293 8-77 (352)
289 3aog_A Glutamate dehydrogenase 95.7 0.14 4.7E-06 56.0 15.0 95 224-324 230-345 (440)
290 1piw_A Hypothetical zinc-type 95.7 0.015 5.1E-07 61.4 7.3 89 228-320 179-277 (360)
291 1xyg_A Putative N-acetyl-gamma 95.7 0.019 6.5E-07 61.3 8.1 85 229-320 16-113 (359)
292 2p2s_A Putative oxidoreductase 95.7 0.023 7.8E-07 59.4 8.6 63 230-292 5-75 (336)
293 1h6d_A Precursor form of gluco 95.7 0.0081 2.8E-07 65.6 5.3 64 230-293 84-160 (433)
294 3g79_A NDP-N-acetyl-D-galactos 95.7 0.017 5.8E-07 64.0 7.7 98 224-329 348-458 (478)
295 3sds_A Ornithine carbamoyltran 95.7 0.13 4.5E-06 54.6 14.2 96 224-319 183-308 (353)
296 1oju_A MDH, malate dehydrogena 95.7 0.029 9.9E-07 58.2 9.0 93 230-326 1-123 (294)
297 2cdc_A Glucose dehydrogenase g 95.6 0.0075 2.6E-07 63.9 4.6 91 226-320 178-279 (366)
298 2y0c_A BCEC, UDP-glucose dehyd 95.6 0.033 1.1E-06 61.6 9.9 101 224-329 323-447 (478)
299 3fhl_A Putative oxidoreductase 95.6 0.01 3.6E-07 62.8 5.6 62 230-292 6-74 (362)
300 3ldh_A Lactate dehydrogenase; 95.6 0.011 3.9E-07 62.3 5.8 90 228-319 20-138 (330)
301 3gvi_A Malate dehydrogenase; N 95.6 0.031 1.1E-06 58.8 9.1 91 227-319 5-124 (324)
302 3ojo_A CAP5O; rossmann fold, c 95.6 0.032 1.1E-06 61.0 9.4 84 226-318 312-406 (431)
303 3orq_A N5-carboxyaminoimidazol 95.6 0.014 4.7E-07 62.4 6.4 64 225-289 8-79 (377)
304 3moi_A Probable dehydrogenase; 95.6 0.01 3.5E-07 63.6 5.3 63 230-292 3-73 (387)
305 3o9z_A Lipopolysaccaride biosy 95.6 0.022 7.7E-07 59.2 7.8 63 230-292 4-81 (312)
306 4gqa_A NAD binding oxidoreduct 95.5 0.01 3.5E-07 63.9 5.3 62 231-292 28-105 (412)
307 1ur5_A Malate dehydrogenase; o 95.5 0.026 8.9E-07 58.8 8.1 62 230-292 3-79 (309)
308 3d0o_A L-LDH 1, L-lactate dehy 95.5 0.016 5.5E-07 60.6 6.6 110 229-341 6-147 (317)
309 2tmg_A Protein (glutamate dehy 95.5 0.26 8.9E-06 53.5 16.2 96 223-324 203-320 (415)
310 1cdo_A Alcohol dehydrogenase; 95.5 0.04 1.4E-06 58.4 9.5 87 228-319 192-294 (374)
311 2vt3_A REX, redox-sensing tran 95.5 0.009 3.1E-07 59.3 4.1 64 230-293 86-155 (215)
312 3oa2_A WBPB; oxidoreductase, s 95.5 0.024 8.3E-07 59.1 7.7 63 230-292 4-82 (318)
313 3tum_A Shikimate dehydrogenase 95.5 0.039 1.3E-06 56.5 9.0 96 224-319 120-225 (269)
314 2i6t_A Ubiquitin-conjugating e 95.4 0.016 5.6E-07 60.3 6.1 62 230-292 15-86 (303)
315 1uuf_A YAHK, zinc-type alcohol 95.4 0.018 6.3E-07 61.2 6.6 88 228-320 194-289 (369)
316 1ez4_A Lactate dehydrogenase; 95.4 0.013 4.4E-07 61.5 5.3 109 230-341 6-145 (318)
317 3e8x_A Putative NAD-dependent 95.4 0.028 9.6E-07 55.1 7.5 71 224-294 16-95 (236)
318 3gdo_A Uncharacterized oxidore 95.4 0.018 6E-07 61.0 6.4 63 230-293 6-75 (358)
319 3k92_A NAD-GDH, NAD-specific g 95.4 0.12 4.1E-06 56.2 12.9 107 224-338 216-342 (424)
320 2czc_A Glyceraldehyde-3-phosph 95.4 0.022 7.5E-07 60.1 7.0 64 231-294 4-90 (334)
321 2jhf_A Alcohol dehydrogenase E 95.4 0.043 1.5E-06 58.1 9.3 87 228-319 191-293 (374)
322 2o3j_A UDP-glucose 6-dehydroge 95.3 0.056 1.9E-06 59.8 10.5 102 224-329 330-455 (481)
323 3lou_A Formyltetrahydrofolate 95.3 0.021 7.1E-07 59.3 6.5 54 556-609 8-61 (292)
324 3eag_A UDP-N-acetylmuramate:L- 95.3 0.03 1E-06 58.7 7.6 62 229-290 4-73 (326)
325 2zqz_A L-LDH, L-lactate dehydr 95.3 0.017 5.9E-07 60.8 5.8 110 229-341 9-149 (326)
326 1p0f_A NADP-dependent alcohol 95.2 0.042 1.4E-06 58.2 8.7 87 228-319 191-293 (373)
327 3dty_A Oxidoreductase, GFO/IDH 95.2 0.015 5.2E-07 62.5 5.3 63 230-292 13-94 (398)
328 1e3i_A Alcohol dehydrogenase, 95.2 0.051 1.7E-06 57.6 9.3 87 228-319 195-297 (376)
329 3ew7_A LMO0794 protein; Q8Y8U8 95.2 0.052 1.8E-06 52.0 8.6 66 230-295 1-73 (221)
330 1rjw_A ADH-HT, alcohol dehydro 95.2 0.021 7E-07 59.9 6.1 88 228-320 164-262 (339)
331 3f4l_A Putative oxidoreductase 95.2 0.016 5.4E-07 61.0 5.1 63 230-292 3-74 (345)
332 2fzw_A Alcohol dehydrogenase c 95.2 0.044 1.5E-06 58.0 8.6 87 228-319 190-292 (373)
333 1zh8_A Oxidoreductase; TM0312, 95.1 0.023 8E-07 59.6 6.3 63 230-292 19-91 (340)
334 3obi_A Formyltetrahydrofolate 95.1 0.014 4.8E-07 60.5 4.5 53 556-608 4-56 (288)
335 4ekn_B Aspartate carbamoyltran 95.1 0.16 5.6E-06 52.9 12.5 65 226-290 148-225 (306)
336 4h3v_A Oxidoreductase domain p 95.1 0.014 4.7E-07 61.6 4.5 63 230-292 7-84 (390)
337 2d8a_A PH0655, probable L-thre 95.1 0.016 5.4E-07 60.9 4.8 45 228-272 167-213 (348)
338 2ozp_A N-acetyl-gamma-glutamyl 95.1 0.028 9.4E-07 59.7 6.6 85 230-320 5-100 (345)
339 1ys4_A Aspartate-semialdehyde 95.0 0.021 7.3E-07 60.6 5.7 85 230-319 9-114 (354)
340 4h31_A Otcase, ornithine carba 95.0 0.27 9.4E-06 52.3 14.1 130 171-319 142-300 (358)
341 1cf2_P Protein (glyceraldehyde 95.0 0.02 6.7E-07 60.6 5.2 64 231-294 3-89 (337)
342 1pl8_A Human sorbitol dehydrog 95.0 0.045 1.6E-06 57.6 8.0 88 228-320 171-274 (356)
343 1oi7_A Succinyl-COA synthetase 94.9 0.027 9.2E-07 58.3 5.9 101 229-336 7-114 (288)
344 2nqt_A N-acetyl-gamma-glutamyl 94.9 0.028 9.4E-07 59.9 6.1 86 230-322 10-113 (352)
345 1zq6_A Otcase, ornithine carba 94.9 0.52 1.8E-05 50.1 15.9 128 170-319 151-315 (359)
346 2yfk_A Aspartate/ornithine car 94.9 0.12 4E-06 56.2 11.1 64 227-290 186-270 (418)
347 3v5n_A Oxidoreductase; structu 94.9 0.024 8.3E-07 61.4 5.7 64 230-293 38-120 (417)
348 1zud_1 Adenylyltransferase THI 94.9 0.017 5.7E-07 58.5 4.1 97 208-307 9-141 (251)
349 4ew6_A D-galactose-1-dehydroge 94.9 0.033 1.1E-06 58.4 6.6 59 229-292 25-90 (330)
350 3abi_A Putative uncharacterize 94.9 0.03 1E-06 59.5 6.2 68 226-294 13-88 (365)
351 3n0v_A Formyltetrahydrofolate 94.8 0.044 1.5E-06 56.7 7.2 53 557-609 7-59 (286)
352 3s2e_A Zinc-containing alcohol 94.8 0.025 8.4E-07 59.2 5.5 87 228-319 166-263 (340)
353 3u3x_A Oxidoreductase; structu 94.8 0.034 1.2E-06 59.0 6.6 64 229-292 26-97 (361)
354 2dt5_A AT-rich DNA-binding pro 94.8 0.014 4.8E-07 57.7 3.3 63 230-293 81-150 (211)
355 4gmf_A Yersiniabactin biosynth 94.8 0.02 6.7E-07 61.5 4.6 64 229-293 7-76 (372)
356 1pjq_A CYSG, siroheme synthase 94.8 0.028 9.5E-07 61.9 5.9 91 224-319 7-103 (457)
357 2yfq_A Padgh, NAD-GDH, NAD-spe 94.8 0.064 2.2E-06 58.4 8.7 95 224-324 207-327 (421)
358 2nvw_A Galactose/lactose metab 94.8 0.03 1E-06 62.0 6.2 63 230-292 40-117 (479)
359 1ff9_A Saccharopine reductase; 94.8 0.023 7.9E-07 62.4 5.3 67 228-294 2-79 (450)
360 2cf5_A Atccad5, CAD, cinnamyl 94.8 0.031 1E-06 59.0 6.1 88 228-320 180-276 (357)
361 1lc0_A Biliverdin reductase A; 94.8 0.021 7.2E-07 58.9 4.7 61 230-293 8-75 (294)
362 3ip1_A Alcohol dehydrogenase, 94.8 0.049 1.7E-06 58.5 7.8 88 228-319 213-318 (404)
363 3rui_A Ubiquitin-like modifier 94.8 0.058 2E-06 57.1 8.0 60 188-260 5-66 (340)
364 3o1l_A Formyltetrahydrofolate 94.8 0.02 6.8E-07 59.7 4.4 51 559-609 23-73 (302)
365 3vtf_A UDP-glucose 6-dehydroge 94.8 0.069 2.4E-06 58.5 8.9 85 225-318 329-426 (444)
366 4aj2_A L-lactate dehydrogenase 94.7 0.038 1.3E-06 58.3 6.5 97 226-325 16-140 (331)
367 1v9l_A Glutamate dehydrogenase 94.7 0.24 8.2E-06 53.9 12.9 34 224-257 205-238 (421)
368 2ixa_A Alpha-N-acetylgalactosa 94.7 0.043 1.5E-06 59.8 7.2 63 230-292 21-100 (444)
369 1mld_A Malate dehydrogenase; o 94.7 0.08 2.7E-06 55.3 8.8 94 230-326 1-122 (314)
370 3btv_A Galactose/lactose metab 94.7 0.022 7.5E-07 62.2 4.6 63 230-292 21-98 (438)
371 4ej6_A Putative zinc-binding d 94.7 0.035 1.2E-06 59.0 6.1 87 228-319 182-284 (370)
372 3q98_A Transcarbamylase; rossm 94.6 0.38 1.3E-05 51.9 14.2 66 226-291 188-274 (399)
373 1kyq_A Met8P, siroheme biosynt 94.6 0.011 3.8E-07 60.9 2.0 39 224-262 8-46 (274)
374 3uko_A Alcohol dehydrogenase c 94.6 0.056 1.9E-06 57.4 7.5 87 228-319 193-295 (378)
375 3do5_A HOM, homoserine dehydro 94.5 0.1 3.5E-06 54.9 9.3 106 231-337 4-134 (327)
376 1hdo_A Biliverdin IX beta redu 94.5 0.063 2.1E-06 50.7 7.0 66 229-294 3-78 (206)
377 1e3j_A NADP(H)-dependent ketos 94.5 0.059 2E-06 56.6 7.4 88 228-320 168-272 (352)
378 1iz0_A Quinone oxidoreductase; 94.5 0.036 1.2E-06 56.9 5.5 85 228-319 125-218 (302)
379 2nyi_A Unknown protein; protei 94.5 0.03 1E-06 54.4 4.6 63 557-619 92-160 (195)
380 3fpc_A NADP-dependent alcohol 94.4 0.038 1.3E-06 58.1 5.8 87 228-319 166-266 (352)
381 1pqw_A Polyketide synthase; ro 94.4 0.025 8.7E-07 54.1 4.0 35 228-262 38-73 (198)
382 2fp4_A Succinyl-COA ligase [GD 94.4 0.042 1.4E-06 57.3 5.9 106 225-336 9-121 (305)
383 3nrb_A Formyltetrahydrofolate 94.4 0.048 1.6E-06 56.4 6.1 51 559-609 8-58 (287)
384 3cps_A Glyceraldehyde 3-phosph 94.3 0.077 2.6E-06 56.5 7.9 85 231-320 19-139 (354)
385 3ius_A Uncharacterized conserv 94.3 0.04 1.4E-06 55.3 5.4 66 229-294 5-74 (286)
386 1obb_A Maltase, alpha-glucosid 94.3 0.069 2.4E-06 59.1 7.7 113 229-342 3-174 (480)
387 4e4t_A Phosphoribosylaminoimid 94.3 0.062 2.1E-06 58.3 7.2 63 226-288 32-101 (419)
388 3uog_A Alcohol dehydrogenase; 94.3 0.053 1.8E-06 57.3 6.5 45 228-272 189-234 (363)
389 1nvm_B Acetaldehyde dehydrogen 94.2 0.061 2.1E-06 56.2 6.7 87 230-319 5-104 (312)
390 1u8s_A Glycine cleavage system 94.2 0.044 1.5E-06 52.8 5.3 48 559-608 7-54 (192)
391 3qvo_A NMRA family protein; st 94.2 0.031 1.1E-06 55.0 4.2 67 227-293 21-98 (236)
392 2bma_A Glutamate dehydrogenase 94.2 0.2 6.8E-06 55.1 10.9 34 224-257 247-280 (470)
393 2h6e_A ADH-4, D-arabinose 1-de 94.2 0.04 1.4E-06 57.7 5.2 87 228-319 170-269 (344)
394 1u8f_O GAPDH, glyceraldehyde-3 94.2 0.047 1.6E-06 57.7 5.7 87 230-321 4-124 (335)
395 3keo_A Redox-sensing transcrip 94.1 0.024 8.1E-07 56.2 3.2 66 229-294 84-159 (212)
396 4eye_A Probable oxidoreductase 94.1 0.054 1.8E-06 56.7 6.2 86 228-319 159-257 (342)
397 1f8f_A Benzyl alcohol dehydrog 94.1 0.036 1.2E-06 58.7 4.7 45 228-272 190-236 (371)
398 2hcy_A Alcohol dehydrogenase 1 94.1 0.049 1.7E-06 57.1 5.8 88 228-320 169-270 (347)
399 3h2s_A Putative NADH-flavin re 94.1 0.091 3.1E-06 50.6 7.2 64 230-293 1-72 (224)
400 1lnq_A MTHK channels, potassiu 94.0 0.048 1.7E-06 56.9 5.5 86 229-317 115-209 (336)
401 1bgv_A Glutamate dehydrogenase 94.0 0.24 8.2E-06 54.3 11.1 34 224-257 225-258 (449)
402 2d4a_B Malate dehydrogenase; a 94.0 0.073 2.5E-06 55.4 6.8 91 231-325 1-120 (308)
403 3aoe_E Glutamate dehydrogenase 94.0 0.48 1.6E-05 51.5 13.3 95 224-324 213-324 (419)
404 2xxj_A L-LDH, L-lactate dehydr 94.0 0.053 1.8E-06 56.6 5.6 93 230-325 1-120 (310)
405 1lu9_A Methylene tetrahydromet 93.9 0.095 3.3E-06 53.5 7.4 38 225-262 115-153 (287)
406 3e5r_O PP38, glyceraldehyde-3- 93.8 0.077 2.6E-06 56.1 6.6 85 231-320 5-127 (337)
407 1vkn_A N-acetyl-gamma-glutamyl 93.8 0.12 3.9E-06 55.1 7.9 85 229-320 13-108 (351)
408 4dup_A Quinone oxidoreductase; 93.7 0.054 1.8E-06 57.0 5.2 86 228-319 167-265 (353)
409 2we8_A Xanthine dehydrogenase; 93.7 0.18 6.2E-06 54.2 9.3 139 229-396 204-362 (386)
410 2yyy_A Glyceraldehyde-3-phosph 93.7 0.11 3.9E-06 54.9 7.7 83 231-319 4-113 (343)
411 3tqh_A Quinone oxidoreductase; 93.7 0.033 1.1E-06 57.8 3.4 87 228-320 152-246 (321)
412 3fi9_A Malate dehydrogenase; s 93.7 0.058 2E-06 57.2 5.3 66 227-292 6-85 (343)
413 3upl_A Oxidoreductase; rossman 93.7 0.096 3.3E-06 57.4 7.2 64 230-293 24-117 (446)
414 3r3j_A Glutamate dehydrogenase 93.7 0.19 6.6E-06 55.0 9.5 36 224-259 234-270 (456)
415 3h9e_O Glyceraldehyde-3-phosph 93.7 0.074 2.5E-06 56.3 6.0 36 230-265 8-44 (346)
416 3r6d_A NAD-dependent epimerase 93.6 0.038 1.3E-06 53.5 3.5 63 230-292 6-82 (221)
417 3oqb_A Oxidoreductase; structu 93.6 0.16 5.4E-06 53.9 8.5 100 230-335 7-132 (383)
418 3gms_A Putative NADPH:quinone 93.6 0.061 2.1E-06 56.2 5.2 46 228-273 144-191 (340)
419 2vn8_A Reticulon-4-interacting 93.5 0.17 5.9E-06 53.5 8.8 90 228-321 183-282 (375)
420 3fbg_A Putative arginate lyase 93.5 0.062 2.1E-06 56.3 5.1 45 228-272 150-196 (346)
421 4hv4_A UDP-N-acetylmuramate--L 93.5 0.081 2.8E-06 58.7 6.2 107 229-335 22-146 (494)
422 4gsl_A Ubiquitin-like modifier 93.5 0.11 3.8E-06 58.9 7.4 74 175-261 283-359 (615)
423 3ip3_A Oxidoreductase, putativ 93.4 0.071 2.4E-06 55.7 5.5 62 230-292 3-76 (337)
424 3qwb_A Probable quinone oxidor 93.4 0.064 2.2E-06 55.8 5.0 45 228-272 148-194 (334)
425 1vj0_A Alcohol dehydrogenase, 93.4 0.096 3.3E-06 55.7 6.5 46 228-273 195-242 (380)
426 3goh_A Alcohol dehydrogenase, 93.4 0.064 2.2E-06 55.3 5.0 86 228-319 142-229 (315)
427 2ejw_A HDH, homoserine dehydro 93.3 0.033 1.1E-06 58.8 2.7 101 231-336 5-116 (332)
428 1kol_A Formaldehyde dehydrogen 93.3 0.095 3.3E-06 55.9 6.4 46 228-273 185-232 (398)
429 2c0c_A Zinc binding alcohol de 93.3 0.051 1.7E-06 57.5 4.1 45 228-272 163-209 (362)
430 4f3y_A DHPR, dihydrodipicolina 93.3 0.062 2.1E-06 55.1 4.6 63 230-292 8-82 (272)
431 1v3u_A Leukotriene B4 12- hydr 93.2 0.068 2.3E-06 55.5 4.9 45 228-272 145-191 (333)
432 4b7c_A Probable oxidoreductase 93.2 0.053 1.8E-06 56.4 4.0 45 228-272 149-196 (336)
433 3jyn_A Quinone oxidoreductase; 93.2 0.062 2.1E-06 55.7 4.5 45 228-272 140-186 (325)
434 2dq4_A L-threonine 3-dehydroge 93.1 0.056 1.9E-06 56.5 4.0 35 228-262 164-199 (343)
435 3vh1_A Ubiquitin-like modifier 93.0 0.15 5E-06 57.8 7.5 91 225-319 323-464 (598)
436 2ep5_A 350AA long hypothetical 93.0 0.074 2.5E-06 56.4 4.7 84 230-319 5-108 (350)
437 3dhn_A NAD-dependent epimerase 92.9 0.14 4.9E-06 49.4 6.3 64 230-293 5-77 (227)
438 3ijp_A DHPR, dihydrodipicolina 92.8 0.11 3.7E-06 53.8 5.6 63 230-292 22-97 (288)
439 1mv8_A GMD, GDP-mannose 6-dehy 92.8 0.15 5E-06 55.5 7.0 85 228-318 312-419 (436)
440 1xgk_A Nitrogen metabolite rep 92.8 0.12 4.2E-06 54.3 6.1 95 228-322 4-115 (352)
441 2b5w_A Glucose dehydrogenase; 92.7 0.1 3.4E-06 55.0 5.4 46 228-273 172-224 (357)
442 1hdg_O Holo-D-glyceraldehyde-3 92.7 0.095 3.3E-06 55.3 5.1 86 230-320 1-123 (332)
443 3hhp_A Malate dehydrogenase; M 92.7 0.23 7.9E-06 51.8 8.0 96 230-328 1-125 (312)
444 3oig_A Enoyl-[acyl-carrier-pro 92.7 0.43 1.5E-05 47.5 9.8 38 225-262 3-43 (266)
445 3hn7_A UDP-N-acetylmuramate-L- 92.7 0.16 5.5E-06 56.7 7.2 109 227-335 17-146 (524)
446 2f06_A Conserved hypothetical 92.6 0.19 6.7E-06 45.8 6.5 59 559-621 7-65 (144)
447 2x5o_A UDP-N-acetylmuramoylala 92.5 0.11 3.8E-06 56.5 5.5 109 226-335 2-128 (439)
448 2nyi_A Unknown protein; protei 92.5 0.21 7.1E-06 48.4 6.9 47 559-607 6-52 (195)
449 3kzn_A Aotcase, N-acetylornith 92.5 2.3 7.7E-05 45.2 15.4 102 170-291 151-273 (359)
450 2eih_A Alcohol dehydrogenase; 92.5 0.13 4.5E-06 53.7 5.8 45 228-272 166-212 (343)
451 3dr3_A N-acetyl-gamma-glutamyl 92.4 0.091 3.1E-06 55.6 4.5 85 230-320 5-107 (337)
452 1u8s_A Glycine cleavage system 92.4 0.29 1E-05 46.9 7.8 63 558-620 93-164 (192)
453 3gqv_A Enoyl reductase; medium 92.4 0.3 1E-05 51.7 8.5 88 227-319 163-263 (371)
454 2dph_A Formaldehyde dismutase; 92.4 0.1 3.4E-06 55.9 4.9 91 228-319 185-299 (398)
455 3mw9_A GDH 1, glutamate dehydr 92.3 0.78 2.7E-05 50.7 11.9 90 226-322 241-351 (501)
456 2j3h_A NADP-dependent oxidored 92.3 0.071 2.4E-06 55.6 3.5 35 228-262 155-190 (345)
457 1o6z_A MDH, malate dehydrogena 92.2 0.27 9.2E-06 50.9 7.7 109 230-341 1-143 (303)
458 2x0j_A Malate dehydrogenase; o 92.1 0.23 7.8E-06 51.5 7.1 96 230-327 1-124 (294)
459 4a0s_A Octenoyl-COA reductase/ 92.1 0.18 6E-06 54.8 6.5 87 228-320 220-337 (447)
460 1qor_A Quinone oxidoreductase; 92.1 0.11 3.7E-06 53.8 4.5 45 228-272 140-186 (327)
461 3pi7_A NADH oxidoreductase; gr 92.1 0.22 7.5E-06 52.1 6.9 85 229-319 165-263 (349)
462 4ina_A Saccharopine dehydrogen 92.0 0.088 3E-06 56.8 3.9 86 230-320 2-108 (405)
463 3ff4_A Uncharacterized protein 91.9 0.11 3.9E-06 46.7 3.9 97 230-338 5-106 (122)
464 1u8x_X Maltose-6'-phosphate gl 91.8 0.25 8.4E-06 54.6 7.3 65 229-293 28-112 (472)
465 2rir_A Dipicolinate synthase, 91.8 0.23 8E-06 51.0 6.7 105 227-338 5-120 (300)
466 1smk_A Malate dehydrogenase, g 91.8 0.11 3.8E-06 54.4 4.3 64 230-293 9-86 (326)
467 2bka_A CC3, TAT-interacting pr 91.8 0.16 5.3E-06 49.6 5.1 67 227-293 16-94 (242)
468 2j8z_A Quinone oxidoreductase; 91.8 0.15 5.1E-06 53.6 5.2 44 228-271 162-207 (354)
469 3c8m_A Homoserine dehydrogenas 91.8 0.15 5.1E-06 53.7 5.2 105 230-335 7-138 (331)
470 3nv9_A Malic enzyme; rossmann 91.7 1.1 3.6E-05 49.2 11.9 122 176-321 187-329 (487)
471 1xq6_A Unknown protein; struct 91.7 0.24 8.1E-06 48.2 6.4 67 227-293 2-79 (253)
472 3mtj_A Homoserine dehydrogenas 91.7 0.18 6E-06 55.4 5.9 62 231-292 12-87 (444)
473 3on5_A BH1974 protein; structu 91.7 0.27 9.4E-06 52.4 7.2 134 229-395 199-344 (362)
474 3cmc_O GAPDH, glyceraldehyde-3 91.7 0.17 6E-06 53.3 5.7 29 231-259 3-32 (334)
475 3nkl_A UDP-D-quinovosamine 4-d 91.7 0.17 5.7E-06 45.6 4.8 66 229-294 4-76 (141)
476 4dvj_A Putative zinc-dependent 91.6 0.25 8.4E-06 52.2 6.7 45 228-272 171-218 (363)
477 4id9_A Short-chain dehydrogena 91.6 0.19 6.7E-06 51.8 5.8 66 224-294 14-88 (347)
478 3jv7_A ADH-A; dehydrogenase, n 91.5 0.15 5.1E-06 53.2 5.0 46 228-273 171-218 (345)
479 2yv1_A Succinyl-COA ligase [AD 91.5 0.11 3.9E-06 53.7 3.9 100 231-336 15-120 (294)
480 1qyc_A Phenylcoumaran benzylic 91.4 0.26 9E-06 49.7 6.5 64 229-292 4-86 (308)
481 1gad_O D-glyceraldehyde-3-phos 91.4 0.2 6.8E-06 52.8 5.7 30 231-260 3-33 (330)
482 3gpi_A NAD-dependent epimerase 91.4 0.12 4.1E-06 52.0 3.8 62 228-292 2-72 (286)
483 2wm3_A NMRA-like family domain 91.4 0.3 1E-05 49.3 6.9 64 229-292 5-81 (299)
484 3ing_A Homoserine dehydrogenas 91.3 0.24 8.4E-06 52.0 6.3 105 230-335 5-134 (325)
485 1wly_A CAAR, 2-haloacrylate re 91.3 0.18 6.1E-06 52.3 5.2 44 228-271 145-190 (333)
486 1b8p_A Protein (malate dehydro 91.1 0.37 1.3E-05 50.4 7.4 64 230-293 6-93 (329)
487 1jvb_A NAD(H)-dependent alcoho 91.1 0.12 4.2E-06 54.0 3.7 45 228-272 170-217 (347)
488 2ph5_A Homospermidine synthase 91.1 0.21 7E-06 55.2 5.6 36 226-262 11-50 (480)
489 1dlj_A UDP-glucose dehydrogena 90.9 0.36 1.2E-05 52.0 7.3 66 226-292 306-382 (402)
490 2gas_A Isoflavone reductase; N 90.9 0.23 8E-06 50.1 5.6 65 229-293 2-86 (307)
491 3pid_A UDP-glucose 6-dehydroge 90.9 0.19 6.4E-06 54.9 5.0 64 227-292 330-404 (432)
492 3m6i_A L-arabinitol 4-dehydrog 90.8 0.36 1.2E-05 50.6 7.1 87 228-319 179-283 (363)
493 3k5i_A Phosphoribosyl-aminoimi 90.7 0.35 1.2E-05 52.0 6.9 67 222-289 17-92 (403)
494 2r6j_A Eugenol synthase 1; phe 90.7 0.34 1.2E-05 49.4 6.6 64 229-292 11-88 (318)
495 2zcu_A Uncharacterized oxidore 90.7 0.16 5.4E-06 50.8 3.9 62 231-292 1-74 (286)
496 3b1j_A Glyceraldehyde 3-phosph 90.7 0.23 7.7E-06 52.6 5.3 28 231-258 4-34 (339)
497 3ruf_A WBGU; rossmann fold, UD 90.7 0.39 1.3E-05 49.5 7.1 67 226-292 22-109 (351)
498 1p3d_A UDP-N-acetylmuramate--a 90.6 0.23 8E-06 54.5 5.6 61 229-290 18-84 (475)
499 1yb5_A Quinone oxidoreductase; 90.6 0.2 6.8E-06 52.7 4.8 45 228-272 170-216 (351)
500 4g65_A TRK system potassium up 90.6 0.28 9.4E-06 54.0 6.1 65 229-293 3-78 (461)
No 1
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=3.6e-100 Score=860.64 Aligned_cols=526 Identities=35% Similarity=0.534 Sum_probs=496.9
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006212 88 TPKPTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (656)
Q Consensus 88 ~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~i 167 (656)
|.++|||+++++.+..++.|++..++++....+++++.+.++++|++++++.+++++++++++ |+||||+++|+|+|||
T Consensus 2 m~~~~vl~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 80 (529)
T 1ygy_A 2 VSLPVVLIADKLAPSTVAALGDQVEVRWVDGPDRDKLLAAVPEADALLVRSATTVDAEVLAAA-PKLKIVARAGVGLDNV 80 (529)
T ss_dssp -CCCEEEECSSCCGGGGTTSCSSSEEEECCTTSHHHHHHHGGGCSEEEECSSSCBCHHHHHTC-TTCCEEEESSSCCTTB
T ss_pred CCCcEEEEeCCCCHHHHHHHhcCceEEEcCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCcEEEECCcCcCcc
Confidence 457899999999999888887767777766678899999999999999998889999999987 5999999999999999
Q ss_pred chhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHH
Q 006212 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARR 247 (656)
Q Consensus 168 D~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~ 247 (656)
|+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+|+|+||||||+|+||+++|++
T Consensus 81 d~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIIG~G~IG~~vA~~ 160 (529)
T 1ygy_A 81 DVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQR 160 (529)
T ss_dssp CHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHH
T ss_pred CHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCCEEEEEeeCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987778999999999999999999999999
Q ss_pred HhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHH
Q 006212 248 AKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEE 327 (656)
Q Consensus 248 lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~ 327 (656)
++++||+|++|||+...+.+.+.|+..+++++++++||+|++|+|.+++|+++++++.++.||+|++|||++||+++|++
T Consensus 161 l~~~G~~V~~~d~~~~~~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~ 240 (529)
T 1ygy_A 161 IAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEA 240 (529)
T ss_dssp HHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHH
T ss_pred HHhCCCEEEEECCCCChhHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHH
Confidence 99999999999998876667788988889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCC
Q 006212 328 ALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINAPMVP 407 (656)
Q Consensus 328 aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn~p~~~ 407 (656)
+|+++|++|+++||++|||+.||+ +++|||+++|||+|||++++|.|++++++..+++++.+++.|..+.+.||.+.
T Consensus 241 aL~~al~~g~i~ga~lDv~~~eP~-~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~~~~~v~~~~-- 317 (529)
T 1ygy_A 241 ALADAITGGHVRAAGLDVFATEPC-TDSPLFELAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGEFVPDAVNVGG-- 317 (529)
T ss_dssp HHHHHHHTSSEEEEEESSCSSSSC-SCCGGGGCTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCCCTTBCSCCS--
T ss_pred HHHHHHHcCCccEEEEeeccCCCC-CCchHHhCCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCCCCCcccCCcc--
Confidence 999999999999999999999997 68999999999999999999999999999999999999999999999998765
Q ss_pred hhhhhhccchHHHHHHHhHHHHHhhcCCCCceEEEEEEeecCCCCCcccccccHHHHHHhhhhhhhccccccchHhHhhc
Q 006212 408 SEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADFTAKQ 487 (656)
Q Consensus 408 ~~~~~~l~p~~~laerlG~l~~qL~~g~~~~k~i~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vNA~~iAke 487 (656)
++.++.++||+.+++++|+++.||++| +|++++++|+|+++ + .+++++|+++++|+|+.+.++.+|++||+.+|++
T Consensus 318 ~~~hd~i~P~l~La~~lg~~~~qla~g--~~~ditria~G~~~-~-~~i~~~n~a~l~g~L~~~~~~~~~~vnA~~iA~e 393 (529)
T 1ygy_A 318 GVVNEEVAPWLDLVRKLGVLAGVLSDE--LPVSLSVQVRGELA-A-EEVEVLRLSALRGLFSAVIEDAVTFVNAPALAAE 393 (529)
T ss_dssp TTSCTTTTTHHHHHHHHHHHHHHTSSS--CCSEEEEEEEEGGG-G-SCCHHHHHHHHHHHTGGGSCTTCCCCCHHHHHHH
T ss_pred cccchhhhhHHHHHHHHHHHHHHHhCC--CceEEEEEEEeecc-c-cCCcHHHHHHHHHhcCCCCCCCccccCHHHHHHH
Confidence 788899999999999999999999999 99999999999998 7 7899999999999999999888999999999999
Q ss_pred cCceEEEEEeecCCCCCCCCceEEEEEEecccccceecCCCcEEEEEEEEECC--eeEEEEEcceeEEeecCccEEEEEe
Q 006212 488 KGLRISEERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGEISIEGKVKFG--IPHLTRVGSFGVDASLEGNLILCRQ 565 (656)
Q Consensus 488 ~GI~v~~~~~~~~~~~~~~~ntv~i~l~~~~~~~~~~~~~~~~~~v~Gt~~gG--~~rI~~IdGf~V~~~g~~~~Llv~~ 565 (656)
+||++.|.+.+.+. .|+|++++++++ .++++++|.|+|+|| .++|++||||++++.|++|+|++.|
T Consensus 394 ~Gi~i~~~~~~~~~---~~~n~v~v~~~~---------~~~~~~~v~Gt~~gg~g~~~i~~i~g~~v~~~~~~~~l~v~~ 461 (529)
T 1ygy_A 394 RGVTAEICKASESP---NHRSVVDVRAVG---------ADGSVVTVSGTLYGPQLSQKIVQINGRHFDLRAQGINLIIHY 461 (529)
T ss_dssp HSCEEEEEEESCCS---SSSEEEEEEEEC---------TTSCEEEEEEEEETTTTEEEEEEETTEEEEEESCSEEEEEEE
T ss_pred cCCEEEEEEccCCC---CCCCEEEEEEEE---------CCCCEEEEEEEEeCCCCcEEEEEECCEEEEecCCccEEEEEc
Confidence 99999998766443 799999999972 377899999999974 9999999999999999999999999
Q ss_pred cCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCCCCHHHHHHHhcCCCccEEEEEeec
Q 006212 566 VDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEEPNQDSLKEIGKVPAIEEYTLLHVS 633 (656)
Q Consensus 566 ~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~~~~e~l~~L~~~~~V~~v~~v~l~ 633 (656)
+|+||+|++|+++|++++|||++|+++|.+++++|+|+|++|++++++++++|+++|+|.++++++|+
T Consensus 462 ~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~~~~~l~~l~~~~~i~~v~~v~~~ 529 (529)
T 1ygy_A 462 VDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAAAVDAYKLEVVDLS 529 (529)
T ss_dssp SCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCCCHHHHHHHhcCCCccEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999863
No 2
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=9.9e-77 Score=647.91 Aligned_cols=391 Identities=31% Similarity=0.444 Sum_probs=347.6
Q ss_pred CCCeEEEeCCCCHhHHHHhhcC-C-cEEEec-CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006212 89 PKPTILVSEKLGEAGLAILRSF-G-NVECLY-DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (656)
Q Consensus 89 ~~~~ilv~~~l~~~~~~~l~~~-~-~v~~~~-~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD 165 (656)
.|+|||+++++++.+++.|++. . ++.+.. ..+++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+|
T Consensus 3 ~~~kil~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~l~~~~~~~d~l~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d 81 (404)
T 1sc6_A 3 DKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDDEQLKESIRDAHFIGLRSRTHLTEDVINAA-EKLVAIGAFAIGTN 81 (404)
T ss_dssp SSCCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHTTSCSEEEECSSCCBCHHHHHHC-SSCCEEEECSSCCT
T ss_pred CceEEEEeCCCCHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCcEEEECCcccC
Confidence 3568999999999999999875 3 676643 568999999999999999999889999999998 59999999999999
Q ss_pred ccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHH
Q 006212 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVA 245 (656)
Q Consensus 166 ~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA 245 (656)
|||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.|.+|+|||+||||+|+||+.+|
T Consensus 82 ~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiIGlG~IG~~vA 161 (404)
T 1sc6_A 82 QVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLG 161 (404)
T ss_dssp TBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHH
T ss_pred ccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEEeECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998766778999999999999999999999
Q ss_pred HHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 246 RRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 246 ~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
+++++|||+|++|||+.... ..++..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++
T Consensus 162 ~~l~~~G~~V~~~d~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~v 238 (404)
T 1sc6_A 162 ILAESLGMYVYFYDIENKLP---LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVV 238 (404)
T ss_dssp HHHHHTTCEEEEECSSCCCC---CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSB
T ss_pred HHHHHCCCEEEEEcCCchhc---cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHH
Confidence 99999999999999975321 1135554 8999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhHhcCCeEEEEeeccCCCCCCC----CCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcc
Q 006212 325 DEEALVRALDSGVVAQAALDVFTEEPPAK----DSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATA 400 (656)
Q Consensus 325 de~aL~~aL~~g~i~gA~lDV~~~EP~~~----~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~ 400 (656)
|+++|+++|++|+++||++|||+.||++. ++|||++||+|+|||+|++|.|++++++..+++|+.+|++|+.+.+.
T Consensus 239 d~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T~ea~~~~~~~~~~nl~~~l~g~~~~~~ 318 (404)
T 1sc6_A 239 DIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSA 318 (404)
T ss_dssp CHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCSHHHHHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred hHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCcce
Confidence 99999999999999999999999999763 57999999999999999999999999999999999999999999999
Q ss_pred ccCCCCChhhhhhccchHHHHHHHhHHHHHhhcCCCCceEEEEEEeecCCCCCcccccccHHHHHHhhhhhhhccccccc
Q 006212 401 INAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVN 480 (656)
Q Consensus 401 Vn~p~~~~~~~~~l~p~~~laerlG~l~~qL~~g~~~~k~i~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vN 480 (656)
||.|.+. +.
T Consensus 319 vn~p~~~-----------------------------------------~~------------------------------ 327 (404)
T 1sc6_A 319 VNFPEVS-----------------------------------------LP------------------------------ 327 (404)
T ss_dssp SSSCCCC-----------------------------------------CC------------------------------
T ss_pred ecccccc-----------------------------------------cC------------------------------
Confidence 9988765 00
Q ss_pred hHhHhhccCceEEEEEeecCCCCCCCCceEEEEEEecccccceecCCCcEEEEEEEEECCeeEEEEEcceeEEeecCccE
Q 006212 481 ADFTAKQKGLRISEERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGEISIEGKVKFGIPHLTRVGSFGVDASLEGNL 560 (656)
Q Consensus 481 A~~iAke~GI~v~~~~~~~~~~~~~~~ntv~i~l~~~~~~~~~~~~~~~~~~v~Gt~~gG~~rI~~IdGf~V~~~g~~~~ 560 (656)
. . | .+.
T Consensus 328 --------------------~---~--~-------------------------------------------------~~r 333 (404)
T 1sc6_A 328 --------------------L---H--G-------------------------------------------------GRR 333 (404)
T ss_dssp --------------------C---C--S-------------------------------------------------SEE
T ss_pred --------------------c---C--C-------------------------------------------------cce
Confidence 0 0 0 123
Q ss_pred EEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC--CCHHHHHHHhcCCCccEEEEE
Q 006212 561 ILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE--PNQDSLKEIGKVPAIEEYTLL 630 (656)
Q Consensus 561 Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~--~~~e~l~~L~~~~~V~~v~~v 630 (656)
|++.|.|+||+|++|+++|++++|||++|++.| +|+.|+|++++|++ ++++++++|++++++.+++++
T Consensus 334 l~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~A~~vidvD~~~~~~~~~l~~l~~i~~v~~vr~l 403 (404)
T 1sc6_A 334 LMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQMGYVVIDIEADEDVAEKALQAMKAIPGTIRARLL 403 (404)
T ss_dssp EEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSEEEEEEEEECCHHHHHHHHHHHHTSTTEEEEEEC
T ss_pred EEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCEEEEEEEcCCCCCCCHHHHHHHhcCCCeeEEEEe
Confidence 678899999999999999999999999999998 78999999999999 999999999999999999876
No 3
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=2.5e-70 Score=596.33 Aligned_cols=393 Identities=33% Similarity=0.492 Sum_probs=347.5
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCC--cEEEec-CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccccc
Q 006212 88 TPKPTILVSEKLGEAGLAILRSFG--NVECLY-DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGI 164 (656)
Q Consensus 88 ~~~~~ilv~~~l~~~~~~~l~~~~--~v~~~~-~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~Gv 164 (656)
+.++|||+++.+++.+.+.|++.+ ++++.. .++++++.+.++++|++++++.+++++++|+++ |+||+|+++|+|+
T Consensus 13 ~~~~kIl~~~~i~~~~~~~l~~~g~~~v~~~~~~~~~~~l~~~~~~~d~l~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~ 91 (416)
T 3k5p_A 13 RDRINVLLLEGISQTAVEYFKSSGYTNVTHLPKALDKADLIKAISSAHIIGIRSRTQLTEEIFAAA-NRLIAVGCFSVGT 91 (416)
T ss_dssp GGGSCEEECSCCCHHHHHHHHHTTCCCEEECSSCCCHHHHHHHHTTCSEEEECSSCCBCHHHHHHC-TTCCEEEECSSCC
T ss_pred CCCcEEEEECCCCHHHHHHHHHCCCcEEEECCCCCCHHHHHHHccCCEEEEEcCCCCCCHHHHHhC-CCcEEEEECcccc
Confidence 347899999999999999998764 666543 468999999999999999998889999999998 5999999999999
Q ss_pred CccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHH
Q 006212 165 DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEV 244 (656)
Q Consensus 165 D~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~v 244 (656)
||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.+.+++|||+||||+|+||+.+
T Consensus 92 d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGlG~IG~~v 171 (416)
T 3k5p_A 92 NQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGYGNIGSQV 171 (416)
T ss_dssp TTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECCSHHHHHH
T ss_pred CccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEeeCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987677899999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCChhHHHHcCCe-ecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 245 ARRAKGLGMNVIAHDPYAPADKARAVGVE-LVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 245 A~~lk~~G~~Vi~~d~~~~~~~a~~~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
|+++++|||+|++||++..... .+.. ..++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++
T Consensus 172 A~~l~~~G~~V~~yd~~~~~~~---~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~v 248 (416)
T 3k5p_A 172 GNLAESLGMTVRYYDTSDKLQY---GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSD 248 (416)
T ss_dssp HHHHHHTTCEEEEECTTCCCCB---TTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTS
T ss_pred HHHHHHCCCEEEEECCcchhcc---cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChh
Confidence 9999999999999998743211 1233 35899999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHhHhcCCeEEEEeeccCCCCCCCC----CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 006212 324 IDEEALVRALDSGVVAQAALDVFTEEPPAKD----SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (656)
Q Consensus 324 vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~----~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (656)
+|++||+++|++|+|+||++|||+.||++.+ +|||++||+++|||+|++|.|++++++..+++|+.+|++++.+.+
T Consensus 249 vd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~T~ea~~~~~~~~~~nl~~~l~~g~~~~ 328 (416)
T 3k5p_A 249 VDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGSTEEAQERIGTEVTRKLVEYSDVGSTVG 328 (416)
T ss_dssp BCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred hhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999998764 799999999999999999999999999999999999999888888
Q ss_pred cccCCCCChhhhhhccchHHHHHHHhHHHHHhhcCCCCceEEEEEEeecCCCCCcccccccHHHHHHhhhhhhhcccccc
Q 006212 400 AINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLV 479 (656)
Q Consensus 400 ~Vn~p~~~~~~~~~l~p~~~laerlG~l~~qL~~g~~~~k~i~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~v 479 (656)
.||.|.+.. | ..
T Consensus 329 ~Vn~p~~~~-------~--------------------------------------------------------~~----- 340 (416)
T 3k5p_A 329 AVNFPQVQL-------P--------------------------------------------------------PR----- 340 (416)
T ss_dssp BSSSCCCCC-------C--------------------------------------------------------CC-----
T ss_pred eeeCCCcCC-------C--------------------------------------------------------CC-----
Confidence 888753210 0 00
Q ss_pred chHhHhhccCceEEEEEeecCCCCCCCCceEEEEEEecccccceecCCCcEEEEEEEEECCeeEEEEEcceeEEeecCcc
Q 006212 480 NADFTAKQKGLRISEERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGEISIEGKVKFGIPHLTRVGSFGVDASLEGN 559 (656)
Q Consensus 480 NA~~iAke~GI~v~~~~~~~~~~~~~~~ntv~i~l~~~~~~~~~~~~~~~~~~v~Gt~~gG~~rI~~IdGf~V~~~g~~~ 559 (656)
. + .+
T Consensus 341 ------------------~---------~-------------------------------------------------~~ 344 (416)
T 3k5p_A 341 ------------------P---------T-------------------------------------------------GT 344 (416)
T ss_dssp ------------------S---------S-------------------------------------------------SE
T ss_pred ------------------C---------C-------------------------------------------------ce
Confidence 0 0 11
Q ss_pred EEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeC--CCCCHHHHHHHhcCCCccEEEEE
Q 006212 560 LILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD--EEPNQDSLKEIGKVPAIEEYTLL 630 (656)
Q Consensus 560 ~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D--~~~~~e~l~~L~~~~~V~~v~~v 630 (656)
-|.+.|.+.|||+++|.++|+++||||.+|... .+++.|+.++.+| ++.+++++++|++++++..++++
T Consensus 345 r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~--~~~~~~y~~~d~~~~~~~~~~~~~~l~~~~~~~~~r~~ 415 (416)
T 3k5p_A 345 RFMHVHENRPGILNSLMNVFSHHHINIASQFLQ--TDGEVGYLVMEADGVGEASDAVLQEIREIPGTIRARLL 415 (416)
T ss_dssp EEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEE--ECSSCEEEEEEECCCHHHHHHHHHHHHTSTTEEEEEEE
T ss_pred EEEEEecCCccHHHHHHHHHHHcCCCHHHHhcc--CCCceEEEEEEecCCCCCcHHHHHHHHhCCCEEEEEEe
Confidence 133579999999999999999999999999874 4578999999999 78888999999999999999986
No 4
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=1.2e-67 Score=564.82 Aligned_cols=313 Identities=26% Similarity=0.464 Sum_probs=291.2
Q ss_pred CCCCCeEEEeCCCCHhHHHHhhcCCcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccc
Q 006212 87 VTPKPTILVSEKLGEAGLAILRSFGNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVG 163 (656)
Q Consensus 87 ~~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~---~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~G 163 (656)
.+.|||||++++++++.++.|++.+++.+.. ..+++++.+.++++|++++++.+++++++|++++|+||+|+++|+|
T Consensus 25 ~~~~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~l~~~~~~~d~li~~~~~~i~~~~l~~~~~~Lk~I~~~~~G 104 (345)
T 4g2n_A 25 THPIQKAFLCRRFTPAIEAELRQRFDLEVNLEDTVLTPSGIASRAHGAEVLFVTATEAITAEVIRKLQPGLKTIATLSVG 104 (345)
T ss_dssp --CCCEEEESSCCCHHHHHHHHHHSEEEECTTCCCCCHHHHHHHTTTCSEEEECTTSCBCHHHHHHTTTTCCEEEESSSC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHccCCEEEecCCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHHhhcCCceEEEEcCCc
Confidence 3568999999999999999999888887642 4588999999999999999877899999999875699999999999
Q ss_pred cCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc---cccccccCCCEEEEEecChh
Q 006212 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFGKV 240 (656)
Q Consensus 164 vD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~I 240 (656)
+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+|.+. .+.|.+|+||||||||+|+|
T Consensus 105 ~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGIIGlG~I 184 (345)
T 4g2n_A 105 YDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIFGMGRI 184 (345)
T ss_dssp CTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEESCSHH
T ss_pred ccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEEEeChh
Confidence 999999999999999999999999999999999999999999999999999999853 34689999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEc
Q 006212 241 GSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 241 G~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINv 318 (656)
|+++|+++++|||+|++||++. +.+.+ .|+.++ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+
T Consensus 185 G~~vA~~l~~~G~~V~~~dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~ 262 (345)
T 4g2n_A 185 GRAIATRARGFGLAIHYHNRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINI 262 (345)
T ss_dssp HHHHHHHHHTTTCEEEEECSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEECCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEEC
Confidence 9999999999999999999986 33322 277776 9999999999999999999999999999999999999999999
Q ss_pred CCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 006212 319 ARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSA 398 (656)
Q Consensus 319 aRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~ 398 (656)
|||+++|+++|+++|++|+|+||+||||+.|| +.++|||++||+++|||+|++|.|+++++...+++|+.+|++|+++.
T Consensus 263 aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP-~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~l~g~~~~ 341 (345)
T 4g2n_A 263 SRGDLINDDALIEALRSKHLFAAGLDVFANEP-AIDPRYRSLDNIFLTPHIGSATHETRDAMGWLLIQGIEALNQSDVPD 341 (345)
T ss_dssp SCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCT
T ss_pred CCCchhCHHHHHHHHHhCCceEEEecCCCCCC-CCCchHHhCCCEEEcCccCcCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999 67999999999999999999999999999999999999999999998
Q ss_pred cccc
Q 006212 399 TAIN 402 (656)
Q Consensus 399 ~~Vn 402 (656)
+.|+
T Consensus 342 ~~V~ 345 (345)
T 4g2n_A 342 NLIS 345 (345)
T ss_dssp TBCC
T ss_pred CCcC
Confidence 8774
No 5
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=2.5e-66 Score=552.59 Aligned_cols=314 Identities=29% Similarity=0.469 Sum_probs=297.1
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006212 90 KPTILVSEKLGEAGLAILRSFGNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (656)
Q Consensus 90 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~---~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~ 166 (656)
+||||++++++++.++.|++.+++.+.. .++++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+||
T Consensus 2 ~~kvlv~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (330)
T 4e5n_A 2 LPKLVITHRVHEEILQLLAPHCELITNQTDSTLTREEILRRCRDAQAMMAFMPDRVDADFLQAC-PELRVIGCALKGFDN 80 (330)
T ss_dssp CCEEEECSCCCHHHHHHHTTTCEEECCCSSSCCCHHHHHHHHTTCSEEEECTTCCBCHHHHHHC-TTCCEEEESSSCCTT
T ss_pred CCEEEEecCCCHHHHHHHHhCCeEEEecCCCCCCHHHHHHHhCCCeEEEEeCCCCCCHHHHhhC-CCCcEEEECCCcccc
Confidence 6899999999999999999888776542 357899999999999999987789999999998 599999999999999
Q ss_pred cchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc--cccccccCCCEEEEEecChhHHHH
Q 006212 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS--KYVGVSLVGKTLAVMGFGKVGSEV 244 (656)
Q Consensus 167 iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~--~~~g~~l~gktvGIIGlG~IG~~v 244 (656)
||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+|... .+.|.+|+||||||||+|+||+.+
T Consensus 81 id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvGIIG~G~IG~~v 160 (330)
T 4e5n_A 81 FDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVGFLGMGAIGLAM 160 (330)
T ss_dssp BCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEEEECCSHHHHHH
T ss_pred cCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEEEEeeCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999732 346889999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 245 ARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 245 A~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
|+++++|||+|++||++. ..+.+...|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~ 240 (330)
T 4e5n_A 161 ADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSV 240 (330)
T ss_dssp HHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCch
Confidence 999999999999999987 6666777888888999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHhHhcCCeEEEEeeccCCC-------CCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 006212 324 IDEEALVRALDSGVVAQAALDVFTEE-------PPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL 396 (656)
Q Consensus 324 vde~aL~~aL~~g~i~gA~lDV~~~E-------P~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~ 396 (656)
+|+++|+++|++|+|+||++|||+.| |++.++|||++||+++|||+|++|.|+++++...+++|+.+|++|+.
T Consensus 241 vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~g~~ 320 (330)
T 4e5n_A 241 VDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVRLEIERCAAQNILQALAGER 320 (330)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred hCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCChHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999 98889999999999999999999999999999999999999999999
Q ss_pred CCccccCC
Q 006212 397 SATAINAP 404 (656)
Q Consensus 397 ~~~~Vn~p 404 (656)
+.+.||.|
T Consensus 321 ~~~~vn~~ 328 (330)
T 4e5n_A 321 PINAVNRL 328 (330)
T ss_dssp CTTBSSCC
T ss_pred CCCccCCC
Confidence 99999975
No 6
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-65 Score=546.90 Aligned_cols=311 Identities=28% Similarity=0.407 Sum_probs=255.9
Q ss_pred cCCCCCeEEEeCCCCHhHHHHhhcCCcEEEec-CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccccc
Q 006212 86 AVTPKPTILVSEKLGEAGLAILRSFGNVECLY-DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGI 164 (656)
Q Consensus 86 ~~~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~-~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~Gv 164 (656)
..|+||+||++++++++.++.|++.+++.... ..+++++.+.++++|++++++.+++++++++++ |+||+|+++|+||
T Consensus 26 ~~~~~~~vl~~~~~~~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~d~li~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~ 104 (340)
T 4dgs_A 26 FRNVKPDLLLVEPMMPFVMDELQRNYSVHRLYQAADRPALEAALPSIRAVATGGGAGLSNEWMEKL-PSLGIIAINGVGT 104 (340)
T ss_dssp -------CEECSCCCHHHHHTHHHHSCCEETTCGGGHHHHHHHGGGCCEEEEETTTCBCHHHHHHC-SSCCEEEEESSCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHhcCCcEEEeCCCCCHHHHHHHhCCcEEEEEcCCCCCCHHHHhhC-CCCEEEEECCCCc
Confidence 33568999999999999999998877776543 246778888889999999998889999999998 5999999999999
Q ss_pred CccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc-c-ccccccCCCEEEEEecChhHH
Q 006212 165 DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS-K-YVGVSLVGKTLAVMGFGKVGS 242 (656)
Q Consensus 165 D~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~-~-~~g~~l~gktvGIIGlG~IG~ 242 (656)
||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+|.+. . ..|.+|+||||||||+|+||+
T Consensus 105 d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktiGIIGlG~IG~ 184 (340)
T 4dgs_A 105 DKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPKGKRIGVLGLGQIGR 184 (340)
T ss_dssp TTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCTTCEEEEECCSHHHH
T ss_pred cccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCccccccCCEEEEECCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999874 2 257899999999999999999
Q ss_pred HHHHHHhcCCCEEEEECCCCChhHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 243 EVARRAKGLGMNVIAHDPYAPADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 243 ~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
.+|+++++|||+|++||++... ..++.. .++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||
T Consensus 185 ~vA~~l~~~G~~V~~~dr~~~~----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 185 ALASRAEAFGMSVRYWNRSTLS----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp HHHHHHHTTTCEEEEECSSCCT----TSCCEECSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC
T ss_pred HHHHHHHHCCCEEEEEcCCccc----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 9999999999999999998643 234443 48999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 006212 322 GVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAI 401 (656)
Q Consensus 322 ~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~V 401 (656)
+++|+++|+++|++|+|+||+||||+.||++. +|||++|||++|||+|++|.|++++++..+++|+.+|++|+++.+.|
T Consensus 261 ~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~-~~L~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~V 339 (340)
T 4dgs_A 261 NVVDEDALIEALKSGTIAGAGLDVFVNEPAIR-SEFHTTPNTVLMPHQGSATVETRMAMGKLVLANLAAHFAGEKAPNTV 339 (340)
T ss_dssp --------------CCSSEEEESCCSSSSSCC-SHHHHSSSEEECSSCSSCCHHHHHHHHHHHHHHHHHHHTTSCCTTBC
T ss_pred cccCHHHHHHHHHcCCceEEEeCCcCCCCCCc-cchhhCCCEEEcCcCCcCCHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 99999999999999999999999999999864 69999999999999999999999999999999999999999999988
Q ss_pred c
Q 006212 402 N 402 (656)
Q Consensus 402 n 402 (656)
|
T Consensus 340 n 340 (340)
T 4dgs_A 340 N 340 (340)
T ss_dssp -
T ss_pred C
Confidence 7
No 7
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=7.3e-65 Score=541.99 Aligned_cols=274 Identities=29% Similarity=0.455 Sum_probs=256.6
Q ss_pred hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchh
Q 006212 127 KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVS 206 (656)
Q Consensus 127 ~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~ 206 (656)
.++++|+++++..+++++++|+++ |+||+|+++|+|+||||+++|+++||.|+|+||+++.+||||++++||+++|++.
T Consensus 39 ~l~~ad~i~v~~~~~i~~~~l~~~-p~Lk~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~ 117 (334)
T 3kb6_A 39 ELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLK 117 (334)
T ss_dssp HHHHCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHH
T ss_pred HhcCCCEEEEeCCCCCCHHHHhcC-CCCcEEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccc
Confidence 357899999998899999999998 5999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccccccc-cccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCC
Q 006212 207 QADASIKAGKWLRS-KYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATAD 285 (656)
Q Consensus 207 ~~~~~~~~g~W~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aD 285 (656)
++++.+++|+|... ...|.+|+|||+||||+|+||+.+|+++++|||+|++|||+... .....++.++++++++++||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~-~~~~~~~~~~~l~ell~~sD 196 (334)
T 3kb6_A 118 RIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE-DLKEKGCVYTSLDELLKESD 196 (334)
T ss_dssp HHHHHHHTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHTTCEECCHHHHHHHCS
T ss_pred cccccccccccccccccccceecCcEEEEECcchHHHHHHHhhcccCceeeecCCccch-hhhhcCceecCHHHHHhhCC
Confidence 99999999998754 35689999999999999999999999999999999999998643 34567888899999999999
Q ss_pred EEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCC----------
Q 006212 286 FISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDS---------- 355 (656)
Q Consensus 286 vV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~---------- 355 (656)
+|++|||+|++|++|||++.|++||+|++|||+|||++||++||++||++|+|+||+||||+.||++.++
T Consensus 197 ivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~ 276 (334)
T 3kb6_A 197 VISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDK 276 (334)
T ss_dssp EEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHH
T ss_pred EEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999976555
Q ss_pred -----ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 006212 356 -----KLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (656)
Q Consensus 356 -----~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn 402 (656)
||+.+|||++|||+|++|.|++++++..+++|+.+|++|++....+|
T Consensus 277 ~~~~~~L~~~~nvilTPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n 328 (334)
T 3kb6_A 277 NLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGN 328 (334)
T ss_dssp HHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGG
T ss_pred cccchhhccCCCEEECCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 68899999999999999999999999999999999999997755544
No 8
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-63 Score=528.33 Aligned_cols=310 Identities=48% Similarity=0.736 Sum_probs=283.2
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006212 88 TPKPTILVSEKLGEAGLAILRSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (656)
Q Consensus 88 ~~~~~ilv~~~l~~~~~~~l~~~-~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~ 166 (656)
+.+++||+++.+.+...+.|++. .++......+++++.+.++++|++++++.+++++++++++ |+||+|+++|+|+||
T Consensus 24 ~~~~~vli~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 102 (335)
T 2g76_A 24 ANLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAA-EKLQVVGRAGTGVDN 102 (335)
T ss_dssp --CCEEEECSCCCHHHHHHHHHHTCEEEECCSCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-SSCCEEEESSSSCTT
T ss_pred ccceEEEEcCCCCHHHHHHHHhCCCEEEECCCCCHHHHHHHhcCceEEEEcCCCCCCHHHHhhC-CCCcEEEECCCCcch
Confidence 34578999999999988888775 3565555568899999999999999988788999999998 599999999999999
Q ss_pred cchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHH
Q 006212 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVAR 246 (656)
Q Consensus 167 iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~ 246 (656)
||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+++|+|.+..+.+.++.||||||||+|.||+++|+
T Consensus 103 id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgIIGlG~IG~~vA~ 182 (335)
T 2g76_A 103 VDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVAT 182 (335)
T ss_dssp BCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEECCSHHHHHHHH
T ss_pred hChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEEeECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987556788999999999999999999999
Q ss_pred HHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006212 247 RAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (656)
Q Consensus 247 ~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde 326 (656)
++++|||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 183 ~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~ 262 (335)
T 2g76_A 183 RMQSFGMKTIGYDPIISPEVSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDE 262 (335)
T ss_dssp HHHTTTCEEEEECSSSCHHHHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCH
T ss_pred HHHHCCCEEEEECCCcchhhhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCH
Confidence 99999999999999876666677888878999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 006212 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (656)
Q Consensus 327 ~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (656)
++|+++|++|+|+||++|||+.||+ .++|||++||+|+|||++++|.|+++++...+++|+.+|++|+++.+
T Consensus 263 ~aL~~aL~~g~i~gA~lDV~~~EP~-~~~~L~~~~nvilTPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 263 GALLRALQSGQCAGAALDVFTEEPP-RDRALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHTSEEEEEESCCSSSSC-SCCHHHHSTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHhCCccEEEEeecCCCCC-CCchHHhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999995 67999999999999999999999999999999999999999987654
No 9
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=3.6e-64 Score=536.62 Aligned_cols=311 Identities=27% Similarity=0.384 Sum_probs=282.1
Q ss_pred eEEEeCCCCH--hHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccch
Q 006212 92 TILVSEKLGE--AGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDL 169 (656)
Q Consensus 92 ~ilv~~~l~~--~~~~~l~~~~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~ 169 (656)
||++...-.. +.++.+.+..++++......+|+.+.++++|++++++.+++++++++++ |+||+|++.|+|+||||+
T Consensus 2 ki~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~d~li~~~~~~i~~~~l~~~-~~Lk~I~~~~~G~d~id~ 80 (334)
T 2pi1_A 2 NVLFTSVPQEDVPFYQEALKDLSLKIYTTDVSKVPENELKKAELISVFVYDKLTEELLSKM-PRLKLIHTRSVGFDHIDL 80 (334)
T ss_dssp EEEECSCCTTHHHHHHHHTTTSEEEECSSCGGGSCHHHHHHCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCH
T ss_pred EEEEEccChhhHHHHHHHhhcCCEEEECCCCcHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccCH
Confidence 7887664332 2344444444666644444567888999999999987789999999998 589999999999999999
Q ss_pred hhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc-cccccccCCCEEEEEecChhHHHHHHHH
Q 006212 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS-KYVGVSLVGKTLAVMGFGKVGSEVARRA 248 (656)
Q Consensus 170 ~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~l 248 (656)
++|+++||.|+|+|++++.+||||++++||+++|+++++++.+++|.|.+. ...|.+|+||||||||+|+||+++|+++
T Consensus 81 ~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~tvgIiG~G~IG~~vA~~l 160 (334)
T 2pi1_A 81 DYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNRLTLGVIGTGRIGSRVAMYG 160 (334)
T ss_dssp HHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCGGGCBCCGGGSEEEEECCSHHHHHHHHHH
T ss_pred HHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCccccCccceeccCceEEEECcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999876 5578999999999999999999999999
Q ss_pred hcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHH
Q 006212 249 KGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEA 328 (656)
Q Consensus 249 k~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~a 328 (656)
++|||+|++||++..... .+.|+.++++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++
T Consensus 161 ~~~G~~V~~~d~~~~~~~-~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~a 239 (334)
T 2pi1_A 161 LAFGMKVLCYDVVKREDL-KEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDA 239 (334)
T ss_dssp HHTTCEEEEECSSCCHHH-HHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHH
T ss_pred HHCcCEEEEECCCcchhh-HhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHH
Confidence 999999999999875543 2568888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhcCCeEEEEeeccCCCCC---------------CCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 006212 329 LVRALDSGVVAQAALDVFTEEPP---------------AKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALR 393 (656)
Q Consensus 329 L~~aL~~g~i~gA~lDV~~~EP~---------------~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~ 393 (656)
|+++|++|+|+||++|||+.||+ +.++|||++||+++|||+|++|.|+++++...+++|+.+|++
T Consensus 240 L~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~ 319 (334)
T 2pi1_A 240 LYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIITPHIAYYTDKSLERIREETVKVVKAFVK 319 (334)
T ss_dssp HHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEECCccccChHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999997 568899999999999999999999999999999999999999
Q ss_pred CCCCCccccCC
Q 006212 394 GELSATAINAP 404 (656)
Q Consensus 394 g~~~~~~Vn~p 404 (656)
|+++.+.||..
T Consensus 320 g~~~~~~Vn~~ 330 (334)
T 2pi1_A 320 GDLEQIKGNFV 330 (334)
T ss_dssp TCGGGGGGGEE
T ss_pred CCCCCceECcc
Confidence 99999999853
No 10
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=2.9e-63 Score=532.75 Aligned_cols=316 Identities=30% Similarity=0.472 Sum_probs=287.2
Q ss_pred CeEEEeCCCCHhH-----HHHhhcCCcEEEecC--CCHhHHHhhcCCCeEEEE-cCCCCCCHHHHHhcCCcceeEEeccc
Q 006212 91 PTILVSEKLGEAG-----LAILRSFGNVECLYD--LSPEALCEKISQCDALIV-RSGTKVTRSVFEAANGKLKVVGRAGV 162 (656)
Q Consensus 91 ~~ilv~~~l~~~~-----~~~l~~~~~v~~~~~--~~~eel~~~i~~~d~liv-~~~~~v~~e~l~~~~~~LK~I~~~g~ 162 (656)
+||++++.+.... ++.|+. .++++... .+++++.+.++++|++++ ++.+++++++++++ |+||+|+++|+
T Consensus 3 mki~~~d~~~~~~~~~~~~~~l~~-~~v~~~~~~~~~~~~l~~~~~~ad~li~~~~~~~~~~~~l~~~-~~Lk~I~~~g~ 80 (352)
T 3gg9_A 3 LKIAVLDDYQDAVRKLDCFSLLQD-HEVKVFNNTVKGVGQLAARVADVEALVLIRERTRVTRQLLDRL-PKLKIISQTGR 80 (352)
T ss_dssp CEEEECCCTTCCGGGSGGGGGGTT-SEEEECCSCCCSHHHHHHHTTTCSEEEECTTSSCBCHHHHTTC-TTCCEEEESSC
T ss_pred eEEEEEcCccccchhhhhhhhhcC-ceEEEecCCCCCHHHHHHHhcCCeEEEEeCCCCCCCHHHHhhC-CCCeEEEEeCc
Confidence 6899999876432 334443 56666443 367889999999999998 66689999999998 59999999999
Q ss_pred cc----CccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc----------ccccccC
Q 006212 163 GI----DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK----------YVGVSLV 228 (656)
Q Consensus 163 Gv----D~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~----------~~g~~l~ 228 (656)
|+ ||||+++|+++||.|+|+||+ +.+||||++++||+++|+++.+++.+++|+|.+.. ..|.+|+
T Consensus 81 G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~~~~l~ 159 (352)
T 3gg9_A 81 VSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNFGIGRVLK 159 (352)
T ss_dssp CCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTTTSBCCCT
T ss_pred ccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCcccccccccccccccCccCC
Confidence 99 999999999999999999999 99999999999999999999999999999998642 3588999
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHh
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~ 307 (656)
||||||||+|.||+++|+++++|||+|++||++...+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~ 239 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITVADLT 239 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCHHHHT
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCHHHHh
Confidence 99999999999999999999999999999999865555677898887 99999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHH
Q 006212 308 KMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEA 387 (656)
Q Consensus 308 ~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~ 387 (656)
.||+|++|||+|||+++|+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|++|.|+++++...+++|
T Consensus 240 ~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~n 319 (352)
T 3gg9_A 240 RMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCICTPHIGYVERESYEMYFGIAFQN 319 (352)
T ss_dssp TSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccccCCCCChhh
Q 006212 388 VVGALRGELSATAINAPMVPSEV 410 (656)
Q Consensus 388 i~~~l~g~~~~~~Vn~p~~~~~~ 410 (656)
+.+|++|++ .+.||+..+.+.+
T Consensus 320 i~~~~~G~p-~~~Vn~~~~~~~~ 341 (352)
T 3gg9_A 320 ILDILQGNV-DSVANPTALAPAL 341 (352)
T ss_dssp HHHHHTTCC-TTBSCGGGSSCTT
T ss_pred HHHHHcCCC-CcccCHHHHHHHH
Confidence 999999965 5999976665544
No 11
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=3.8e-63 Score=533.17 Aligned_cols=309 Identities=21% Similarity=0.310 Sum_probs=277.0
Q ss_pred CeEEEeCCC--------CHhHHHHhhcCCcEEEecCCCHhHHHh-hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec-
Q 006212 91 PTILVSEKL--------GEAGLAILRSFGNVECLYDLSPEALCE-KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA- 160 (656)
Q Consensus 91 ~~ilv~~~l--------~~~~~~~l~~~~~v~~~~~~~~eel~~-~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~- 160 (656)
++++++++. .++.++.|++.+++......+.+|+.+ .+.++|+++. .+++++++|+++ |+||+|++.
T Consensus 28 r~ivll~~~~~~~~~~~~~~~~~~L~~~~~v~~~~~~~~~e~~~~~~~~~~~i~~--~~~i~~~~l~~~-p~Lk~I~~~~ 104 (365)
T 4hy3_A 28 RPLAISAPEPRSLDLIFSDEARAALHSKYEIVEADPENIAGLGDDILGRARYIIG--QPPLSAETLARM-PALRSILNVE 104 (365)
T ss_dssp CCEEEEECTTSCHHHHCCHHHHHHHHHHSEEEECCGGGGGGSCTTHHHHEEEEEE--CCCCCHHHHTTC-TTCCEEECCS
T ss_pred CCEEEEcCCcccccccCCHHHHHHHhCCcEEEECCCCChHHHHHHhhCCeEEEEe--CCCCCHHHHhhC-CCCeEEEEec
Confidence 345556655 556788898888877544445566554 4568888774 368999999998 599999975
Q ss_pred ccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccc--cccc-cccccccCCCEEEEEec
Q 006212 161 GVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGK--WLRS-KYVGVSLVGKTLAVMGF 237 (656)
Q Consensus 161 g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~--W~~~-~~~g~~l~gktvGIIGl 237 (656)
|+|+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++++++.+|+|+ |.+. .+.+.+|+||||||||+
T Consensus 105 ~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~l~gktvGIIGl 184 (365)
T 4hy3_A 105 SNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARLIAGSEIGIVGF 184 (365)
T ss_dssp SSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCCSSSSEEEEECC
T ss_pred ccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccccCCCEEEEecC
Confidence 89999999999999999999999999999999999999999999999999999999 5432 24688999999999999
Q ss_pred ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEE
Q 006212 238 GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVN 317 (656)
Q Consensus 238 G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailIN 317 (656)
|+||+.+|+++++|||+|++||++...+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||
T Consensus 185 G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN 264 (365)
T 4hy3_A 185 GDLGKALRRVLSGFRARIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFIL 264 (365)
T ss_dssp SHHHHHHHHHHTTSCCEEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEE
T ss_pred CcccHHHHHhhhhCCCEEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEE
Confidence 99999999999999999999999976666777899888999999999999999999999999999999999999999999
Q ss_pred cCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006212 318 VARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELS 397 (656)
Q Consensus 318 vaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (656)
+|||+++|+++|+++|++|+|+ |+||||+.||++.++|||++||+++|||+|++|.|++++++..+++|+.+|++|+++
T Consensus 265 ~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~~t~e~~~~~~~~~~~ni~~~~~G~~~ 343 (365)
T 4hy3_A 265 LSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAGALDSAFKKMGDMVLEDMDLMDRGLPP 343 (365)
T ss_dssp CSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSSCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCccccCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999998 999999999998899999999999999999999999999999999999999999999
Q ss_pred CccccC
Q 006212 398 ATAINA 403 (656)
Q Consensus 398 ~~~Vn~ 403 (656)
.++||.
T Consensus 344 ~~~vn~ 349 (365)
T 4hy3_A 344 MRCKRA 349 (365)
T ss_dssp CSSEEC
T ss_pred cccccc
Confidence 999996
No 12
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=4.5e-63 Score=529.15 Aligned_cols=313 Identities=22% Similarity=0.324 Sum_probs=273.5
Q ss_pred CCeEEEeCCCCH--hHHHHh-hcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHH-HHHhcC-CcceeEEecccc
Q 006212 90 KPTILVSEKLGE--AGLAIL-RSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRS-VFEAAN-GKLKVVGRAGVG 163 (656)
Q Consensus 90 ~~~ilv~~~l~~--~~~~~l-~~~-~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e-~l~~~~-~~LK~I~~~g~G 163 (656)
|+||++.+..+. ..++.+ ++. .++.+......+++.+.++++|++++++.++++++ +|++++ ++||+|+++|+|
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~~~~~G 80 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQALTSATVDLAEGCSSVSLKPLGPVDEEVVYQKLSEYGVKCIGLRIVG 80 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESSCCSTTGGGGGTTCSEEEECCSSCBCCHHHHHHHHHTTCCEEEESSSC
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCCCCCHHHHHHhcCCcEEEEcCCCCcCHHHHHHhccccCceEEEECcee
Confidence 478998874332 223333 233 35655544334678899999999999987899999 999874 369999999999
Q ss_pred cCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHH-cccccc-ccccccccCCCEEEEEecChhH
Q 006212 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIK-AGKWLR-SKYVGVSLVGKTLAVMGFGKVG 241 (656)
Q Consensus 164 vD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~-~g~W~~-~~~~g~~l~gktvGIIGlG~IG 241 (656)
+||||+++|+++||.|+|+|++|+.+||||++++||+++|+++.+++.++ +|+|.. ..+.+.+|+||||||||+|+||
T Consensus 81 ~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktvgIiGlG~IG 160 (343)
T 2yq5_A 81 FNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTVGLIGVGHIG 160 (343)
T ss_dssp CTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEEEEECCSHHH
T ss_pred ecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999 998754 3467899999999999999999
Q ss_pred HHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 242 SEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 242 ~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
+++|+++++|||+|++||++... ..+.++.++++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||
T Consensus 161 ~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 238 (343)
T 2yq5_A 161 SAVAEIFSAMGAKVIAYDVAYNP--EFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARG 238 (343)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCG--GGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred HHHHHHHhhCCCEEEEECCChhh--hhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCC
Confidence 99999999999999999998743 2234567779999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHhHhcCCeEEEEeeccCCCC--CCCC-----------CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHH
Q 006212 322 GVIDEEALVRALDSGVVAQAALDVFTEEP--PAKD-----------SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAV 388 (656)
Q Consensus 322 ~ivde~aL~~aL~~g~i~gA~lDV~~~EP--~~~~-----------~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i 388 (656)
+++|+++|+++|++|+|+||+||||+.|| ++.+ +|||++|||++|||+|++|.|+++++...+++|+
T Consensus 239 ~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~ni 318 (343)
T 2yq5_A 239 ELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVVITPHSAFYTETSIRNMVQICLTDQ 318 (343)
T ss_dssp GGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEEECSSCTTCBHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEEECCccccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 4444 4899999999999999999999999999999999
Q ss_pred HHHHcCCCCCccccCC
Q 006212 389 VGALRGELSATAINAP 404 (656)
Q Consensus 389 ~~~l~g~~~~~~Vn~p 404 (656)
.+|++|+.+.+.||..
T Consensus 319 ~~~l~g~~~~~~v~~~ 334 (343)
T 2yq5_A 319 LTIAKGGRPRSIVNLT 334 (343)
T ss_dssp HHHHTTCCCTTBC---
T ss_pred HHHHcCCCCCceECCc
Confidence 9999999999999853
No 13
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.3e-63 Score=529.37 Aligned_cols=311 Identities=23% Similarity=0.281 Sum_probs=278.9
Q ss_pred CCCCeEEEeCCCCHhHHHHh-hcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006212 88 TPKPTILVSEKLGEAGLAIL-RSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (656)
Q Consensus 88 ~~~~~ilv~~~l~~~~~~~l-~~~-~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD 165 (656)
..|+|||+++++.+...+.| ++. .++++....+.+++.+.++++|+++++. ++++++++++ |+||||+++|+|||
T Consensus 3 ~~~mkili~~~~~~~~~~~L~~~~~p~~~~~~~~~~~~~~~~~~~ad~li~~~--~~~~~~l~~~-~~Lk~I~~~~~G~d 79 (324)
T 3hg7_A 3 LSQRTLLLLSQDNAHYERLLKAAHLPHLRILRADNQSDAEKLIGEAHILMAEP--ARAKPLLAKA-NKLSWFQSTYAGVD 79 (324)
T ss_dssp -CCEEEEEESTTHHHHHHHHHHSCCTTEEEEECSSHHHHHHHGGGCSEEEECH--HHHGGGGGGC-TTCCEEEESSSCCG
T ss_pred ccccEEEEecCCCHHHHHHHhhccCCCeEEEeCCChhHHHHHhCCCEEEEECC--CCCHHHHhhC-CCceEEEECCCCCC
Confidence 45689999999999999999 654 4777765567888899999999999853 4667889887 59999999999999
Q ss_pred ccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHH
Q 006212 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVA 245 (656)
Q Consensus 166 ~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA 245 (656)
|||++++++ ||.|+|+||+++.+||||++++||+++|+++.+++.+++|+|.+ ..+.+|+||||||||+|.||+++|
T Consensus 80 ~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~--~~~~~l~g~tvGIIGlG~IG~~vA 156 (324)
T 3hg7_A 80 VLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQS--HPYQGLKGRTLLILGTGSIGQHIA 156 (324)
T ss_dssp GGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCC--CCCCCSTTCEEEEECCSHHHHHHH
T ss_pred ccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcC--CCCcccccceEEEEEECHHHHHHH
Confidence 999998865 99999999999999999999999999999999999999999986 357899999999999999999999
Q ss_pred HHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhc
Q 006212 246 RRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 246 ~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivd 325 (656)
+++++|||+|++||++.........+....++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|
T Consensus 157 ~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vd 236 (324)
T 3hg7_A 157 HTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAIN 236 (324)
T ss_dssp HHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBC
T ss_pred HHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhC
Confidence 99999999999999876322111112234589999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCC
Q 006212 326 EEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINAPM 405 (656)
Q Consensus 326 e~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn~p~ 405 (656)
+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|++|.+ .++...+++|+.+|++|+++.+.||.+.
T Consensus 237 e~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~nl~~~~~G~~~~~~V~~~~ 314 (324)
T 3hg7_A 237 EGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--DDVAQIFVRNYIRFIDGQPLDGKIDFDK 314 (324)
T ss_dssp HHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--HHHHHHHHHHHHHHHTTCCCTTBCCCC-
T ss_pred HHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--HHHHHHHHHHHHHHHcCCCCcceEChhh
Confidence 99999999999999999999999999999999999999999999999987 5788999999999999999999999764
Q ss_pred C
Q 006212 406 V 406 (656)
Q Consensus 406 ~ 406 (656)
.
T Consensus 315 ~ 315 (324)
T 3hg7_A 315 G 315 (324)
T ss_dssp -
T ss_pred h
Confidence 4
No 14
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=8.8e-63 Score=528.62 Aligned_cols=313 Identities=29% Similarity=0.408 Sum_probs=286.5
Q ss_pred CCCeEEEeCCCCHhHHHHhhcCC-cEEEecC--CCHhHHHhhcCCCeEEEEcCC--CCCCHHHHHhcCCcceeEEecccc
Q 006212 89 PKPTILVSEKLGEAGLAILRSFG-NVECLYD--LSPEALCEKISQCDALIVRSG--TKVTRSVFEAANGKLKVVGRAGVG 163 (656)
Q Consensus 89 ~~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~--~~~eel~~~i~~~d~liv~~~--~~v~~e~l~~~~~~LK~I~~~g~G 163 (656)
.+|++|..+.......+.|++.+ ++.+... .+.+++.+.++++|++|+++. .++++++++++ |+||+|+++|+|
T Consensus 18 ~~~~~lg~~~~~l~~~~~L~~~g~ev~~~~~~~~~~~~~~~~~~~ad~li~~~~~~~~~~~~~l~~~-p~Lk~i~~~g~G 96 (351)
T 3jtm_A 18 KNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKA-KNLKLLLTAGIG 96 (351)
T ss_dssp HCTTCCSSTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHTTTCSEEEECTTSCCCBCHHHHHHC-SSCCEEEESSSC
T ss_pred cCCCEEEeccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHHHhCCCEEEEEccCCCCCCCHHHHhhC-CCCeEEEEeCee
Confidence 37788888877777788888774 6665432 356789999999999998753 46999999998 599999999999
Q ss_pred cCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc--ccccccCCCEEEEEecChhH
Q 006212 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK--YVGVSLVGKTLAVMGFGKVG 241 (656)
Q Consensus 164 vD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktvGIIGlG~IG 241 (656)
+||||+++|+++||.|+|+||+|+.+||||++++||+++|++.++++.+++|+|.... ..+.+|+||||||||+|+||
T Consensus 97 ~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIG~G~IG 176 (351)
T 3jtm_A 97 SDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIG 176 (351)
T ss_dssp CTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHH
T ss_pred ecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeEEEeCHHH
Confidence 9999999999999999999999999999999999999999999999999999998643 24789999999999999999
Q ss_pred HHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 242 SEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 242 ~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
+.+|+++++|||+|++||++. +.+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|
T Consensus 177 ~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 256 (351)
T 3jtm_A 177 KLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNA 256 (351)
T ss_dssp HHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECS
T ss_pred HHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECc
Confidence 999999999999999999986 5666777888876 89999999999999999999999999999999999999999999
Q ss_pred CCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC--C
Q 006212 320 RGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL--S 397 (656)
Q Consensus 320 Rg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~--~ 397 (656)
||+++|+++|+++|++|+|+||++|||+.||++.++|||++||+++|||+|+.|.|++.+++..+++|+.+|++|++ +
T Consensus 257 RG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~g~~~~~ 336 (351)
T 3jtm_A 257 RGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFKGEDFPT 336 (351)
T ss_dssp CGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHHTCCCCG
T ss_pred CchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999995 5
Q ss_pred Ccccc
Q 006212 398 ATAIN 402 (656)
Q Consensus 398 ~~~Vn 402 (656)
.+.|+
T Consensus 337 ~~~i~ 341 (351)
T 3jtm_A 337 ENYIV 341 (351)
T ss_dssp GGEEE
T ss_pred ceEEe
Confidence 55554
No 15
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=5.7e-62 Score=514.40 Aligned_cols=304 Identities=42% Similarity=0.675 Sum_probs=283.3
Q ss_pred CCeEEEeCCCCHhHHHHhhcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccc
Q 006212 90 KPTILVSEKLGEAGLAILRSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVD 168 (656)
Q Consensus 90 ~~~ilv~~~l~~~~~~~l~~~-~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD 168 (656)
|+||++++.+.+...+.|++. .++......+++++.+.+.++|++++++.+++++++++++ |+||+|++.|+|+||||
T Consensus 3 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id 81 (307)
T 1wwk_A 3 RMKVLVAAPLHEKAIQVLKDAGLEVIYEEYPDEDRLVELVKDVEAIIVRSKPKVTRRVIESA-PKLKVIARAGVGLDNID 81 (307)
T ss_dssp -CEEEECSCCCHHHHHHHHHTTCEEEECSSCCHHHHHHHSTTCSEEEESSCSCBCHHHHTTC-TTCCEEEESSSCCTTBC
T ss_pred ceEEEEeCCCCHHHHHHHHhCCeEEEeCCCCCHHHHHHHhcCCEEEEEcCCCCCCHHHHhhC-CCCeEEEECCccccccC
Confidence 578999999998888888774 3454444467889999999999999987667999999988 59999999999999999
Q ss_pred hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHH
Q 006212 169 LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRA 248 (656)
Q Consensus 169 ~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l 248 (656)
+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+|.+..+.+.+|.|+||||||+|+||+++|+++
T Consensus 82 ~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~~A~~l 161 (307)
T 1wwk_A 82 VEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGIIGFGRIGYQVAKIA 161 (307)
T ss_dssp HHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEECCSHHHHHHHHHH
T ss_pred HHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEEccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998644668899999999999999999999999
Q ss_pred hcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHH
Q 006212 249 KGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEA 328 (656)
Q Consensus 249 k~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~a 328 (656)
++|||+|++||++...+.+.+.|+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++
T Consensus 162 ~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~a 241 (307)
T 1wwk_A 162 NALGMNILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNA 241 (307)
T ss_dssp HHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHH
T ss_pred HHCCCEEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHH
Confidence 99999999999987666667788888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcC
Q 006212 329 LVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRG 394 (656)
Q Consensus 329 L~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g 394 (656)
|+++|++|+|+||++|||+.||++.++|||+++|+|+|||++++|.|+++++...+++|+.+|++|
T Consensus 242 L~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 242 LVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERAGVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999998899999999999999999999999999999999999999976
No 16
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=2.8e-63 Score=527.40 Aligned_cols=309 Identities=25% Similarity=0.355 Sum_probs=272.0
Q ss_pred CCeEEEeCCCCHhHHHHhhcCC-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHH-HhcCCcceeEEecccccCcc
Q 006212 90 KPTILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVF-EAANGKLKVVGRAGVGIDNV 167 (656)
Q Consensus 90 ~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l-~~~~~~LK~I~~~g~GvD~i 167 (656)
|+|||++++++++.++.|++.+ ++++.... +...+.+.++|+++++. .++ ++++ +++ |+||+|+++|+|||||
T Consensus 1 m~kil~~~~~~~~~~~~L~~~~~~~~~~~~~--~~~~~~~~~ad~l~~~~-~~~-~~~l~~~~-~~Lk~I~~~~~G~d~i 75 (324)
T 3evt_A 1 MSLVLMAQATKPEQLQQLQTTYPDWTFKDAA--AVTAADYDQIEVMYGNH-PLL-KTILARPT-NQLKFVQVISAGVDYL 75 (324)
T ss_dssp -CEEEECSCCCHHHHHHHHHHCTTCEEEETT--SCCTTTGGGEEEEESCC-THH-HHHHHSTT-CCCCEEECSSSCCTTS
T ss_pred CcEEEEecCCCHHHHHHHHhhCCCeEEecCC--ccChHHhCCcEEEEECC-cCh-HHHHHhhC-CCceEEEECCcccccc
Confidence 4689999999999999998764 44433211 11223467899988764 457 8999 566 6999999999999999
Q ss_pred chhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHH-HHHHHccccccccccccccCCCEEEEEecChhHHHHHH
Q 006212 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQA-DASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVAR 246 (656)
Q Consensus 168 D~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~-~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~ 246 (656)
|+++|+++||.|+|+||+|+.+||||++++||+++|+++++ ++.+++|+|.+.. .+.+|+||||||||+|.||+++|+
T Consensus 76 d~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~-~~~~l~gktvGIiGlG~IG~~vA~ 154 (324)
T 3evt_A 76 PLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM-TTSTLTGQQLLIYGTGQIGQSLAA 154 (324)
T ss_dssp CHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS-CCCCSTTCEEEEECCSHHHHHHHH
T ss_pred CHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC-CCccccCCeEEEECcCHHHHHHHH
Confidence 99999999999999999999999999999999999999999 9999999998753 588999999999999999999999
Q ss_pred HHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006212 247 RAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (656)
Q Consensus 247 ~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde 326 (656)
++++|||+|++||++..........+...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 155 ~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 234 (324)
T 3evt_A 155 KASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDT 234 (324)
T ss_dssp HHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCH
T ss_pred HHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhH
Confidence 99999999999998753221111123345899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCC-CCCccccCC
Q 006212 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGE-LSATAINAP 404 (656)
Q Consensus 327 ~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~-~~~~~Vn~p 404 (656)
++|+++|++|+|+||++|||+.||++.++|||++|||++|||+|++|.|+++++...+++|+.+|++|+ ++.|.||.+
T Consensus 235 ~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~~~l~~~~~~~n~V~~~ 313 (324)
T 3evt_A 235 TALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRATVFPIFAANFAQFVKDGTLVRNQVDLN 313 (324)
T ss_dssp HHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHHHHHHHHHHHHHHHHHSCCCSCBCC--
T ss_pred HHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHHHHHHHHHHHHHHHhCCCCCCceECcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999755 678999865
No 17
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=7.5e-61 Score=511.22 Aligned_cols=310 Identities=26% Similarity=0.370 Sum_probs=276.0
Q ss_pred CeEEEeCC--CCHhHHHHhhcCC---cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc--ceeEEecccc
Q 006212 91 PTILVSEK--LGEAGLAILRSFG---NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK--LKVVGRAGVG 163 (656)
Q Consensus 91 ~~ilv~~~--l~~~~~~~l~~~~---~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~--LK~I~~~g~G 163 (656)
+||++... ..+..++.|++.. ++.+......+++.+.+.++|++++++.++++++++++++ + ||+|+++|+|
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~~Lk~I~~~~~G 80 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKLLTPETVALAKGADGVVVYQQLDYIAETLQALA-DNGITKMSLRNVG 80 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSCCCTTTGGGGTTCSEEEECCSSCBCHHHHHHHH-HTTCCEEEESSSC
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCCCcHHHHHHhcCCcEEEEcCCCCCCHHHHHhcc-ccCCeEEEECCcc
Confidence 47887653 3345566676533 4544433344678888999999999877789999999884 6 9999999999
Q ss_pred cCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHH
Q 006212 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSE 243 (656)
Q Consensus 164 vD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~ 243 (656)
+||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|+|.+....+.++.|+||||||+|.||+.
T Consensus 81 ~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (333)
T 1j4a_A 81 VDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQV 160 (333)
T ss_dssp CTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHH
T ss_pred cccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEEccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999975556788999999999999999999
Q ss_pred HHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 244 VARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 244 vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
+|+++++|||+|++||++.... +.+ .+.++ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~ 238 (333)
T 1j4a_A 161 FMQIMEGFGAKVITYDIFRNPE-LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGP 238 (333)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH-HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHHHHCCCEEEEECCCcchh-HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCc
Confidence 9999999999999999987544 333 35666 89999999999999999999999999999999999999999999999
Q ss_pred hhcHHHHHHhHhcCCeEEEEeeccCCCC--CCCCC-----------ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 006212 323 VIDEEALVRALDSGVVAQAALDVFTEEP--PAKDS-----------KLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVV 389 (656)
Q Consensus 323 ivde~aL~~aL~~g~i~gA~lDV~~~EP--~~~~~-----------~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~ 389 (656)
++|+++|+++|++|+|+||+||||+.|| ++.++ |||++|||++|||+|++|.|+++++...+++|+.
T Consensus 239 ~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (333)
T 1j4a_A 239 LVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVTPKTAFYTTHAVRNMVVKAFDNNL 318 (333)
T ss_dssp GBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEECSSCTTCBHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEECCccccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 34433 5999999999999999999999999999999999
Q ss_pred HHHcCCCCCccccC
Q 006212 390 GALRGELSATAINA 403 (656)
Q Consensus 390 ~~l~g~~~~~~Vn~ 403 (656)
+|++|+++.+.||.
T Consensus 319 ~~~~g~~~~~~v~~ 332 (333)
T 1j4a_A 319 ELVEGKEAETPVKV 332 (333)
T ss_dssp HHHTTCCCSSBCCC
T ss_pred HHHcCCCCCccccC
Confidence 99999999888874
No 18
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=3.8e-60 Score=503.19 Aligned_cols=305 Identities=31% Similarity=0.481 Sum_probs=282.9
Q ss_pred CeEEEeCCCCHhHHHHhhcCCcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc-ceeEEecccccCc
Q 006212 91 PTILVSEKLGEAGLAILRSFGNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK-LKVVGRAGVGIDN 166 (656)
Q Consensus 91 ~~ilv~~~l~~~~~~~l~~~~~v~~~~---~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~-LK~I~~~g~GvD~ 166 (656)
++|++++.+++...+.|++..++.+.. ..+++++.+.++++|++++++.++++++++++++ + ||||+++|+|+||
T Consensus 2 ~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~Lk~I~~~~~G~d~ 80 (320)
T 1gdh_A 2 KKILITWPLPEAAMARARESYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIP-ENIKCISTYSIGFDH 80 (320)
T ss_dssp CEEEESSCCCHHHHHHHHTTSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSC-TTCCEEEEESSCCTT
T ss_pred cEEEEcCCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHHhCC-ccceEEEECCccccc
Confidence 689999999999899998766766542 2577899999999999999877789999999984 8 9999999999999
Q ss_pred cchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc---cccccccCCCEEEEEecChhHHH
Q 006212 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFGKVGSE 243 (656)
Q Consensus 167 iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~IG~~ 243 (656)
||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|... .+.+.++.|+||||||+|+||++
T Consensus 81 id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~ 160 (320)
T 1gdh_A 81 IDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQA 160 (320)
T ss_dssp BCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHH
T ss_pred ccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999732 24678999999999999999999
Q ss_pred HHHHHhcCCCEEEEECC-CCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 244 VARRAKGLGMNVIAHDP-YAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 244 vA~~lk~~G~~Vi~~d~-~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
+|+++++|||+|++||+ +.....+.+.|+..+ ++++++++||+|++|+|++++|+++++++.++.||+|++|||++||
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg 240 (320)
T 1gdh_A 161 LAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARG 240 (320)
T ss_dssp HHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred HHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence 99999999999999999 876555667788877 8999999999999999999999999999999999999999999999
Q ss_pred chhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCC
Q 006212 322 GVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSA 398 (656)
Q Consensus 322 ~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~ 398 (656)
+++|+++|.++|++|+|+||++|||+.|| +.++|||+++|+|+|||++++|.|+++++...+ +|+.+|++|+++.
T Consensus 241 ~~vd~~aL~~aL~~g~i~gA~lDv~~~eP-~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~-~nl~~~~~g~~~~ 315 (320)
T 1gdh_A 241 DLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYDLPNTFLFPHIGSAATQAREDMAHQA-NDLIDALFGGADM 315 (320)
T ss_dssp GGBCHHHHHHHHHHTSEEEEEESCCTTTT-SCCTTGGGCTTEEECSSCTTCBHHHHHHHHHHH-HHHHHHHHTTSCC
T ss_pred cccCHHHHHHHHHhCCCcEEEEeCCCCCC-CCCChhhhCCCEEECCcCCcCcHHHHHHHHHHH-HHHHHHHcCCCCc
Confidence 99999999999999999999999999999 678999999999999999999999999999999 9999999998653
No 19
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.2e-60 Score=503.61 Aligned_cols=304 Identities=36% Similarity=0.531 Sum_probs=283.1
Q ss_pred CCeEEEeCCCCHhHHHHhhcCC-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccc
Q 006212 90 KPTILVSEKLGEAGLAILRSFG-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVD 168 (656)
Q Consensus 90 ~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD 168 (656)
++|||+++++.+...+.|++.+ ++.+....+++++.+.++++|++++++.+++++++++++ |+||+|++.|+|+||||
T Consensus 5 ~mkil~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id 83 (313)
T 2ekl_A 5 TVKALITDPIDEILIKTLREKGIQVDYMPEISKEELLNIIGNYDIIVVRSRTKVTKDVIEKG-KKLKIIARAGIGLDNID 83 (313)
T ss_dssp CCEEEECSCCCHHHHHHHHHTTCEEEECTTCCHHHHHHHGGGCSEEEECSSSCBCHHHHHHC-TTCCEEEECSSCCTTBC
T ss_pred ceEEEEECCCCHHHHHHHHhCCcEEEeCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEEcCCCCCccC
Confidence 3589999999998888888763 554434567889999999999999987778999999998 59999999999999999
Q ss_pred hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHH
Q 006212 169 LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRA 248 (656)
Q Consensus 169 ~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~l 248 (656)
+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|. .+.+.++.|+||||||+|+||+++|+++
T Consensus 84 ~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~--~~~~~~l~g~~vgIIG~G~IG~~~A~~l 161 (313)
T 2ekl_A 84 TEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFK--KIEGLELAGKTIGIVGFGRIGTKVGIIA 161 (313)
T ss_dssp HHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCC--CCCCCCCTTCEEEEESCSHHHHHHHHHH
T ss_pred HHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC--CCCCCCCCCCEEEEEeeCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996 3568899999999999999999999999
Q ss_pred hcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHH
Q 006212 249 KGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEA 328 (656)
Q Consensus 249 k~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~a 328 (656)
+++||+|++||++.....+.+.|+...++++++++||+|++|+|++++|+++++++.++.||+|++|||++||+++|+++
T Consensus 162 ~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~a 241 (313)
T 2ekl_A 162 NAMGMKVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKA 241 (313)
T ss_dssp HHTTCEEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHH
T ss_pred HHCCCEEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHH
Confidence 99999999999987655567788887899999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHhcCCeEEEEeeccCCCCCCCCC---ccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006212 329 LVRALDSGVVAQAALDVFTEEPPAKDS---KLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELS 397 (656)
Q Consensus 329 L~~aL~~g~i~gA~lDV~~~EP~~~~~---~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (656)
|.++|++|+|+||++|||+.||++ ++ |||++||+|+|||++++|.|+++++...+++|+.+|++|++.
T Consensus 242 L~~aL~~g~i~ga~lDv~~~eP~~-~~~~~~L~~~~nviltPH~~~~t~~~~~~~~~~~~~n~~~~~~g~~l 312 (313)
T 2ekl_A 242 LLDYIKKGKVYAYATDVFWNEPPK-EEWELELLKHERVIVTTHIGAQTKEAQKRVAEMTTQNLLNAMKELGM 312 (313)
T ss_dssp HHHHHHTTCEEEEEESCCSSSSCC-SHHHHHHHHSTTEEECCSCTTCSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCcEEEEecCCCCCCC-CcccchHhhCCCEEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999987 66 999999999999999999999999999999999999999864
No 20
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=5.7e-61 Score=512.10 Aligned_cols=310 Identities=27% Similarity=0.404 Sum_probs=274.7
Q ss_pred eEEEeC--CCCHhHHHHhhcC-C-cEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc--ceeEEecccccC
Q 006212 92 TILVSE--KLGEAGLAILRSF-G-NVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK--LKVVGRAGVGID 165 (656)
Q Consensus 92 ~ilv~~--~l~~~~~~~l~~~-~-~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~--LK~I~~~g~GvD 165 (656)
||++++ +.....++.+.+. . ++.+......+++.+.++++|++++++.++++++++++++ + ||+|+++|+|+|
T Consensus 2 kil~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~~Lk~I~~~~~G~d 80 (333)
T 1dxy_A 2 KIIAYGARVDEIQYFKQWAKDTGNTLEYHTEFLDENTVEWAKGFDGINSLQTTPYAAGVFEKMH-AYGIKFLTIRNVGTD 80 (333)
T ss_dssp EEEECSCCTTTHHHHHHHHHHHCCEEEECSSCCCTTGGGGGTTCSEEEECCSSCBCHHHHHHHH-HTTCCEEEESSSCCT
T ss_pred EEEEEeccccCHHHHHHHHHhCCeEEEEcCCCChHHHHHHhcCCeEEEEcCCCCCCHHHHHhCc-ccCceEEEEcCcccC
Confidence 678754 4455566666442 2 4554443345678888999999999877789999999884 6 999999999999
Q ss_pred ccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccc-ccccccccCCCEEEEEecChhHHHH
Q 006212 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLR-SKYVGVSLVGKTLAVMGFGKVGSEV 244 (656)
Q Consensus 166 ~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~gktvGIIGlG~IG~~v 244 (656)
|||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|.+ ....+.+|.|+||||||+|.||+.+
T Consensus 81 ~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~~ 160 (333)
T 1dxy_A 81 NIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVA 160 (333)
T ss_dssp TBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEEECcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999964 3456889999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 245 ARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 245 A~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
|+++++|||+|++||++.... +. .++.+.++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++
T Consensus 161 A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~v 238 (333)
T 1dxy_A 161 IKLFKGFGAKVIAYDPYPMKG-DH-PDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLI 238 (333)
T ss_dssp HHHHHHTTCEEEEECSSCCSS-CC-TTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSB
T ss_pred HHHHHHCCCEEEEECCCcchh-hH-hccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCccc
Confidence 999999999999999986432 22 2355679999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhHhcCCeEEEEeeccCCCCC--C--------CC---CccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHH
Q 006212 325 DEEALVRALDSGVVAQAALDVFTEEPP--A--------KD---SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGA 391 (656)
Q Consensus 325 de~aL~~aL~~g~i~gA~lDV~~~EP~--~--------~~---~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~ 391 (656)
|+++|+++|++|+|+||+||||+.||+ + .+ +|||++|||++|||+|++|.|+++++...+++|+.+|
T Consensus 239 d~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~TPHia~~t~e~~~~~~~~~~~nl~~~ 318 (333)
T 1dxy_A 239 DTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIAYYTETAVHNMVYFSLQHLVDF 318 (333)
T ss_dssp CHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEECCccccChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999983 1 12 5799999999999999999999999999999999999
Q ss_pred HcCCCCCccccCC
Q 006212 392 LRGELSATAINAP 404 (656)
Q Consensus 392 l~g~~~~~~Vn~p 404 (656)
++|+++.+.||.|
T Consensus 319 ~~g~~~~~~v~~~ 331 (333)
T 1dxy_A 319 LTKGETSTEVTGP 331 (333)
T ss_dssp HHHSCCTTEECC-
T ss_pred HcCCCCCceeCCC
Confidence 9999999999976
No 21
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=7.6e-60 Score=498.97 Aligned_cols=304 Identities=34% Similarity=0.493 Sum_probs=279.7
Q ss_pred CeEEEeCCCCHhHHHHhhcC-CcEEEec--CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006212 91 PTILVSEKLGEAGLAILRSF-GNVECLY--DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (656)
Q Consensus 91 ~~ilv~~~l~~~~~~~l~~~-~~v~~~~--~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~i 167 (656)
||||+++.++++.++.|++. .++.+.. ..+.+++.+.++++|+++++..+++++++++++ |+||+|+++|+|+|||
T Consensus 1 ~~vl~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~i~~~~~G~d~i 79 (311)
T 2cuk_A 1 MRVLVTRTLPGKALDRLRERGLEVEVHRGLFLPKAELLKRVEGAVGLIPTVEDRIDAEVMDRA-KGLKVIACYSVGVDHV 79 (311)
T ss_dssp CEEEESSCCSSSTTHHHHHTTCEEEECCSSCCCHHHHHHHHTTCSEEECCTTSCBCHHHHHHS-TTCCEEECSSSCCTTB
T ss_pred CEEEEeCCCCHHHHHHHHhcCCeEEEecCCCCCHHHHHHHhcCCeEEEEcCCCCCCHHHHhhC-CCCeEEEECCcCcccc
Confidence 57999999988888888887 5776542 347889999999999999887678999999998 5999999999999999
Q ss_pred chhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc---cccccccCCCEEEEEecChhHHHH
Q 006212 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFGKVGSEV 244 (656)
Q Consensus 168 D~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~IG~~v 244 (656)
|+++|+++||.|+|+||+|+.+||||++++||+++|+++.+++.+++|.|.+. .+.+.++.|+||||||+|.||+.+
T Consensus 80 d~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~IG~~~ 159 (311)
T 2cuk_A 80 DLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGRIGQAV 159 (311)
T ss_dssp CHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHH
T ss_pred CHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECHHHHHH
Confidence 99999999999999999999999999999999999999999999999999642 235789999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 245 ARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 245 A~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
|+++++|||+|++||++..... +...++++++++||+|++|+|++++|+++++++.++.||+|+++||++||+++
T Consensus 160 A~~l~~~G~~V~~~d~~~~~~~-----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~v 234 (311)
T 2cuk_A 160 AKRALAFGMRVVYHARTPKPLP-----YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALV 234 (311)
T ss_dssp HHHHHHTTCEEEEECSSCCSSS-----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGB
T ss_pred HHHHHHCCCEEEEECCCCcccc-----cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCcc
Confidence 9999999999999999863322 34568999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccc
Q 006212 325 DEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAI 401 (656)
Q Consensus 325 de~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~V 401 (656)
|+++|.++|+ |+|+||++|||+.||++.++|||+++|+|+|||++++|.|+++++...+++|+.+|++|+++.+.|
T Consensus 235 d~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 235 DTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAEVAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp CHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBC
T ss_pred CHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999 999999999999999888999999999999999999999999999999999999999999877655
No 22
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=2.1e-60 Score=507.34 Aligned_cols=308 Identities=24% Similarity=0.335 Sum_probs=274.6
Q ss_pred eEEEeC--CCCHhHHHHhhcCC--cEEEec-CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCc--ceeEEeccccc
Q 006212 92 TILVSE--KLGEAGLAILRSFG--NVECLY-DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGK--LKVVGRAGVGI 164 (656)
Q Consensus 92 ~ilv~~--~l~~~~~~~l~~~~--~v~~~~-~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~--LK~I~~~g~Gv 164 (656)
||++++ ++.+..++.+.+.. ++.+.. ..+++++.+.++++|++++++.++++++++++++ + ||+|+++|+|+
T Consensus 2 ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~~-~~~Lk~I~~~~~G~ 80 (331)
T 1xdw_A 2 KVLCYGVRDVELPIFEACNKEFGYDIKCVPDYLNTKETAEMAAGFDAVILRGNCFANKQNLDIYK-KLGVKYILTRTAGT 80 (331)
T ss_dssp EEEECSCCTTTHHHHHHHGGGTCCEEEECSCCSCSHHHHHTTTTCSEEEECTTCCBCHHHHHHHH-HHTCCEEEESSSCC
T ss_pred EEEEEecCccCHHHHHHHHHhcCeEEEECCCCCCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhCc-ccCceEEEEccccc
Confidence 688854 45566677775533 344433 2355888899999999999877889999999884 7 99999999999
Q ss_pred CccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccc-ccccccccCCCEEEEEecChhHHH
Q 006212 165 DNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLR-SKYVGVSLVGKTLAVMGFGKVGSE 243 (656)
Q Consensus 165 D~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~-~~~~g~~l~gktvGIIGlG~IG~~ 243 (656)
||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.. ....+.++.|+||||||+|.||+.
T Consensus 81 d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIiG~G~IG~~ 160 (331)
T 1xdw_A 81 DHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGVVGLGRIGRV 160 (331)
T ss_dssp TTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEEECCSHHHHH
T ss_pred cccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEEECcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999964 345688999999999999999999
Q ss_pred HHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 244 VARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 244 vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
+|+++++|||+|++||++.... +. .++.+.++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||++
T Consensus 161 ~A~~l~~~G~~V~~~d~~~~~~-~~-~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~ 238 (331)
T 1xdw_A 161 AAQIFHGMGATVIGEDVFEIKG-IE-DYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQL 238 (331)
T ss_dssp HHHHHHHTTCEEEEECSSCCCS-CT-TTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGG
T ss_pred HHHHHHHCCCEEEEECCCccHH-HH-hccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccc
Confidence 9999999999999999986432 22 235667999999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHhHhcCCeEEEEeeccCCCCC--CCC-------C----ccccC-CcEEEcCCCCCCcHHHHHHHHHHHHHHHH
Q 006212 324 IDEEALVRALDSGVVAQAALDVFTEEPP--AKD-------S----KLVQH-ENVTVTPHLGASTKEAQEGVAIEIAEAVV 389 (656)
Q Consensus 324 vde~aL~~aL~~g~i~gA~lDV~~~EP~--~~~-------~----~L~~~-~nvilTPH~g~~T~ea~~~~~~~~~~~i~ 389 (656)
+|+++|+++|++|+|+||+||||+.||+ +.+ + |||++ |||++|||+|++|.|+++++...+++|+.
T Consensus 239 vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvilTPHia~~t~~~~~~~~~~~~~nl~ 318 (331)
T 1xdw_A 239 VDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLITPHLGSYTDEAVKNMVEVSYQNLK 318 (331)
T ss_dssp BCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEECCSCTTCSHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEEcCccccChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999994 222 3 79999 99999999999999999999999999999
Q ss_pred HHHcCCCCCcccc
Q 006212 390 GALRGELSATAIN 402 (656)
Q Consensus 390 ~~l~g~~~~~~Vn 402 (656)
+|++|+++.+.||
T Consensus 319 ~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 319 DLAETGDCPNKIK 331 (331)
T ss_dssp HHHHHSCCTTBCC
T ss_pred HHHcCCCCCCCCC
Confidence 9999998888776
No 23
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=1.9e-60 Score=513.55 Aligned_cols=313 Identities=27% Similarity=0.353 Sum_probs=283.6
Q ss_pred CCCeEEEeCCCCHhHHHHhhcCC-cEEEecC--CCHhHHHhhcCCCeEEEEcCC--CCCCHHHHHhcCCcceeEEecccc
Q 006212 89 PKPTILVSEKLGEAGLAILRSFG-NVECLYD--LSPEALCEKISQCDALIVRSG--TKVTRSVFEAANGKLKVVGRAGVG 163 (656)
Q Consensus 89 ~~~~ilv~~~l~~~~~~~l~~~~-~v~~~~~--~~~eel~~~i~~~d~liv~~~--~~v~~e~l~~~~~~LK~I~~~g~G 163 (656)
.+|+||+.+...+...+.|++.+ ++.+... .+.+++.+.+.++|+++++.. +++++++++++ |+||+|+++|+|
T Consensus 16 ~~~~vl~~d~~~~~~~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G 94 (364)
T 2j6i_A 16 DEEKLYGCTENKLGIANWLKDQGHELITTSDKEGGNSVLDQHIPDADIIITTPFHPAYITKERIDKA-KKLKLVVVAGVG 94 (364)
T ss_dssp HCTTCTTBTTTGGGCHHHHHHTTCEEEEESCCSSTTSHHHHHGGGCSEEEECTTSCCCBCHHHHHHC-TTCCEEEESSSC
T ss_pred cCceEEEecCccHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHhhCCeEEEecCcCCCCCCHHHHhhC-CCCeEEEECCcc
Confidence 47889999998888888887754 6655432 246789999999999998653 36999999998 599999999999
Q ss_pred cCccchhhHHhc--CceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc--ccccccCCCEEEEEecCh
Q 006212 164 IDNVDLQAATEF--GCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK--YVGVSLVGKTLAVMGFGK 239 (656)
Q Consensus 164 vD~iD~~aa~~~--GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktvGIIGlG~ 239 (656)
+||||+++|+++ ||.|+|+||+|+.+||||++++||+++|+++.+++.+++|+|.+.. ..+.+|+|+||||||+|+
T Consensus 95 ~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~ 174 (364)
T 2j6i_A 95 SDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGR 174 (364)
T ss_dssp CTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSH
T ss_pred cccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCEEEEECcCH
Confidence 999999999999 9999999999999999999999999999999999999999997532 257899999999999999
Q ss_pred hHHHHHHHHhcCCCE-EEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEE
Q 006212 240 VGSEVARRAKGLGMN-VIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV 316 (656)
Q Consensus 240 IG~~vA~~lk~~G~~-Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailI 316 (656)
||+.+|+++++|||+ |++||++. ..+.+.+.|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++||
T Consensus 175 IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lI 254 (364)
T 2j6i_A 175 IGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLV 254 (364)
T ss_dssp HHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEE
Confidence 999999999999997 99999876 5555667787765 89999999999999999999999999999999999999999
Q ss_pred EcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccC--C---cEEEcCCCCCCcHHHHHHHHHHHHHHHHHH
Q 006212 317 NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQH--E---NVTVTPHLGASTKEAQEGVAIEIAEAVVGA 391 (656)
Q Consensus 317 NvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~--~---nvilTPH~g~~T~ea~~~~~~~~~~~i~~~ 391 (656)
|++||+++|+++|+++|++|+|+||+||||+.||++.++|||.+ | |+++|||+|++|.|++.+++..+++|+.+|
T Consensus 255 n~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~t~e~~~~~~~~~~~nl~~~ 334 (364)
T 2j6i_A 255 NTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGTTLDAQTRYAQGTVNILESF 334 (364)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999889999999 9 999999999999999999999999999999
Q ss_pred HcCC---CCCcccc
Q 006212 392 LRGE---LSATAIN 402 (656)
Q Consensus 392 l~g~---~~~~~Vn 402 (656)
++|+ .+.|+|+
T Consensus 335 ~~g~~~~~~~n~v~ 348 (364)
T 2j6i_A 335 FTGKFDYRPQDIIL 348 (364)
T ss_dssp HTTCCCCCGGGEEE
T ss_pred HcCCCCCCCCceec
Confidence 9998 4455554
No 24
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=1.4e-59 Score=504.35 Aligned_cols=320 Identities=26% Similarity=0.357 Sum_probs=289.9
Q ss_pred CCCeEEEeCC-C--CHhHHHHhhcCCcEEEecCCCHhHHHhhcC-----CCeEEEEcC------CCCCCHHHHHhcCCcc
Q 006212 89 PKPTILVSEK-L--GEAGLAILRSFGNVECLYDLSPEALCEKIS-----QCDALIVRS------GTKVTRSVFEAANGKL 154 (656)
Q Consensus 89 ~~~~ilv~~~-l--~~~~~~~l~~~~~v~~~~~~~~eel~~~i~-----~~d~liv~~------~~~v~~e~l~~~~~~L 154 (656)
.||+||++++ + .+..++.|++.+++......+++++.+.++ ++|++++++ .+++++++|++++++|
T Consensus 2 ~~~~vl~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~L 81 (348)
T 2w2k_A 2 PRPRVLLLGDPARHLDDLWSDFQQKFEVIPANLTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHLPSSL 81 (348)
T ss_dssp CCCEEEECSSCCSSCHHHHHHHHHHSEEEECCCCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTSCTTC
T ss_pred CCcEEEEECCccccChHHHHHHHhcceEEecCCCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhcccCc
Confidence 3689999998 5 356778887767776655568899988887 899988752 3579999999885469
Q ss_pred eeEEecccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccc---ccccc----cccccc
Q 006212 155 KVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGK---WLRSK----YVGVSL 227 (656)
Q Consensus 155 K~I~~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~---W~~~~----~~g~~l 227 (656)
|+|+++|+|+||||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|+ |.+.. ..|.+|
T Consensus 82 k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l 161 (348)
T 2w2k_A 82 KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNP 161 (348)
T ss_dssp CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCS
T ss_pred eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999 94321 357899
Q ss_pred CCCEEEEEecChhHHHHHHHHh-cCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHH
Q 006212 228 VGKTLAVMGFGKVGSEVARRAK-GLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDE 304 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk-~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~ 304 (656)
+|+||||||+|.||+.+|++++ +|||+|++||++. ..+.+.+.|+..+ ++++++++||+|++|+|.+++|+++++++
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~ 241 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEA 241 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHH
Confidence 9999999999999999999999 9999999999986 4455566788777 89999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHH
Q 006212 305 TFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEI 384 (656)
Q Consensus 305 ~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~ 384 (656)
.++.||+|++|||++||+++|+++|.++|++|+|+||++|||+.|| +.+++||+++|||+|||+|+.|.|++.++...+
T Consensus 242 ~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP-~~~~~L~~~~nviltPH~~~~t~e~~~~~~~~~ 320 (348)
T 2w2k_A 242 FFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEP-QVSKELIEMKHVTLTTHIGGVAIETFHEFERLT 320 (348)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTT-SCCHHHHTSSSEEECCSCTTCSHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCC-CCCchhhcCCCEEEcCcCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 567899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccccCCCCChh
Q 006212 385 AEAVVGALRGELSATAINAPMVPSE 409 (656)
Q Consensus 385 ~~~i~~~l~g~~~~~~Vn~p~~~~~ 409 (656)
++|+.+|++|+.+.+.||.+.+.++
T Consensus 321 ~~ni~~~~~g~~~~~~v~~~~~~~~ 345 (348)
T 2w2k_A 321 MTNIDRFLLQGKPLLTPAGKVFAPS 345 (348)
T ss_dssp HHHHHHHHHTCCCCSSBCSCCCCCC
T ss_pred HHHHHHHHcCCCCcceecccccCcc
Confidence 9999999999999999999877654
No 25
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=1e-59 Score=510.94 Aligned_cols=297 Identities=26% Similarity=0.371 Sum_probs=271.3
Q ss_pred HHhhcCC-cEEEecC--CCHhHHHhhcCCCeEEEEcC--CCCCCHHHHHhcCCcceeEEecccccCccchhhHHhcCcee
Q 006212 105 AILRSFG-NVECLYD--LSPEALCEKISQCDALIVRS--GTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLV 179 (656)
Q Consensus 105 ~~l~~~~-~v~~~~~--~~~eel~~~i~~~d~liv~~--~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~aa~~~GI~V 179 (656)
+.|++.+ ++.+... .+++++.+.+.++|+++++. .+++++++|+++ |+||+|+++|+|+||||+++|+++||.|
T Consensus 61 ~~l~~~g~~v~~~~~~~~~~~~l~~~l~~ad~li~~~~~~~~i~~~~l~~~-p~Lk~I~~~g~G~d~iD~~aa~~~gI~V 139 (393)
T 2nac_A 61 KYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKA-KNLKLALTAGIGSDHVDLQSAIDRNVTV 139 (393)
T ss_dssp HHHHHTTCEEEEESCCSSTTSHHHHHHTTCSEEEEBTTBCCCBCHHHHHHC-TTCCEEEESSSCCTTBCHHHHHHTTCEE
T ss_pred HHHHhCCCEEEEecCCCCCHHHHHHhccCCCEEEEcCccCCCCCHHHHhhC-CCCcEEEEcCccccccCHHHHhcCCEEE
Confidence 4666654 5655332 34567889999999999874 357999999998 5999999999999999999999999999
Q ss_pred ecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc--ccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE
Q 006212 180 VNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK--YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (656)
Q Consensus 180 ~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~--~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~ 257 (656)
+|+|++|+.+||||++++||+++|++.++++.+++|+|.... ..+.+|+||||||||+|+||+.+|+++++|||+|++
T Consensus 140 ~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~ 219 (393)
T 2nac_A 140 AEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHY 219 (393)
T ss_dssp EECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEE
T ss_pred EeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEE
Confidence 999999999999999999999999999999999999997532 246899999999999999999999999999999999
Q ss_pred ECCCC-ChhHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 258 HDPYA-PADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 258 ~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
||++. ..+.+.+.|+.. .++++++++||+|++|+|++++|+++++++.|+.||+|++|||++||+++|+++|+++|++
T Consensus 220 ~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 220 TDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp ECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred EcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 99986 455566778876 4899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 006212 336 GVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (656)
Q Consensus 336 g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn 402 (656)
|+|+||++|||+.||++.++|||++||+++|||+|+.|.|+++++...+++|+.+|++|+++.+.++
T Consensus 300 g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~ 366 (393)
T 2nac_A 300 GRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGTTLTAQARYAAGTREILECFFEGRPIRDEYL 366 (393)
T ss_dssp TSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCGGGE
T ss_pred CCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcCcHHHHHHHHHHHHHHHHHHHcCCCCcceeE
Confidence 9999999999999999889999999999999999999999999999999999999999998888665
No 26
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.7e-59 Score=499.22 Aligned_cols=312 Identities=31% Similarity=0.502 Sum_probs=289.4
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccch
Q 006212 90 KPTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDL 169 (656)
Q Consensus 90 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~ 169 (656)
|+|||+++.+.+..++.|++.+++++....+.+++.+.+.++|++++++.+++++++++++ |+||+|+++|+|+||||+
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~ 80 (333)
T 2d0i_A 2 RPKVGVLLKMKREALEELKKYADVEIILYPSGEELKGVIGRFDGIIVSPTTKITREVLENA-ERLKVISCHSAGYDNIDL 80 (333)
T ss_dssp CSEEEECSCCCHHHHHHHHTTSEEEECCSCCHHHHHHHGGGCSEEEECTTSCBCHHHHTTC-TTCCEEEESSSCCTTBCH
T ss_pred CcEEEEECCCCHHHHHHHHhcCCEEEeCCCCHHHHHHHhcCCEEEEECCCCCCCHHHHhhC-CCceEEEECCcccccccH
Confidence 5789999999999999998876766543357889999999999999888788999999988 599999999999999999
Q ss_pred hhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc--cccc----cccCCCEEEEEecChhHHH
Q 006212 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS--KYVG----VSLVGKTLAVMGFGKVGSE 243 (656)
Q Consensus 170 ~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~--~~~g----~~l~gktvGIIGlG~IG~~ 243 (656)
++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+. ...| .+|.|+||||||+|.||+.
T Consensus 81 ~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g~~vgIIG~G~iG~~ 160 (333)
T 2d0i_A 81 EEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKA 160 (333)
T ss_dssp HHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTTCEEEEECCSHHHHH
T ss_pred HHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCcCEEEEEccCHHHHH
Confidence 999999999999999999999999999999999999999999999999642 2346 7999999999999999999
Q ss_pred HHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 244 VARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 244 vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
+|++++++||+|++||++...+.+.+.|+...++++++++||+|++|+|.+++|+++++++.++.||+| +|||++||.+
T Consensus 161 vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~ 239 (333)
T 2d0i_A 161 IARRLIPFGVKLYYWSRHRKVNVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGAL 239 (333)
T ss_dssp HHHHHGGGTCEEEEECSSCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGG
T ss_pred HHHHHHHCCCEEEEECCCcchhhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcc
Confidence 999999999999999998765555667877779999999999999999999999999999899999999 9999999999
Q ss_pred hcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCC-cEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 006212 324 IDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHE-NVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (656)
Q Consensus 324 vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~-nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn 402 (656)
+|+++|.++|++++|+|||+|||+.||++ ++|||+++ |||+|||+++.|.|+++++...+++|+.+|++|+++.+.||
T Consensus 240 vd~~aL~~aL~~~~i~gaglDv~~~EP~~-~~~L~~~~~nviltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~~v~ 318 (333)
T 2d0i_A 240 VDEKAVTEAIKQGKLKGYATDVFEKEPVR-EHELFKYEWETVLTPHYAGLALEAQEDVGFRAVENLLKVLRGEVPEDLVN 318 (333)
T ss_dssp BCHHHHHHHHHTTCBCEEEESCCSSSSCS-CCGGGGCTTTEEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred cCHHHHHHHHHcCCceEEEecCCCCCCCC-CchHHcCCCCEEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcCccC
Confidence 99999999999999999999999999987 89999999 99999999999999999999999999999999999999998
Q ss_pred CC
Q 006212 403 AP 404 (656)
Q Consensus 403 ~p 404 (656)
..
T Consensus 319 ~~ 320 (333)
T 2d0i_A 319 KE 320 (333)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 27
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=3.5e-59 Score=497.95 Aligned_cols=309 Identities=25% Similarity=0.352 Sum_probs=281.5
Q ss_pred CCCCeEEEeCCCCHhHHHHhhcCCcEEEec-CCCHhH-HHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006212 88 TPKPTILVSEKLGEAGLAILRSFGNVECLY-DLSPEA-LCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (656)
Q Consensus 88 ~~~~~ilv~~~l~~~~~~~l~~~~~v~~~~-~~~~ee-l~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD 165 (656)
|.|++||+++++.+..++.|++.+++.... ..+.++ +.+.++++|++++++.+++++++++++ |+||+|+++|+|+|
T Consensus 21 m~~~~vl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~l~~~-p~Lk~I~~~~~G~d 99 (333)
T 3ba1_A 21 MEAIGVLMMCPMSTYLEQELDKRFKLFRYWTQPAQRDFLALQAESIRAVVGNSNAGADAELIDAL-PKLEIVSSFSVGLD 99 (333)
T ss_dssp -CCCEEEECSCCCHHHHHHHHHHSEEEEGGGCSSHHHHHHHHTTTEEEEEECSSSCBCHHHHHHC-TTCCEEEESSSCCT
T ss_pred CCCCEEEEeCCCCHHHHHHHHhcCCEEEecCCCChHHHHHHHhCCCEEEEEcCCCCCCHHHHhhC-CCCcEEEEcCcccc
Confidence 457899999999999999998766766543 234444 667789999999987778999999998 59999999999999
Q ss_pred ccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc-ccccccCCCEEEEEecChhHHHH
Q 006212 166 NVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK-YVGVSLVGKTLAVMGFGKVGSEV 244 (656)
Q Consensus 166 ~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~-~~g~~l~gktvGIIGlG~IG~~v 244 (656)
|||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|.+.. ..|.+++||||||||+|.||+.+
T Consensus 100 ~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgIIG~G~iG~~v 179 (333)
T 3ba1_A 100 KVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSGKRVGIIGLGRIGLAV 179 (333)
T ss_dssp TBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTTCCEEEECCSHHHHHH
T ss_pred ccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCCCEEEEECCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999997533 35789999999999999999999
Q ss_pred HHHHhcCCCEEEEECCCCChhHHHHcCCe-ecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 245 ARRAKGLGMNVIAHDPYAPADKARAVGVE-LVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 245 A~~lk~~G~~Vi~~d~~~~~~~a~~~g~~-~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
|++++++||+|++||++.... .|+. ..++++++++||+|++|+|.+++|+++++++.++.||+|++|||++||.+
T Consensus 180 A~~l~~~G~~V~~~dr~~~~~----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~ 255 (333)
T 3ba1_A 180 AERAEAFDCPISYFSRSKKPN----TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPH 255 (333)
T ss_dssp HHHHHTTTCCEEEECSSCCTT----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGG
T ss_pred HHHHHHCCCEEEEECCCchhc----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCch
Confidence 999999999999999886322 2554 45899999999999999999999999999999999999999999999999
Q ss_pred hcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 006212 324 IDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (656)
Q Consensus 324 vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn 402 (656)
+|+++|.++|++|+++||++|||+.||++. +|||+++|||+|||+|+.|.|+++++...+++|+.+|++|+++.+.||
T Consensus 256 vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~-~~L~~~~nviltPH~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 256 VDEPELVSALVEGRLGGAGLDVFEREPEVP-EKLFGLENVVLLPHVGSGTVETRKVMADLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp BCHHHHHHHHHHTSSCEEEESCCTTTTCCC-GGGGGCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCSSBCC
T ss_pred hCHHHHHHHHHcCCCeEEEEecCCCCCCCc-chhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999999999999765 899999999999999999999999999999999999999999888876
No 28
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=7.8e-59 Score=497.71 Aligned_cols=317 Identities=29% Similarity=0.477 Sum_probs=279.6
Q ss_pred ccCCCCCeEEEeCCCC-HhHHHHhhcCCcEEEecCCCHhHHHhhc-CCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccc
Q 006212 85 QAVTPKPTILVSEKLG-EAGLAILRSFGNVECLYDLSPEALCEKI-SQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGV 162 (656)
Q Consensus 85 ~~~~~~~~ilv~~~l~-~~~~~~l~~~~~v~~~~~~~~eel~~~i-~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~ 162 (656)
+.++.||+|++.+... +...+.++...++......+.+|+.+.+ .++|+++++..+++++++++++ |+||+|+++|+
T Consensus 16 ~~~~~kp~i~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~ 94 (347)
T 1mx3_A 16 PRGSHMPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTREDLEKF-KALRIIVRIGS 94 (347)
T ss_dssp -----CCEEEESSCSCCTTTHHHHTTTCEEEECCCSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTC-SSCCEEEESSS
T ss_pred CCCCCCCEEEEEcCCcchhhHHHhhccceEEecCCCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhC-CCCCEEEEccc
Confidence 3445689999987532 2236777776777766556777777764 7899988887778999999998 59999999999
Q ss_pred ccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc------ccc-cccCCCEEEEE
Q 006212 163 GIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK------YVG-VSLVGKTLAVM 235 (656)
Q Consensus 163 GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~------~~g-~~l~gktvGII 235 (656)
||||||+++|+++||.|+|+||+++.+||||++++||+++|+++.+++.+++|+|.... ..| .+++|+|||||
T Consensus 95 G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~l~g~tvGII 174 (347)
T 1mx3_A 95 GFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGII 174 (347)
T ss_dssp CCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEE
T ss_pred ccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccCccCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999996421 113 68999999999
Q ss_pred ecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcE
Q 006212 236 GFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVR 314 (656)
Q Consensus 236 GlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gai 314 (656)
|+|.||+.+|+++++|||+|++||++.....+...|+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++
T Consensus 175 G~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gai 254 (347)
T 1mx3_A 175 GLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAF 254 (347)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEE
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCE
Confidence 9999999999999999999999999875445566787665 899999999999999999999999999999999999999
Q ss_pred EEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCC-CCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 006212 315 IVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPA-KDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALR 393 (656)
Q Consensus 315 lINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~-~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~ 393 (656)
|||++||+++|+++|+++|++|+|+||++|||+.||++ .++||+.++|+++|||+++.|.++++++...+++|+.+|++
T Consensus 255 lIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~~ni~~~~~ 334 (347)
T 1mx3_A 255 LVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAIT 334 (347)
T ss_dssp EEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999976 46899999999999999999999999999999999999999
Q ss_pred CCCCC---cccc
Q 006212 394 GELSA---TAIN 402 (656)
Q Consensus 394 g~~~~---~~Vn 402 (656)
|+.+. ++||
T Consensus 335 g~~~~~l~~~v~ 346 (347)
T 1mx3_A 335 GRIPDSLKNCVN 346 (347)
T ss_dssp SCTTTTCSSBCC
T ss_pred CCCCcccCCCCC
Confidence 98765 5554
No 29
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=2.7e-58 Score=491.75 Aligned_cols=312 Identities=35% Similarity=0.602 Sum_probs=288.5
Q ss_pred CCeEEEeCCCCHhHHHHhhcCCcEEEecC---CCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006212 90 KPTILVSEKLGEAGLAILRSFGNVECLYD---LSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (656)
Q Consensus 90 ~~~ilv~~~l~~~~~~~l~~~~~v~~~~~---~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~ 166 (656)
|++||+++.+.+..++.|++.+++.+... .+++++.+.+.++|++++++.+++++++++++ |+||||++.|+|+||
T Consensus 2 ~~~il~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~ 80 (334)
T 2dbq_A 2 KPKVFITREIPEVGIKMLEDEFEVEVWGDEKEIPREILLKKVKEVDALVTMLSERIDKEVFENA-PKLRIVANYAVGYDN 80 (334)
T ss_dssp CCEEEESSCCCHHHHHHHHTTSEEEECCCSSCCCHHHHHHHTTSCSEEEECTTSCBCHHHHHTC-TTCCEEEESSSCCTT
T ss_pred CcEEEEecCCCHHHHHHHHhcCCEEEecCCCCCCHHHHHHHhcCcEEEEEcCCCCCCHHHHhhC-CCceEEEECCccccc
Confidence 46899999999988998887767765432 47889999999999999987778999999988 599999999999999
Q ss_pred cchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccc----c---ccccccccCCCEEEEEecCh
Q 006212 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWL----R---SKYVGVSLVGKTLAVMGFGK 239 (656)
Q Consensus 167 iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~----~---~~~~g~~l~gktvGIIGlG~ 239 (656)
||+++|+++||.|+|+||+|+.+||||++++||+++|+++++++.+++|.|. . ..+.|.++.|+||||||+|.
T Consensus 81 id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgIIG~G~ 160 (334)
T 2dbq_A 81 IDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGR 160 (334)
T ss_dssp BCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEEECCSH
T ss_pred ccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEEEccCH
Confidence 9999999999999999999999999999999999999999999999999996 2 12347899999999999999
Q ss_pred hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 240 VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 240 IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
||+.+|++++++||+|++||++...+.+...|+...++++++++||+|++|+|.+++|+++++++.+..||+|++|||++
T Consensus 161 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~s 240 (334)
T 2dbq_A 161 IGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIA 240 (334)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCHHHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHhCCCEEEEECCCcchhhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 99999999999999999999987555555678877799999999999999999999999999999999999999999999
Q ss_pred CCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 006212 320 RGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (656)
Q Consensus 320 Rg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (656)
||.++|+++|.++|++|+++||++|||+.|| +.++|||+++|||+|||+|+.|.++.+++...+++|+.+|++|+++.+
T Consensus 241 rg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP-~~~~~L~~~~~vi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~ 319 (334)
T 2dbq_A 241 RGKVVDTNALVKALKEGWIAGAGLDVFEEEP-YYNEELFKLDNVVLTPHIGSASFGAREGMAELVAKNLIAFKRGEIPPT 319 (334)
T ss_dssp CGGGBCHHHHHHHHHHTSSSEEEESCCSSSS-CCCHHHHHCTTEEECSSCTTCSHHHHHHHHHHHHHHHHHHHTTCCCTT
T ss_pred CCcccCHHHHHHHHHhCCeeEEEecCCCCCC-CCCchhhcCCCEEECCccCCCcHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 9999999999999999999999999999999 678999999999999999999999999999999999999999999999
Q ss_pred cccC
Q 006212 400 AINA 403 (656)
Q Consensus 400 ~Vn~ 403 (656)
.||+
T Consensus 320 ~v~~ 323 (334)
T 2dbq_A 320 LVNR 323 (334)
T ss_dssp BSCT
T ss_pred ccCH
Confidence 8883
No 30
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=5.7e-58 Score=488.45 Aligned_cols=315 Identities=27% Similarity=0.442 Sum_probs=288.9
Q ss_pred CCCeEEEeCCCCHhHHHHhhcC--CcEEEec---CCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccc
Q 006212 89 PKPTILVSEKLGEAGLAILRSF--GNVECLY---DLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVG 163 (656)
Q Consensus 89 ~~~~ilv~~~l~~~~~~~l~~~--~~v~~~~---~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~G 163 (656)
+|++||+++.+.+...+.|++. .++.... ..+++++.+.++++|++++++.++++++++++++|+||+|++.|+|
T Consensus 7 ~~~~il~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~Lk~I~~~~~G 86 (330)
T 2gcg_A 7 RLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVG 86 (330)
T ss_dssp CCEEEEESSCCCHHHHHHHHHCTTEEEEECCSSSCCCHHHHHHHHTTCSEEEECTTSCBCHHHHHHHCTTCCEEEESSSC
T ss_pred CCCEEEEECCCCHHHHHHHHhcCCceEEEecCCCCCCHHHHHHHhcCCeEEEECCCCCCCHHHHHhcCCCceEEEECCcc
Confidence 4678999999998889988876 4555432 2467899999999999999877789999999874599999999999
Q ss_pred cCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc---cccccccCCCEEEEEecChh
Q 006212 164 IDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS---KYVGVSLVGKTLAVMGFGKV 240 (656)
Q Consensus 164 vD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~---~~~g~~l~gktvGIIGlG~I 240 (656)
+||||+++|+++||.|+|+||+++.+||||++++||+++|+++++++.+++|+|.+. .+.|.++.|+||||||+|.|
T Consensus 87 ~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vgIIG~G~i 166 (330)
T 2gcg_A 87 IDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRI 166 (330)
T ss_dssp CTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEEEECCSHH
T ss_pred cccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEEEECcCHH
Confidence 999999999999999999999999999999999999999999999999999999742 23578999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 241 GSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 241 G~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
|+.+|++++++||+|++||++. ..+.+...|+..+++++++++||+|++|+|.+++|+++++++.++.||+|++|||++
T Consensus 167 G~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~s 246 (330)
T 2gcg_A 167 GQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINIS 246 (330)
T ss_dssp HHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred HHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 9999999999999999999876 445555667777799999999999999999999999999999999999999999999
Q ss_pred CCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 006212 320 RGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (656)
Q Consensus 320 Rg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (656)
||+++|+++|.++|+++++.||++|||+.||++.++|||+++|+++|||+|+.|.|+++++...+++|+.+|++|+++.+
T Consensus 247 rg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~~~~~~~~~~~n~~~~~~g~~~~~ 326 (330)
T 2gcg_A 247 RGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPS 326 (330)
T ss_dssp CGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHHHHHHHHHHHHHHHHHHHTCCCTT
T ss_pred CCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999998889999999999999999999999999999999999999999999888
Q ss_pred cccC
Q 006212 400 AINA 403 (656)
Q Consensus 400 ~Vn~ 403 (656)
.||.
T Consensus 327 ~v~~ 330 (330)
T 2gcg_A 327 ELKL 330 (330)
T ss_dssp EECC
T ss_pred CCCC
Confidence 8873
No 31
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=2.2e-58 Score=488.19 Aligned_cols=296 Identities=21% Similarity=0.258 Sum_probs=259.5
Q ss_pred CCeEEEeCCCC--HhHHHHhhcC-CcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006212 90 KPTILVSEKLG--EAGLAILRSF-GNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (656)
Q Consensus 90 ~~~ilv~~~l~--~~~~~~l~~~-~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~ 166 (656)
.+||+++.+.. +...+.|++. .++++... +.+ ...++|+++++. ++++++++ |+||+|++.|+||||
T Consensus 3 ~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~-~~~----~~~~ad~~i~~~---~~~~~l~~--~~Lk~I~~~~aG~d~ 72 (315)
T 3pp8_A 3 AMEIIFYHPTFNAAWWVNALEKALPHARVREW-KVG----DNNPADYALVWQ---PPVEMLAG--RRLKAVFVLGAGVDA 72 (315)
T ss_dssp CEEEEEECSSSCHHHHHHHHHHHSTTEEEEEC-CTT----CCSCCSEEEESS---CCHHHHTT--CCCSEEEESSSCCHH
T ss_pred ceEEEEEcCCCchHHHHHHHHHHCCCCEEEec-CCC----CccCcEEEEECC---CCHHHhCC--CCceEEEECCEeccc
Confidence 36899887765 4455666554 46665432 111 356999999874 57999987 599999999999999
Q ss_pred c-c-hhh---HHhcCceeecCCCCC-hhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChh
Q 006212 167 V-D-LQA---ATEFGCLVVNAPIAN-TVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKV 240 (656)
Q Consensus 167 i-D-~~a---a~~~GI~V~n~p~~n-~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~I 240 (656)
| | +++ |.++||.|+|+|+++ +.+||||++++||+++|+++++++.+++|+|.+. .+.+++||||||||+|.|
T Consensus 73 i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~--~~~~l~g~tvGIiG~G~I 150 (315)
T 3pp8_A 73 ILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL--PEYTREEFSVGIMGAGVL 150 (315)
T ss_dssp HHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC--CCCCSTTCCEEEECCSHH
T ss_pred ccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC--CCCCcCCCEEEEEeeCHH
Confidence 9 7 887 789999999999864 7999999999999999999999999999999864 578999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCCChhHHHHcCCe----ecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEE
Q 006212 241 GSEVARRAKGLGMNVIAHDPYAPADKARAVGVE----LVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIV 316 (656)
Q Consensus 241 G~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~----~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailI 316 (656)
|+.+|+++++|||+|++||++.... .++. ..++++++++||+|++|+|++++|+++++++.|+.||+|++||
T Consensus 151 G~~vA~~l~~~G~~V~~~dr~~~~~----~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailI 226 (315)
T 3pp8_A 151 GAKVAESLQAWGFPLRCWSRSRKSW----PGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVL 226 (315)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCCCC----TTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhh----hhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEE
Confidence 9999999999999999999875321 1222 1479999999999999999999999999999999999999999
Q ss_pred EcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 006212 317 NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGEL 396 (656)
Q Consensus 317 NvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~ 396 (656)
|+|||+++|+++|+++|++|+|+||+||||+.||++.++|||++||+++|||+|++|.+ +++...+++|+.+|++|++
T Consensus 227 N~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~~~~~~~~~ni~~~~~G~~ 304 (315)
T 3pp8_A 227 NLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAVTRP--AEAIDYISRTITQLEKGEP 304 (315)
T ss_dssp ECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSCCCH--HHHHHHHHHHHHHHHHTCC
T ss_pred ECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcccHH--HHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999986 5788999999999999999
Q ss_pred CCccccC
Q 006212 397 SATAINA 403 (656)
Q Consensus 397 ~~~~Vn~ 403 (656)
+.+.||.
T Consensus 305 ~~~~V~~ 311 (315)
T 3pp8_A 305 VTGQVDR 311 (315)
T ss_dssp CCCBCCC
T ss_pred CCceECc
Confidence 9999985
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.5e-57 Score=476.09 Aligned_cols=293 Identities=22% Similarity=0.268 Sum_probs=265.7
Q ss_pred eEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccchhh
Q 006212 92 TILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQA 171 (656)
Q Consensus 92 ~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~a 171 (656)
|||+++++++..++.|++.. .++. .+.+.++|+++++. .+.++++++ |+||+|+++|+|+||||+++
T Consensus 2 ~il~~~~~~~~~~~~l~~~~-~~v~--------~~~~~~~d~~i~~~---~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~ 68 (303)
T 1qp8_A 2 ELYVNFELPPEAEEELRKYF-KIVR--------GGDLGNVEAALVSR---ITAEELAKM-PRLKFIQVVTAGLDHLPWES 68 (303)
T ss_dssp EEECCSCCCHHHHHHHHTTC-EEEC--------SSCCTTBCCCCBSC---CCHHHHHHC-TTCCCEEBSSSCCTTSCCTT
T ss_pred EEEEccCCCHHHHHHHHhcC-Cccc--------hhhhCCCEEEEECC---CCHHHHhhC-CCCcEEEECCcCcccccHHH
Confidence 79999999999999887752 2221 25678999999765 457999988 59999999999999999998
Q ss_pred HHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcC
Q 006212 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGL 251 (656)
Q Consensus 172 a~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~ 251 (656)
+ ++||.|+|+||+++.+||||++++||+++|+++++++.+++|.|.+. ..+.++.||||||||+|+||+++|+++++|
T Consensus 69 ~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~-~~~~~l~g~~vgIIG~G~IG~~~A~~l~~~ 146 (303)
T 1qp8_A 69 I-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRD-VEIPLIQGEKVAVLGLGEIGTRVGKILAAL 146 (303)
T ss_dssp S-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-SCCCCCTTCEEEEESCSTHHHHHHHHHHHT
T ss_pred H-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCC-CCCCCCCCCEEEEEccCHHHHHHHHHHHHC
Confidence 5 79999999999999999999999999999999999999999999753 234589999999999999999999999999
Q ss_pred CCEEEEECCCCChhHHHHcCC-eecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHH
Q 006212 252 GMNVIAHDPYAPADKARAVGV-ELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALV 330 (656)
Q Consensus 252 G~~Vi~~d~~~~~~~a~~~g~-~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~ 330 (656)
||+|++||++.. +. +. ...++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+++|.
T Consensus 147 G~~V~~~dr~~~-~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~ 221 (303)
T 1qp8_A 147 GAQVRGFSRTPK-EG----PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVL 221 (303)
T ss_dssp TCEEEEECSSCC-CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHH
T ss_pred CCEEEEECCCcc-cc----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHH
Confidence 999999998865 21 33 3458999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhcCCeEEEEeecc-CCCCCCCCCccccCCcEEEcCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCccccCC
Q 006212 331 RALDSGVVAQAALDVF-TEEPPAKDSKLVQHENVTVTPHLGAS--TKEAQEGVAIEIAEAVVGALRGELSATAINAP 404 (656)
Q Consensus 331 ~aL~~g~i~gA~lDV~-~~EP~~~~~~L~~~~nvilTPH~g~~--T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn~p 404 (656)
++|++|+|+||++||| +.||+++++|||+++|+|+|||+++. |.|+++++...+++|+.+|++|+++.+.||..
T Consensus 222 ~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~~~ 298 (303)
T 1qp8_A 222 RILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQMVMEAVRNLITYATGGRPRNIAKRE 298 (303)
T ss_dssp HHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHHHHHHHHHHHHHHHTTSCCSCBCCGG
T ss_pred HHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCCceeCHH
Confidence 9999999999999999 88998889999999999999999998 99999999999999999999999999988843
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=1.6e-55 Score=474.92 Aligned_cols=279 Identities=28% Similarity=0.422 Sum_probs=249.6
Q ss_pred CCCeEEEeCCCCHhHHHHhhcCCcEEEecC--CCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCc
Q 006212 89 PKPTILVSEKLGEAGLAILRSFGNVECLYD--LSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDN 166 (656)
Q Consensus 89 ~~~~ilv~~~l~~~~~~~l~~~~~v~~~~~--~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~ 166 (656)
.|+|||+.+.++ ...+.+++.+++.+... ++.+ .+.++|++++++.+++++++++ + ++||+|+++|+|+||
T Consensus 2 ~mmkIl~~~~~p-~~~~~~~~~~~v~~~~~~~~~~~----~l~~ad~li~~~~~~v~~~ll~-~-~~Lk~I~~~~~G~D~ 74 (381)
T 3oet_A 2 NAMKILVDENMP-YARELFSRLGEVKAVPGRPIPVE----ELNHADALMVRSVTKVNESLLS-G-TPINFVGTATAGTDH 74 (381)
T ss_dssp CCCEEEEETTST-THHHHHTTSSEEEEECC---CHH----HHTTCSEEEECTTSCBSHHHHT-T-SCCCEEEESSSCCTT
T ss_pred CceEEEECCCCc-HHHHHHhhCCcEEEeCCCCCCHH----HHCCCEEEEECCCCCCCHHHHc-C-CCCEEEEEccccccc
Confidence 357999998875 45788888888776432 2333 4789999999988899999998 4 369999999999999
Q ss_pred cchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHH
Q 006212 167 VDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVAR 246 (656)
Q Consensus 167 iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~ 246 (656)
||+++|+++||.|+|+||+|+.+||||++++||+++|+. |.+|+||||||||+|+||+++|+
T Consensus 75 iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~------------------g~~l~gktvGIIGlG~IG~~vA~ 136 (381)
T 3oet_A 75 VDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD------------------GFSLRDRTIGIVGVGNVGSRLQT 136 (381)
T ss_dssp BCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT------------------TCCGGGCEEEEECCSHHHHHHHH
T ss_pred cCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc------------------CCccCCCEEEEEeECHHHHHHHH
Confidence 999999999999999999999999999999999999852 56899999999999999999999
Q ss_pred HHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCcc----ccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 247 RAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPT----TSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 247 ~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~----T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
++++|||+|++|||+.. ....+....++++++++||+|++|+|++++ |+++++++.|+.||+|++|||+|||+
T Consensus 137 ~l~a~G~~V~~~d~~~~---~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~ 213 (381)
T 3oet_A 137 RLEALGIRTLLCDPPRA---ARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGP 213 (381)
T ss_dssp HHHHTTCEEEEECHHHH---HTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGG
T ss_pred HHHHCCCEEEEECCChH---HhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCc
Confidence 99999999999998531 112455677999999999999999999999 99999999999999999999999999
Q ss_pred hhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006212 323 VIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELS 397 (656)
Q Consensus 323 ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (656)
++|+++|+++|++|+++||+||||+.||++ +++||.++ +++|||+|++|.|++.++...+++|+.+|+++...
T Consensus 214 vvde~aL~~aL~~g~i~gA~LDV~e~EP~~-~~~L~~~~-~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~~~~ 286 (381)
T 3oet_A 214 VVDNAALLARLNAGQPLSVVLDVWEGEPDL-NVALLEAV-DIGTSHIAGYTLEGKARGTTQVFEAYSAFIGREQR 286 (381)
T ss_dssp GBCHHHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHHHS-SEECSSCTTCCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ccCHHHHHHHHHhCCCeEEEeeccccCCCC-cchhhhCC-EEECCccCcCcHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 999999999999999999999999999986 56799775 78999999999999999999999999999987654
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.3e-55 Score=455.19 Aligned_cols=278 Identities=26% Similarity=0.360 Sum_probs=240.7
Q ss_pred eEEEeCCCC----HhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCcc
Q 006212 92 TILVSEKLG----EAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNV 167 (656)
Q Consensus 92 ~ilv~~~l~----~~~~~~l~~~~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~i 167 (656)
+|++..++. +.+.+.|+.+. +.+ .+.+.++|++|+ +.+++ ++ |+||+|+++|+|+|||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~---------~~~~~~ad~li~-~~~~~------~~-~~Lk~I~~~~~G~d~i 63 (290)
T 3gvx_A 2 DVYVNFPADGHVREIAKTVLDGFD-LHW---------YPDYYDAEAQVI-KDRYV------LG-KRTKMIQAISAGVDHI 63 (290)
T ss_dssp CEEECSCCCHHHHHHHHHHTTTSC-EEE---------TTSCCCCSEEEE-SSCCC------CC-SSCCEEEECSSCCTTS
T ss_pred ceEEecCCcchHHHHHHHHhcccc-ccc---------Ccchhhhhhhhh-hhhhh------hh-hhhHHHHHHhcCCcee
Confidence 455556654 44455555442 222 166899999998 33443 45 6999999999999999
Q ss_pred chhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHH
Q 006212 168 DLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARR 247 (656)
Q Consensus 168 D~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~ 247 (656)
|+++|+++||.+.| +|.|+.+||||++++||+++|+++.+++.+++|+|.+.. ..+|+||||||||+|.||+++|++
T Consensus 64 d~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~--~~~l~g~tvGIIGlG~IG~~vA~~ 140 (290)
T 3gvx_A 64 DVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSP--TTLLYGKALGILGYGGIGRRVAHL 140 (290)
T ss_dssp CGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCC--CCCCTTCEEEEECCSHHHHHHHHH
T ss_pred ecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCC--ceeeecchheeeccCchhHHHHHH
Confidence 99999997766555 689999999999999999999999999999999998753 378999999999999999999999
Q ss_pred HhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006212 248 AKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (656)
Q Consensus 248 lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde 326 (656)
+++|||+|++||++..... .+..+ ++++++++||+|++|+|++++|+++++++.|+.||+|++|||+|||+++|+
T Consensus 141 l~~~G~~V~~~dr~~~~~~----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~ 216 (290)
T 3gvx_A 141 AKAFGMRVIAYTRSSVDQN----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSK 216 (290)
T ss_dssp HHHHTCEEEEECSSCCCTT----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCH
T ss_pred HHhhCcEEEEEeccccccc----cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCC
Confidence 9999999999999863221 14445 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCCC
Q 006212 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLG-ASTKEAQEGVAIEIAEAVVGALRGELS 397 (656)
Q Consensus 327 ~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g-~~T~ea~~~~~~~~~~~i~~~l~g~~~ 397 (656)
++|+++|++|++.||++|||+.||+ +|||++||+++|||+| ++|.|+++++...+++|+.+|++|+.-
T Consensus 217 ~aL~~aL~~g~i~ga~lDV~~~EP~---~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~~ 285 (290)
T 3gvx_A 217 PDMIGFLKERSDVWYLSDVWWNEPE---ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEGH 285 (290)
T ss_dssp HHHHHHHHHCTTCEEEESCCTTTTS---CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC----
T ss_pred cchhhhhhhccceEEeeccccCCcc---cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCCc
Confidence 9999999999999999999999986 8999999999999999 999999999999999999999999864
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.1e-52 Score=453.82 Aligned_cols=281 Identities=31% Similarity=0.444 Sum_probs=248.4
Q ss_pred CeEEEeCCCCHhHHHHhhcCCcEEEecCCCHhHHHhhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccchh
Q 006212 91 PTILVSEKLGEAGLAILRSFGNVECLYDLSPEALCEKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQ 170 (656)
Q Consensus 91 ~~ilv~~~l~~~~~~~l~~~~~v~~~~~~~~eel~~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~ 170 (656)
+||++.+.++. ..+.+++.+++.+... .+...+.+.++|++++++.+++++++++ + |+||+|+++|+|+||||++
T Consensus 1 mkil~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~~~l~~ad~li~~~~~~~~~~~l~-~-~~Lk~I~~~~~G~D~iD~~ 75 (380)
T 2o4c_A 1 MRILADENIPV-VDAFFADQGSIRRLPG--RAIDRAALAEVDVLLVRSVTEVSRAALA-G-SPVRFVGTCTIGTDHLDLD 75 (380)
T ss_dssp CEEEEETTCTT-HHHHHGGGSEEEEECG--GGCSTTTTTTCSEEEECTTSCBCHHHHT-T-SCCCEEEECSSCSTTBCHH
T ss_pred CEEEEecCchH-HHHHHHhCCcEEEecC--CcCChHHHCCcEEEEEcCCCCCCHHHhc-C-CCceEEEEcCcccchhhHH
Confidence 37888887754 4677777667665331 1112234689999999988899999998 6 6999999999999999999
Q ss_pred hHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhc
Q 006212 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKG 250 (656)
Q Consensus 171 aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~ 250 (656)
+|+++||.|+|+||+|+.+||||++++||+++|+ | |.++.|+||||||+|+||+++|+++++
T Consensus 76 ~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~------------~------~~~l~g~tvGIIGlG~IG~~vA~~l~~ 137 (380)
T 2o4c_A 76 YFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEV------------R------GADLAERTYGVVGAGQVGGRLVEVLRG 137 (380)
T ss_dssp HHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHH------------H------TCCGGGCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhh------------h------hcccCCCEEEEEeCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 2 468999999999999999999999999
Q ss_pred CCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCcc----ccccccHHHHhcCCCCcEEEEcCCCchhcH
Q 006212 251 LGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPT----TSKIFNDETFAKMKKGVRIVNVARGGVIDE 326 (656)
Q Consensus 251 ~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~----T~~li~~~~l~~mK~gailINvaRg~ivde 326 (656)
|||+|++|||+... ...|....++++++++||+|++|+|++++ |+++++++.|+.||+|++|||++||+++|+
T Consensus 138 ~G~~V~~~d~~~~~---~~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~ 214 (380)
T 2o4c_A 138 LGWKVLVCDPPRQA---REPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDN 214 (380)
T ss_dssp TTCEEEEECHHHHH---HSTTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCH
T ss_pred CCCEEEEEcCChhh---hccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCH
Confidence 99999999986421 13455667999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCc
Q 006212 327 EALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSAT 399 (656)
Q Consensus 327 ~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~ 399 (656)
++|+++|++|+|.||+||||+.||++ +++|+. +|+++|||+|++|.|++.++...+++|+.+|++|+...+
T Consensus 215 ~aL~~aL~~g~i~~A~LDV~~~EP~~-~~~l~~-~nvi~TPHiag~t~e~~~~~~~~~~~nl~~~l~g~~~~~ 285 (380)
T 2o4c_A 215 QALRRLLEGGADLEVALDVWEGEPQA-DPELAA-RCLIATPHIAGYSLEGKLRGTAQIYQAYCAWRGIAERVS 285 (380)
T ss_dssp HHHHHHHHTTCCEEEEESCCTTTTSC-CHHHHT-TCSEECSSCTTCCHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHHhCCCceEEeeeeccCCCC-chhhcc-CCEEEccccCcCCHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 99999999999999999999999964 678886 599999999999999999999999999999999986444
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.2e-37 Score=344.43 Aligned_cols=272 Identities=18% Similarity=0.183 Sum_probs=233.7
Q ss_pred CcceeEE-ecccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCC
Q 006212 152 GKLKVVG-RAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (656)
Q Consensus 152 ~~LK~I~-~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 230 (656)
++++.|+ .+++|+|++ ++|+++||.|+|+|++|. ++|| +++|++....+.++.| |.+ +.+.++.||
T Consensus 192 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r--~~~~~l~Gk 258 (479)
T 1v8b_A 192 KKIIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR--ATDFLISGK 258 (479)
T ss_dssp TTCCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH--HHCCCCTTS
T ss_pred cCeEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh--ccccccCCC
Confidence 4899998 889999998 899999999999999999 9999 4578999899999998 975 457899999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcC
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~m 309 (656)
||||||+|.||+.+|+++++|||+|++||++... ..+...|+...++++++++||+|++|+ .|+++++.+.|+.|
T Consensus 259 tVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 334 (479)
T 1v8b_A 259 IVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCT----GNVDVIKLEHLLKM 334 (479)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECC----SSSSSBCHHHHTTC
T ss_pred EEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECC----ChhhhcCHHHHhhc
Confidence 9999999999999999999999999999998643 345667888889999999999999995 68999999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHHHH--hHhcCCeEEEEeeccCCCCCCCCCccccC--CcEEEcCCCC-CCcHH-HHHHHHH
Q 006212 310 KKGVRIVNVARGGV-IDEEALVR--ALDSGVVAQAALDVFTEEPPAKDSKLVQH--ENVTVTPHLG-ASTKE-AQEGVAI 382 (656)
Q Consensus 310 K~gailINvaRg~i-vde~aL~~--aL~~g~i~gA~lDV~~~EP~~~~~~L~~~--~nvilTPH~g-~~T~e-a~~~~~~ 382 (656)
|+|++|||+|||++ ||+++|.+ +|++|+|. +++|||+. +.++||+.+ +|+++| |+| +.+.+ ++..++.
T Consensus 335 K~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~pl---p~~~~l~~l~~~nvv~t-H~atghp~e~~~~s~a~ 409 (479)
T 1v8b_A 335 KNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITL---PNGNKIIVLARGRLLNL-GCATGHPAFVMSFSFCN 409 (479)
T ss_dssp CTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEEC---TTSCEEEEEGGGSBHHH-HSSCCSCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEEC---CCCCeeeEecCCCEEEE-eccCCCCchhHHHHHHH
Confidence 99999999999999 99999999 99999998 99999843 457899988 999999 999 66766 7888999
Q ss_pred HHHHHHHHHHcCC--CCCccccCCCCChhhhhhccchHHHHHHHhHHHHHhhcCCCCceEEEEEEeecCCC
Q 006212 383 EIAEAVVGALRGE--LSATAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDP 451 (656)
Q Consensus 383 ~~~~~i~~~l~g~--~~~~~Vn~p~~~~~~~~~l~p~~~laerlG~l~~qL~~g~~~~k~i~i~~~Gs~a~ 451 (656)
++++|+..|++|+ .+.+.|+ .+|....+.+.+ +.| +++|....||..+ ..+.+.+.+.|.+.+
T Consensus 410 ~~~~ni~~~~~g~~~~l~n~V~--~lp~~~de~va~-l~L-~~lG~~l~~lt~~--q~~yi~v~~~g~~~~ 474 (479)
T 1v8b_A 410 QTFAQLDLWQNKDTNKYENKVY--LLPKHLDEKVAL-YHL-KKLNASLTELDDN--QCQFLGVNKSGPFKS 474 (479)
T ss_dssp HHHHHHHHHHTTTSSSCCSSEE--CCCHHHHHHHHH-HHH-GGGTCCCCCCCHH--HHHHHTCCTTSCCSC
T ss_pred HHHHHHHHHHcCCCCcCCcceE--eCChhhHHHHHH-HHH-HHcCChHhhcChh--hhhhEeeeeCCCCCc
Confidence 9999999999999 8888776 345555555665 355 6777777777666 566677777787763
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=7.8e-38 Score=347.10 Aligned_cols=271 Identities=17% Similarity=0.205 Sum_probs=229.4
Q ss_pred CcceeEE-ecccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCC
Q 006212 152 GKLKVVG-RAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (656)
Q Consensus 152 ~~LK~I~-~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 230 (656)
+++|.|+ .+++|+|++ ++|+++||.|+|+|++|. +|||+ ++|++....+.++.| |.+ ..|.++.||
T Consensus 212 ~~l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~-------l~r~~~~~~~~l~~g-w~~--~~g~~L~Gk 278 (494)
T 3d64_A 212 AHIKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKS-------KFDNLYGCRESLVDG-IKR--ATDVMIAGK 278 (494)
T ss_dssp TTCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------HHHHHHHHHTTHHHH-HHH--HHCCCCTTC
T ss_pred hCcEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHH-------HHhhhHhhhhhhhhh-hhh--ccccccCCC
Confidence 4899998 889999998 899999999999999999 99994 457887777777777 865 467899999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCCChh-HHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcC
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPAD-KARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~-~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~m 309 (656)
||||||+|.||+.+|+++++|||+|++||++.... .+...|+...++++++++||+|++|+ +|+++|+++.|+.|
T Consensus 279 tVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~----~t~~lI~~~~l~~M 354 (494)
T 3d64_A 279 IAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTAT----GNYHVINHDHMKAM 354 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECS----SSSCSBCHHHHHHC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECC----CcccccCHHHHhhC
Confidence 99999999999999999999999999999986332 44556888889999999999999997 58999999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccC--CcEEEcCCCC-CCcHH-HHHHHHHHH
Q 006212 310 KKGVRIVNVARGGV-IDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQH--ENVTVTPHLG-ASTKE-AQEGVAIEI 384 (656)
Q Consensus 310 K~gailINvaRg~i-vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~--~nvilTPH~g-~~T~e-a~~~~~~~~ 384 (656)
|+|++|||+|||++ ||+++| ++|++|+|+ +++|+ +|++.++|||.+ +|+++| |+| +.+.+ ++..++..+
T Consensus 355 K~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv---~plp~~~pL~~l~~~nvv~t-H~atg~~~~~~~~~~a~~~ 428 (494)
T 3d64_A 355 RHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDH---IIFPDGKRVILLAEGRLVNL-GCATGHPSFVMSNSFTNQT 428 (494)
T ss_dssp CTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEE---EECTTSCEEEEEGGGSBHHH-HTSCCSCHHHHHHHHHHHH
T ss_pred CCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEE---EECCCCCchhhcCCCCEEEE-eCcCCCCHHHHHHHHHHHH
Confidence 99999999999999 699999 999999997 55555 566678999988 999999 999 66754 788899999
Q ss_pred HHHHHHHHcCCCCCccccCCCCChhhhhhccchHHHHHHHhHHHHHhhcCCCCceEEEEEEeecCCC
Q 006212 385 AEAVVGALRGELSATAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARDP 451 (656)
Q Consensus 385 ~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~l~p~~~laerlG~l~~qL~~g~~~~k~i~i~~~Gs~a~ 451 (656)
++|+..|++|+.+.+.|+. +|.+.-..+.+ +.| +++|....||..+ ..+-+.+.+.|.+.+
T Consensus 429 ~~ni~~~~~g~~~~n~V~~--lp~~~d~~va~-l~L-~~~g~~~~~l~~~--q~~y~~v~~~g~~~~ 489 (494)
T 3d64_A 429 LAQIELFTRGGEYANKVYV--LPKHLDEKVAR-LHL-ARIGAQLSELSDD--QAAYIGVSKAGPFKP 489 (494)
T ss_dssp HHHHHHHHHGGGSCSSEEE--CCHHHHHHHHH-HHH-TTTTCCCCCCCHH--HHHHHTCCTTSCCSC
T ss_pred HHHHHHHHcCCCCCCceee--CChhHHHHHHH-HHH-HHcCChHHhhChh--hHHhEeeccCCCCCc
Confidence 9999999999999888862 45555545555 556 7777777777766 566677777787763
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.95 E-value=7.3e-28 Score=251.94 Aligned_cols=206 Identities=20% Similarity=0.226 Sum_probs=167.4
Q ss_pred CCCCeEEEeCC--CCHhHHHHhhcCC-cEEEecC----------CCHhHHHhhcCCCeEEEEc----------------C
Q 006212 88 TPKPTILVSEK--LGEAGLAILRSFG-NVECLYD----------LSPEALCEKISQCDALIVR----------------S 138 (656)
Q Consensus 88 ~~~~~ilv~~~--l~~~~~~~l~~~~-~v~~~~~----------~~~eel~~~i~~~d~liv~----------------~ 138 (656)
+..++|++... ......+.|.+.+ +|.+... ...+++.+.++++|+++++ .
T Consensus 3 ~~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 3 LTGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp CTTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGGGCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred ccCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHhcCCEEEeccccccCCceeecccccC
Confidence 44567888763 3345566676653 6654321 1235677788999999985 2
Q ss_pred CCCCCHHHHHhcCCcceeEEecccccCccch-hhHHhcCceeecCC------CCChhhHHHHHHHHHHHHHhchhHHHHH
Q 006212 139 GTKVTRSVFEAANGKLKVVGRAGVGIDNVDL-QAATEFGCLVVNAP------IANTVAAAEHGIALLASMARNVSQADAS 211 (656)
Q Consensus 139 ~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~-~aa~~~GI~V~n~p------~~n~~~vAE~~lal~L~~~R~i~~~~~~ 211 (656)
.+++++++++++ |+||+|+ +|+||+|+ ++|+++||.|+|+| ++|+.++||++++++|..
T Consensus 83 ~~~~~~~~l~~~-~~l~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~---------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKT-PNHCVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH---------- 148 (293)
T ss_dssp CCBCCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred CccchHHHHHhC-CCCCEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh----------
Confidence 346899999988 5899997 89999998 99999999999998 899999999999988852
Q ss_pred HHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCee---cCHHHHhccCCEE
Q 006212 212 IKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVEL---VSFDQALATADFI 287 (656)
Q Consensus 212 ~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~---~~l~ell~~aDvV 287 (656)
.+.++.|+|+||||+|.||+.+|++++++||+|++||++.. .+.+.+.|+.. .++++++++||+|
T Consensus 149 -----------~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvV 217 (293)
T 3d4o_A 149 -----------TDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVC 217 (293)
T ss_dssp -----------CSSCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEE
T ss_pred -----------cCCCCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEE
Confidence 25689999999999999999999999999999999999863 23445667764 3788999999999
Q ss_pred EEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 288 SLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 288 ~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
++|+|. ++++++.++.||+++++||++||+.
T Consensus 218 i~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 218 INTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred EECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 999995 6889999999999999999999754
No 39
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.93 E-value=1.2e-27 Score=266.14 Aligned_cols=271 Identities=18% Similarity=0.168 Sum_probs=212.2
Q ss_pred cceeE-EecccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCE
Q 006212 153 KLKVV-GRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKT 231 (656)
Q Consensus 153 ~LK~I-~~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gkt 231 (656)
+++-+ ...|+|||++ .++.++||.++|++++|. ++||+ ++|++....+.+..+ |.+ ..+..+.|++
T Consensus 210 ~i~GvveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~-------~~r~l~~~~~s~~~g-~~r--~~~~~l~Gkt 276 (494)
T 3ce6_A 210 SVKGVTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKS-------KFDNKYGTRHSLIDG-INR--GTDALIGGKK 276 (494)
T ss_dssp HCCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHH-------TTHHHHHHHHHHHHH-HHH--HHCCCCTTCE
T ss_pred CeEEEEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHH-------HHhhhhhhhhhhhHH-HHh--ccCCCCCcCE
Confidence 44545 4789999998 788999999999999999 99994 346665555555555 654 2355789999
Q ss_pred EEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcCC
Q 006212 232 LAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMK 310 (656)
Q Consensus 232 vGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK 310 (656)
|+|+|+|.||+.+|++++++|++|+++|++.. .+.+.+.|+...+++++++++|+|+.|++ +.++++.+.++.||
T Consensus 277 V~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atg----t~~~i~~~~l~~mk 352 (494)
T 3ce6_A 277 VLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATG----NKDIIMLEHIKAMK 352 (494)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSS----SSCSBCHHHHHHSC
T ss_pred EEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCC----CHHHHHHHHHHhcC
Confidence 99999999999999999999999999999863 35677889988899999999999999986 55688888999999
Q ss_pred CCcEEEEcCCCch-hcHHHHHH-hHhcCCeEEEEeeccCCCCCCCCCccccCCcEE----EcCCCCCCcHHHHHHHHHHH
Q 006212 311 KGVRIVNVARGGV-IDEEALVR-ALDSGVVAQAALDVFTEEPPAKDSKLVQHENVT----VTPHLGASTKEAQEGVAIEI 384 (656)
Q Consensus 311 ~gailINvaRg~i-vde~aL~~-aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvi----lTPH~g~~T~ea~~~~~~~~ 384 (656)
+|++|+|+||+++ +|+++|.+ +|+++.|. +++|+++.+|....-.|+..++++ +|||+++.+.+++ ..++
T Consensus 353 ~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s~---~~qa 428 (494)
T 3ce6_A 353 DHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSF---ANQT 428 (494)
T ss_dssp TTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHHH---HHHH
T ss_pred CCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHHH---HHHH
Confidence 9999999999998 89999988 78888886 668988764321112367778888 9999998887653 6788
Q ss_pred HHHHHHHHcCCCCCccccCCCCChhhhhhccchHHHHHHHhHHHHHhhcCCCCceEEEEEEeecCC
Q 006212 385 AEAVVGALRGELSATAINAPMVPSEVLSELAPYVVLAKKLGRLAVQLVSGGSGIKSVKLIYRSARD 450 (656)
Q Consensus 385 ~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~l~p~~~laerlG~l~~qL~~g~~~~k~i~i~~~Gs~a 450 (656)
.+++..+++|+...+.| .+.++.+++....+.| ..+|....+|..+ ..+-+.+.+.|.+.
T Consensus 429 ~~ai~~~~~g~~~~~~V---~~~P~~~De~vA~lhL-~~lg~~l~~lt~~--q~~y~~v~~~G~~k 488 (494)
T 3ce6_A 429 IAQIELWTKNDEYDNEV---YRLPKHLDEKVARIHV-EALGGHLTKLTKE--QAEYLGVDVEGPYK 488 (494)
T ss_dssp HHHHHHHHTGGGCCSSE---ECCCHHHHHHHHHHHH-HHHTCCCCCCCHH--HHHHHTCCTTSCCS
T ss_pred HHHHHHHHcCCCCCCEE---EECHHHHHHHHHHhhH-HHHHHHHHHhChh--HHHHcccccCCCCC
Confidence 99999999988776666 3345667666656655 5666666666655 44555566667665
No 40
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.93 E-value=1.3e-25 Score=235.61 Aligned_cols=210 Identities=16% Similarity=0.186 Sum_probs=162.4
Q ss_pred CCCCeEEEeCC--CCHhHHHHhhcCC-cEEEecCCCH-----------hHHHhhcCCCeEEEE----cC----------C
Q 006212 88 TPKPTILVSEK--LGEAGLAILRSFG-NVECLYDLSP-----------EALCEKISQCDALIV----RS----------G 139 (656)
Q Consensus 88 ~~~~~ilv~~~--l~~~~~~~l~~~~-~v~~~~~~~~-----------eel~~~i~~~d~liv----~~----------~ 139 (656)
+..+||++... ......+.|.+.+ +|.+. ..+. +++.+.+.++|++++ .. .
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~-~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a~ 83 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLV-GFDQLDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFSN 83 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEE-SCTTSSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSCS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEE-eccccccccccceeccchHHHHhcCCEEEeccccccCCccccccccc
Confidence 44567888865 2334556676654 55543 2222 235677889999997 21 3
Q ss_pred CC--CCHHHHHhcCCcceeEEecccccCccc-hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccc
Q 006212 140 TK--VTRSVFEAANGKLKVVGRAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGK 216 (656)
Q Consensus 140 ~~--v~~e~l~~~~~~LK~I~~~g~GvD~iD-~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~ 216 (656)
++ +++++++++ |++|+|+ +|+||+| +++|+++||.|+|+|++++ + +++|+++.+ +|.
T Consensus 84 ~~~~~~~~~l~~~-~~l~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~~--v---------~~~r~~~~~-----~g~ 143 (300)
T 2rir_A 84 EEVVLKQDHLDRT-PAHCVIF---SGISNAYLENIAAQAKRKLVKLFERDD--I---------AIYNSIPTV-----EGT 143 (300)
T ss_dssp SCEECCHHHHHTS-CTTCEEE---ESSCCHHHHHHHHHTTCCEEEGGGSHH--H---------HHHHHHHHH-----HHH
T ss_pred CCccchHHHHhhc-CCCCEEE---EecCCHHHHHHHHHCCCEEEeecCCCc--e---------EEEcCccHH-----HHH
Confidence 56 899999988 5899998 8999999 9999999999999999752 2 345666554 466
Q ss_pred cccc-cccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHHcCCee---cCHHHHhccCCEEEEcc
Q 006212 217 WLRS-KYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVEL---VSFDQALATADFISLHM 291 (656)
Q Consensus 217 W~~~-~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~~g~~~---~~l~ell~~aDvV~l~~ 291 (656)
|... ...+.++.|+|+||||+|.||+.+|++++++|++|++||++... +.+.+.|+.. .++++++++||+|++|+
T Consensus 144 ~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~ 223 (300)
T 2rir_A 144 IMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTI 223 (300)
T ss_dssp HHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECC
T ss_pred HHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECC
Confidence 7532 23578999999999999999999999999999999999998532 3334567653 47999999999999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
|. ++++++.++.||+++++||++||+.
T Consensus 224 p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 224 PS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp SS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred Ch-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 95 6789999999999999999999754
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.89 E-value=1.9e-22 Score=218.31 Aligned_cols=245 Identities=18% Similarity=0.215 Sum_probs=182.6
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHH-----------hhcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec
Q 006212 99 LGEAGLAILRSFG-NVECL------YDLSPEALC-----------EKISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA 160 (656)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~eel~-----------~~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~ 160 (656)
+.|+..+.|.+.+ +|.+. ..++.+++. +.+.++|+| +....++++|+.... ++..+++..
T Consensus 18 ltP~~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii-~~vk~p~~~e~~~l~-~~~~l~~~~ 95 (377)
T 2vhw_A 18 ITPAGVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLL-LKVKEPIAAEYGRLR-HGQILFTFL 95 (377)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEE-ECSSCCCGGGGGGCC-TTCEEEECC
T ss_pred cCHHHHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEE-EEeCCCChHHHhhcC-CCCEEEEEe
Confidence 5677777776554 55542 345666654 234568976 455556666666544 578888888
Q ss_pred ccccCccchhhHHhcCceee----------cCCCCChhhHHHHHHHHHHHHH-hchhHHHHHHHccccccccccccccCC
Q 006212 161 GVGIDNVDLQAATEFGCLVV----------NAPIANTVAAAEHGIALLASMA-RNVSQADASIKAGKWLRSKYVGVSLVG 229 (656)
Q Consensus 161 g~GvD~iD~~aa~~~GI~V~----------n~p~~n~~~vAE~~lal~L~~~-R~i~~~~~~~~~g~W~~~~~~g~~l~g 229 (656)
..++|..+++++.++||.++ |.|.+++ .||++..+++.+. |++. ..+.|+|..... ..++.|
T Consensus 96 ~~~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~--~ae~ag~~a~~~a~r~l~----~~~~g~~~~~~~-~~~l~g 168 (377)
T 2vhw_A 96 HLAASRACTDALLDSGTTSIAYETVQTADGALPLLAP--MSEVAGRLAAQVGAYHLM----RTQGGRGVLMGG-VPGVEP 168 (377)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHH--HHHHHHHHHHHHHHHHTS----GGGTSCCCCTTC-BTTBCC
T ss_pred cccCCHHHHHHHHHcCCeEEEeeeccccCCCccccCc--hHHHHHHHHHHHHHHHHH----HhcCCCcccccC-CCCCCC
Confidence 88999999999999999997 6777665 4599985554444 7763 344455432111 137899
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-cCCe-------ecCHHHHhccCCEEEEcc--CCCcccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-VGVE-------LVSFDQALATADFISLHM--PLNPTTS 298 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-~g~~-------~~~l~ell~~aDvV~l~~--Plt~~T~ 298 (656)
++|+|+|+|.||+.+|+.++++|++|+++|++.. .+.+.+ .|.. ..+++++++++|+|+.|+ |.+ ++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~-~t~ 247 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA-KAP 247 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS-CCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC-CCc
Confidence 9999999999999999999999999999998763 233333 4543 235788899999999977 544 788
Q ss_pred ccccHHHHhcCCCCcEEEEcC--CCchhcHHHHHHhHhcCCeEEEEeeccCC-CCCCCCCccccCCcEE--EcCCCCCCc
Q 006212 299 KIFNDETFAKMKKGVRIVNVA--RGGVIDEEALVRALDSGVVAQAALDVFTE-EPPAKDSKLVQHENVT--VTPHLGAST 373 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINva--Rg~ivde~aL~~aL~~g~i~gA~lDV~~~-EP~~~~~~L~~~~nvi--lTPH~g~~T 373 (656)
++++++.++.||+|++|||++ +|+ ||+. ||.+.+.|++..+|++ +|||+++.+
T Consensus 248 ~li~~~~l~~mk~g~~iV~va~~~Gg----------------------v~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~ 305 (377)
T 2vhw_A 248 KLVSNSLVAHMKPGAVLVDIAIDQGG----------------------CFEGSRPTTYDHPTFAVHDTLFYCVANMPASV 305 (377)
T ss_dssp CCBCHHHHTTSCTTCEEEEGGGGTTC----------------------SBTTCCCBCSSSCEEEETTEEEECBTTGGGGS
T ss_pred ceecHHHHhcCCCCcEEEEEecCCCC----------------------ccccccCCCCCCCEEEECCEEEEecCCcchhh
Confidence 999999999999999999998 332 6777 8877788999999998 999999998
Q ss_pred HH
Q 006212 374 KE 375 (656)
Q Consensus 374 ~e 375 (656)
..
T Consensus 306 ~~ 307 (377)
T 2vhw_A 306 PK 307 (377)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.77 E-value=2e-18 Score=186.12 Aligned_cols=277 Identities=17% Similarity=0.190 Sum_probs=177.7
Q ss_pred CCCHhHHHHhhcCC-cEEEe------cCCCHhHHHh----------hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEec
Q 006212 98 KLGEAGLAILRSFG-NVECL------YDLSPEALCE----------KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRA 160 (656)
Q Consensus 98 ~l~~~~~~~l~~~~-~v~~~------~~~~~eel~~----------~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~ 160 (656)
.+.|+..+.|.+.+ +|.+. ..+++++..+ .+ ++|+|+ ....++.++ ++.+++++++|+..
T Consensus 17 ~l~P~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il-~vk~p~~~~-~~~l~~~~~~~~~~ 93 (369)
T 2eez_A 17 ALTPGGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVV-KVKEPLPEE-YGFLREGLILFTYL 93 (369)
T ss_dssp SSCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEE-CSSCCCGGG-GGGCCTTCEEEECC
T ss_pred CcCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEE-EECCCCHHH-HhhcCCCcEEEEEe
Confidence 35677777776654 55542 3466676654 45 899876 444455444 66665689999999
Q ss_pred ccccCccchhhHHhcCceee---cCCCC-Ch----hhHHHHHH--HHHHHHHhchhHHHHHHHccccccccccccccCCC
Q 006212 161 GVGIDNVDLQAATEFGCLVV---NAPIA-NT----VAAAEHGI--ALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (656)
Q Consensus 161 g~GvD~iD~~aa~~~GI~V~---n~p~~-n~----~~vAE~~l--al~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 230 (656)
..+.|+.+++++.++||.+. +.+.. .. .++++.+- +.++++. .+..... ..+.|.. ...++.++
T Consensus 94 ~~~~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~~-~l~~~~~--g~~~~~~---~~~~l~~~ 167 (369)
T 2eez_A 94 HLAADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGAQ-FLEKPKG--GRGVLLG---GVPGVAPA 167 (369)
T ss_dssp CGGGCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHHH-HTSGGGT--SCCCCTT---CBTBBCCC
T ss_pred cccCCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHHH-HHHHhcC--CCceecC---CCCCCCCC
Confidence 99999999999999999998 55542 11 33444333 4443332 2322210 0112221 11368999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-cCCe-------ecCHHHHhccCCEEEEccCCCc-ccccc
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-VGVE-------LVSFDQALATADFISLHMPLNP-TTSKI 300 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-~g~~-------~~~l~ell~~aDvV~l~~Plt~-~T~~l 300 (656)
+++|+|.|.||+.+|+.++++|++|+++|++.. .+.+.+ .|.. ..+++++++++|+|+.|+|... .+..+
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~l 247 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKL 247 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchh
Confidence 999999999999999999999999999998752 233333 4543 1257788899999999999765 57788
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEE---------EcCCCCC
Q 006212 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVT---------VTPHLGA 371 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvi---------lTPH~g~ 371 (656)
+.++.++.||+|.+|||++. ..| |+ +|++ ||.+.+.|++..+++. +|||.++
T Consensus 248 i~~~~l~~mk~gg~iV~v~~-------------~~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as 308 (369)
T 2eez_A 248 VTRDMLSLMKEGAVIVDVAV-------------DQG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANMPGAVPRTST 308 (369)
T ss_dssp SCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCSGGGSHHHHH
T ss_pred HHHHHHHhhcCCCEEEEEec-------------CCC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCcchhcHHHHH
Confidence 89999999999999999982 112 44 8988 6665678899889998 7899877
Q ss_pred C--cHHHHHHHHHHHHHHHHHHHcCCCCCcccc
Q 006212 372 S--TKEAQEGVAIEIAEAVVGALRGELSATAIN 402 (656)
Q Consensus 372 ~--T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn 402 (656)
. +.+....+...+.+++..++.++...+.+|
T Consensus 309 ~~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~~~ 341 (369)
T 2eez_A 309 FALTNQTLPYVLKLAEKGLDALLEDAALLKGLN 341 (369)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHSCHHHHTTEE
T ss_pred HHHHHHHHHHHHHHHhcChhhhhcChHHhcCEE
Confidence 4 456667777777777766666665666655
No 43
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.77 E-value=2.4e-18 Score=187.59 Aligned_cols=220 Identities=18% Similarity=0.200 Sum_probs=157.1
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHHhh---------cCCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccc
Q 006212 99 LGEAGLAILRSFG-NVECL------YDLSPEALCEK---------ISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGV 162 (656)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~eel~~~---------i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~ 162 (656)
+.|+....|...+ +|.+. ..++.++..+. +-++|+++.. .. .+.+.++.+++++++|+..+.
T Consensus 25 ltP~~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~v-k~-p~~~~i~~l~~~~~li~~~~~ 102 (401)
T 1x13_A 25 ATPKTVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKV-NA-PLDDEIALLNPGTTLVSFIWP 102 (401)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEECS-SC-CCHHHHTTCCTTCEEEECCCG
T ss_pred CCHHHHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEEe-CC-CCHHHHHHhcCCCcEEEEecC
Confidence 4666666665543 45442 24566665432 3348987743 23 357778877678999999999
Q ss_pred ccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhH--HHHHHHcccccccccc-cc-----ccCCCEEEE
Q 006212 163 GIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQ--ADASIKAGKWLRSKYV-GV-----SLVGKTLAV 234 (656)
Q Consensus 163 GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~--~~~~~~~g~W~~~~~~-g~-----~l~gktvGI 234 (656)
|+|++|++++.++||.|. +.++|+|++.++.|.+++.+.. ....++.+.|....+. +. ++.|++|+|
T Consensus 103 ~~d~~~~~al~~~gI~v~-----~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~~~~~~~~~~~~~~g~l~g~~V~V 177 (401)
T 1x13_A 103 AQNPELMQKLAERNVTVM-----AMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMV 177 (401)
T ss_dssp GGCHHHHHHHHHTTCEEE-----EGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEE
T ss_pred CCCHHHHHHHHHCCCEEE-----EeehhhhhhhhcccchHHHHHHHHHHHHHHHHHHhcccccCCceeeccCcCCCEEEE
Confidence 999999999999999996 4566677666654333333222 1334444444211111 11 588999999
Q ss_pred EecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec----------------------------CHHHHhccCC
Q 006212 235 MGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV----------------------------SFDQALATAD 285 (656)
Q Consensus 235 IGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~----------------------------~l~ell~~aD 285 (656)
+|+|.||..+++.++++|++|+++|++. ..+.+.+.|..++ +++++++.+|
T Consensus 178 iGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aD 257 (401)
T 1x13_A 178 IGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVD 257 (401)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCS
T ss_pred ECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999986 3455667787644 2678888999
Q ss_pred EEEEc--cCCCccccccccHHHHhcCCCCcEEEEcC--CCchhcH
Q 006212 286 FISLH--MPLNPTTSKIFNDETFAKMKKGVRIVNVA--RGGVIDE 326 (656)
Q Consensus 286 vV~l~--~Plt~~T~~li~~~~l~~mK~gailINva--Rg~ivde 326 (656)
+|+.| +|. ..+..+++++.++.||+|++|||++ ||+.+++
T Consensus 258 vVI~~~~~pg-~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 258 IIVTTALIPG-KPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp EEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred EEEECCccCC-CCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 99999 553 2366888999999999999999999 7776543
No 44
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.76 E-value=2.1e-19 Score=196.51 Aligned_cols=155 Identities=21% Similarity=0.345 Sum_probs=125.4
Q ss_pred cccc-cCCCEEEEEecChhHHHHHHHHhc-CCCEEEEE-CCCCChhHHHHcCCeecCHHHHhccCCE-EEEccCCCcccc
Q 006212 223 VGVS-LVGKTLAVMGFGKVGSEVARRAKG-LGMNVIAH-DPYAPADKARAVGVELVSFDQALATADF-ISLHMPLNPTTS 298 (656)
Q Consensus 223 ~g~~-l~gktvGIIGlG~IG~~vA~~lk~-~G~~Vi~~-d~~~~~~~a~~~g~~~~~l~ell~~aDv-V~l~~Plt~~T~ 298 (656)
.|.+ |+|||+||+|+|+||+.+|+++++ |||+|++| |++... .+...++++++++.+|. .++ +|+ ++|+
T Consensus 205 ~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~~-----~~~~gvdl~~L~~~~d~~~~l-~~l-~~t~ 277 (419)
T 1gtm_A 205 LGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGI-----YNPDGLNADEVLKWKNEHGSV-KDF-PGAT 277 (419)
T ss_dssp TTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEE-----EEEEEECHHHHHHHHHHHSSS-TTC-TTSE
T ss_pred hCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCccc-----cCccCCCHHHHHHHHHhcCEe-ecC-ccCe
Confidence 3667 999999999999999999999999 99999999 554310 11123477777775553 233 576 6788
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCC-CccccCCcEEEcCCC----C---
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKD-SKLVQHENVTVTPHL----G--- 370 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~-~~L~~~~nvilTPH~----g--- 370 (656)
+ ++.+.|..||+ .++|||+||++||+++ +++|+.+.|++++ +||++.+ ++||..+|+++|||+ |
T Consensus 278 ~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V~itPhiaaNaGGvt 349 (419)
T 1gtm_A 278 N-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGILQIPDFLCNAGGVT 349 (419)
T ss_dssp E-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTCEEECHHHHTTHHHH
T ss_pred e-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCEEEECchhhhCCcce
Confidence 8 78889999998 5999999999999999 6899999999887 8887543 689999999999999 6
Q ss_pred --------------CCcHHHHHHHHHHHHHHHHHHH
Q 006212 371 --------------ASTKEAQEGVAIEIAEAVVGAL 392 (656)
Q Consensus 371 --------------~~T~ea~~~~~~~~~~~i~~~l 392 (656)
+.++|.++++...+.+++.+++
T Consensus 350 ~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~ 385 (419)
T 1gtm_A 350 VSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVY 385 (419)
T ss_dssp HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6677888888877777777776
No 45
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.74 E-value=3e-17 Score=177.93 Aligned_cols=220 Identities=18% Similarity=0.232 Sum_probs=155.5
Q ss_pred CCHhHHHHhhcCC-cEEEe------cCCCHhHHH-----------hhcCCCeEEEEcCCCCC----CHHHHHhcCCccee
Q 006212 99 LGEAGLAILRSFG-NVECL------YDLSPEALC-----------EKISQCDALIVRSGTKV----TRSVFEAANGKLKV 156 (656)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~------~~~~~eel~-----------~~i~~~d~liv~~~~~v----~~e~l~~~~~~LK~ 156 (656)
+.|+....|.+.+ +|.+. ..++.++.. +.+.++|+++... .++ +++.++.+++++++
T Consensus 18 l~P~~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~v~-~p~~~~~~~~~i~~l~~~~~~ 96 (384)
T 1l7d_A 18 ISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQ-RPMTAEEGTDEVALIKEGAVL 96 (384)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEE-CCCCGGGSCCGGGGSCTTCEE
T ss_pred CCHHHHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEEec-CcccccCCHHHHHhhccCCEE
Confidence 5666666666554 44442 245555554 4567899988653 455 67888888768999
Q ss_pred EEecccccCccchhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccccc-----c-cccCCC
Q 006212 157 VGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYV-----G-VSLVGK 230 (656)
Q Consensus 157 I~~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~-----g-~~l~gk 230 (656)
|+..+.+.|+.|++++.++||.++|. ......++++.+. +|+..+++ ..+..+..+.|....+. + .++.|+
T Consensus 97 i~~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~ 173 (384)
T 1l7d_A 97 MCHLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPA 173 (384)
T ss_dssp EEECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCC
T ss_pred EEEecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCC
Confidence 99999999999999999999999974 2222212223333 22222222 23334444444321111 2 378999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec---C---------------------------HHH
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV---S---------------------------FDQ 279 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~---~---------------------------l~e 279 (656)
+|+|+|.|.||..+++.++++|++|+++|++. ..+.+.++|...+ . +++
T Consensus 174 ~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~ 253 (384)
T 1l7d_A 174 RVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLK 253 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHH
Confidence 99999999999999999999999999999886 4456667776543 1 778
Q ss_pred HhccCCEEEEcc--CCCccccccccHHHHhcCCCCcEEEEcC--CCch
Q 006212 280 ALATADFISLHM--PLNPTTSKIFNDETFAKMKKGVRIVNVA--RGGV 323 (656)
Q Consensus 280 ll~~aDvV~l~~--Plt~~T~~li~~~~l~~mK~gailINva--Rg~i 323 (656)
+++.+|+|+.|+ |..+ +.++++++.++.||+|++|+|++ ||+.
T Consensus 254 ~~~~aDvVi~~~~~pg~~-~~~li~~~~l~~mk~g~vivdva~~~gg~ 300 (384)
T 1l7d_A 254 ELVKTDIAITTALIPGKP-APVLITEEMVTKMKPGSVIIDLAVEAGGN 300 (384)
T ss_dssp HHTTCSEEEECCCCTTSC-CCCCSCHHHHTTSCTTCEEEETTGGGTCS
T ss_pred HhCCCCEEEECCccCCCC-CCeeeCHHHHhcCCCCCEEEEEecCCCCC
Confidence 889999999888 4332 45788999999999999999998 6654
No 46
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.70 E-value=7.3e-17 Score=175.91 Aligned_cols=182 Identities=20% Similarity=0.296 Sum_probs=132.0
Q ss_pred CeEEEEcCCCCCCHHHHHhcC---CcceeEE-ecccccCccc-hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhch
Q 006212 131 CDALIVRSGTKVTRSVFEAAN---GKLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNV 205 (656)
Q Consensus 131 ~d~liv~~~~~v~~e~l~~~~---~~LK~I~-~~g~GvD~iD-~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i 205 (656)
.+.++ ..+..++.-+-.+.+ ++++-++ -.++|+..+. +.++.+.+|+|+|++...+....+...+..-++.+.+
T Consensus 123 p~~il-DdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldgi 201 (436)
T 3h9u_A 123 PNMLL-DDGGDLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGI 201 (436)
T ss_dssp CSEEE-ESSSHHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHHH
T ss_pred CceEe-ccccHHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHHH
Confidence 45444 444445444444332 2344443 3577777653 4567789999999986555443333332222222111
Q ss_pred hHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccC
Q 006212 206 SQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATA 284 (656)
Q Consensus 206 ~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~a 284 (656)
. + ..+.++.||||||+|+|.||+.+|++|++||++|+++|++. ....+...|+..+++++++++|
T Consensus 202 ~------r--------atg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~A 267 (436)
T 3h9u_A 202 K------R--------ATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEA 267 (436)
T ss_dssp H------H--------HHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTC
T ss_pred H------H--------hcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhC
Confidence 1 1 13678999999999999999999999999999999999976 3344667888888999999999
Q ss_pred CEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch-hcHHHHHH
Q 006212 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV-IDEEALVR 331 (656)
Q Consensus 285 DvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i-vde~aL~~ 331 (656)
|+|++ ++.|.++++++.|+.||+|++|+|+|||.+ ||.++|.+
T Consensus 268 DVVil----t~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 268 HIFVT----TTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp SEEEE----CSSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred CEEEE----CCCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 99997 446889999999999999999999999997 89999865
No 47
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.69 E-value=1.7e-18 Score=182.88 Aligned_cols=245 Identities=18% Similarity=0.154 Sum_probs=165.3
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCC-ChhHHHHcCC--e-ecCHHH-HhccCCEEEEccCCCcccc
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYA-PADKARAVGV--E-LVSFDQ-ALATADFISLHMPLNPTTS 298 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~-~~~~a~~~g~--~-~~~l~e-ll~~aDvV~l~~Plt~~T~ 298 (656)
++..++|||||+|.||+++|+.++..|+ +|++||++. ..+.+.+.|+ . ..++++ ++++||+|++|+|.. .+.
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~ 108 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFR 108 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHH
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHH
Confidence 3445899999999999999999999999 999999986 4456677777 3 347888 899999999999954 344
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCCcHH
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGASTKE 375 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~E---P~~~~~~L~~~~nvilTPH~g~~T~e 375 (656)
.++ ++....++++++|+|++..+....+++.+.+....+.+. -+++.| |..+...||+...+++||+-+.. .+
T Consensus 109 ~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~~~v~~h--Pm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~-~~ 184 (314)
T 3ggo_A 109 EIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGH--PIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KK 184 (314)
T ss_dssp HHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEE--ECCCCCCCSGGGCCTTTTTTCEEEECCCTTSC-HH
T ss_pred HHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCCCEEecC--cccCCcccchhhhhhhhhcCCEEEEEeCCCCC-HH
Confidence 444 455667999999999998765445566665544333322 233333 33456689999999999985443 33
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhhcc------chHH---HHHHHhH------HHHHhhcCCCCceE
Q 006212 376 AQEGVAIEIAEAVVGALRGELSATAINAPMVPSEVLSELA------PYVV---LAKKLGR------LAVQLVSGGSGIKS 440 (656)
Q Consensus 376 a~~~~~~~~~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~l~------p~~~---laerlG~------l~~qL~~g~~~~k~ 440 (656)
+. +.+.++++.-..... .+.++.++.+. |++- ++..+.. .+.+|+++ +|++
T Consensus 185 ~~--------~~v~~l~~~~G~~v~----~~~~~~hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~--~frd 250 (314)
T 3ggo_A 185 RL--------KLVKRVWEDVGGVVE----YMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKD 250 (314)
T ss_dssp HH--------HHHHHHHHHTTCEEE----ECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTT--TTTT
T ss_pred HH--------HHHHHHHHHcCCEEE----EcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccc--cHHH
Confidence 32 233333332222111 23334443322 2221 1111111 22457777 9999
Q ss_pred EEEEEeecCCCCCcccccccHHHHHHhhhhhhhccccccchHhHhhccCc
Q 006212 441 VKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADFTAKQKGL 490 (656)
Q Consensus 441 i~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vNA~~iAke~GI 490 (656)
+++++.+++. +|.++...|+..+...|+.+.++...+.++..-.+..++
T Consensus 251 ~tRia~~~p~-~w~di~~~N~~~~~~~l~~~~~~l~~l~~~l~~~d~~~l 299 (314)
T 3ggo_A 251 FTRIAKSDPI-MWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEEL 299 (314)
T ss_dssp HHHHTTSCHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCSHHH
T ss_pred HHHHhcCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 9999999998 999999999999888998888876777776665444444
No 48
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.65 E-value=4.3e-16 Score=169.71 Aligned_cols=161 Identities=22% Similarity=0.238 Sum_probs=120.8
Q ss_pred cceeEE-ecccccCccc-hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCC
Q 006212 153 KLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (656)
Q Consensus 153 ~LK~I~-~~g~GvD~iD-~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 230 (656)
+++-+. -.++|+-++- +...-+..++++|+. +++..+-+-......+.+..+..+ ..+.++.||
T Consensus 183 ~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVn----ds~tK~~fDn~yG~~eslvdgI~R----------atg~~L~GK 248 (464)
T 3n58_A 183 AIKGVTEETTTGVNRLYQLQKKGLLPFPAINVN----DSVTKSKFDNKYGCKESLVDGIRR----------GTDVMMAGK 248 (464)
T ss_dssp HCCEEEECSHHHHHHHHHHHHHTCCCSCEEECT----TSHHHHTTHHHHHHHHHHHHHHHH----------HHCCCCTTC
T ss_pred hccceeeccccchHHHHHHHHcCCCCCCEEeec----cHhhhhhhhhhhcchHHHHHHHHH----------hcCCcccCC
Confidence 344443 3577776642 233345567788775 455555555555444333322211 236789999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcC
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~m 309 (656)
|+||+|+|.||+.+|+++++|||+|+++|+.+ ....+...|++.+++++++++||+|+++. .|+++|+++.|+.|
T Consensus 249 TVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~M 324 (464)
T 3n58_A 249 VAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTT----GNKDVITIDHMRKM 324 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECC----CCccccCHHHHhcC
Confidence 99999999999999999999999999998765 23345667888889999999999999864 47899999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHHHH
Q 006212 310 KKGVRIVNVARGGV-IDEEALVR 331 (656)
Q Consensus 310 K~gailINvaRg~i-vde~aL~~ 331 (656)
|+|++|||+|||.+ +|.++|.+
T Consensus 325 K~GAILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 325 KDMCIVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp CTTEEEEECSSSTTTBTCGGGTT
T ss_pred CCCeEEEEcCCCCcccCHHHHHh
Confidence 99999999999998 88888753
No 49
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=7.3e-18 Score=180.02 Aligned_cols=250 Identities=12% Similarity=0.076 Sum_probs=161.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee-cCHHHHhcc----CCEEEEccCCCcccccccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-VSFDQALAT----ADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~-~~l~ell~~----aDvV~l~~Plt~~T~~li~ 302 (656)
-++|||||+|+||+++|+.|+..|++|++||++. ..+.+.+.|+.. .++++++++ ||+|++|+|. ..+..++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHH
Confidence 3579999999999999999999999999999886 455677788864 478888765 6999999994 45566652
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCCcHHHHH
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGASTKEAQE 378 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~~~E---P~~~~~~L~~~~nvilTPH~g~~T~ea~~ 378 (656)
.+..++++++|+|++..+....+++.+.+.. ..+.+. =+++.| |..++..||+..++++||+-+... +...
T Consensus 87 --~l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~~~~~v~~H--PmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~-e~~~ 161 (341)
T 3ktd_A 87 --AVHTHAPNNGFTDVVSVKTAVYDAVKARNMQHRYVGSH--PMAGTANSGWSASMDGLFKRAVWVVTFDQLFDG-TDIN 161 (341)
T ss_dssp --HHHHHCTTCCEEECCSCSHHHHHHHHHTTCGGGEECEE--ECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSS-CCCC
T ss_pred --HHHccCCCCEEEEcCCCChHHHHHHHHhCCCCcEecCC--ccccccccchhhhhhHHhcCCeEEEEeCCCCCh-hhhc
Confidence 3344699999999997665444455444432 223221 233333 224567899999999999854332 1000
Q ss_pred HHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhhcc------chH------HHHHHHhHHHHHhhcCCCCceEEEEEEe
Q 006212 379 GVAIEIAEAVVGALRGELSATAINAPMVPSEVLSELA------PYV------VLAKKLGRLAVQLVSGGSGIKSVKLIYR 446 (656)
Q Consensus 379 ~~~~~~~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~l~------p~~------~laerlG~l~~qL~~g~~~~k~i~i~~~ 446 (656)
.-.....+.+.++++.-..... .+.++.++.+. |++ .....-...+.+|+++ +|+++++++.
T Consensus 162 ~~~~~~~~~v~~l~~~~Ga~v~----~~~~~~HD~~~A~vshlPh~ia~aL~~~~~~~~~~~~~laa~--gfrd~tRia~ 235 (341)
T 3ktd_A 162 STWISIWKDVVQMALAVGAEVV----PSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAG--SYRDSTRVAG 235 (341)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEE----ECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTHHHHHHHCCH--HHHHHTGGGG
T ss_pred cchHHHHHHHHHHHHHcCCEEE----EeCHHHHHHHHHHHhHHHHHHHHHHHHHhhcchHHHHHHccc--cHHHHHHHhc
Confidence 0011123334444433322111 12233333222 211 1111122345678888 9999999999
Q ss_pred ecCCCCCcccccccHHHHHHhhhhhhhccccccchHhHhhccCceE
Q 006212 447 SARDPDDLDTRILRAMITKGIIEPISASFINLVNADFTAKQKGLRI 492 (656)
Q Consensus 447 Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vNA~~iAke~GI~v 492 (656)
+++. +|.++...|+..+...|+.+.++...+.++..-.+ .++.-
T Consensus 236 s~p~-lw~di~~~N~~~~~~~l~~~~~~L~~l~~~l~~~d-~~l~~ 279 (341)
T 3ktd_A 236 TDPG-LVRAMCESNAGPLVKALDEALAILHEAREGLTAEQ-PNIEQ 279 (341)
T ss_dssp SCHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTSSS-CCCHH
T ss_pred CCHH-HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHccc-HHHHH
Confidence 9998 99999999998888889888887666666665444 44443
No 50
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.63 E-value=2.6e-17 Score=179.56 Aligned_cols=210 Identities=17% Similarity=0.167 Sum_probs=163.3
Q ss_pred cceeEEecccccCccchhhHH-----hcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccc----ccc
Q 006212 153 KLKVVGRAGVGIDNVDLQAAT-----EFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRS----KYV 223 (656)
Q Consensus 153 ~LK~I~~~g~GvD~iD~~aa~-----~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~----~~~ 223 (656)
.+++|.+.|+|+|++++.++. ++++.++|.+|+ ..+++++.+.+++.+.|++....... .+.|.-. ...
T Consensus 81 a~~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a 158 (404)
T 1gpj_A 81 AVRHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELA 158 (404)
T ss_dssp HHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHH
T ss_pred HhhhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHH
Confidence 688999999999999999998 899999999988 57899999999999999987664333 4455311 011
Q ss_pred c---cccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCCh--hHHHHcCCee---cCHHHHhccCCEEEEccCCC
Q 006212 224 G---VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVGVEL---VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 224 g---~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~--~~a~~~g~~~---~~l~ell~~aDvV~l~~Plt 294 (656)
+ .++.|++|+|||+|.||+.+++.++.+|+ +|+++|++... +.+.+.|... .++.+++.++|+|+.|+|.+
T Consensus 159 ~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~ 238 (404)
T 1gpj_A 159 ERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAP 238 (404)
T ss_dssp HHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred HHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCC
Confidence 1 14799999999999999999999999999 99999997532 3456667654 36778889999999998743
Q ss_pred ccccccccHHHHhc--CC----CCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEE--c
Q 006212 295 PTTSKIFNDETFAK--MK----KGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTV--T 366 (656)
Q Consensus 295 ~~T~~li~~~~l~~--mK----~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvil--T 366 (656)
..+++...+.. || ++.+++|++ +|.+.+++++++||+++ +
T Consensus 239 ---~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~~l~~v~l~d~ 286 (404)
T 1gpj_A 239 ---HPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVENIEDVEVRTI 286 (404)
T ss_dssp ---SCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGGGSTTEEEEEH
T ss_pred ---CceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCccccccCCeEEEeH
Confidence 45677777776 42 566777765 36555788999999999 9
Q ss_pred CCCCCCcHHHHH----------HHHHHHHHHHHHHHcCCC
Q 006212 367 PHLGASTKEAQE----------GVAIEIAEAVVGALRGEL 396 (656)
Q Consensus 367 PH~g~~T~ea~~----------~~~~~~~~~i~~~l~g~~ 396 (656)
||++..+.++++ .+..+.++++..|+.+..
T Consensus 287 d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~ 326 (404)
T 1gpj_A 287 DDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKLK 326 (404)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999998888765 455566677777877643
No 51
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.57 E-value=9.7e-15 Score=158.91 Aligned_cols=159 Identities=20% Similarity=0.279 Sum_probs=115.0
Q ss_pred cceeEE-ecccccCccc-hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCC
Q 006212 153 KLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (656)
Q Consensus 153 ~LK~I~-~~g~GvD~iD-~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 230 (656)
+++-+. -.++|+-++- +...-+..++|+|+.+..+..--+ ........+..+ ++. ..+..+.||
T Consensus 156 ~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fD----n~yGt~~s~~~g---i~r-------at~~~L~Gk 221 (435)
T 3gvp_A 156 KIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFD----NLYCCRESILDG---LKR-------TTDMMFGGK 221 (435)
T ss_dssp TCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHH----THHHHHHHHHHH---HHH-------HHCCCCTTC
T ss_pred hcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhh----hhhhhHHHHHHH---HHH-------hhCceecCC
Confidence 344443 3566765542 333446779999987754444333 222111111111 110 136789999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcC
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~m 309 (656)
+++|+|+|.||+.+|++|++||++|+++|++. ....+...|+...++++++++||+|++| +.|.++++.+.|+.|
T Consensus 222 tV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~a----tgt~~lI~~e~l~~M 297 (435)
T 3gvp_A 222 QVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITC----TGNKNVVTREHLDRM 297 (435)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEEC----SSCSCSBCHHHHHHS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEEC----CCCcccCCHHHHHhc
Confidence 99999999999999999999999999999875 2345667788888999999999999995 457899999999999
Q ss_pred CCCcEEEEcCCCch-hcHHHH
Q 006212 310 KKGVRIVNVARGGV-IDEEAL 329 (656)
Q Consensus 310 K~gailINvaRg~i-vde~aL 329 (656)
|+|++|+|+|||.+ +|.++|
T Consensus 298 K~gailINvgrg~~EId~~~L 318 (435)
T 3gvp_A 298 KNSCIVCNMGHSNTEIDVASL 318 (435)
T ss_dssp CTTEEEEECSSTTTTBTGGGG
T ss_pred CCCcEEEEecCCCccCCHHHH
Confidence 99999999999988 666665
No 52
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.52 E-value=5.4e-15 Score=152.46 Aligned_cols=234 Identities=18% Similarity=0.139 Sum_probs=149.3
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCC-ChhHHHHcCCe---ecCHHHHhc-cCCEEEEccCCCcccccccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYA-PADKARAVGVE---LVSFDQALA-TADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~-~~~~a~~~g~~---~~~l~ell~-~aDvV~l~~Plt~~T~~li~ 302 (656)
++|||||+|.||+.+|+.|+..|+ +|++||++. ..+.+.+.|+. ..+++++++ +||+|++|+|.. .+..++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIAK 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHHH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHHH
Confidence 589999999999999999998888 999999975 33445566764 337888999 999999999944 4555553
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCC---CCCCCCccccCCcEEEcCCCCCCcHHHHHH
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE---PPAKDSKLVQHENVTVTPHLGASTKEAQEG 379 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~E---P~~~~~~L~~~~nvilTPH~g~~T~ea~~~ 379 (656)
+....++++++|+|++++.....+.+.+.+..+.+.+ .-+++.| |..+...|++..+++++||.++. .+..
T Consensus 81 -~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~-~~~~-- 154 (281)
T 2g5c_A 81 -KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD-KKRL-- 154 (281)
T ss_dssp -HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEECCCSSSC-HHHH--
T ss_pred -HHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEecCCCCC-HHHH--
Confidence 3455689999999999887666677777776543322 1233333 33345678888899999997665 2222
Q ss_pred HHHHHHHHHHHHHcCCCCCccccCCCCChhhhh-------hccchH--HHHHHHhH------HHHHhhcCCCCceEEEEE
Q 006212 380 VAIEIAEAVVGALRGELSATAINAPMVPSEVLS-------ELAPYV--VLAKKLGR------LAVQLVSGGSGIKSVKLI 444 (656)
Q Consensus 380 ~~~~~~~~i~~~l~g~~~~~~Vn~p~~~~~~~~-------~l~p~~--~laerlG~------l~~qL~~g~~~~k~i~i~ 444 (656)
+.+.++++.-.....+. ..+.++ .+..|+ .+.+.++. .+.+|+++ +++++++.
T Consensus 155 ------~~v~~l~~~~g~~~~~~----~~~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~ 222 (281)
T 2g5c_A 155 ------KLVKRVWEDVGGVVEYM----SPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGG--GFKDFTRI 222 (281)
T ss_dssp ------HHHHHHHHHTTCEEEEC----CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCCTT--TGGGC---
T ss_pred ------HHHHHHHHHcCCEEEEc----CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhhccc--cHHHHhHH
Confidence 23333343322221111 112211 111222 33333432 23456666 89999999
Q ss_pred EeecCCCCCcccccccHHHHHHhhhhhhhccccccchHh
Q 006212 445 YRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADF 483 (656)
Q Consensus 445 ~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vNA~~ 483 (656)
..+++. +|.+...++...+...|+.+..+.-.+.++..
T Consensus 223 ~~~~p~-~~~~~~~sn~~~~~~~l~~~~~~l~~~~~~i~ 260 (281)
T 2g5c_A 223 AKSDPI-MWRDIFLENKENVMKAIEGFEKSLNHLKELIV 260 (281)
T ss_dssp CCSCHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888 89999999987655556555554334444433
No 53
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.38 E-value=6e-14 Score=145.27 Aligned_cols=234 Identities=16% Similarity=0.125 Sum_probs=148.9
Q ss_pred CEEEEEecChhHHHHHHHHhcC--CCEEEEECCCC-ChhHHHHcCCe---ecCHHHHhccCCEEEEccCCCccccccccH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYA-PADKARAVGVE---LVSFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~--G~~Vi~~d~~~-~~~~a~~~g~~---~~~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
++|||||+|.||+.+|+.+... |++|++||++. ..+.+.+.|+. ..++++++++||+|++|+|... ...++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~~- 84 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFIK- 84 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHHH-
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHHH-
Confidence 6899999999999999999855 78999999875 33444556762 3478888999999999999443 344443
Q ss_pred HHHhc-CCCCcEEEEcCCCchhcHHHHHHhHhc-C-CeEE----EEeeccCCCCCCCCCccccCCcEEEcCCCCCCcHHH
Q 006212 304 ETFAK-MKKGVRIVNVARGGVIDEEALVRALDS-G-VVAQ----AALDVFTEEPPAKDSKLVQHENVTVTPHLGASTKEA 376 (656)
Q Consensus 304 ~~l~~-mK~gailINvaRg~ivde~aL~~aL~~-g-~i~g----A~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ea 376 (656)
+.... ++++++|+|++++.....+.+.+.+.. + ++.+ ++.++.+ |......|++.++++++||.++.. +
T Consensus 85 ~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g--~~~a~~~l~~g~~~~~~~~~~~~~-~- 160 (290)
T 3b1f_A 85 ILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSG--AVAANVNLFENAYYIFSPSCLTKP-N- 160 (290)
T ss_dssp HHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CC--TTSCCTTTTTTSEEEEEECTTCCT-T-
T ss_pred HHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcch--HHHhhHHHhCCCeEEEecCCCCCH-H-
Confidence 34456 899999999998777666777777765 2 2222 2233323 334456788889999999976652 2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhh-------ccch-----HHHHHHHh---HHHHHhhcCCCCceEE
Q 006212 377 QEGVAIEIAEAVVGALRGELSATAINAPMVPSEVLSE-------LAPY-----VVLAKKLG---RLAVQLVSGGSGIKSV 441 (656)
Q Consensus 377 ~~~~~~~~~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~-------l~p~-----~~laerlG---~l~~qL~~g~~~~k~i 441 (656)
..+.+.++++.-.....+ ++++.++. +.|. ++....+| ..+.+|+++ +|+++
T Consensus 161 -------~~~~v~~l~~~~G~~~~~----~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~~--~~~~~ 227 (290)
T 3b1f_A 161 -------TIPALQDLLSGLHARYVE----IDAAEHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFAAG--GFRDM 227 (290)
T ss_dssp -------HHHHHHHHTGGGCCEEEE----CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCCH--HHHHT
T ss_pred -------HHHHHHHHHHHcCCEEEE----cCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccchhhHHhhccc--cHHhh
Confidence 233455555443322111 12222221 2222 22222222 234567776 78887
Q ss_pred EEEEeecCCCCCcccccccHHHHHHhhhhhhhccccccchHh
Q 006212 442 KLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADF 483 (656)
Q Consensus 442 ~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vNA~~ 483 (656)
++.+.+++. +|.+...++...+...|+.+..+.-.+.++..
T Consensus 228 ~rla~~~p~-~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l~ 268 (290)
T 3b1f_A 228 TRIAESEPG-MWTSILLTNQEAVLDRIENFKQRLDEVSNLIK 268 (290)
T ss_dssp TGGGGSCHH-HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCHH-HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777887 89999999997766667666664334444443
No 54
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.35 E-value=1.6e-13 Score=143.38 Aligned_cols=240 Identities=13% Similarity=0.093 Sum_probs=141.6
Q ss_pred hHHHHHHHccccccccccccccCCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccC
Q 006212 206 SQADASIKAGKWLRSKYVGVSLVGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATA 284 (656)
Q Consensus 206 ~~~~~~~~~g~W~~~~~~g~~l~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~a 284 (656)
.++..++++..|..... ..++||||| +|.||+++|+.++..|++|.+||+... .++++.+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~-----~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~-----------~~~~~~~~~a 66 (298)
T 2pv7_A 3 RESYANENQFGFKTINS-----DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW-----------AVAESILANA 66 (298)
T ss_dssp ----------CCCCSCT-----TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG-----------GGHHHHHTTC
T ss_pred hhHHhhhhccCccccCC-----CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc-----------cCHHHHhcCC
Confidence 34556667778964221 357899999 999999999999999999999998642 1467889999
Q ss_pred CEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCC-CCCccccCCcE
Q 006212 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPA-KDSKLVQHENV 363 (656)
Q Consensus 285 DvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~-~~~~L~~~~nv 363 (656)
|+|++|+|.. .+..++. +....++++++|+|+++.+....+++.+.+. . ++....|.. +..+++...++
T Consensus 67 DvVilavp~~-~~~~vl~-~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~-~-------~~v~~hP~~g~~~~~~~g~~~ 136 (298)
T 2pv7_A 67 DVVIVSVPIN-LTLETIE-RLKPYLTENMLLADLTSVKREPLAKMLEVHT-G-------AVLGLHPMFGADIASMAKQVV 136 (298)
T ss_dssp SEEEECSCGG-GHHHHHH-HHGGGCCTTSEEEECCSCCHHHHHHHHHHCS-S-------EEEEEEECSCTTCSCCTTCEE
T ss_pred CEEEEeCCHH-HHHHHHH-HHHhhcCCCcEEEECCCCCcHHHHHHHHhcC-C-------CEEeeCCCCCCCchhhcCCeE
Confidence 9999999954 3666663 3445689999999998877654555554432 1 122223321 12357777889
Q ss_pred EEcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCccccCCCCChhhhhhcc------c-hH--HHHHHHh------HHH
Q 006212 364 TVTPHLGASTKEAQEGVAIEIAEAVVGALRGELSATAINAPMVPSEVLSELA------P-YV--VLAKKLG------RLA 428 (656)
Q Consensus 364 ilTPH~g~~T~ea~~~~~~~~~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~l~------p-~~--~laerlG------~l~ 428 (656)
++|||- +.+.. +.+.++++.-..... .++++.++.+. | |+ .+++.+. ..+
T Consensus 137 ~l~~~~---~~~~~--------~~v~~l~~~~G~~~~----~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~ 201 (298)
T 2pv7_A 137 VRCDGR---FPERY--------EWLLEQIQIWGAKIY----QTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANL 201 (298)
T ss_dssp EEEEEE---CGGGT--------HHHHHHHHHTTCEEE----ECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHH
T ss_pred EEecCC---CHHHH--------HHHHHHHHHcCCEEE----ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 999974 23322 223333332222111 12222222211 2 21 2333332 345
Q ss_pred HHhhcCCCCceE----EEEEEeecCCCCCcccccccHHHHHHhhhhhhhccccccchHhHhhccCc
Q 006212 429 VQLVSGGSGIKS----VKLIYRSARDPDDLDTRILRAMITKGIIEPISASFINLVNADFTAKQKGL 490 (656)
Q Consensus 429 ~qL~~g~~~~k~----i~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn~vNA~~iAke~GI 490 (656)
.+|+++ +|++ +++.+.+++. +|.+...+|...+. .|+.+.++.-.+.++..-.+..++
T Consensus 202 ~~la~~--~f~~~~~~~~ria~~~p~-~~~di~~sn~~~~~-~l~~~~~~l~~~~~~l~~~d~~~l 263 (298)
T 2pv7_A 202 LALSSP--IYRLELAMIGRLFAQDAE-LYADIIMDKSENLA-VIETLKQTYDEALTFFENNDRQGF 263 (298)
T ss_dssp HHTCCH--HHHHHHHHHHHHHTSCHH-HHHHHHC----CHH-HHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhcCH--HHHHHHHHHHHHhcCCHH-HHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHcCCHHHH
Confidence 667777 8887 7777888887 99999999988888 777776654455555443333333
No 55
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.24 E-value=4e-10 Score=121.37 Aligned_cols=216 Identities=14% Similarity=0.127 Sum_probs=133.8
Q ss_pred CCHhHHHHhhcCC-cEEEec------CCCHhHHHhh---c---CCCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccC
Q 006212 99 LGEAGLAILRSFG-NVECLY------DLSPEALCEK---I---SQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGID 165 (656)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~~------~~~~eel~~~---i---~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD 165 (656)
+.|+....|.+.+ +|.+.. .++.++..+. + -.+|+|+- - ...+.+-++.+.++-.+++..---.|
T Consensus 40 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk-V-k~p~~~e~~~l~~g~~l~~~lh~~~~ 117 (381)
T 3p2y_A 40 LVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK-V-NPPTSDEISQLKPGSVLIGFLAPRTQ 117 (381)
T ss_dssp SCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC-S-SCCCHHHHTTSCTTCEEEECCCTTTC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE-e-CCCChhHHhhccCCCEEEEEeccccC
Confidence 5677777776554 555532 3566666441 1 12676652 1 23556667766667777766554445
Q ss_pred ccchhhHHhcCceeecCCCCC----hhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccc-cccCCCEEEEEecChh
Q 006212 166 NVDLQAATEFGCLVVNAPIAN----TVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAVMGFGKV 240 (656)
Q Consensus 166 ~iD~~aa~~~GI~V~n~p~~n----~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGlG~I 240 (656)
.=-++++.++||...---... ..+. .++.-|-.++-+..-......-++.......+ ..+.+++|+|||+|.|
T Consensus 118 ~~l~~~l~~~~it~ia~E~i~~~~~~~~l--~~l~~~s~iAGy~Av~~aa~~l~~~~~~l~~~~~~v~~~kV~ViG~G~i 195 (381)
T 3p2y_A 118 PELASRLRIADVTAFAMESIPRISRAQTM--DALSSQANVAGYKAVLLGASLSTRFVPMLTTAAGTVKPASALVLGVGVA 195 (381)
T ss_dssp HHHHHHHHHTTCEEEEGGGCCSSGGGGGG--CHHHHHHHHHHHHHHHHHHHHCSSCSSCEECSSCEECCCEEEEESCSHH
T ss_pred HHHHHHHHHCCCeEEEeeccccccccccc--eeecchhHHHHHHHHHHHHHHhhhhhhhhhcccCCcCCCEEEEECchHH
Confidence 444688899999885332221 1110 01111111111100000111111111111111 2578999999999999
Q ss_pred HHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec--------------------------CHHHHhccCCEEEEcc--
Q 006212 241 GSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV--------------------------SFDQALATADFISLHM-- 291 (656)
Q Consensus 241 G~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~--------------------------~l~ell~~aDvV~l~~-- 291 (656)
|..+|+.++++|++|++||++. ..+.+.+.|..++ ++++.+++||+|+.++
T Consensus 196 G~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 196 GLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence 9999999999999999999987 4456666776543 3678899999999875
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
|. ..+..+++++.++.||||++|||++
T Consensus 276 Pg-~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 276 PG-RPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp TT-SCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred CC-cccceeecHHHHhcCCCCcEEEEEe
Confidence 53 2356789999999999999999997
No 56
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.22 E-value=1.4e-11 Score=129.14 Aligned_cols=113 Identities=20% Similarity=0.274 Sum_probs=95.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc--HHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~--~~~ 305 (656)
|+|||||+|.||..||++|...|++|.+||++. ..+...+.|.... ++.|+++.||+|++|+|..+..+.++. ...
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 689999999999999999999999999999986 3455667788765 899999999999999998877777653 236
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEee
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALD 344 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lD 344 (656)
+..+++|.++||++....-+...+.+.+++..+ ..+|
T Consensus 84 ~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~--~~lD 120 (300)
T 3obb_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARERGL--AMLD 120 (300)
T ss_dssp TTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC--EEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC--EEEe
Confidence 778999999999999999999999999988766 3455
No 57
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.21 E-value=1.3e-11 Score=129.30 Aligned_cols=126 Identities=17% Similarity=0.108 Sum_probs=98.6
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~ 302 (656)
.++..++|||||+|.||+.+|++|...|++|++||++. ..+.+.+.|+... ++++++++||+|++|+|....++.++.
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~ 84 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG 84 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc
Confidence 45667899999999999999999999999999999986 3344555687654 899999999999999996666777775
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCC
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEP 350 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP 350 (656)
.+.+..+++|.++||+++....+.+.+.+.+++..+.....-|++..|
T Consensus 85 ~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~ 132 (306)
T 3l6d_A 85 MPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPR 132 (306)
T ss_dssp STTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGG
T ss_pred ccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcc
Confidence 334566789999999999999888888888876544322223555443
No 58
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.20 E-value=1.5e-11 Score=129.70 Aligned_cols=130 Identities=17% Similarity=0.160 Sum_probs=92.6
Q ss_pred HHHHcccccccccc-----ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhc
Q 006212 210 ASIKAGKWLRSKYV-----GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALA 282 (656)
Q Consensus 210 ~~~~~g~W~~~~~~-----g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~ 282 (656)
+.++...|..+.+. ......++|||||+|.||..+|++|...|++|.+||++. ..+...+.|+... +++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~ 86 (320)
T 4dll_A 7 HSSGVDLGTENLYFQSMTVESDPYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAAR 86 (320)
T ss_dssp ----------------------CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHT
T ss_pred ccccccccccccceechhhccccCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHh
Confidence 44555555544321 123456799999999999999999999999999999986 3344555677654 8999999
Q ss_pred cCCEEEEccCCCccccccccH-HHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeE
Q 006212 283 TADFISLHMPLNPTTSKIFND-ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (656)
Q Consensus 283 ~aDvV~l~~Plt~~T~~li~~-~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~ 339 (656)
+||+|++|+|....++.++.. ..+..++++.+|||++++.+.+.+.+.+.+++..+.
T Consensus 87 ~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 144 (320)
T 4dll_A 87 DADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIA 144 (320)
T ss_dssp TCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred cCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCE
Confidence 999999999966566665532 456679999999999999998888888888775443
No 59
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.19 E-value=5.2e-12 Score=129.78 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=136.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCe---ecCHHHHhccCCEEEEccCCCccccccccHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVE---LVSFDQALATADFISLHMPLNPTTSKIFNDET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~---~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 305 (656)
++|+|||+|.||+.+|+.|...|++|.+||++. ..+.+.+.|+. ..+++++ +++|+|++|+|. ..+..++ .+.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~-~~l 77 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL-EKL 77 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH-HHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH-HHH
Confidence 379999999999999999999999999999875 33444556663 3478888 999999999993 3444454 344
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCC---CCCCCCCccccCCcEEEcCCCCCCcHHHHHHHHH
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTE---EPPAKDSKLVQHENVTVTPHLGASTKEAQEGVAI 382 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~---EP~~~~~~L~~~~nvilTPH~g~~T~ea~~~~~~ 382 (656)
...++++++|+|++.......+.+.+.+. ..+.+ .-+++. .|......++....++++|+-+.. .+.
T Consensus 78 ~~~~~~~~~vv~~~~~~~~~~~~~~~~~~-~~~~~--~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~-~~~------ 147 (279)
T 2f1k_A 78 IPHLSPTAIVTDVASVKTAIAEPASQLWS-GFIGG--HPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTD-PEQ------ 147 (279)
T ss_dssp GGGSCTTCEEEECCSCCHHHHHHHHHHST-TCEEE--EECCCCSCSSGGGCCTTTTTTCEEEEEECTTCC-HHH------
T ss_pred HhhCCCCCEEEECCCCcHHHHHHHHHHhC-CEeec--CcccCCccCCHHHHhHHHhCCCcEEEecCCCCC-HHH------
Confidence 45689999999998776655666655443 33322 133322 232334467778889999986543 332
Q ss_pred HHHHHHHHHHcCCCCCccccCCCCChhhhhhcc------c-hH--HHHHH---Hh-----HHHHHhhcCCCCceEEEEEE
Q 006212 383 EIAEAVVGALRGELSATAINAPMVPSEVLSELA------P-YV--VLAKK---LG-----RLAVQLVSGGSGIKSVKLIY 445 (656)
Q Consensus 383 ~~~~~i~~~l~g~~~~~~Vn~p~~~~~~~~~l~------p-~~--~laer---lG-----~l~~qL~~g~~~~k~i~i~~ 445 (656)
.+.+.++++.-.....+. .....+.+. | |+ .+++. .| ..+.+|+.+ +++++++..
T Consensus 148 --~~~v~~l~~~~g~~~~~~----~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~--~~~~~~r~~ 219 (279)
T 2f1k_A 148 --LACLRSVLEPLGVKIYLC----TPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASS--GFRDTSRVG 219 (279)
T ss_dssp --HHHHHHHHGGGTCEEEEC----CHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCH--HHHHHHTGG
T ss_pred --HHHHHHHHHHcCCEEEEc----CHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCC--cccchhccc
Confidence 234445554333221111 111111111 1 11 11211 12 245567766 777766666
Q ss_pred eecCCCCCcccccccHHHHHHhhhhhhh
Q 006212 446 RSARDPDDLDTRILRAMITKGIIEPISA 473 (656)
Q Consensus 446 ~Gs~a~~~~~~~~~~~a~l~GlL~~~~~ 473 (656)
.+++. +|.+...++...+...|+.+..
T Consensus 220 ~~~p~-~~~~~~~s~~~~~~~~l~~~~~ 246 (279)
T 2f1k_A 220 GGNPE-LGTMMATYNQRALLKSLQDYRQ 246 (279)
T ss_dssp GSCHH-HHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCCHH-HHHHHHHHhHHHHHHHHHHHHH
Confidence 77887 8888888887765544544433
No 60
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.19 E-value=1.5e-11 Score=128.69 Aligned_cols=120 Identities=15% Similarity=0.216 Sum_probs=95.3
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHh
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~ 307 (656)
++|||||+|.||..+|++|...|++|++||++. ..+.+.+.|+... ++.+++++||+|++|+|..+..+.++....+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 589999999999999999999999999999886 3445566787765 89999999999999999777777777777888
Q ss_pred cCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCC
Q 006212 308 KMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (656)
Q Consensus 308 ~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~E 349 (656)
.++++.++||++....-..+.+.+.+++..+...-.-|++..
T Consensus 86 ~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~ 127 (297)
T 4gbj_A 86 KLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARP 127 (297)
T ss_dssp HHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCH
T ss_pred hcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCc
Confidence 999999999999999888888888888766633322244443
No 61
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.17 E-value=4.3e-11 Score=125.56 Aligned_cols=115 Identities=9% Similarity=0.100 Sum_probs=92.7
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.....-++|||||+|.||..+|++|...|++|.+||++. ..+.+.+.|+... ++++++++||+|++|+|....++.++
T Consensus 16 ~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 16 PRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp --CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred cccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence 345556899999999999999999999999999999986 3455566788765 89999999999999999655666555
Q ss_pred --cHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 302 --NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 302 --~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
....+..++++.+|||+++......+.+.+.+.+..+
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 134 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGG 134 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 2345567899999999999888888888877776544
No 62
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.16 E-value=1.1e-09 Score=118.78 Aligned_cols=218 Identities=16% Similarity=0.205 Sum_probs=129.0
Q ss_pred CCHhHHHHhhcCC-cEEEec------CCCHhHHHh---------hcCCCeEEEEcCCCCCCHHHHHhcCCcceeEEeccc
Q 006212 99 LGEAGLAILRSFG-NVECLY------DLSPEALCE---------KISQCDALIVRSGTKVTRSVFEAANGKLKVVGRAGV 162 (656)
Q Consensus 99 l~~~~~~~l~~~~-~v~~~~------~~~~eel~~---------~i~~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~ 162 (656)
+.|+....|.+.+ +|.+.. .++.++..+ .+.++|+|+--. +.+.+-++.+.++-.+++..--
T Consensus 43 ltP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlkVk--~p~~~e~~~l~~g~~l~~~lh~ 120 (405)
T 4dio_A 43 GSVESVKKLKSLGFDVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILKVR--RPSAQEISGYRSGAVVIAIMDP 120 (405)
T ss_dssp CCHHHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEEEE--CCCTTTGGGSCTTCEEEEECCC
T ss_pred CCHHHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEEeC--CCChhHHhhcCCCcEEEEEecc
Confidence 4566666665543 454432 245555433 133578766321 2233444555556667765544
Q ss_pred ccCccchhhHHhcCceeecCCCCChhhHHHH--HHHHHHHHHhchhHHHHHHHccccccccccc-cccCCCEEEEEecCh
Q 006212 163 GIDNVDLQAATEFGCLVVNAPIANTVAAAEH--GIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAVMGFGK 239 (656)
Q Consensus 163 GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~--~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGlG~ 239 (656)
.-|.=-++++.++||...---.....+-|.- +++-|-.++-+..-......-++.......+ -.+.+.+|+|+|+|.
T Consensus 121 ~~~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av~~aa~~l~~~~~~l~t~~g~v~~~kV~ViG~G~ 200 (405)
T 4dio_A 121 YGNEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAVIDAAYEYDRALPMMMTAAGTVPAAKIFVMGAGV 200 (405)
T ss_dssp TTCHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHHHHHHHHCSSCSSCEEETTEEECCCEEEEECCSH
T ss_pred ccCHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHHHHHHHHhHhhhchhhccCCCcCCCEEEEECCcH
Confidence 3344446888999998853322210000000 1111111111111001111111111111111 147899999999999
Q ss_pred hHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeec------------------------------CHHHHhccCCEEE
Q 006212 240 VGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV------------------------------SFDQALATADFIS 288 (656)
Q Consensus 240 IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~------------------------------~l~ell~~aDvV~ 288 (656)
||..+|+.++++|++|++||++.. .+.+.+.|..++ ++++.+++||+|+
T Consensus 201 iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI 280 (405)
T 4dio_A 201 AGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVI 280 (405)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEE
Confidence 999999999999999999999874 355666665431 4678899999999
Q ss_pred Ecc--CCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 289 LHM--PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 289 l~~--Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
.++ |.. ....+++++.++.||||++|||++
T Consensus 281 ~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 281 TTALIPGR-PAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp ECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEe
Confidence 875 533 467789999999999999999997
No 63
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.15 E-value=2.9e-10 Score=121.56 Aligned_cols=109 Identities=24% Similarity=0.336 Sum_probs=92.9
Q ss_pred cc-ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeecCHHHHhc-cCCEEEEccCCCcccccc
Q 006212 224 GV-SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALA-TADFISLHMPLNPTTSKI 300 (656)
Q Consensus 224 g~-~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~~l~ell~-~aDvV~l~~Plt~~T~~l 300 (656)
|. +|.||||+|+|+|+||+.+|++++++|++|+++|++.. .+.+...|++.+++++++. +||+++.| .+.++
T Consensus 169 G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-----A~~~~ 243 (355)
T 1c1d_A 169 GLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-----AMGGV 243 (355)
T ss_dssp TCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-----SCSCC
T ss_pred CCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-----HHHhh
Confidence 55 79999999999999999999999999999999998753 2345557888888899988 99999753 57889
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeE
Q 006212 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~ 339 (656)
|+.+.++.|| ..+|+|.+++++.++++ .++|+++.|.
T Consensus 244 I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 244 ITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp BCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred cCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 9999999998 68999999999998777 4778877664
No 64
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.15 E-value=1e-10 Score=123.31 Aligned_cols=137 Identities=16% Similarity=0.116 Sum_probs=95.8
Q ss_pred HHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCC-CEEEEECCCC--------ChhHHHHcCCeec-CH
Q 006212 208 ADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYA--------PADKARAVGVELV-SF 277 (656)
Q Consensus 208 ~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G-~~Vi~~d~~~--------~~~~a~~~g~~~~-~l 277 (656)
++.+.+-+.|.++.++.. -.++|||||+|.||..+|++|...| ++|++||++. ..+.+.+.|+ .. ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~--M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~ 81 (317)
T 4ezb_A 5 HHHSSGVDLGTENLYFQS--MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDD 81 (317)
T ss_dssp ----------CCCHHHHT--SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESS
T ss_pred cccccccccCcccCcccc--cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCH
Confidence 444555667777654322 2378999999999999999999999 9999999874 1123345577 66 89
Q ss_pred HHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCC
Q 006212 278 DQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (656)
Q Consensus 278 ~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~E 349 (656)
++++++||+|++|+|....... + .+....++++.+|||+++......+.+.+.+++..+....--|++.+
T Consensus 82 ~e~~~~aDvVi~avp~~~~~~~-~-~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~ 151 (317)
T 4ezb_A 82 VAGIACADVVLSLVVGAATKAV-A-ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARV 151 (317)
T ss_dssp GGGGGGCSEEEECCCGGGHHHH-H-HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCS
T ss_pred HHHHhcCCEEEEecCCHHHHHH-H-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCc
Confidence 9999999999999996554433 3 55667799999999999988888888888887754433222466644
No 65
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.14 E-value=1.3e-11 Score=131.34 Aligned_cols=137 Identities=23% Similarity=0.298 Sum_probs=99.9
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC--hhHHHHcCCeecCHHHHhccCCEEEEccCCCcccccccc
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP--ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~--~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~ 302 (656)
..+.+++|||||+|.||+++|+.|+..|++|+++|+... .+.+.+.|+...++++++++||+|++|+|... ...++.
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~-~~~v~~ 90 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEF-QGRLYK 90 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHH-HHHHHH
T ss_pred chhcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHH-HHHHHH
Confidence 467899999999999999999999999999999998764 35566778876689999999999999999443 355554
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCC---Ccccc---CCcEEEcCCCCC
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKD---SKLVQ---HENVTVTPHLGA 371 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~---~~L~~---~~nvilTPH~g~ 371 (656)
++....|+++++|++++ + +.. ....+. .+.+.|++..+|..+. ..|++ ..++++|||.+.
T Consensus 91 ~~i~~~l~~~~ivi~~~--g-v~~--~~~~~~----~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~ 156 (338)
T 1np3_A 91 EEIEPNLKKGATLAFAH--G-FSI--HYNQVV----PRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDA 156 (338)
T ss_dssp HHTGGGCCTTCEEEESC--C-HHH--HTTSSC----CCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECS
T ss_pred HHHHhhCCCCCEEEEcC--C-chh--HHHhhc----CCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCC
Confidence 34556799999999984 2 232 222222 1233456666664333 24666 788999999643
No 66
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.14 E-value=1.2e-10 Score=122.51 Aligned_cols=140 Identities=14% Similarity=0.132 Sum_probs=91.9
Q ss_pred HHHHHcccccccccc--ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC---ChhHHHHcCCeec-CHHHHh
Q 006212 209 DASIKAGKWLRSKYV--GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA---PADKARAVGVELV-SFDQAL 281 (656)
Q Consensus 209 ~~~~~~g~W~~~~~~--g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~---~~~~a~~~g~~~~-~l~ell 281 (656)
++.++++.|.+.... ......++|||||+|.||..+|++|...|+ +|.+||++. ..+.+.+.|+... ++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~ 81 (312)
T 3qsg_A 2 HHHHHHSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA 81 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH
T ss_pred CcccccccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH
Confidence 345667777653221 123345799999999999999999999999 999999962 3345566788765 899999
Q ss_pred ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC--CeEEEEeeccCCCC
Q 006212 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG--VVAQAALDVFTEEP 350 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g--~i~gA~lDV~~~EP 350 (656)
++||+|++|+|...... .+ .+....++++.+|||+++.......++.+.+.+. .+.....-|++.+|
T Consensus 82 ~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~ 150 (312)
T 3qsg_A 82 GECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVK 150 (312)
T ss_dssp HHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCST
T ss_pred hcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCch
Confidence 99999999999654333 33 5566779999999999998888888887777654 23222223566443
No 67
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.14 E-value=1.6e-11 Score=125.75 Aligned_cols=176 Identities=16% Similarity=0.153 Sum_probs=123.6
Q ss_pred CCCHhHHHhhcCC----CeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccchhhHHhcCceeecCCCCChhhHHHH
Q 006212 118 DLSPEALCEKISQ----CDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAEH 193 (656)
Q Consensus 118 ~~~~eel~~~i~~----~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE~ 193 (656)
+.+++++.+.+.+ ++++.+. .++.+++++.+ ++|.-+++...|+|.++. +.| +.+|+|++.
T Consensus 37 ~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~-~~l~~~a~~~gavn~i~~----~~g----~~~g~ntd~---- 101 (263)
T 2d5c_A 37 DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHL-DWVSPEAQRIGAVNTVLQ----VEG----RLFGFNTDA---- 101 (263)
T ss_dssp ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGC-SEECHHHHHHTCCCEEEE----ETT----EEEEECCHH----
T ss_pred eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHH-HHHhHHHHHhCCCCcEEc----cCC----eEEEeCCCH----
Confidence 4566666665543 4555553 46778888877 588888999999999976 344 334667654
Q ss_pred HHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC--hhHHHHcC
Q 006212 194 GIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP--ADKARAVG 271 (656)
Q Consensus 194 ~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~--~~~a~~~g 271 (656)
.+++.++.| .+.++.| +++|||+|.||+.+|+.|...|++|.++|++.. ...+...|
T Consensus 102 -~g~~~~l~~-------------------~~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~ 160 (263)
T 2d5c_A 102 -PGFLEALKA-------------------GGIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG 160 (263)
T ss_dssp -HHHHHHHHH-------------------TTCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT
T ss_pred -HHHHHHHHH-------------------hCCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence 244444432 1457889 999999999999999999999999999998752 22333446
Q ss_pred CeecCHHHHhccCCEEEEccCCCc--cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 272 VELVSFDQALATADFISLHMPLNP--TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 272 ~~~~~l~ell~~aDvV~l~~Plt~--~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
..+.+++++ +++|+|++|+|... ++...+. ...+++|.+++|++.+.. +. .+.++.++
T Consensus 161 ~~~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~g~~viD~~~~p~-~t-~l~~~a~~ 220 (263)
T 2d5c_A 161 LRAVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPEEGAAVDLVYRPL-WT-RFLREAKA 220 (263)
T ss_dssp CEECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCSSSEEEESCCSSS-SC-HHHHHHHH
T ss_pred cchhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCCCCEEEEeecCCc-cc-HHHHHHHH
Confidence 555578888 99999999999762 2334443 456899999999998643 33 35554444
No 68
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.14 E-value=7.9e-11 Score=122.79 Aligned_cols=108 Identities=20% Similarity=0.221 Sum_probs=91.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
.++|||||+|.||..+|++|...|++|.+||++. ..+.+.+.|+... +++++++ ||+|++|+|....++.++ ...+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHH
Confidence 3689999999999999999999999999999986 4456667788765 8999999 999999999666666666 5667
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 307 AKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 307 ~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
..++++.++||+++......+.+.+.+.+..+
T Consensus 93 ~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 124 (296)
T 3qha_A 93 GHAKPGTVIAIHSTISDTTAVELARDLKARDI 124 (296)
T ss_dssp TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTC
T ss_pred HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCC
Confidence 77999999999999998888888888876544
No 69
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.13 E-value=1.3e-10 Score=124.72 Aligned_cols=121 Identities=11% Similarity=0.190 Sum_probs=98.5
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccC---CEEEEccCCCccccccc
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATA---DFISLHMPLNPTTSKIF 301 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~a---DvV~l~~Plt~~T~~li 301 (656)
+.+++|||||+|.||..+|++|...|++|.+||++. ..+.+.+.|+... +++++++++ |+|++|+|.. .+..++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl 98 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML 98 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH
Confidence 567899999999999999999999999999999985 3344555677654 899999999 9999999966 666666
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCC
Q 006212 302 NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~E 349 (656)
...+..+++|.+|||++++...+...+.+.+++..+......|++.+
T Consensus 99 -~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~ 145 (358)
T 4e21_A 99 -QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGI 145 (358)
T ss_dssp -HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGG
T ss_pred -HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCH
Confidence 55677799999999999999888888888888776655555676655
No 70
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.11 E-value=1.1e-10 Score=120.74 Aligned_cols=109 Identities=13% Similarity=0.160 Sum_probs=90.5
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc--HHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~--~~~ 305 (656)
++|||||+|.||..+|++|...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|....++.++. ...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 689999999999999999999999999999986 4455666787665 899999999999999996556666551 445
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
+..++++.++||+++....+.+.+.+.+++..+
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGG 114 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 567999999999999888888888887776544
No 71
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.10 E-value=9.2e-10 Score=113.95 Aligned_cols=130 Identities=18% Similarity=0.129 Sum_probs=94.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHc-----------C--------------Cee-cCHHHHhc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV-----------G--------------VEL-VSFDQALA 282 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~-----------g--------------~~~-~~l~ell~ 282 (656)
++|+|||.|.||..+|+.+...|++|++||++.. .+.+.+. | +.. .++++.++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 6899999999999999999999999999998752 2222221 1 222 47889999
Q ss_pred cCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC-CeEEEEeeccCCCCCCCCCccccCC
Q 006212 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKLVQHE 361 (656)
Q Consensus 283 ~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~~L~~~~ 361 (656)
+||+|+.|+|.+.+....+-.+....++++++|++.+++- ...++.+++... ++ .+++.+. |.+..+
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~--~~~~la~~~~~~~~~--ig~h~~~--------p~~~~~ 152 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTL--LPSDLVGYTGRGDKF--LALHFAN--------HVWVNN 152 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHHHHSCGGGE--EEEEECS--------STTTSC
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCC--CHHHHHhhcCCCcce--EEEccCC--------CcccCc
Confidence 9999999999776666655566677799999999665553 445666666542 34 4555542 344567
Q ss_pred cEEEcCCCCC
Q 006212 362 NVTVTPHLGA 371 (656)
Q Consensus 362 nvilTPH~g~ 371 (656)
.+.++||...
T Consensus 153 lvevv~~~~t 162 (283)
T 4e12_A 153 TAEVMGTTKT 162 (283)
T ss_dssp EEEEEECTTS
T ss_pred eEEEEeCCCC
Confidence 7889998533
No 72
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.06 E-value=1.3e-10 Score=120.28 Aligned_cols=109 Identities=14% Similarity=0.156 Sum_probs=89.5
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc--HHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~--~~~ 305 (656)
++|||||+|.||..+|++|...|++|.+||++. ..+...+.|+... ++++++++||+|++|+|..+.++.++. ...
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 479999999999999999999999999999986 3455566687665 899999999999999996556665551 345
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
+..++++.++||++++.....+.+.+.+.+..+
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~ 114 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTARGG 114 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 567899999999999988888888877776544
No 73
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.06 E-value=5.9e-10 Score=123.34 Aligned_cols=152 Identities=20% Similarity=0.253 Sum_probs=110.1
Q ss_pred cceeEE-ecccccCccc-hhhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCC
Q 006212 153 KLKVVG-RAGVGIDNVD-LQAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGK 230 (656)
Q Consensus 153 ~LK~I~-~~g~GvD~iD-~~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gk 230 (656)
+++-++ -..+|+..+. +.+..+..|+|+|+.+..+...-+...+ .. +.+..+-|. ..+..+.||
T Consensus 201 ~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn~yG----t~-------~sl~dgi~r---~tg~~L~GK 266 (488)
T 3ond_A 201 RVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYG----CR-------HSLPDGLMR---ATDVMIAGK 266 (488)
T ss_dssp HCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHHHHH----HH-------HHHHHHHHH---HHCCCCTTC
T ss_pred hcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhhhcc----cc-------HHHHHHHHH---HcCCcccCC
Confidence 344443 3577887753 2334467799999976544432221111 11 112222221 245679999
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhcC
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKM 309 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~m 309 (656)
+++|+|+|.||+.+|++|+++|++|+++|++. ....+...|+...++++++..+|+|+.+. .+.++++.+.+..|
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~at----G~~~vl~~e~l~~m 342 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTT----GNKDIIMLDHMKKM 342 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECS----SCSCSBCHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCC----CChhhhhHHHHHhc
Confidence 99999999999999999999999999999875 33456667888889999999999999764 36778899999999
Q ss_pred CCCcEEEEcCCCc
Q 006212 310 KKGVRIVNVARGG 322 (656)
Q Consensus 310 K~gailINvaRg~ 322 (656)
|++++|+|+|++.
T Consensus 343 k~gaiVvNaG~~~ 355 (488)
T 3ond_A 343 KNNAIVCNIGHFD 355 (488)
T ss_dssp CTTEEEEESSSTT
T ss_pred CCCeEEEEcCCCC
Confidence 9999999999973
No 74
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.06 E-value=1.5e-10 Score=120.83 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=89.4
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee--cCHHHHhccCCEEEEccCCCcccccccc--H
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL--VSFDQALATADFISLHMPLNPTTSKIFN--D 303 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~--~~l~ell~~aDvV~l~~Plt~~T~~li~--~ 303 (656)
.++|||||+|.||..+|++|...|++|.+||++. ..+...+.|... .++++++++||+|++|+|....++.++. +
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 4689999999999999999999999999999886 334555667754 4899999999999999996555555542 3
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
..+..++++.++||+++......+.+.+.+.+..+
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~ 121 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTALNL 121 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 44567899999999999988888888887776544
No 75
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.01 E-value=4.3e-10 Score=116.94 Aligned_cols=107 Identities=19% Similarity=0.261 Sum_probs=88.5
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc--HHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~--~~~ 305 (656)
++|||||+|.||..+|++|...|++|.+||++. ..+.+.+.|+... ++++++++||+|++|+|....++.++. .+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~ 83 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSCG
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchhH
Confidence 689999999999999999999999999999985 3445556687664 899999999999999996655665553 145
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
+..++++.++||++++.....+.+.+.+.+.
T Consensus 84 ~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~ 114 (302)
T 2h78_A 84 LAHIAPGTLVLECSTIAPTSARKIHAAARER 114 (302)
T ss_dssp GGSSCSSCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HhcCCCCcEEEECCCCCHHHHHHHHHHHHHc
Confidence 5678999999999999888878888877764
No 76
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.00 E-value=3.5e-10 Score=116.83 Aligned_cols=165 Identities=18% Similarity=0.221 Sum_probs=117.4
Q ss_pred CCCHhHHHhhcC-----CCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccchhhHHhcCceeecCCCCChhhHHH
Q 006212 118 DLSPEALCEKIS-----QCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNAPIANTVAAAE 192 (656)
Q Consensus 118 ~~~~eel~~~i~-----~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~aa~~~GI~V~n~p~~n~~~vAE 192 (656)
+.+++++.+.+. +++++.+. .+..+++++.+ +.+.-.++...++|.++. +.|- ..|+|++..
T Consensus 48 ~~~~~~l~~~i~~l~~~~~~G~nvt--iP~k~~i~~~l-d~l~~~A~~~gavnti~~----~~g~----~~g~nTd~~-- 114 (275)
T 2hk9_A 48 EINPEELKKAFEGFKALKVKGINVT--VPFKEEIIPLL-DYVEDTAKEIGAVNTVKF----ENGK----AYGYNTDWI-- 114 (275)
T ss_dssp ECCGGGHHHHHHHHHHHTCCEEEEC--TTSTTTTGGGC-SEECHHHHHHTCCCEEEE----ETTE----EEEECCHHH--
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEC--ccCHHHHHHHH-HHhhHHHHHhCCcceEEe----eCCE----EEeecCCHH--
Confidence 456666655442 57788875 46777788776 478888888888998865 3452 235666443
Q ss_pred HHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHHHHc
Q 006212 193 HGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAV 270 (656)
Q Consensus 193 ~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a~~~ 270 (656)
+++.++.| .+.++.|++++|||.|.+|+++|+.|...|++|.++|++... ..+...
T Consensus 115 ---G~~~~l~~-------------------~~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~ 172 (275)
T 2hk9_A 115 ---GFLKSLKS-------------------LIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF 172 (275)
T ss_dssp ---HHHHHHHH-------------------HCTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS
T ss_pred ---HHHHHHHH-------------------hCCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc
Confidence 44444432 134678999999999999999999999889999999987521 122233
Q ss_pred CCeec-CHHHHhccCCEEEEccCCCc--cccccccHHHHhcCCCCcEEEEcCC
Q 006212 271 GVELV-SFDQALATADFISLHMPLNP--TTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 271 g~~~~-~l~ell~~aDvV~l~~Plt~--~T~~li~~~~l~~mK~gailINvaR 320 (656)
|+... +++++++++|+|++|+|... ++...+. +..++++.+++|++.
T Consensus 173 g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 173 PLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCTTSEEEESSS
T ss_pred CCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCCCCEEEEcCC
Confidence 55544 78888999999999999664 2223443 455899999999987
No 77
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.89 E-value=1.1e-09 Score=120.45 Aligned_cols=104 Identities=20% Similarity=0.310 Sum_probs=80.2
Q ss_pred ccccccccccccccCC-CEEEEEecChhHHHHHHHHhcC------CCEEEEECCC-C-ChhHHHHcCCee-----cCHHH
Q 006212 214 AGKWLRSKYVGVSLVG-KTLAVMGFGKVGSEVARRAKGL------GMNVIAHDPY-A-PADKARAVGVEL-----VSFDQ 279 (656)
Q Consensus 214 ~g~W~~~~~~g~~l~g-ktvGIIGlG~IG~~vA~~lk~~------G~~Vi~~d~~-~-~~~~a~~~g~~~-----~~l~e 279 (656)
.|+|... .....|.| |+|||||+|+||+++|+.|+.. |++|++.++. . ..+.+.+.|+.. .++++
T Consensus 39 ~~~w~~~-~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aE 117 (525)
T 3fr7_A 39 GGRNLFP-LLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWE 117 (525)
T ss_dssp CCGGGGG-GHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHH
T ss_pred ccccccc-cChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHH
Confidence 3455532 12457999 9999999999999999999987 9998865443 3 566778889864 58999
Q ss_pred HhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 280 ALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 280 ll~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
++++||+|++++|.... ..++. +.+..||+|++|+ .+.|
T Consensus 118 Aa~~ADVVILaVP~~~~-~eVl~-eI~p~LK~GaILs-~AaG 156 (525)
T 3fr7_A 118 TVSGSDLVLLLISDAAQ-ADNYE-KIFSHMKPNSILG-LSHG 156 (525)
T ss_dssp HHHHCSEEEECSCHHHH-HHHHH-HHHHHSCTTCEEE-ESSS
T ss_pred HHhcCCEEEECCChHHH-HHHHH-HHHHhcCCCCeEE-EeCC
Confidence 99999999999996554 34665 6788899999964 4455
No 78
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=98.89 E-value=2.6e-09 Score=118.81 Aligned_cols=120 Identities=16% Similarity=0.191 Sum_probs=94.1
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHc---CCe---ecCHHHHhc---cCCEEEEccCCCcccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV---GVE---LVSFDQALA---TADFISLHMPLNPTTS 298 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~---g~~---~~~l~ell~---~aDvV~l~~Plt~~T~ 298 (656)
.++|||||+|.||..+|++|...|++|.+||++.. .+.+.+. +.. ..+++++++ ++|+|++++|..+.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 83 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVD 83 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHH
Confidence 35799999999999999999999999999999863 3333333 222 248888887 5999999999766677
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEE 349 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~E 349 (656)
.++ .+....|++|.+|||++++...+...+.+.+.+..+.....-|++.+
T Consensus 84 ~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~ 133 (484)
T 4gwg_A 84 DFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGE 133 (484)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHH
T ss_pred HHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCH
Confidence 766 56677899999999999999888888888887765544444566655
No 79
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.89 E-value=1.9e-09 Score=111.67 Aligned_cols=107 Identities=15% Similarity=0.279 Sum_probs=85.9
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc--HHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~--~~~ 305 (656)
++|+|||+|.||+.+|+.|...|++|.+||++. ..+...+.|+... +++++++++|+|++|+|....+..++. ++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 489999999999999999999999999999875 2344455577654 799999999999999996555555552 234
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
...++++++|||++.+...+.+.+.+.+...
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4668999999999998877778888877764
No 80
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=98.87 E-value=1.4e-09 Score=110.32 Aligned_cols=101 Identities=20% Similarity=0.241 Sum_probs=66.3
Q ss_pred ccccccccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh---------------hH-HHHcC-CeecCHH
Q 006212 216 KWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA---------------DK-ARAVG-VELVSFD 278 (656)
Q Consensus 216 ~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~---------------~~-a~~~g-~~~~~l~ 278 (656)
+|....+...++.+++|||||+|.||+.+|++|...|++|++||++... .. +...+ ....++.
T Consensus 6 ~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (245)
T 3dtt_A 6 IHHHHHHENLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFA 85 (245)
T ss_dssp -------------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHH
T ss_pred ccccccccccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHH
Confidence 3444445678999999999999999999999999999999999987532 11 11223 3445899
Q ss_pred HHhccCCEEEEccCCCccccccccHHH-HhcCCCCcEEEEcC
Q 006212 279 QALATADFISLHMPLNPTTSKIFNDET-FAKMKKGVRIVNVA 319 (656)
Q Consensus 279 ell~~aDvV~l~~Plt~~T~~li~~~~-l~~mK~gailINva 319 (656)
+++++||+|++|+|... ....+. +. ...+ ++.+|||++
T Consensus 86 e~~~~aDvVilavp~~~-~~~~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 86 DVAAGAELVVNATEGAS-SIAALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp HHHHHCSEEEECSCGGG-HHHHHH-HHCHHHH-TTSEEEECC
T ss_pred HHHhcCCEEEEccCcHH-HHHHHH-Hhhhhhc-CCCEEEECC
Confidence 99999999999999543 233332 11 2234 899999999
No 81
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.85 E-value=3.9e-09 Score=117.47 Aligned_cols=112 Identities=15% Similarity=0.144 Sum_probs=88.0
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHc----CCeec-CHHHHhcc---CCEEEEccCCCcc
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV----GVELV-SFDQALAT---ADFISLHMPLNPT 296 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~----g~~~~-~l~ell~~---aDvV~l~~Plt~~ 296 (656)
.+..++|||||+|.||+.+|++|...|++|.+||++.. .+...+. |+... ++++++++ +|+|++++|..+.
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~ 91 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAG 91 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHH
Confidence 45677899999999999999999999999999998752 2333332 66544 89998887 9999999997667
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 297 TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 297 T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
++.++ ++....+++|.+|||++.|...+...+.+.+.+..+
T Consensus 92 v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~ 132 (480)
T 2zyd_A 92 TDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGF 132 (480)
T ss_dssp HHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCC
Confidence 77777 455677899999999999988777778777776433
No 82
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.84 E-value=2e-08 Score=106.09 Aligned_cols=131 Identities=17% Similarity=0.110 Sum_probs=88.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHH-----------HcC--------------Cee-cCHHHHh
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-----------AVG--------------VEL-VSFDQAL 281 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~-----------~~g--------------~~~-~~l~ell 281 (656)
-++|||||.|.||.++|..+...|++|.+||++.. .+.+. +.| +.. .++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~eav 85 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHHH
Confidence 36899999999999999999999999999999752 22221 123 223 3799999
Q ss_pred ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC-CeEEEEeeccCCCCCCCCCccccC
Q 006212 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG-VVAQAALDVFTEEPPAKDSKLVQH 360 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g-~i~gA~lDV~~~EP~~~~~~L~~~ 360 (656)
++||+|+.|+|...+.+..+-.+....++++++|++++++- ....+.+.+... ++ .+.+.+. |+. . .
T Consensus 86 ~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i--~~~~la~~~~~~~r~--ig~Hp~~--P~~-~-----~ 153 (319)
T 2dpo_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAHVKQC--IVAHPVN--PPY-Y-----I 153 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTTGGGE--EEEEECS--STT-T-----C
T ss_pred hcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCCh--HHHHHHHhcCCCCCe--EEeecCC--chh-h-----c
Confidence 99999999999765554434355566789999998776653 345666665432 34 4445443 332 2 3
Q ss_pred CcEEEcCCCCC
Q 006212 361 ENVTVTPHLGA 371 (656)
Q Consensus 361 ~nvilTPH~g~ 371 (656)
+-+.++|+-.+
T Consensus 154 ~lveiv~g~~t 164 (319)
T 2dpo_A 154 PLVELVPHPET 164 (319)
T ss_dssp CEEEEEECTTC
T ss_pred ceEEEeCCCCC
Confidence 34667776433
No 83
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.83 E-value=3e-09 Score=109.97 Aligned_cols=106 Identities=18% Similarity=0.312 Sum_probs=82.5
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccH--HH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND--ET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~--~~ 305 (656)
++|||||+|.||+.+|++|...|++|.+||++.. .+...+.|+... +++++++++|+|++|+|....++.++.. ..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 3699999999999999999999999999999763 344455677654 7999999999999999966566665533 23
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
+..++++.++||++...+.+.+.+.+.+.+
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 456899999999887776666666665654
No 84
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.83 E-value=3.4e-09 Score=109.74 Aligned_cols=107 Identities=18% Similarity=0.251 Sum_probs=85.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc--HHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN--DET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~--~~~ 305 (656)
++|||||+|.||+.+|+.|...|++|.+||++.. .+...+.|+... +++++++++|+|++|+|....++.++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5899999999999999999989999999998752 333444477654 799999999999999996655666653 244
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
...++++.+||++++|...+.+.+.+.+.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp HHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 5668999999999988766677787777653
No 85
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.83 E-value=1.2e-08 Score=106.54 Aligned_cols=127 Identities=17% Similarity=0.189 Sum_probs=86.2
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHc-------CCeec-CHHHHhccCCEEEEccCCCccc
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAV-------GVELV-SFDQALATADFISLHMPLNPTT 297 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~-------g~~~~-~l~ell~~aDvV~l~~Plt~~T 297 (656)
-+.|+|||||+|.||++||+.+. .|++|++||++. ..+.+.+. ++... ++++ +++||+|+.|+|...+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~v 87 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNT 87 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHH
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHH
Confidence 35789999999999999999999 999999999986 33444444 45443 6766 89999999999988766
Q ss_pred cccccHHHHhcCCCCcEEE-EcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCC
Q 006212 298 SKIFNDETFAKMKKGVRIV-NVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHL 369 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailI-NvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~ 369 (656)
+..+-.+ +..+ ++++++ |++.-.+ ..+.+.+.. .....|++.|. |.. . .+-+.++|+-
T Consensus 88 k~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~~-~~r~~G~Hf~~--Pv~-~-----~~lveiv~g~ 146 (293)
T 1zej_A 88 KVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLDS-PSRFLGVHWMN--PPH-V-----MPLVEIVISR 146 (293)
T ss_dssp HHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSSC-GGGEEEEEECS--STT-T-----CCEEEEEECT
T ss_pred HHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhhc-ccceEeEEecC--ccc-c-----CCEEEEECCC
Confidence 6554333 5667 998884 8876544 344443432 12235556555 432 2 3455577754
No 86
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.83 E-value=2.9e-08 Score=109.64 Aligned_cols=167 Identities=14% Similarity=0.128 Sum_probs=106.0
Q ss_pred CCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccc----cccccc-CCCEEEEEecChhHHHHHHHHhcCCCEEE
Q 006212 182 APIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSK----YVGVSL-VGKTLAVMGFGKVGSEVARRAKGLGMNVI 256 (656)
Q Consensus 182 ~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~----~~g~~l-~gktvGIIGlG~IG~~vA~~lk~~G~~Vi 256 (656)
..|-|-..|.|.+.+.++. +....++|.... +..... .=++|||||.|.||..||..+...|++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~---------a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~ 81 (460)
T 3k6j_A 11 STGENLYFQGSEVRSYLME---------AHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETF 81 (460)
T ss_dssp TTSGGGGGCBCHHHHHHHH---------TTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ccccchhhhhHHHHHHHHh---------HHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 3455666777777777776 223346787541 211111 22689999999999999999999999999
Q ss_pred EECCCCCh---------hHHHHcCC-------------ee-cCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCc
Q 006212 257 AHDPYAPA---------DKARAVGV-------------EL-VSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGV 313 (656)
Q Consensus 257 ~~d~~~~~---------~~a~~~g~-------------~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~ga 313 (656)
+||++... +.+.+.|. .. .+++ .+++||+|+.|+|...+.+..+-.+....+++++
T Consensus 82 l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~a 160 (460)
T 3k6j_A 82 LVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMKLKKELFANLENICKSTC 160 (460)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTC
T ss_pred EEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCC
Confidence 99987531 11223332 22 3564 6899999999999766555444455666789999
Q ss_pred EEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCC
Q 006212 314 RIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHL 369 (656)
Q Consensus 314 ilINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~ 369 (656)
+|++.+++ +....+.+.+... -...+++.|. |.+ .-+| +.++|+.
T Consensus 161 IlasnTSs--l~i~~ia~~~~~p-~r~iG~Hffn--Pv~-~m~L-----vEIv~g~ 205 (460)
T 3k6j_A 161 IFGTNTSS--LDLNEISSVLRDP-SNLVGIHFFN--PAN-VIRL-----VEIIYGS 205 (460)
T ss_dssp EEEECCSS--SCHHHHHTTSSSG-GGEEEEECCS--STT-TCCE-----EEEECCS
T ss_pred EEEecCCC--hhHHHHHHhccCC-cceEEEEecc--hhh-hCCE-----EEEEeCC
Confidence 99654444 2335565555432 2235667666 432 2344 5566653
No 87
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.82 E-value=3.4e-09 Score=109.35 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=84.0
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccH--HH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFND--ET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~--~~ 305 (656)
++|||||+|.||+.+|+.|...|++|.+|| +. ..+...+.|+.. .+++++++++|+|++|+|....+..++.. ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 489999999999999999999999999999 65 334444557654 37999999999999999965545555431 33
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
...++++.+||+++.+...+.+.+.+.+.+.
T Consensus 83 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp TTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 4568999999999999877778888877764
No 88
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.81 E-value=4.6e-09 Score=107.93 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=83.0
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~ 308 (656)
++|+|||+|.||..+|+.|.. |++|.+||++.. .+...+.|+...+++++++++|+|++|+|....+..++ ++....
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~-~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVA-EALYPY 79 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHH-HHHTTT
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHH-HHHHhh
Confidence 479999999999999999999 999999998763 33344446654457788899999999999554455555 444566
Q ss_pred CCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 309 MKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 309 mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
++++.+++|++.+...+.+.+.+.+.+.
T Consensus 80 l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 80 LREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp CCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 8999999999998877778888877764
No 89
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.30 E-value=5e-10 Score=110.62 Aligned_cols=93 Identities=16% Similarity=0.247 Sum_probs=75.2
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
+.+++|||||+|.||+.+|++|...|++|.+||++...+.....|+...+++++++++|+|++|+|.. .+..++ .+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~aDvVilav~~~-~~~~v~---~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVLCYSEAASRSDVIVLAVHRE-HYDFLA---EL 92 (201)
Confidence 67889999999999999999999999999999987543333334665557888999999999999954 566665 24
Q ss_pred hcCCCCcEEEEcCCCch
Q 006212 307 AKMKKGVRIVNVARGGV 323 (656)
Q Consensus 307 ~~mK~gailINvaRg~i 323 (656)
..++++.+|||+++|-.
T Consensus 93 ~~~~~~~ivI~~~~G~~ 109 (201)
T 2yjz_A 93 ADSLKGRVLIDVSNNQK 109 (201)
Confidence 55778999999999864
No 90
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.79 E-value=1.3e-08 Score=113.80 Aligned_cols=107 Identities=14% Similarity=0.203 Sum_probs=86.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-----cCCeec-CHHHHhcc---CCEEEEccCCCcccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-----VGVELV-SFDQALAT---ADFISLHMPLNPTTS 298 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-----~g~~~~-~l~ell~~---aDvV~l~~Plt~~T~ 298 (656)
.++|||||+|.||+.+|++|...|++|.+||++.. .+...+ .|+... +++++++. +|+|++++|....++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 45899999999999999999999999999999863 333443 355543 79998877 999999999666677
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
.++ ++....+++|.+|||++.+...+...+.+.+.+.
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~ 126 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKK 126 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred HHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHc
Confidence 777 4566778999999999998887777787777664
No 91
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.78 E-value=7.9e-09 Score=108.08 Aligned_cols=106 Identities=16% Similarity=0.203 Sum_probs=84.0
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccH--HH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND--ET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~--~~ 305 (656)
++|||||+|.||+.+|+.|...|++|.+||++. ..+...+.|+... +++++++++|+|++|+|....++.++.. ..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 679999999999999999999999999999875 3344555677654 7889999999999999965555554432 13
Q ss_pred HhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 306 FAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
+..++++.+|||++++.....+.+.+.+..
T Consensus 111 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~ 140 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTVDADTVTELAQVIVS 140 (316)
T ss_dssp GGGCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 456899999999998877667777777754
No 92
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.76 E-value=1.1e-08 Score=104.06 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=79.0
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC---hhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP---ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~---~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
++|||||+|.||+.+|++|...|++|++||+... .+...+.|+. .++++++++||+|++|+|.......+ .+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~--~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAA--RRAG 77 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHH--HHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHH--HHHH
Confidence 3799999999999999999999999999988422 2333445776 77889999999999999965444443 3455
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 307 AKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 307 ~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
..+++ ++||++.+...+.+.+.+.+...
T Consensus 78 ~~~~~--~vi~~s~~~~~~~~~l~~~~~~~ 105 (264)
T 1i36_A 78 RHVRG--IYVDINNISPETVRMASSLIEKG 105 (264)
T ss_dssp TTCCS--EEEECSCCCHHHHHHHHHHCSSS
T ss_pred HhcCc--EEEEccCCCHHHHHHHHHHHhhC
Confidence 56776 99999888777777787777653
No 93
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.71 E-value=2.5e-08 Score=110.81 Aligned_cols=117 Identities=11% Similarity=0.137 Sum_probs=88.3
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHc----CCee-cCHHHHhcc---CCEEEEccCCCcccccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV----GVEL-VSFDQALAT---ADFISLHMPLNPTTSKI 300 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~----g~~~-~~l~ell~~---aDvV~l~~Plt~~T~~l 300 (656)
++|||||+|.||+.+|+++...|++|.+||++.. .+...+. |+.. .+++++++. +|+|++|+|....+..+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 5799999999999999999999999999998752 2333332 5554 379998876 99999999966566666
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccC
Q 006212 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFT 347 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~ 347 (656)
+ ++....+++|.+|||++.+...+...+.+.+.+..+.....-+++
T Consensus 86 l-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g 131 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSG 131 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECS
T ss_pred H-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCC
Confidence 6 345567899999999999987777788777776434333334443
No 94
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.70 E-value=2.8e-08 Score=110.69 Aligned_cols=118 Identities=15% Similarity=0.148 Sum_probs=88.7
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-----cCCee-cCHHHHhc---cCCEEEEccCCCccccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-----VGVEL-VSFDQALA---TADFISLHMPLNPTTSK 299 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-----~g~~~-~~l~ell~---~aDvV~l~~Plt~~T~~ 299 (656)
++|||||+|.||+.+|++|...|++|.+||++.. .+...+ .|+.. .+++++++ ++|+|++|+|....+..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 4799999999999999999999999999999763 333444 45654 37888874 89999999996656676
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCC
Q 006212 300 IFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTE 348 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~ 348 (656)
++. +....+++|.+|||++.|...+...+.+.+.+..+...+.-+++.
T Consensus 83 vl~-~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~ 130 (482)
T 2pgd_A 83 FIE-KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGG 130 (482)
T ss_dssp HHH-HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESH
T ss_pred HHH-HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCC
Confidence 663 455678999999999998877777777777654333233344443
No 95
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.67 E-value=4.2e-08 Score=105.40 Aligned_cols=106 Identities=21% Similarity=0.283 Sum_probs=84.3
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHHHHcCCeecCHHHHhc-cCCEEEEccCCCcccccccc
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVGVELVSFDQALA-TADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g~~~~~l~ell~-~aDvV~l~~Plt~~T~~li~ 302 (656)
+|.||||+|+|+|+||+.+|++|.++|++|+++|++... +.+.+.|...++.++++. +||+++.|. +.++++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-----~~~~I~ 244 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-----LGAVLN 244 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-----CSCCBS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-----hHHHhC
Confidence 799999999999999999999999999999999987521 233445777778888877 999999874 566788
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
.+.++.|+ ..+|++.+++.+.++++ .+.|+++.+
T Consensus 245 ~~~~~~lg-~~iV~e~An~p~t~~ea-~~~L~~~Gi 278 (364)
T 1leh_A 245 DFTIPQLK-AKVIAGSADNQLKDPRH-GKYLHELGI 278 (364)
T ss_dssp TTHHHHCC-CSEECCSCSCCBSSHHH-HHHHHHHTC
T ss_pred HHHHHhCC-CcEEEeCCCCCcccHHH-HHHHHhCCC
Confidence 88888884 56889999999877553 345665444
No 96
>2iaf_A Hypothetical protein SDHL; MCSG, PSI2, MAD, structural genomics, L-serine dehydratase, structure initiative; 2.05A {Legionella pneumophila} SCOP: d.81.2.1 PDB: 2iqq_A
Probab=98.67 E-value=1.5e-08 Score=95.49 Aligned_cols=110 Identities=9% Similarity=-0.055 Sum_probs=77.9
Q ss_pred HHHHHhHHHHHhhcCC---CCceEEEEEEeecCCCCCcccccccHHHHHHhhhhhhhcccc----------ccch--HhH
Q 006212 420 LAKKLGRLAVQLVSGG---SGIKSVKLIYRSARDPDDLDTRILRAMITKGIIEPISASFIN----------LVNA--DFT 484 (656)
Q Consensus 420 laerlG~l~~qL~~g~---~~~k~i~i~~~Gs~a~~~~~~~~~~~a~l~GlL~~~~~~~vn----------~vNA--~~i 484 (656)
-+.|+|+++++++... ..+++|++.++||++ .++++|++|+|++.||++ +..++++ +.++ +.+
T Consensus 12 Gpmraa~~f~~~l~~~~~l~~~~~v~v~LyGSla-~TgkGHgTD~Aii~GL~G-~~pd~~~~~~~~~~~~~i~~~~~l~l 89 (151)
T 2iaf_A 12 GPMLAANAFLQLLEQKNLFDKTQRVKVELYGSLA-LTGKGHGTDKAILNGLEN-KAPETVDPASMIPRMHEILDSNLLNL 89 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTCCEEEEEEEHHHH-HTCTTSSHHHHHHHHTTT-CCCC-----CHHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHhhccccCCCcEEEEEEEchHH-hhCCCccccHHHHhhhcC-CCCCccChhhhHHHHHHHHhcCcccc
Confidence 3468888888888521 158999999999999 999999999999999994 4445565 4444 446
Q ss_pred hhccCceEE------EEEeecCCCCCCCCceEEEEEEecccccceecCCCcE-EEEEEEEEC-CeeE
Q 006212 485 AKQKGLRIS------EERVVADSSPEFPIDSIQVQLSNVDSKFAAAVSENGE-ISIEGKVKF-GIPH 543 (656)
Q Consensus 485 Ake~GI~v~------~~~~~~~~~~~~~~ntv~i~l~~~~~~~~~~~~~~~~-~~v~Gt~~g-G~~r 543 (656)
|++++|.+. |..... ...|||++++++.+ .++.. .++.+.|+| |.++
T Consensus 90 a~~~~i~f~~~~di~f~~~~~---lp~HpN~m~~~a~~---------~~g~~l~~~~~ySIGGGfI~ 144 (151)
T 2iaf_A 90 AGKKEIPFHEATDFLFLQKEL---LPKHSNGMRFSAFD---------GNANLLIEQVYYSIGGGFIT 144 (151)
T ss_dssp TTTEEEECCHHHHEEEETTCC---CSSCSSEEEEEEEC---------TTSCEEEEEEEEECSSSCEE
T ss_pred CCcceeEEccccceeEcCCCC---CCCCCCeeEEEEEe---------CCCCEEEEEEEEEeCCceEE
Confidence 888887764 322211 12699999999983 34443 589999998 5553
No 97
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.66 E-value=4.8e-07 Score=96.94 Aligned_cols=180 Identities=14% Similarity=0.157 Sum_probs=114.1
Q ss_pred CCeEEEEcCCCCCCHHHHHhcCCcceeEEecccccCccchhhHHhcCceeecC---CCCC-----hhhHHHHH--HHHHH
Q 006212 130 QCDALIVRSGTKVTRSVFEAANGKLKVVGRAGVGIDNVDLQAATEFGCLVVNA---PIAN-----TVAAAEHG--IALLA 199 (656)
Q Consensus 130 ~~d~liv~~~~~v~~e~l~~~~~~LK~I~~~g~GvD~iD~~aa~~~GI~V~n~---p~~n-----~~~vAE~~--lal~L 199 (656)
++|+|+- ...+...+. ....+++.++......++.-.++++.++|+...|. |.-. -.++++.+ ++.++
T Consensus 66 ~ad~i~~-vksP~~~~~-~~~~~g~~~~~y~~~~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~ 143 (361)
T 1pjc_A 66 SREMVVK-VKEPLPAEY-DLMQKDQLLFTYLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQF 143 (361)
T ss_dssp TSSEEEC-SSCCCGGGG-GGCCTTCEEEECCCGGGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHH
T ss_pred cCCeEEE-ECCCCHHHH-HhhcCCCEEEEEeccccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHH
Confidence 6898663 333443332 22234666666655666665678888999888753 4321 12344333 34444
Q ss_pred HHHhchhHHHHHHHccc--cccccccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee--
Q 006212 200 SMARNVSQADASIKAGK--WLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-- 274 (656)
Q Consensus 200 ~~~R~i~~~~~~~~~g~--W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~-- 274 (656)
++. |+... ..|+ +-. .. ..+.++++.|+|.|.+|+.+++.++.+|++|+++|++. ..+.+.+.+...
T Consensus 144 gA~-nt~~~----~~g~G~~l~-~l--~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~ 215 (361)
T 1pjc_A 144 GAR-FLERQ----QGGRGVLLG-GV--PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVE 215 (361)
T ss_dssp HHH-HTSGG----GTSCCCCTT-CB--TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSE
T ss_pred HHH-HHhhc----cCCCceecc-CC--CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeE
Confidence 432 22111 1221 101 01 24778999999999999999999999999999999875 233343333211
Q ss_pred ------cCHHHHhccCCEEEEccCCCc-cccccccHHHHhcCCCCcEEEEcC
Q 006212 275 ------VSFDQALATADFISLHMPLNP-TTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 275 ------~~l~ell~~aDvV~l~~Plt~-~T~~li~~~~l~~mK~gailINva 319 (656)
.++.+.+..+|+|+.|++... .+..++.+..++.||++.+++|++
T Consensus 216 ~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 216 LLYSNSAEIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp EEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred eeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 145667789999999997533 234556788899999999999997
No 98
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.63 E-value=4.2e-08 Score=109.13 Aligned_cols=117 Identities=13% Similarity=0.188 Sum_probs=87.2
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHH-HcC-------Cee-cCHHHHhcc---CCEEEEccCCCccc
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-AVG-------VEL-VSFDQALAT---ADFISLHMPLNPTT 297 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~-~~g-------~~~-~~l~ell~~---aDvV~l~~Plt~~T 297 (656)
+|||||+|.||+.+|++|...|++|.+||++.. .+... ..| +.. .+++++++. +|+|++|+|....+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v 82 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHH
Confidence 699999999999999999999999999998752 22222 225 433 378888874 99999999965566
Q ss_pred cccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTE 348 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~ 348 (656)
..++ ++....+++|.+|||++.|...+.+.+.+.+.+..+...+.-+++.
T Consensus 83 ~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg 132 (478)
T 1pgj_A 83 DSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGG 132 (478)
T ss_dssp HHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESH
T ss_pred HHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCC
Confidence 6666 4455678999999999998877777787778764343333344443
No 99
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.63 E-value=1.9e-08 Score=102.41 Aligned_cols=101 Identities=12% Similarity=0.178 Sum_probs=75.1
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHhcCCCE-EEEECCCCC-hhHH-HHcCCeec-CHHHHhccCCEEEEccCCCcccc
Q 006212 223 VGVSLVGKTLAVMGFGKVGSEVARRAKGLGMN-VIAHDPYAP-ADKA-RAVGVELV-SFDQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~-Vi~~d~~~~-~~~a-~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~ 298 (656)
+..++.+++|||||+|.||+.+|+.+...|++ |.+||++.. .+.. ...|+... +++++++++|+|++|+|.. ...
T Consensus 4 m~~~~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~ 82 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFA 82 (266)
T ss_dssp ---CGGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHH
T ss_pred hhcCCCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHH
Confidence 34456678999999999999999999988998 899998752 2223 33377654 7889999999999999944 334
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhc
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~ivd 325 (656)
.++ ++....+++++++++++.|...+
T Consensus 83 ~v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 83 ELL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp HHH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred HHH-HHHHhhcCCCcEEEECCCCCchH
Confidence 444 33445688999999999886643
No 100
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.61 E-value=3e-08 Score=102.40 Aligned_cols=91 Identities=22% Similarity=0.406 Sum_probs=72.7
Q ss_pred CEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHh
Q 006212 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (656)
Q Consensus 230 ktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~ 307 (656)
++|+|||+ |.||+.+|+.|...|++|.+||++. ..+.+.+.|+...++.+++++||+|++|+|... +..++ .+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~-~~~v~-~~l~~ 89 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNI-IEKVA-EDIVP 89 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHH-HHHHH-HHHGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchH-HHHHH-HHHHH
Confidence 58999999 9999999999999999999999875 234444567665677888999999999999443 45554 34445
Q ss_pred cCCCCcEEEEcCCCc
Q 006212 308 KMKKGVRIVNVARGG 322 (656)
Q Consensus 308 ~mK~gailINvaRg~ 322 (656)
.++++++|||++.|.
T Consensus 90 ~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 90 RVRPGTIVLILDAAA 104 (286)
T ss_dssp GSCTTCEEEESCSHH
T ss_pred hCCCCCEEEECCCCc
Confidence 689999999988765
No 101
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.60 E-value=8.8e-08 Score=106.15 Aligned_cols=134 Identities=16% Similarity=0.172 Sum_probs=89.8
Q ss_pred CEEEEEecChhHHHHHHHHhcC--CCEEEEECCCCCh-hHH---------------HH----cCCee-cCHHHHhccCCE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYAPA-DKA---------------RA----VGVEL-VSFDQALATADF 286 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~--G~~Vi~~d~~~~~-~~a---------------~~----~g~~~-~~l~ell~~aDv 286 (656)
++|+|||+|.||..+|..|... |++|++||++... +.. .. .++.. .++++.+++||+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDv 85 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADL 85 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCE
Confidence 5899999999999999999877 8999999987421 111 11 23443 378889999999
Q ss_pred EEEccCCCccccccc-------------cHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEee---ccCCCC
Q 006212 287 ISLHMPLNPTTSKIF-------------NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALD---VFTEEP 350 (656)
Q Consensus 287 V~l~~Plt~~T~~li-------------~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lD---V~~~EP 350 (656)
|++|+|......+.+ -+.....|++++++||+++..+-..+.+.+.+++... .++| .+..|+
T Consensus 86 ViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~--~~~d~~V~~~Pe~ 163 (467)
T 2q3e_A 86 VFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTK--PNLNLQVLSNPEF 163 (467)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCC--TTCEEEEEECCCC
T ss_pred EEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCC--CCCCeEEEeCHHH
Confidence 999999443332211 1234456899999999998777667777777766432 1122 355555
Q ss_pred CCCCC---ccccCCcEEE
Q 006212 351 PAKDS---KLVQHENVTV 365 (656)
Q Consensus 351 ~~~~~---~L~~~~nvil 365 (656)
..... .++..+++++
T Consensus 164 ~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 164 LAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCTTSHHHHHHSCSCEEE
T ss_pred hhcccchhhccCCCEEEE
Confidence 43332 2455666754
No 102
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.59 E-value=3.4e-08 Score=98.07 Aligned_cols=94 Identities=14% Similarity=0.227 Sum_probs=71.8
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
.+++|+|||+|.||+.+|+.+...|++|.++|++.. .+...+.|+...+++++++++|+|++|+|. .....++. +
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~-~~~~~v~~---l 102 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFR-EHYSSLCS---L 102 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCG-GGSGGGGG---G
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCCh-HHHHHHHH---H
Confidence 457899999999999999999999999999998742 223333466666888999999999999994 44555553 3
Q ss_pred hcCCCCcEEEEcCCCchhc
Q 006212 307 AKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 307 ~~mK~gailINvaRg~ivd 325 (656)
..+.+++++||+++|.-.+
T Consensus 103 ~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 103 SDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp HHHHTTCEEEECCCCCHHH
T ss_pred HHhcCCCEEEEeCCCcccc
Confidence 3333899999999987543
No 103
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.52 E-value=3e-07 Score=100.88 Aligned_cols=115 Identities=15% Similarity=0.113 Sum_probs=80.2
Q ss_pred ccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHH------------------cCCee-cCHHHHh
Q 006212 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA------------------VGVEL-VSFDQAL 281 (656)
Q Consensus 222 ~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~------------------~g~~~-~~l~ell 281 (656)
.++++..-++|+|||+|.||..+|..|.. |++|++||+.... +...+ .++.. .++++.+
T Consensus 29 ~~~r~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~ 107 (432)
T 3pid_A 29 QMGRGSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY 107 (432)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH
T ss_pred ccccccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH
Confidence 35667777899999999999999999988 9999999987522 22111 12333 3788999
Q ss_pred ccCCEEEEccCCCccc-------ccccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 282 ATADFISLHMPLNPTT-------SKIFN--DETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T-------~~li~--~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
++||+|++|+|...+. ..+.. +.... |++|+++|+.+...+-..+.+.+.+.+..+
T Consensus 108 ~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v 172 (432)
T 3pid_A 108 RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV 172 (432)
T ss_dssp TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE
T ss_pred hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE
Confidence 9999999999954211 12221 33455 899999999998777667788777776544
No 104
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.52 E-value=1.2e-07 Score=93.72 Aligned_cols=81 Identities=15% Similarity=0.292 Sum_probs=61.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccH
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
..++.+++|+|||+|.||+.+|+.|...|++|.+||++.. .+++||+|++|+| .+.+..++.
T Consensus 14 ~~~~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~----------------~~~~aD~vi~av~-~~~~~~v~~- 75 (209)
T 2raf_A 14 NLYFQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ----------------ATTLGEIVIMAVP-YPALAALAK- 75 (209)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC----------------CSSCCSEEEECSC-HHHHHHHHH-
T ss_pred ccccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH----------------HhccCCEEEEcCC-cHHHHHHHH-
Confidence 4578899999999999999999999999999999998743 4678999999999 555665553
Q ss_pred HHHhcCCCCcEEEEcCCCch
Q 006212 304 ETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~i 323 (656)
+....++ +++++|+++|--
T Consensus 76 ~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 76 QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp HTHHHHT-TSEEEECCCCBC
T ss_pred HHHHhcC-CCEEEEECCCCC
Confidence 2334567 999999998653
No 105
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.52 E-value=9.9e-07 Score=91.74 Aligned_cols=114 Identities=15% Similarity=0.139 Sum_probs=75.8
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHH-----------HHcC------------------Cee-cCHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKA-----------RAVG------------------VEL-VSFD 278 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a-----------~~~g------------------~~~-~~l~ 278 (656)
++|+|||.|.||..+|..+...|++|++||++.. .+.+ .+.| +.. .+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999988999999998742 2211 1122 222 3788
Q ss_pred HHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeeccC
Q 006212 279 QALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFT 347 (656)
Q Consensus 279 ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~~ 347 (656)
+.+++||+|++++|...+.+..+-.+....++++++|+....+- ....+.+.+.. .++ .+.+.+.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~~~--~g~h~~~ 161 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQDRF--AGLHFFN 161 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEECS
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCcccE--EEEecCC
Confidence 88999999999999654333222233444578899988655443 33455555543 234 4445443
No 106
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.52 E-value=1.7e-07 Score=86.76 Aligned_cols=87 Identities=16% Similarity=0.186 Sum_probs=69.1
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHHHHcCCee---cCHHHHhccCCEEEEccCCCccccccccH
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVGVEL---VSFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g~~~---~~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
|++++|||.|.||+.+++.|+.+|++|.++|++... ..+.+.+... .+++++++++|+|+.|+|.. ..++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~---~~~~~~ 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSK---TPIVEE 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCS---SCSBCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCC---CcEeeH
Confidence 899999999999999999999999999999987522 2345556542 37889999999999999955 234443
Q ss_pred HHHhcCCCCcEEEEcCCC
Q 006212 304 ETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg 321 (656)
..+++|.+++|++..
T Consensus 98 ---~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 ---RSLMPGKLFIDLGNP 112 (144)
T ss_dssp ---GGCCTTCEEEECCSS
T ss_pred ---HHcCCCCEEEEccCC
Confidence 447889999999853
No 107
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.46 E-value=1.7e-07 Score=94.73 Aligned_cols=102 Identities=20% Similarity=0.295 Sum_probs=74.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC----EEEEECCCCC-hhHH-HHcCCeec-CHHHHhccCCEEEEccCCCcccccccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM----NVIAHDPYAP-ADKA-RAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~----~Vi~~d~~~~-~~~a-~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~ 302 (656)
++|||||+|+||+.+|+.+...|+ +|.+||++.. .+.. .+.|+... ++++++++||+|++|+| ......++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~-~~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIK-PDLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSC-TTTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeC-HHHHHHHH-
Confidence 589999999999999999999998 9999999752 2333 34587765 89999999999999997 33344444
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
++....++++.++|.+..|- ..+.+.+.+..
T Consensus 81 ~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 81 NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ---CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 33444578898888765443 34455555544
No 108
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.46 E-value=5.4e-07 Score=93.16 Aligned_cols=109 Identities=14% Similarity=0.172 Sum_probs=79.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC---EEEEECCCCC-hhHHHH-cCCeec-CHHHHhccCCEEEEccCCCcccccccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM---NVIAHDPYAP-ADKARA-VGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~---~Vi~~d~~~~-~~~a~~-~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~ 302 (656)
.++|||||+|+||+.+|+.+...|+ +|.+||++.. .+...+ .|+... +..+++++||+|++|+|. .....++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4789999999999999999998888 8999999863 333333 487765 889999999999999983 3334444
Q ss_pred HHHHhc-CCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEE
Q 006212 303 DETFAK-MKKGVRIVNVARGGVIDEEALVRALDS-GVVAQA 341 (656)
Q Consensus 303 ~~~l~~-mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA 341 (656)
++.-.. ++++++||.+..|- ..+.+.+.+.. .++.++
T Consensus 81 ~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~~~~vvr~ 119 (280)
T 3tri_A 81 EELKDILSETKILVISLAVGV--TTPLIEKWLGKASRIVRA 119 (280)
T ss_dssp HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTCCSSEEEE
T ss_pred HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCCCCeEEEE
Confidence 233334 68888888887553 34566666665 355443
No 109
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.45 E-value=2.3e-07 Score=97.67 Aligned_cols=103 Identities=18% Similarity=0.295 Sum_probs=77.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCC----CEEEEECCCCC---hhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLG----MNVIAHDPYAP---ADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKI 300 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G----~~Vi~~d~~~~---~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~l 300 (656)
.++|||||+|.||..+|..|...| .+|.+||+... .+...+.|+... +..+++++||+|++|+| ......+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~v 100 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPFI 100 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHHH
Confidence 457999999999999999999888 79999998763 344456688765 78899999999999999 4445555
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 301 FNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
+. +....++++.+||+++-|-- .+.+.+.+.+
T Consensus 101 l~-~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 101 LD-EIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp HH-HHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred HH-HHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 42 34456889999999976532 3345555543
No 110
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.40 E-value=9.4e-07 Score=98.36 Aligned_cols=128 Identities=23% Similarity=0.225 Sum_probs=84.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-----------cCC-------------ee-cCHHHHhc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-----------VGV-------------EL-VSFDQALA 282 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-----------~g~-------------~~-~~l~ell~ 282 (656)
-++|||||+|.||..+|..+...|++|++||++.. .+.+.+ .|. .. .+++ .++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 83 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALA 83 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hhc
Confidence 35899999999999999999999999999998752 222221 221 22 2554 689
Q ss_pred cCCEEEEccCCCccccccccHHHHhcCCCCcEE-EEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCC
Q 006212 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRI-VNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHE 361 (656)
Q Consensus 283 ~aDvV~l~~Plt~~T~~li~~~~l~~mK~gail-INvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~ 361 (656)
+||+|+.|+|...+.+.-+-.+....++++++| +|++.-.+ ..+.+.+... -...+++.|..-|. . +
T Consensus 84 ~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i---~~ia~~~~~p-~~~ig~hf~~Pa~v---~-----~ 151 (483)
T 3mog_A 84 AADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISI---TAIAAEIKNP-ERVAGLHFFNPAPV---M-----K 151 (483)
T ss_dssp GCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH---HHHTTTSSSG-GGEEEEEECSSTTT---C-----C
T ss_pred CCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH---HHHHHHccCc-cceEEeeecChhhh---C-----C
Confidence 999999999966554433334555668999999 57765443 4555555432 22356676654432 2 3
Q ss_pred cEEEcCCC
Q 006212 362 NVTVTPHL 369 (656)
Q Consensus 362 nvilTPH~ 369 (656)
-+.+.|+-
T Consensus 152 Lvevv~g~ 159 (483)
T 3mog_A 152 LVEVVSGL 159 (483)
T ss_dssp EEEEEECS
T ss_pred eEEEecCC
Confidence 45566654
No 111
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.38 E-value=6.2e-07 Score=90.82 Aligned_cols=99 Identities=13% Similarity=0.223 Sum_probs=73.8
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHH-HHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKA-RAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a-~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
++|||||+|.||+.+|+.+...|.+|.+||++.. .+.. ...|+... +++++++++|+|++|+| .... .+.+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~-----~~v~ 77 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLF-----ETVL 77 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGH-----HHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhH-----HHHH
Confidence 4899999999999999999988999999998752 2222 23477654 79999999999999999 4332 3445
Q ss_pred hcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 307 AKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 307 ~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
..++++.+++++..|-- .+.+.+.+..+
T Consensus 78 ~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 78 KPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp TTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred HHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 55778999999976543 34455555544
No 112
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.35 E-value=1.3e-06 Score=96.30 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=75.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHH-------------------cC-Cee-cCHHHHhccCCEE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-------------------VG-VEL-VSFDQALATADFI 287 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aDvV 287 (656)
-+++|||+|.+|..+|..|...|++|++||++... +...+ .| +.. .++.+.+++||+|
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvv 88 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAV 88 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEE
Confidence 47999999999999999999999999999987632 22211 11 233 3788999999999
Q ss_pred EEccCCCcc----------ccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 288 SLHMPLNPT----------TSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 288 ~l~~Plt~~----------T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
++|+|...+ .+..+ +.....|++|.++|+++.-.+-..+.+.+.+.+
T Consensus 89 ii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 89 FIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp EECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 999983321 12222 345567999999999986554445555555544
No 113
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.33 E-value=1.4e-06 Score=91.53 Aligned_cols=90 Identities=22% Similarity=0.189 Sum_probs=69.5
Q ss_pred CCCEEEEEecChhHHHHHHHHhc-CCC-EEEEECCCCC-hh-HHHHcC--Cee-cCHHHHhccCCEEEEccCCCcccccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKG-LGM-NVIAHDPYAP-AD-KARAVG--VEL-VSFDQALATADFISLHMPLNPTTSKI 300 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~-~G~-~Vi~~d~~~~-~~-~a~~~g--~~~-~~l~ell~~aDvV~l~~Plt~~T~~l 300 (656)
.+++|||||+|.||+.+++.+.. +|+ +|.+||++.. .+ .+...+ +.. .++++++++||+|++|+|. +..+
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~---~~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLA---TEPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCC---SSCC
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCC---CCcc
Confidence 56799999999999999999875 487 9999998752 22 233345 554 3799999999999999994 3455
Q ss_pred ccHHHHhcCCCCcEEEEcCCCch
Q 006212 301 FNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg~i 323 (656)
+.. ..+++|.+|++++....
T Consensus 211 ~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 211 LFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp BCG---GGSCTTCEEEECCCCST
T ss_pred cCH---HHcCCCcEEEeCCCCCC
Confidence 654 46899999999976544
No 114
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.32 E-value=4e-07 Score=92.25 Aligned_cols=98 Identities=18% Similarity=0.254 Sum_probs=70.9
Q ss_pred CEEEEEecChhHHHHHHHHhcCC-CEEEEECCCCC-hhHHHH-cCCeec-CHHHHhccCCEEEEccCCCccccccccHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYAP-ADKARA-VGVELV-SFDQALATADFISLHMPLNPTTSKIFNDET 305 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G-~~Vi~~d~~~~-~~~a~~-~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 305 (656)
++|||||+|.||+.+|+.|...| .+|.+||++.. .+...+ .|+... ++++++ ++|+|++|+| ......++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---- 74 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---- 74 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH----
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH----
Confidence 37999999999999999999889 99999998752 233333 477654 677888 9999999999 44443333
Q ss_pred HhcCC-CCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 306 FAKMK-KGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 306 l~~mK-~gailINvaRg~ivde~aL~~aL~~g 336 (656)
..++ ++++|++++.|-- .+.+.+.+..+
T Consensus 75 -~~l~~~~~ivv~~~~g~~--~~~l~~~~~~~ 103 (263)
T 1yqg_A 75 -KNIRTNGALVLSVAAGLS--VGTLSRYLGGT 103 (263)
T ss_dssp -TTCCCTTCEEEECCTTCC--HHHHHHHTTSC
T ss_pred -HHhccCCCEEEEecCCCC--HHHHHHHcCCC
Confidence 3333 2899999965533 25666666654
No 115
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.31 E-value=1.3e-06 Score=96.48 Aligned_cols=105 Identities=22% Similarity=0.221 Sum_probs=74.4
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHH-------------------cC-Cee-cCHHHHhccCCEE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-------------------VG-VEL-VSFDQALATADFI 287 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~-------------------~g-~~~-~~l~ell~~aDvV 287 (656)
++|+|||+|.||..+|..|...|++|++||++... +...+ .+ +.. .++++++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 58999999999999999999999999999987522 22221 11 233 3788999999999
Q ss_pred EEccCCCc---------cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 288 SLHMPLNP---------TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 288 ~l~~Plt~---------~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
++|+|... ..+..+ +.....++++.++|+++.-.+-..+.+.+.+.+
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999442 122222 344556899999999996444344555554443
No 116
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.31 E-value=3.5e-06 Score=93.26 Aligned_cols=113 Identities=19% Similarity=0.254 Sum_probs=74.9
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-----------cC-----------Cee-cCHHHHhccC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-----------VG-----------VEL-VSFDQALATA 284 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-----------~g-----------~~~-~~l~ell~~a 284 (656)
=++|+|||.|.||..+|..+...|++|++||++.. .+.+.+ .| ... .++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 36899999999999999999999999999998752 222211 11 112 256 568899
Q ss_pred CEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeecc
Q 006212 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVF 346 (656)
Q Consensus 285 DvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~ 346 (656)
|+|+.|+|...+.+.-+-.+....++++++|+....+- ....+.+.+.. .++ .+.+.|
T Consensus 116 DlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~~~~~--ig~hf~ 174 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDRPQLV--IGTHFF 174 (463)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEEEC
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcCCcce--EEeecC
Confidence 99999999543333322234445689999998744332 33466665543 344 455666
No 117
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.27 E-value=1.2e-06 Score=96.25 Aligned_cols=105 Identities=15% Similarity=0.189 Sum_probs=74.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-------------------cC-Cee-cCHHHHhccCCEE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-------------------VG-VEL-VSFDQALATADFI 287 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-------------------~g-~~~-~~l~ell~~aDvV 287 (656)
++|+|||+|.||..+|..|...|++|++||++.. .+...+ .| +.. .++++.+++||+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 3799999999999999999999999999998742 222222 22 333 3788889999999
Q ss_pred EEccCCCcc---------ccccccHHHHhcCCC---CcEEEEcCCCchhc-HHHHHHhHhc
Q 006212 288 SLHMPLNPT---------TSKIFNDETFAKMKK---GVRIVNVARGGVID-EEALVRALDS 335 (656)
Q Consensus 288 ~l~~Plt~~---------T~~li~~~~l~~mK~---gailINvaRg~ivd-e~aL~~aL~~ 335 (656)
++|+|.... ....+ +.....|++ +++||+++...+-. .+.+.+.+++
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred EEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999995443 22222 233445788 99999998766544 5556665654
No 118
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=98.27 E-value=3.1e-06 Score=85.36 Aligned_cols=70 Identities=9% Similarity=0.145 Sum_probs=56.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~ 308 (656)
-.+|||||+|+||.++|+.|+..|++|.+||+. ++ +++|| ++|+|.. .+..++ .+....
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~----------------~~-~~~aD--ilavP~~-ai~~vl-~~l~~~ 64 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP----------------ED-IRDFE--LVVIDAH-GVEGYV-EKLSAF 64 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG----------------GG-GGGCS--EEEECSS-CHHHHH-HHHHTT
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH----------------HH-hccCC--EEEEcHH-HHHHHH-HHHHHh
Confidence 368999999999999999999999999999972 12 57899 8999954 455555 344556
Q ss_pred CCCCcEEEEcC
Q 006212 309 MKKGVRIVNVA 319 (656)
Q Consensus 309 mK~gailINva 319 (656)
+++|++++|++
T Consensus 65 l~~g~ivvd~s 75 (232)
T 3dfu_A 65 ARRGQMFLHTS 75 (232)
T ss_dssp CCTTCEEEECC
T ss_pred cCCCCEEEEEC
Confidence 89999999984
No 119
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.26 E-value=9.6e-06 Score=83.90 Aligned_cols=81 Identities=21% Similarity=0.285 Sum_probs=68.0
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+.++.||++.|||.|. +|+.+|..|...|++|..++++. .++++.+++||+|+.++|. .+++
T Consensus 154 ~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------~~L~~~~~~ADIVI~Avg~----p~~I 217 (285)
T 3p2o_A 154 YEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------KDLSLYTRQADLIIVAAGC----VNLL 217 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHTTCSEEEECSSC----TTCB
T ss_pred hCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhhcCCEEEECCCC----CCcC
Confidence 46789999999999998 69999999999999999998642 2588999999999999983 3456
Q ss_pred cHHHHhcCCCCcEEEEcCCCc
Q 006212 302 NDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~ 322 (656)
..+. +|+|+++||++.-.
T Consensus 218 ~~~~---vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 218 RSDM---VKEGVIVVDVGINR 235 (285)
T ss_dssp CGGG---SCTTEEEEECCCEE
T ss_pred CHHH---cCCCeEEEEeccCc
Confidence 6644 59999999999654
No 120
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=98.22 E-value=1.7e-06 Score=85.58 Aligned_cols=73 Identities=11% Similarity=0.110 Sum_probs=60.8
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccC---ccEEEEEEeCCCCCHHHHHHHhcCCCccEEEEEe
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRR---NHGIMAIGVDEEPNQDSLKEIGKVPAIEEYTLLH 631 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~g---g~al~~i~~D~~~~~e~l~~L~~~~~V~~v~~v~ 631 (656)
-+|.+.+.|+||+++.|+++|+++++||.+|+..+..+| +.|.+.+++++...++++++|+++|+|.+++.+.
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~~Le~LL~kLrkI~gV~~V~Rv~ 80 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKTFDYIIEIEEEE 80 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHTCTTEEEEEEEC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCCCHHHHHHHHhCCCCeeEEEEEc
Confidence 367788999999999999999999999999999886643 4689999999995559999999999999999883
No 121
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.21 E-value=3e-06 Score=89.47 Aligned_cols=87 Identities=24% Similarity=0.247 Sum_probs=66.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHc-CC--------------e-ecCHHHHhccCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAV-GV--------------E-LVSFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~-g~--------------~-~~~l~ell~~aDvV~l~~P 292 (656)
++|+|||+|.||..+|..|...|++|.+||++. ..+...+. +. . ..+++++++++|+|++|+|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 589999999999999999999999999999875 22333333 21 1 2378888999999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEc
Q 006212 293 LNPTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~gailINv 318 (656)
... +..++ +.....++++++++++
T Consensus 85 ~~~-~~~~~-~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIH-HASIA-ANIASYISEGQLIILN 108 (359)
T ss_dssp GGG-HHHHH-HHHGGGCCTTCEEEES
T ss_pred chH-HHHHH-HHHHHhCCCCCEEEEc
Confidence 543 44444 3445568999999999
No 122
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.19 E-value=1.4e-06 Score=88.27 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=69.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCC----CEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccH
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLG----MNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G----~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
.++|||||+|.||+.+|+.|...| .+|.+||++... .|+... ++++++++||+|++|+| ......++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----~g~~~~~~~~~~~~~~D~vi~~v~-~~~~~~v~~- 76 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----TTLNYMSSNEELARHCDIIVCAVK-PDIAGSVLN- 76 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----SSSEECSCHHHHHHHCSEEEECSC-TTTHHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----CceEEeCCHHHHHhcCCEEEEEeC-HHHHHHHHH-
Confidence 358999999999999999998778 689999987533 577654 78899999999999999 444444442
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
+....++++.++++++.-+ .+.+.+.+..+
T Consensus 77 ~l~~~l~~~~vv~~~~gi~---~~~l~~~~~~~ 106 (262)
T 2rcy_A 77 NIKPYLSSKLLISICGGLN---IGKLEEMVGSE 106 (262)
T ss_dssp HSGGGCTTCEEEECCSSCC---HHHHHHHHCTT
T ss_pred HHHHhcCCCEEEEECCCCC---HHHHHHHhCCC
Confidence 2334455555555554332 34555555554
No 123
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.19 E-value=1.8e-06 Score=89.20 Aligned_cols=107 Identities=16% Similarity=0.202 Sum_probs=74.5
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee-------------cCHHHHhc---cCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-------------VSFDQALA---TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~-------------~~l~ell~---~aDvV~l~~P 292 (656)
++|+|||+|.||..+|..|...|.+|.+||++. ..+...+.|+.. .+.+++.+ ++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 489999999999999999999999999999875 233334445322 23445544 8999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeE
Q 006212 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~ 339 (656)
. ..+..++ +.....++++++||++..| +-..+.+.+.+...++.
T Consensus 84 ~-~~~~~v~-~~l~~~l~~~~~iv~~~~g-~~~~~~l~~~~~~~~vi 127 (316)
T 2ew2_A 84 A-QQLDAMF-KAIQPMITEKTYVLCLLNG-LGHEDVLEKYVPKENIL 127 (316)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCSS-SCTHHHHTTTSCGGGEE
T ss_pred c-ccHHHHH-HHHHHhcCCCCEEEEecCC-CCcHHHHHHHcCCccEE
Confidence 3 3444444 3344568899999999764 32345666666554443
No 124
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.17 E-value=2.3e-06 Score=89.56 Aligned_cols=90 Identities=17% Similarity=0.227 Sum_probs=67.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECC--CC-ChhHHHHcCC-----------eec---CHHHHhccCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDP--YA-PADKARAVGV-----------ELV---SFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~--~~-~~~~a~~~g~-----------~~~---~l~ell~~aDvV~l~~P 292 (656)
++|+|||+|.||..+|..|...|.+|.+||+ +. ..+...+.|. ... ++.+.++++|+|++|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 3799999999999999999988999999998 54 2233333332 222 57788899999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
.. .+..++ ..... +++++++|++..|-
T Consensus 81 ~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~ 107 (335)
T 1txg_A 81 TD-GVLPVM-SRILP-YLKDQYIVLISKGL 107 (335)
T ss_dssp GG-GHHHHH-HHHTT-TCCSCEEEECCCSE
T ss_pred hH-HHHHHH-HHHhc-CCCCCEEEEEcCcC
Confidence 44 444444 23345 78899999998764
No 125
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.16 E-value=3.3e-06 Score=91.63 Aligned_cols=93 Identities=20% Similarity=0.308 Sum_probs=76.9
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECC-------CCChhHHHHcCCeecCHHHHhccCCEEEEccCCCcccc
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDP-------YAPADKARAVGVELVSFDQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~-------~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~ 298 (656)
-|+||||+|||||.-|.+-|..||..|.+|++--+ ..+...|.+.|..+.+..|+++.||+|.+.+|... ..
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~-q~ 112 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQ-HS 112 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGG-HH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhh-HH
Confidence 48999999999999999999999999999987532 23456788999999999999999999999999443 33
Q ss_pred ccccHHHHhcCCCCcEEEEcCCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg 321 (656)
.++ +.....||+|+.|. .+.|
T Consensus 113 ~vy-~~I~p~lk~G~~L~-faHG 133 (491)
T 3ulk_A 113 DVV-RTVQPLMKDGAALG-YSHG 133 (491)
T ss_dssp HHH-HHHGGGSCTTCEEE-ESSC
T ss_pred HHH-HHHHhhCCCCCEEE-ecCc
Confidence 444 45888899999876 5665
No 126
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.16 E-value=1.7e-06 Score=84.79 Aligned_cols=114 Identities=17% Similarity=0.213 Sum_probs=77.5
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCC-hhHHH-HcC-------CeecCHHHHhccCCEEEEccCCCccccc
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-AVG-------VELVSFDQALATADFISLHMPLNPTTSK 299 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~-~~g-------~~~~~l~ell~~aDvV~l~~Plt~~T~~ 299 (656)
++|+|+| .|.||+.+|+.|...|++|.++|++.. .+... ..+ +...+++++++++|+|++++| ...+..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~-~~~~~~ 79 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIP-WEHAID 79 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSC-HHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCC-hhhHHH
Confidence 3799999 999999999999999999999998742 22221 122 334478889999999999999 333444
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhc------------HHHHHHhHhcCCeEEEEeeccCCCC
Q 006212 300 IFNDETFAKMKKGVRIVNVARGGVID------------EEALVRALDSGVVAQAALDVFTEEP 350 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaRg~ivd------------e~aL~~aL~~g~i~gA~lDV~~~EP 350 (656)
++. +....++ +.++++++.|--.+ .+.+.+.+...++ ++.+.+.|
T Consensus 80 ~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~~~~----v~~~~~~~ 136 (212)
T 1jay_A 80 TAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKV----VSALHTIP 136 (212)
T ss_dssp HHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSCE----EECCTTCC
T ss_pred HHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCCCeE----EEEccchH
Confidence 432 2223354 89999999764321 4666666654333 45555554
No 127
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.13 E-value=4.2e-06 Score=93.07 Aligned_cols=104 Identities=19% Similarity=0.164 Sum_probs=70.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHc-------C-------------Cee-cCHHHHhccCCE
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV-------G-------------VEL-VSFDQALATADF 286 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~-------g-------------~~~-~~l~ell~~aDv 286 (656)
..+|+|||+|.||..+|..|...|++|++||++.. .+...+. | +.. .++++.+++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 36899999999999999999999999999998642 2222211 1 222 267788999999
Q ss_pred EEEccCCCc---------cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhH
Q 006212 287 ISLHMPLNP---------TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRAL 333 (656)
Q Consensus 287 V~l~~Plt~---------~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL 333 (656)
|++|+|... ..+..+ +.....+++++++|+.+.-.+=..+.+.+.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l 142 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAV 142 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHH
T ss_pred EEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHH
Confidence 999999421 122222 2344568999999999843232334444433
No 128
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.13 E-value=5.5e-06 Score=90.02 Aligned_cols=106 Identities=14% Similarity=0.129 Sum_probs=75.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCC------------------ee-cCHHHHhccCCEEEE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGV------------------EL-VSFDQALATADFISL 289 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~------------------~~-~~l~ell~~aDvV~l 289 (656)
++|+|||+|.||..+|..|.. |++|++||++.. .+...+.+. .. .++.+.+++||+|++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 379999999999999999998 999999998752 222222232 22 257788899999999
Q ss_pred ccCCCc----------cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 290 HMPLNP----------TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 290 ~~Plt~----------~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
|+|... .+...+ +.... ++++.+||+.+.-++-..+.+.+.+....+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~~v 136 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTDRI 136 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCSCE
T ss_pred ecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCCeE
Confidence 999542 122222 23444 889999999877666556777766655444
No 129
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.13 E-value=2.6e-06 Score=91.27 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=70.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcC--------------Cee-cCHHHHhccCCEEEEccC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVG--------------VEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g--------------~~~-~~l~ell~~aDvV~l~~P 292 (656)
.++|+|||.|.+|..+|..|...|.+|.+||+... .+...+.+ +.. .++++.+++||+|++++|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp 108 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVP 108 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCC
Confidence 46899999999999999999999999999998742 23333322 122 378899999999999999
Q ss_pred CCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 293 LNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
. ...+.++ ++....+++++++|++..|-..
T Consensus 109 ~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~ 138 (356)
T 3k96_A 109 S-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAK 138 (356)
T ss_dssp H-HHHHHHH-HHHGGGCCTTCEEEECCCSCBT
T ss_pred H-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCc
Confidence 3 3444444 3344568899999999876543
No 130
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.10 E-value=2.4e-06 Score=84.94 Aligned_cols=89 Identities=19% Similarity=0.271 Sum_probs=63.5
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEE-ECCCCC-hh-HHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccHH
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYAP-AD-KARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDE 304 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~-~d~~~~-~~-~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~ 304 (656)
-++|+|||+|.||..+|+.|...|++|.+ +|++.. .+ .+.+.|+.. .+..+.++++|+|++++|. .....++..
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~~~- 100 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIVTQ- 100 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHHTT-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHHHH-
Confidence 36899999999999999999999999999 998753 22 234456543 3555668999999999993 222222211
Q ss_pred HHhcCCCCcEEEEcCCC
Q 006212 305 TFAKMKKGVRIVNVARG 321 (656)
Q Consensus 305 ~l~~mK~gailINvaRg 321 (656)
+.. .++.++|+++-|
T Consensus 101 -l~~-~~~~ivi~~~~g 115 (220)
T 4huj_A 101 -VSD-WGGQIVVDASNA 115 (220)
T ss_dssp -CSC-CTTCEEEECCCC
T ss_pred -hhc-cCCCEEEEcCCC
Confidence 112 357899999854
No 131
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.10 E-value=7.1e-06 Score=89.98 Aligned_cols=105 Identities=18% Similarity=0.268 Sum_probs=71.4
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee---cCHHHH---------------hccCCEEE
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL---VSFDQA---------------LATADFIS 288 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~---~~l~el---------------l~~aDvV~ 288 (656)
-+|.++.|||+|.+|..+|..|...|++|++||++...-.....|... ..++++ +++||+|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred ccCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 468899999999999999999999999999999875322222223211 133333 45799999
Q ss_pred EccCCCcccc---------cccc--HHHHhcCCCCcEEEEcCCCchhcHHHHHHh
Q 006212 289 LHMPLNPTTS---------KIFN--DETFAKMKKGVRIVNVARGGVIDEEALVRA 332 (656)
Q Consensus 289 l~~Plt~~T~---------~li~--~~~l~~mK~gailINvaRg~ivde~aL~~a 332 (656)
+|+| ||... .+.. +...+.|++|.++|+.+.-.+-..+.+.+.
T Consensus 89 i~Vp-Tp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~ 142 (431)
T 3ojo_A 89 IAVP-TPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKP 142 (431)
T ss_dssp ECCC-CCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHH
T ss_pred EEeC-CCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHH
Confidence 9999 44321 1222 345567999999999997666555665543
No 132
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.09 E-value=3.9e-06 Score=88.75 Aligned_cols=92 Identities=21% Similarity=0.208 Sum_probs=67.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCC-------CEEEEECCCCC-----h-hHHHHc--------------CCee-cCHHHHh
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG-------MNVIAHDPYAP-----A-DKARAV--------------GVEL-VSFDQAL 281 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G-------~~Vi~~d~~~~-----~-~~a~~~--------------g~~~-~~l~ell 281 (656)
++|+|||+|.||..+|..|...| .+|.+||+... . +...+. ++.. .++++.+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA 88 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHH
Confidence 58999999999999999998777 89999998754 2 222211 1222 3688889
Q ss_pred ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCch
Q 006212 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~i 323 (656)
++||+|++|+|. ..+..++ ++....+++++++|++..|-.
T Consensus 89 ~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 89 EDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp TTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred cCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 999999999994 3444444 233445788999999987643
No 133
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.04 E-value=1.2e-05 Score=93.65 Aligned_cols=113 Identities=17% Similarity=0.268 Sum_probs=76.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHH-----------HHcC-------------Cee-cCHHHHhcc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKA-----------RAVG-------------VEL-VSFDQALAT 283 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a-----------~~~g-------------~~~-~~l~ell~~ 283 (656)
++|||||+|.||..+|..+...|++|++||++.. .+.+ .+.| +.. .++ +.+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 393 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGN 393 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGG
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCC
Confidence 5799999999999999999999999999998752 2221 1123 122 245 67899
Q ss_pred CCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeeccC
Q 006212 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFT 347 (656)
Q Consensus 284 aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~~ 347 (656)
||+|+.++|...+.+..+-.+....++++++|+..+++- ....+.+.+.. .++ .+.+.|.
T Consensus 394 aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl--~i~~la~~~~~~~~~--ig~hf~~ 454 (715)
T 1wdk_A 394 VDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTI--SISLLAKALKRPENF--VGMHFFN 454 (715)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSS--CHHHHGGGCSCGGGE--EEEECCS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCC--CHHHHHHHhcCccce--EEEEccC
Confidence 999999999766544433344556689999997554443 23455555543 234 5566655
No 134
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.04 E-value=6.9e-06 Score=91.32 Aligned_cols=106 Identities=14% Similarity=0.091 Sum_probs=72.4
Q ss_pred CEEEEEecChhHHHHHHHHhcC--CCEEEEECCCCCh-hHHHH-------------------cCCee-cCHHHHhccCCE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYAPA-DKARA-------------------VGVEL-VSFDQALATADF 286 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~--G~~Vi~~d~~~~~-~~a~~-------------------~g~~~-~~l~ell~~aDv 286 (656)
++|+|||+|.||..+|..|... |++|++||++... +...+ .++.. .++.+.+++||+
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDv 89 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADL 89 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCE
Confidence 5899999999999999999865 7999999986421 11111 01222 267788899999
Q ss_pred EEEccCCCccc-----------cccc--cHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 287 ISLHMPLNPTT-----------SKIF--NDETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 287 V~l~~Plt~~T-----------~~li--~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
|++|+|..... ..+. -+.....++++.+||+++.-.+-..+.+.+.+++
T Consensus 90 vii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 90 IFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp EEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 99999843211 0111 1334556899999999886555445566666665
No 135
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.03 E-value=1.6e-06 Score=92.36 Aligned_cols=91 Identities=16% Similarity=0.197 Sum_probs=67.4
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcC--------------Cee-cCHHHHhccCCEEEEccCCC
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVG--------------VEL-VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g--------------~~~-~~l~ell~~aDvV~l~~Plt 294 (656)
+|+|||+|.||..+|.+|...|++|.+||+.. ..+...+.+ +.. .+++++++++|+|++|+|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~- 95 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT- 95 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-
Confidence 89999999999999999998899999999874 223333322 232 3688889999999999993
Q ss_pred ccccccccHH---HHhcCCC-CcEEEEcCCCc
Q 006212 295 PTTSKIFNDE---TFAKMKK-GVRIVNVARGG 322 (656)
Q Consensus 295 ~~T~~li~~~---~l~~mK~-gailINvaRg~ 322 (656)
..+..++... ....+++ ++++|++..|-
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi 127 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGI 127 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSC
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcC
Confidence 4444444320 3344677 89999998663
No 136
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.01 E-value=4.5e-05 Score=80.44 Aligned_cols=131 Identities=15% Similarity=0.090 Sum_probs=88.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHH-----------HHcC--------------Ce-ecCHHHHh
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKA-----------RAVG--------------VE-LVSFDQAL 281 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a-----------~~~g--------------~~-~~~l~ell 281 (656)
-++|+|||.|.||+.+|..+...|++|+.||+... .+.+ .+.| +. ..++++.+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~ 85 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAV 85 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHT
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHh
Confidence 46899999999999999999999999999998742 1111 1111 11 23788999
Q ss_pred ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeeccCCCCCCCCCccccC
Q 006212 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFTEEPPAKDSKLVQH 360 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~~~EP~~~~~~L~~~ 360 (656)
++||+|+=++|-..+.+.-+-++.=+.++++++|-.-.++= ....+.+.++. .++ .+++.|.+-| --||.+
T Consensus 86 ~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl--~is~ia~~~~~p~r~--ig~HffNP~~---~m~LVE- 157 (319)
T 3ado_A 86 EGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL--LPSKLFTGLAHVKQC--IVAHPVNPPY---YIPLVE- 157 (319)
T ss_dssp TTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC--CHHHHHTTCTTGGGE--EEEEECSSTT---TCCEEE-
T ss_pred ccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhc--cchhhhhhccCCCcE--EEecCCCCcc---ccchHH-
Confidence 99999999999777666544455555589999986554443 34556555554 355 4556554333 246765
Q ss_pred CcEEEcCCC
Q 006212 361 ENVTVTPHL 369 (656)
Q Consensus 361 ~nvilTPH~ 369 (656)
+|-+|+.
T Consensus 158 --iv~g~~T 164 (319)
T 3ado_A 158 --LVPHPET 164 (319)
T ss_dssp --EEECTTC
T ss_pred --hcCCCCC
Confidence 6666664
No 137
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.99 E-value=1.1e-05 Score=89.50 Aligned_cols=101 Identities=17% Similarity=0.147 Sum_probs=70.8
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CC-EEEEECCCCC----hhHHHH----------------------cC-CeecCHHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GM-NVIAHDPYAP----ADKARA----------------------VG-VELVSFDQA 280 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~-~Vi~~d~~~~----~~~a~~----------------------~g-~~~~~l~el 280 (656)
++|+|||+|.+|..+|..+... |+ +|++||+... .-.... .| +...+-.+.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd~ea 98 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPDFSR 98 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCcHHH
Confidence 5899999999999999999998 99 9999998765 221111 12 222222678
Q ss_pred hccCCEEEEccCCCc--------ccccccc--HHHHhcCCCCcEEEEcCCCchhcHHHHH
Q 006212 281 LATADFISLHMPLNP--------TTSKIFN--DETFAKMKKGVRIVNVARGGVIDEEALV 330 (656)
Q Consensus 281 l~~aDvV~l~~Plt~--------~T~~li~--~~~l~~mK~gailINvaRg~ivde~aL~ 330 (656)
+++||+|++|+|... +...+.. +.....|++|.++|+.+.-.+-..+.+.
T Consensus 99 ~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~ 158 (478)
T 3g79_A 99 ISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMA 158 (478)
T ss_dssp GGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHH
T ss_pred HhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHH
Confidence 899999999999542 2222222 3455679999999999865554444443
No 138
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=97.98 E-value=2.5e-05 Score=91.10 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=74.9
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH-----------cC-------------Cee-cCHHHHhcc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA-----------VG-------------VEL-VSFDQALAT 283 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~-----------~g-------------~~~-~~l~ell~~ 283 (656)
++|||||.|.||..+|..+...|++|++||++.. .+.+.+ .| +.. .++ +.+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~ 391 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRD 391 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTT
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCC
Confidence 5799999999999999999999999999998752 222111 12 112 255 56899
Q ss_pred CCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeeccC
Q 006212 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFT 347 (656)
Q Consensus 284 aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~~ 347 (656)
||+|+.++|...+.+..+-.+....++++++|+...++-. ...+.+.++. .++ .+.+.|.
T Consensus 392 aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~--i~~la~~~~~p~~~--iG~hf~~ 452 (725)
T 2wtb_A 392 VDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTID--LNKIGERTKSQDRI--VGAHFFS 452 (725)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSC--HHHHTTTCSCTTTE--EEEEECS
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCC--HHHHHHHhcCCCCE--EEecCCC
Confidence 9999999996654444333445566899999965444332 2345554533 244 5556665
No 139
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=97.98 E-value=4.9e-06 Score=89.20 Aligned_cols=90 Identities=11% Similarity=0.176 Sum_probs=66.0
Q ss_pred CEEEEEecChhHHHHHHHHhcCC-------CEEEEECCCCC-----h-hHHHHc--------------CCee-cCHHHHh
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG-------MNVIAHDPYAP-----A-DKARAV--------------GVEL-VSFDQAL 281 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G-------~~Vi~~d~~~~-----~-~~a~~~--------------g~~~-~~l~ell 281 (656)
++|+|||.|.||..+|..|...| .+|.+||+... . +...+. ++.. .++++.+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 47999999999999999998777 89999998754 2 222221 2233 3678889
Q ss_pred ccCCEEEEccCCCccccccccHHHHh----cCCCCcEEEEcCCC
Q 006212 282 ATADFISLHMPLNPTTSKIFNDETFA----KMKKGVRIVNVARG 321 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T~~li~~~~l~----~mK~gailINvaRg 321 (656)
++||+|++++| ......++. +... .+++++++|++..|
T Consensus 102 ~~aDvVilav~-~~~~~~vl~-~i~~~~~~~l~~~~ivvs~~~G 143 (375)
T 1yj8_A 102 NDADLLIFIVP-CQYLESVLA-SIKESESIKIASHAKAISLTKG 143 (375)
T ss_dssp TTCSEEEECCC-HHHHHHHHH-HHTC---CCCCTTCEEEECCCS
T ss_pred cCCCEEEEcCC-HHHHHHHHH-HHhhhhhccCCCCCEEEEeCCc
Confidence 99999999999 344444442 2333 57889999999876
No 140
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.97 E-value=1.4e-05 Score=82.64 Aligned_cols=82 Identities=13% Similarity=0.257 Sum_probs=68.4
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+.++.||++.|||.|. +|+.+|+.|...|.+|..++.+. .++.+.+++||+|+.+++.. +++
T Consensus 153 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~p----~lI 216 (288)
T 1b0a_A 153 YNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT------------KNLRHHVENADLLIVAVGKP----GFI 216 (288)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC------------SCHHHHHHHCSEEEECSCCT----TCB
T ss_pred cCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc------------hhHHHHhccCCEEEECCCCc----CcC
Confidence 46789999999999997 59999999999999999997543 35889999999999999822 356
Q ss_pred cHHHHhcCCCCcEEEEcCCCch
Q 006212 302 NDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~i 323 (656)
..+. +|+|+++||+|.-.+
T Consensus 217 ~~~~---vk~GavVIDVgi~r~ 235 (288)
T 1b0a_A 217 PGDW---IKEGAIVIDVGINRL 235 (288)
T ss_dssp CTTT---SCTTCEEEECCCEEC
T ss_pred CHHH---cCCCcEEEEccCCcc
Confidence 6655 499999999996543
No 141
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=97.96 E-value=6.1e-06 Score=84.19 Aligned_cols=90 Identities=17% Similarity=0.149 Sum_probs=64.3
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHc---CC----e-ecCHHHHhccCCEEEEccCCCcccccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAV---GV----E-LVSFDQALATADFISLHMPLNPTTSKI 300 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~---g~----~-~~~l~ell~~aDvV~l~~Plt~~T~~l 300 (656)
++|+|||+|.||..+|..|...|.+|.+||+... .+..... |. . ..+..+.++++|+|++|+|.. .+..+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~-~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW-QVSDA 79 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG-GHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH-hHHHH
Confidence 3799999999999999999999999999998753 2211111 21 0 123346778999999999954 34444
Q ss_pred ccHHHHhcCCCCcEEEEcCCC
Q 006212 301 FNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg 321 (656)
+ +.....+++++++|++..|
T Consensus 80 ~-~~l~~~l~~~~~vv~~~~g 99 (291)
T 1ks9_A 80 V-KSLASTLPVTTPILLIHNG 99 (291)
T ss_dssp H-HHHHTTSCTTSCEEEECSS
T ss_pred H-HHHHhhCCCCCEEEEecCC
Confidence 4 3344567889999998654
No 142
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.95 E-value=1.9e-05 Score=81.72 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=67.8
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+.++.||++.|||.|. +|+.+|..|...|++|..++.+. .++++.+++||+|+.++|. .+++
T Consensus 155 ~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------~~L~~~~~~ADIVI~Avg~----p~~I 218 (286)
T 4a5o_A 155 TGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------RDLADHVSRADLVVVAAGK----PGLV 218 (286)
T ss_dssp TTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHTCSEEEECCCC----TTCB
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------cCHHHHhccCCEEEECCCC----CCCC
Confidence 46789999999999987 79999999999999999987542 2588899999999999983 3456
Q ss_pred cHHHHhcCCCCcEEEEcCCCc
Q 006212 302 NDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~ 322 (656)
..+. +|||+++||++.-.
T Consensus 219 ~~~~---vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 219 KGEW---IKEGAIVIDVGINR 236 (286)
T ss_dssp CGGG---SCTTCEEEECCSCS
T ss_pred CHHH---cCCCeEEEEecccc
Confidence 6654 59999999999544
No 143
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.95 E-value=1.7e-05 Score=82.54 Aligned_cols=81 Identities=26% Similarity=0.310 Sum_probs=67.2
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHH--HHhccCCEEEEccCCCccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFD--QALATADFISLHMPLNPTTSK 299 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~--ell~~aDvV~l~~Plt~~T~~ 299 (656)
.+.++.||++.|||.|. +|+.+|..|...|++|..++++.. +++ +.+++||+|+.++|. .+
T Consensus 159 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------~l~l~~~~~~ADIVI~Avg~----p~ 222 (300)
T 4a26_A 159 CGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------TEDMIDYLRTADIVIAAMGQ----PG 222 (300)
T ss_dssp HTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------HHHHHHHHHTCSEEEECSCC----TT
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------CchhhhhhccCCEEEECCCC----CC
Confidence 36789999999999988 699999999999999999987432 345 889999999999994 33
Q ss_pred cccHHHHhcCCCCcEEEEcCCCc
Q 006212 300 IFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaRg~ 322 (656)
++..+. +|+|+++||++.-.
T Consensus 223 ~I~~~~---vk~GavVIDvgi~~ 242 (300)
T 4a26_A 223 YVKGEW---IKEGAAVVDVGTTP 242 (300)
T ss_dssp CBCGGG---SCTTCEEEECCCEE
T ss_pred CCcHHh---cCCCcEEEEEeccC
Confidence 566544 59999999998544
No 144
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.94 E-value=2.2e-05 Score=81.22 Aligned_cols=81 Identities=16% Similarity=0.287 Sum_probs=67.6
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+.++.||++.|||.|. +|+.+|+.|.+.|++|..++++. .++++.+++||+|+.++|. .+++
T Consensus 155 ~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 218 (285)
T 3l07_A 155 YGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------TDLKSHTTKADILIVAVGK----PNFI 218 (285)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred hCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------hhHHHhcccCCEEEECCCC----CCCC
Confidence 46789999999999998 69999999999999999987542 2588999999999999983 3456
Q ss_pred cHHHHhcCCCCcEEEEcCCCc
Q 006212 302 NDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~ 322 (656)
..+. +|+|+++||++.-.
T Consensus 219 ~~~~---vk~GavVIDvgi~~ 236 (285)
T 3l07_A 219 TADM---VKEGAVVIDVGINH 236 (285)
T ss_dssp CGGG---SCTTCEEEECCCEE
T ss_pred CHHH---cCCCcEEEEecccC
Confidence 6644 59999999998544
No 145
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=97.94 E-value=1.4e-05 Score=84.21 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=64.9
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcC-----------Cee-cCHHHHhccCCEEEEccCCCc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVG-----------VEL-VSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g-----------~~~-~~l~ell~~aDvV~l~~Plt~ 295 (656)
-.+|+|||.|.||..+|.+|...|.+|.+||+.. ..+...+.| +.. .++++ ++.+|+|++++| ..
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk-~~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIP-VQ 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSC-GG
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECC-HH
Confidence 4589999999999999999998899999999874 223333334 333 36778 899999999999 34
Q ss_pred cccccccHHHHhcCC-CCcEEEEcCCC
Q 006212 296 TTSKIFNDETFAKMK-KGVRIVNVARG 321 (656)
Q Consensus 296 ~T~~li~~~~l~~mK-~gailINvaRg 321 (656)
.++.++ ..++ ++.++|++..|
T Consensus 92 ~~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 92 YIREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp GHHHHH-----TTCSSCCSEEEECCCC
T ss_pred HHHHHH-----HHhCcCCCEEEEEeCC
Confidence 444433 3344 78999999865
No 146
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.94 E-value=4.1e-06 Score=86.82 Aligned_cols=104 Identities=20% Similarity=0.185 Sum_probs=71.6
Q ss_pred CEEEEEecChhHHHHHHHHhcC-----C-CEEEEECCCCChhHHHH-cCCeec--------------CHHHHhccCCEEE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-----G-MNVIAHDPYAPADKARA-VGVELV--------------SFDQALATADFIS 288 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-----G-~~Vi~~d~~~~~~~a~~-~g~~~~--------------~l~ell~~aDvV~ 288 (656)
++|+|||+|.||..+|.+|... | .+|.+||+....+...+ .|+... +..+.+..+|+|+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi 88 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYIL 88 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEE
Confidence 4799999999999999999877 8 99999998222334444 565432 2335678999999
Q ss_pred EccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 289 l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
+|+|... +..++ +.....++++.+||++.-| +-.++.+.+.+...
T Consensus 89 l~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~ 133 (317)
T 2qyt_A 89 FCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDT 133 (317)
T ss_dssp ECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTT
T ss_pred EecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCC
Confidence 9999543 44443 2333446788999998765 32245666666543
No 147
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.94 E-value=2.3e-05 Score=80.86 Aligned_cols=110 Identities=15% Similarity=0.247 Sum_probs=82.0
Q ss_pred cccccCCCEEEEEecChh-HHHHHHHHhcC--CCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccc
Q 006212 223 VGVSLVGKTLAVMGFGKV-GSEVARRAKGL--GMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSK 299 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~I-G~~vA~~lk~~--G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~ 299 (656)
.+.++.||++.|||.|.| |+.+|+.|.+. |.+|..++++. .++.+.+++||+|+.+++.. +
T Consensus 152 ~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t------------~~L~~~~~~ADIVI~Avg~p----~ 215 (281)
T 2c2x_A 152 YDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT------------RDLPALTRQADIVVAAVGVA----H 215 (281)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC------------SCHHHHHTTCSEEEECSCCT----T
T ss_pred cCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch------------hHHHHHHhhCCEEEECCCCC----c
Confidence 367899999999999985 99999999998 89999987543 36889999999999999822 3
Q ss_pred cccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEEEEeeccCCCCCCCCCccccCCcEEEcCCCCCCcH
Q 006212 300 IFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQAALDVFTEEPPAKDSKLVQHENVTVTPHLGASTK 374 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~L~~~~nvilTPH~g~~T~ 374 (656)
++..+. +|+|+++||+|.-.+- +| ..-||- .+ ..+...+ +||=-||--.
T Consensus 216 ~I~~~~---vk~GavVIDVgi~r~~----------~g----lvGDVd-~~-------v~~~a~~-iTPVPGGVGp 264 (281)
T 2c2x_A 216 LLTADM---VRPGAAVIDVGVSRTD----------DG----LVGDVH-PD-------VWELAGH-VSPNPGGVGP 264 (281)
T ss_dssp CBCGGG---SCTTCEEEECCEEEET----------TE----EEESBC-GG-------GGGTCSE-EECSSSSSHH
T ss_pred ccCHHH---cCCCcEEEEccCCCCC----------CC----ccCccc-cc-------hhhheee-ecCCCCCccH
Confidence 576655 5999999999955432 13 334664 22 2233444 6997777644
No 148
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.93 E-value=2e-05 Score=81.19 Aligned_cols=105 Identities=17% Similarity=0.116 Sum_probs=73.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHh
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~ 307 (656)
||++.|+|.|.+|++++..|...|.+|.+++|.... +...+.++...+++++- ++|+|+.++|........+..+.+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~~~~~l~-~~DiVInaTp~Gm~~~~~l~~~~l~ 196 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCFMEPPKS-AFDLIINATSASLHNELPLNKEVLK 196 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEESSCCSS-CCSEEEECCTTCCCCSCSSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEecHHHhc-cCCEEEEcccCCCCCCCCCChHHHH
Confidence 899999999999999999999999999999998632 22226676666666644 9999999999764322335554322
Q ss_pred -cCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 308 -KMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 308 -~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
.++++.+++|+.... ...-+.+|-+.|
T Consensus 197 ~~l~~~~~v~D~vY~P--~T~ll~~A~~~G 224 (269)
T 3phh_A 197 GYFKEGKLAYDLAYGF--LTPFLSLAKELK 224 (269)
T ss_dssp HHHHHCSEEEESCCSS--CCHHHHHHHHTT
T ss_pred hhCCCCCEEEEeCCCC--chHHHHHHHHCc
Confidence 467788888887765 444333333333
No 149
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.91 E-value=2e-05 Score=79.06 Aligned_cols=94 Identities=15% Similarity=0.257 Sum_probs=69.1
Q ss_pred EEEEEecChhHHHHHHHHhcCCCEE-EEECCCCChhHHHHcCCeecCHHHHh-ccCCEEEEccCCCccccccccHHHHhc
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGMNV-IAHDPYAPADKARAVGVELVSFDQAL-ATADFISLHMPLNPTTSKIFNDETFAK 308 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~~V-i~~d~~~~~~~a~~~g~~~~~l~ell-~~aDvV~l~~Plt~~T~~li~~~~l~~ 308 (656)
+|||||+|.||+.+++.+...|+++ .+||+....+ . .+.++++++ .++|+|++|+|... . -+.....
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~~---~---~~~~~~~l~~~~~DvVv~~~~~~~-~----~~~~~~~ 70 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEHE---K---MVRGIDEFLQREMDVAVEAASQQA-V----KDYAEKI 70 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCCT---T---EESSHHHHTTSCCSEEEECSCHHH-H----HHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcchh---h---hcCCHHHHhcCCCCEEEECCCHHH-H----HHHHHHH
Confidence 7999999999999999998789997 5789874211 1 345899999 79999999999331 1 1223445
Q ss_pred CCCCcEEEEcCCCchhcH---HHHHHhHhc
Q 006212 309 MKKGVRIVNVARGGVIDE---EALVRALDS 335 (656)
Q Consensus 309 mK~gailINvaRg~ivde---~aL~~aL~~ 335 (656)
++.|..+++...+..-+. +.|.++.++
T Consensus 71 l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~ 100 (236)
T 2dc1_A 71 LKAGIDLIVLSTGAFADRDFLSRVREVCRK 100 (236)
T ss_dssp HHTTCEEEESCGGGGGSHHHHHHHHHHHHH
T ss_pred HHCCCcEEEECcccCChHHHHHHHHHHHHh
Confidence 788999999987766554 456555544
No 150
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.90 E-value=2.9e-05 Score=80.82 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=68.4
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+.++.||++.|||.|. +|+.+|+.|...|.+|..++.+. .++.+.+++||+|+.+++. .+++
T Consensus 159 ~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------~~L~~~~~~ADIVI~Avg~----p~~I 222 (301)
T 1a4i_A 159 TGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT------------AHLDEEVNKGDILVVATGQ----PEMV 222 (301)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHTTCSEEEECCCC----TTCB
T ss_pred cCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc------------ccHHHHhccCCEEEECCCC----cccC
Confidence 46789999999999996 69999999999999999997542 3688999999999999984 2356
Q ss_pred cHHHHhcCCCCcEEEEcCCCch
Q 006212 302 NDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~i 323 (656)
..+. +|+|+++||+|.-.+
T Consensus 223 ~~~~---vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 223 KGEW---IKPGAIVIDCGINYV 241 (301)
T ss_dssp CGGG---SCTTCEEEECCCBC-
T ss_pred CHHH---cCCCcEEEEccCCCc
Confidence 6655 589999999997554
No 151
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.90 E-value=9.8e-06 Score=85.35 Aligned_cols=93 Identities=19% Similarity=0.226 Sum_probs=69.6
Q ss_pred cccccCCCEEEEEecChh-HHHHHHHHhcCCCEEEEECCCCC--hhHHHHcC---Cee--------cCHHHHhccCCEEE
Q 006212 223 VGVSLVGKTLAVMGFGKV-GSEVARRAKGLGMNVIAHDPYAP--ADKARAVG---VEL--------VSFDQALATADFIS 288 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~I-G~~vA~~lk~~G~~Vi~~d~~~~--~~~a~~~g---~~~--------~~l~ell~~aDvV~ 288 (656)
.|.++.|+++.|||.|.| |+.+|+.|.+.|.+|..+|++.. ...+...+ ... .++.+.+++||+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 577899999999999976 99999999999999999987621 11111111 111 35889999999999
Q ss_pred EccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 289 l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
.+++.. ..++..+. +|+|+++||+|.-
T Consensus 251 sAtg~p---~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 251 TGVPSE---NYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp ECCCCT---TCCBCTTT---SCTTEEEEECSSS
T ss_pred ECCCCC---cceeCHHH---cCCCeEEEEcCCC
Confidence 999842 22365554 5999999999853
No 152
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.89 E-value=2.8e-05 Score=80.02 Aligned_cols=77 Identities=10% Similarity=0.136 Sum_probs=65.1
Q ss_pred cCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHH
Q 006212 227 LVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDET 305 (656)
Q Consensus 227 l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 305 (656)
+.||++.|||.|. +|+.+|+.|.+.|++|..++++. .++++.+++||+|+.++|. .+++..+.
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~ 211 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------KDIGSMTRSSKIVVVAVGR----PGFLNREM 211 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SCHHHHHHHSSEEEECSSC----TTCBCGGG
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------ccHHHhhccCCEEEECCCC----CccccHhh
Confidence 8999999999986 79999999999999999997642 3688999999999999984 23566654
Q ss_pred HhcCCCCcEEEEcCCCc
Q 006212 306 FAKMKKGVRIVNVARGG 322 (656)
Q Consensus 306 l~~mK~gailINvaRg~ 322 (656)
+|+|+++||+|.-.
T Consensus 212 ---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 212 ---VTPGSVVIDVGINY 225 (276)
T ss_dssp ---CCTTCEEEECCCEE
T ss_pred ---ccCCcEEEEeccCc
Confidence 59999999998543
No 153
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.89 E-value=6.6e-06 Score=78.75 Aligned_cols=94 Identities=14% Similarity=0.287 Sum_probs=65.7
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcC-CCEEEEECCCC-ChhHHHHcCCeec-----C---HHHH--hccCCEEEEcc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGL-GMNVIAHDPYA-PADKARAVGVELV-----S---FDQA--LATADFISLHM 291 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~-G~~Vi~~d~~~-~~~~a~~~g~~~~-----~---l~el--l~~aDvV~l~~ 291 (656)
+.++.+++++|+|+|.+|+.+|+.|+.. |++|+++|++. ..+.+.+.|+..+ + +.++ +.++|+|++++
T Consensus 34 ~~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 34 LINPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAM 113 (183)
T ss_dssp CBCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECC
T ss_pred CcCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeC
Confidence 3467789999999999999999999998 99999999875 2344555676432 2 3344 67899999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
|....+..++ ..+..+.+...++...
T Consensus 114 ~~~~~~~~~~--~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 114 PHHQGNQTAL--EQLQRRNYKGQIAAIA 139 (183)
T ss_dssp SSHHHHHHHH--HHHHHTTCCSEEEEEE
T ss_pred CChHHHHHHH--HHHHHHCCCCEEEEEE
Confidence 9544333222 2444566565665543
No 154
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.88 E-value=1.6e-05 Score=82.19 Aligned_cols=97 Identities=8% Similarity=0.131 Sum_probs=67.7
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHHHHcCCeec---CHHHHhccCCEEEEccCCC--ccc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKARAVGVELV---SFDQALATADFISLHMPLN--PTT 297 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a~~~g~~~~---~l~ell~~aDvV~l~~Plt--~~T 297 (656)
+..+.||++.|+|.|.+|+.++..|...|. +|.++++...........+... ++.+.++++|+|+.++|.. +..
T Consensus 112 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~ 191 (277)
T 3don_A 112 YEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNT 191 (277)
T ss_dssp STTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCC
Confidence 346789999999999999999999999998 8999998753211111223332 4556688999999999964 222
Q ss_pred cccccHHHHhcCCCCcEEEEcCCCch
Q 006212 298 SKIFNDETFAKMKKGVRIVNVARGGV 323 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINvaRg~i 323 (656)
...+. ...++++.+++|+.....
T Consensus 192 ~~~l~---~~~l~~~~~V~D~vY~P~ 214 (277)
T 3don_A 192 DSVIS---LNRLASHTLVSDIVYNPY 214 (277)
T ss_dssp CCSSC---CTTCCSSCEEEESCCSSS
T ss_pred cCCCC---HHHcCCCCEEEEecCCCC
Confidence 22232 345789999999986543
No 155
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.88 E-value=1e-05 Score=75.03 Aligned_cols=101 Identities=17% Similarity=0.201 Sum_probs=73.7
Q ss_pred cCCCEEEEEec----ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccc
Q 006212 227 LVGKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 227 l~gktvGIIGl----G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+-++|+|||. |.+|..++++++..|++|+.+||.... -.|+... +++++....|++++++| .+....++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i~G~~~~~s~~el~~~vDlvii~vp-~~~v~~v~ 86 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IEGLKCYRSVRELPKDVDVIVFVVP-PKVGLQVA 86 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ETTEECBSSGGGSCTTCCEEEECSC-HHHHHHHH
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----ECCeeecCCHHHhCCCCCEEEEEeC-HHHHHHHH
Confidence 45678999999 999999999999999999999987421 1466654 79999999999999999 55555565
Q ss_pred cHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 302 NDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
. +..+ +..++++++++. ..+++.+..++..+
T Consensus 87 ~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi 117 (138)
T 1y81_A 87 K-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGV 117 (138)
T ss_dssp H-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTC
T ss_pred H-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCC
Confidence 3 3333 666778887753 24556555555433
No 156
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.87 E-value=4.8e-05 Score=79.31 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=69.0
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCCh--hHHHHcCC---eec---CHHHHhccCCEEEEccCCCc
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVGV---ELV---SFDQALATADFISLHMPLNP 295 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~--~~a~~~g~---~~~---~l~ell~~aDvV~l~~Plt~ 295 (656)
.++.|++++|+|.|.+|+.+|..|...|. +|.++|+.... ..+...+. ... ++.+.+.++|+|+.++|...
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 45789999999999999999999999998 99999987522 23334343 333 45567889999999999654
Q ss_pred cc--cc-cccHHHHhcCCCCcEEEEcCCC
Q 006212 296 TT--SK-IFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 296 ~T--~~-li~~~~l~~mK~gailINvaRg 321 (656)
.. .. .+. ...++++.+++|+.-.
T Consensus 217 ~~~~~~~~i~---~~~l~~~~~v~D~~y~ 242 (297)
T 2egg_A 217 HPRVEVQPLS---LERLRPGVIVSDIIYN 242 (297)
T ss_dssp SSCCSCCSSC---CTTCCTTCEEEECCCS
T ss_pred CCCCCCCCCC---HHHcCCCCEEEEcCCC
Confidence 21 11 122 2347889999999864
No 157
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.85 E-value=7.1e-05 Score=78.66 Aligned_cols=88 Identities=20% Similarity=0.380 Sum_probs=67.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhc-CC-CEEEEECCCCChhHHHH----cCCe--ecCHHHHhccCCEEEEccCCCccccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKG-LG-MNVIAHDPYAPADKARA----VGVE--LVSFDQALATADFISLHMPLNPTTSK 299 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~-~G-~~Vi~~d~~~~~~~a~~----~g~~--~~~l~ell~~aDvV~l~~Plt~~T~~ 299 (656)
..++++|||.|.||+.+++.++. ++ -+|.+||++.....+.+ .|+. ..++++++++||+|++|+|.. ..
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~~~~eav~~aDIVi~aT~s~---~p 196 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMAAPADIAAQADIVVTATRST---TP 196 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEECCHHHHHHHCSEEEECCCCS---SC
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEeCHHHHHhhCCEEEEccCCC---Cc
Confidence 36899999999999999999875 44 58999999832232332 3653 349999999999999999954 34
Q ss_pred cccHHHHhcCCCCcEEEEcCCC
Q 006212 300 IFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaRg 321 (656)
++.. ..+|+|+.|+++|..
T Consensus 197 vl~~---~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 197 LFAG---QALRAGAFVGAIGSS 215 (313)
T ss_dssp SSCG---GGCCTTCEEEECCCS
T ss_pred ccCH---HHcCCCcEEEECCCC
Confidence 5553 348999999999864
No 158
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.85 E-value=1.2e-05 Score=84.87 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=66.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee--------------cCHHHHhccCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL--------------VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~--------------~~l~ell~~aDvV~l~~Plt 294 (656)
.++|+|||.|.||..+|.+|...|.+|.++|+....+...+.|... .++++ +..+|+|++|+|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~- 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA- 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-
Confidence 3689999999999999999999999999999853333444555422 25666 5899999999994
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
..+..++. .....++++++|+.+..|
T Consensus 81 ~~~~~~~~-~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 81 PALESVAA-GIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp HHHHHHHG-GGSSSCCTTCEEEECCSS
T ss_pred hhHHHHHH-HHHhhCCCCCEEEEECCC
Confidence 34444432 223346789999999888
No 159
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.81 E-value=5.9e-05 Score=79.01 Aligned_cols=106 Identities=17% Similarity=0.147 Sum_probs=74.8
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCe---------------e-cCHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVE---------------L-VSFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~---------------~-~~l~ell~~aDvV~l~~Pl 293 (656)
++|+|||.|.||..+|..|...|.+|.++++.. .+...+.|+. . .+++++.+.+|+|++++|.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~ 81 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD-YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKV 81 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT-HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh-HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCC
Confidence 589999999999999999998899999999875 3444444421 1 2566666689999999994
Q ss_pred CccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeE
Q 006212 294 NPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (656)
Q Consensus 294 t~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~ 339 (656)
. .+...+ +.....++++++||.+.-| +-.++.+.+.+....+.
T Consensus 82 ~-~~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 82 V-EGADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp C-TTCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred C-ChHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 4 344443 3333457888999988765 32346666666554443
No 160
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.79 E-value=4.7e-05 Score=63.86 Aligned_cols=70 Identities=13% Similarity=0.123 Sum_probs=54.6
Q ss_pred EEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEE--eCCCC-CHHHHHHHhcCCCccEEEEEe
Q 006212 560 LILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIG--VDEEP-NQDSLKEIGKVPAIEEYTLLH 631 (656)
Q Consensus 560 ~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~--~D~~~-~~e~l~~L~~~~~V~~v~~v~ 631 (656)
.|.+...|+||+++.|+++|+++|+||.++.+.+.. + .+.+.+. +.+.. -++++++|+++++|.++..+.
T Consensus 7 ~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~-~-~~~~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~~~ 79 (88)
T 2ko1_A 7 GIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKD-G-IFTCNLMIFVKNTDKLTTLMDKLRKVQGVFTVERLS 79 (88)
T ss_dssp EEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECS-S-EEEEEEEEEESSHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred EEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcC-C-EEEEEEEEEECCHHHHHHHHHHHhcCCCceEEEEec
Confidence 345678999999999999999999999999997643 2 5555544 43322 248999999999999987764
No 161
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.77 E-value=3.9e-05 Score=71.59 Aligned_cols=99 Identities=15% Similarity=0.136 Sum_probs=61.8
Q ss_pred ccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHH-HcCCeec-----C---HHHH-hccCCEEEEc
Q 006212 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-AVGVELV-----S---FDQA-LATADFISLH 290 (656)
Q Consensus 222 ~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~-~~g~~~~-----~---l~el-l~~aDvV~l~ 290 (656)
.+...+.++++.|+|+|.+|+.+|+.|+..|.+|+++|++.. .+.+. ..|...+ + +.+. +..+|+|+++
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 356678899999999999999999999999999999998752 23333 4455332 2 2223 6789999999
Q ss_pred cCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 291 MPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 291 ~Plt~~T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
+|....+. . -......+.+...++-..++.
T Consensus 92 ~~~~~~~~-~-~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 92 TNDDSTNF-F-ISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp SSCHHHHH-H-HHHHHHHTSCCSEEEEECSSG
T ss_pred eCCcHHHH-H-HHHHHHHHCCCCeEEEEECCH
Confidence 98432211 1 122333344455555554443
No 162
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.74 E-value=4.3e-06 Score=85.90 Aligned_cols=85 Identities=9% Similarity=0.051 Sum_probs=55.3
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEE-EEECCCCC-hhHH-HHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNV-IAHDPYAP-ADKA-RAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~V-i~~d~~~~-~~~a-~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
.+|||||+|+||+.+|+.+... ++| .+||++.. .+.+ ...|....++++++++||+|++|+|... . .+.+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~DvVilav~~~~-~-----~~v~ 75 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRY-I-----KTVA 75 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTTT-H-----HHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCCccCCHHHHHhcCCEEEEeCChHH-H-----HHHH
Confidence 3699999999999999999876 888 48998752 2222 3446522367788899999999999442 2 3333
Q ss_pred hcC-CCCcEEEEcCCC
Q 006212 307 AKM-KKGVRIVNVARG 321 (656)
Q Consensus 307 ~~m-K~gailINvaRg 321 (656)
..+ +++.+|||++-+
T Consensus 76 ~~l~~~~~ivi~~s~~ 91 (276)
T 2i76_A 76 NHLNLGDAVLVHCSGF 91 (276)
T ss_dssp TTTCCSSCCEEECCSS
T ss_pred HHhccCCCEEEECCCC
Confidence 334 688999999844
No 163
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.71 E-value=6e-05 Score=76.88 Aligned_cols=100 Identities=17% Similarity=0.233 Sum_probs=72.3
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHHHHc----CC-eecCHHHHhccCCEEEEccCCC--cccc
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKARAV----GV-ELVSFDQALATADFISLHMPLN--PTTS 298 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a~~~----g~-~~~~l~ell~~aDvV~l~~Plt--~~T~ 298 (656)
+.| +++|||.|.+|++++..|...|. +|.++|++. ++++++ +. .+.++.+.++++|+|+.++|.. ++ .
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~--~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~-~ 182 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI--ERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGE-E 182 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH--HHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSC-C
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH--HHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCC-C
Confidence 578 99999999999999999999998 899999874 233322 11 2336778899999999999964 22 2
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
..+..+. ++++.+++|+.-+ ...-+.++.+.|
T Consensus 183 ~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 183 LPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp CSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred CCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 2344333 5789999999877 444444555444
No 164
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.70 E-value=0.00011 Score=76.56 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=74.7
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee---------------cCHHHHhccCCEEEEccCCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL---------------VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~---------------~~l~ell~~aDvV~l~~Plt 294 (656)
++|+|||.|.||..+|..|...|.+|.++++.. .+...+.|+.. .+.++ +..+|+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~-~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~~ 80 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD-YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKTF 80 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT-HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc-HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCCC
Confidence 579999999999999999998899999999875 44444555421 24444 68999999999943
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeEE
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVAQ 340 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~g 340 (656)
.+...+ +..-..++++++||.+.-| +-.++.+.+.+...++.+
T Consensus 81 -~~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~ 123 (312)
T 3hn2_A 81 -ANSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIG 123 (312)
T ss_dssp -GGGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEE
T ss_pred -CcHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEE
Confidence 344443 2333457889999998866 223566767666555544
No 165
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.68 E-value=1.9e-05 Score=73.81 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=73.3
Q ss_pred CCEEEEEec----ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccH
Q 006212 229 GKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 229 gktvGIIGl----G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
-++|+|||+ |.+|..++++++..|++|+.+||....+. -.|+... +++++....|++++++| .+....++.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~--i~G~~~~~sl~el~~~~Dlvii~vp-~~~v~~v~~- 88 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT--LLGQQGYATLADVPEKVDMVDVFRN-SEAAWGVAQ- 88 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE--ETTEECCSSTTTCSSCCSEEECCSC-STHHHHHHH-
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc--cCCeeccCCHHHcCCCCCEEEEEeC-HHHHHHHHH-
Confidence 568999999 89999999999998999999998751011 1466554 78898889999999999 455566653
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
+..+ ...+.++++.+ .. ++++.+.+++..+
T Consensus 89 ~~~~-~g~~~i~i~~~--~~--~~~l~~~a~~~Gi 118 (145)
T 2duw_A 89 EAIA-IGAKTLWLQLG--VI--NEQAAVLAREAGL 118 (145)
T ss_dssp HHHH-HTCCEEECCTT--CC--CHHHHHHHHTTTC
T ss_pred HHHH-cCCCEEEEcCC--hH--HHHHHHHHHHcCC
Confidence 2333 56667877764 22 5666666776544
No 166
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.67 E-value=3.7e-05 Score=70.62 Aligned_cols=89 Identities=19% Similarity=0.333 Sum_probs=62.0
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-----C---HHH-HhccCCEEEEccCCCcccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-----S---FDQ-ALATADFISLHMPLNPTTS 298 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-----~---l~e-ll~~aDvV~l~~Plt~~T~ 298 (656)
.+++.|+|+|.+|+.+|+.|+..|++|+++|++. ..+.+.+.|+..+ + +.+ -+.++|+|++++|...++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~ 86 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAG 86 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHH
Confidence 3479999999999999999999999999999875 3344556677532 2 222 2578999999999554433
Q ss_pred ccccHHHHhcCCCCcEEEEcC
Q 006212 299 KIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINva 319 (656)
.+. ..+..+.++..+|--.
T Consensus 87 ~~~--~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 87 EIV--ASARAKNPDIEIIARA 105 (140)
T ss_dssp HHH--HHHHHHCSSSEEEEEE
T ss_pred HHH--HHHHHHCCCCeEEEEE
Confidence 222 2344455666666443
No 167
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.65 E-value=0.00011 Score=78.33 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=66.2
Q ss_pred CCCEEEEEecChhHHHHHHHHh-cCC-CEEEEECCCCC-hh-HHHHc----CC--ee-cCHHHHhccCCEEEEccCCCcc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAK-GLG-MNVIAHDPYAP-AD-KARAV----GV--EL-VSFDQALATADFISLHMPLNPT 296 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk-~~G-~~Vi~~d~~~~-~~-~a~~~----g~--~~-~~l~ell~~aDvV~l~~Plt~~ 296 (656)
..++++|||.|.+|+.+++.+. ..+ .+|.+||++.. .+ .+... |+ .. .++++++++||+|++|+|.. .
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~-~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADK-A 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCS-S
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCC-C
Confidence 4679999999999999998875 344 68999998752 22 22222 53 22 37999999999999999965 2
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCC
Q 006212 297 TSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 297 T~~li~~~~l~~mK~gailINvaRg 321 (656)
...++.. ..+++|+.+++++..
T Consensus 207 ~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 207 YATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp EEEEECG---GGCCTTCEEEECSCC
T ss_pred CCceecH---HHcCCCCEEEECCCC
Confidence 3345543 357999999999864
No 168
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.61 E-value=8.2e-05 Score=77.98 Aligned_cols=103 Identities=18% Similarity=0.227 Sum_probs=69.7
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCe-------------e-cCHHHHhccCCEEEEcc
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVE-------------L-VSFDQALATADFISLHM 291 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~-------------~-~~l~ell~~aDvV~l~~ 291 (656)
-..++|+|||.|.||..+|..|...|.+|..| ++. ..+...+.|.. . .++++ +..+|+|++++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilav 94 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCV 94 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEc
Confidence 34678999999999999999999999999999 553 23334444432 1 24444 68999999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHh
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALD 334 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~ 334 (656)
|.. .++.++ +.....++++++|+.+..|= -.++.+.+.+.
T Consensus 95 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi-~~~~~l~~~~~ 134 (318)
T 3hwr_A 95 KST-DTQSAA-LAMKPALAKSALVLSLQNGV-ENADTLRSLLE 134 (318)
T ss_dssp CGG-GHHHHH-HHHTTTSCTTCEEEEECSSS-SHHHHHHHHCC
T ss_pred ccc-cHHHHH-HHHHHhcCCCCEEEEeCCCC-CcHHHHHHHcC
Confidence 944 444444 23334578899999987663 22355666554
No 169
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.61 E-value=0.00013 Score=65.68 Aligned_cols=88 Identities=15% Similarity=0.229 Sum_probs=57.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHH-HcCCeec-----CHHHH----hccCCEEEEccCCCccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-AVGVELV-----SFDQA----LATADFISLHMPLNPTT 297 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~-~~g~~~~-----~l~el----l~~aDvV~l~~Plt~~T 297 (656)
+++++|+|+|.+|+.+|+.|...|.+|.++|++.. .+... ..++... +.+.+ +.++|+|++++|.....
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 57899999999999999999999999999998642 22222 2365321 23222 67899999999843221
Q ss_pred cccccHHHHhcCCCCcEEEEc
Q 006212 298 SKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINv 318 (656)
..-......++++.+++-+
T Consensus 84 --~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 84 --LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp --HHHHHHHHHTTCCCEEEEC
T ss_pred --HHHHHHHHHcCCCEEEEEe
Confidence 1112234446666555543
No 170
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.49 E-value=0.00011 Score=64.03 Aligned_cols=87 Identities=22% Similarity=0.224 Sum_probs=60.8
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCC-CEEEEECCCCC-hhHHHHcCCeec--------CHHHHhccCCEEEEccCCCccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYAP-ADKARAVGVELV--------SFDQALATADFISLHMPLNPTT 297 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G-~~Vi~~d~~~~-~~~a~~~g~~~~--------~l~ell~~aDvV~l~~Plt~~T 297 (656)
.+++++|+|.|.||+.+++.|...| ++|+++|+... .+.....++... ++.++++++|+|+.++|... +
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-T 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-H
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-h
Confidence 3679999999999999999999999 89999998752 233333454321 35567889999999998432 1
Q ss_pred cccccHHHHhcCCCCcEEEEcC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINva 319 (656)
..++ -...+.|...++.+
T Consensus 83 ~~~~----~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 83 PIIA----KAAKAAGAHYFDLT 100 (118)
T ss_dssp HHHH----HHHHHTTCEEECCC
T ss_pred HHHH----HHHHHhCCCEEEec
Confidence 1111 11235677788876
No 171
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.47 E-value=9.1e-05 Score=76.72 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=65.8
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCCh--hHHHHcC----CeecCHHHHhccCCEEEEccCCCcc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVG----VELVSFDQALATADFISLHMPLNPT 296 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~--~~a~~~g----~~~~~l~ell~~aDvV~l~~Plt~~ 296 (656)
+.++.||++.|+|.|.+|+.++..|...|. +|.++++.... +.+.+.+ +...+++++..++|+|+.++|....
T Consensus 121 ~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~ 200 (281)
T 3o8q_A 121 QVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLD 200 (281)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC-
T ss_pred CCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCC
Confidence 456889999999999999999999999996 99999987522 2222222 3445677777899999999996532
Q ss_pred cc-ccccHHHHhcCCCCcEEEEcCCC
Q 006212 297 TS-KIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 297 T~-~li~~~~l~~mK~gailINvaRg 321 (656)
.. ..+.. ..++++.+++|+.-.
T Consensus 201 ~~~~~l~~---~~l~~~~~V~DlvY~ 223 (281)
T 3o8q_A 201 GELPAIDP---VIFSSRSVCYDMMYG 223 (281)
T ss_dssp ---CSCCG---GGEEEEEEEEESCCC
T ss_pred CCCCCCCH---HHhCcCCEEEEecCC
Confidence 11 11222 235666777776643
No 172
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.42 E-value=0.00036 Score=73.51 Aligned_cols=86 Identities=13% Similarity=0.121 Sum_probs=63.2
Q ss_pred CCCEEEEEecChhHHHHHHHHhc-C-CCEEEEECCCCCh-h-HHHHc-----CCeecCHHHHhccCCEEEEccCCCcccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKG-L-GMNVIAHDPYAPA-D-KARAV-----GVELVSFDQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~-~-G~~Vi~~d~~~~~-~-~a~~~-----g~~~~~l~ell~~aDvV~l~~Plt~~T~ 298 (656)
..++++|||.|.+|+.+++.+.. + .-+|.+||++... + .+... .+...++++++ ++|+|++|+|.. .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~~~~~~e~v-~aDvVi~aTp~~---~ 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEAS-RCDVLVTTTPSR---K 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHT-SSSEEEECCCCS---S
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEEECCHHHHh-CCCEEEEeeCCC---C
Confidence 46799999999999999999875 4 4689999987522 2 22221 13344799999 999999999954 2
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaR 320 (656)
.++.. ..+++|+.+++++.
T Consensus 200 pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 200 PVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp CCBCG---GGCCTTCEEEECSC
T ss_pred ceecH---HHcCCCeEEEECCC
Confidence 44543 35789999998864
No 173
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.41 E-value=0.00034 Score=71.61 Aligned_cols=95 Identities=13% Similarity=0.118 Sum_probs=65.2
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHHHHcC----CeecCHHHHh-ccCCEEEEccCCCccc
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG----VELVSFDQAL-ATADFISLHMPLNPTT 297 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g----~~~~~l~ell-~~aDvV~l~~Plt~~T 297 (656)
..+.||++.|+|.|.+|+.+|+.|...|.+|.++|+.... +.+...+ +...+++++. .++|+|+.++|.....
T Consensus 115 ~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~ 194 (271)
T 1nyt_A 115 FIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG 194 (271)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCC
Confidence 4578999999999999999999999999999999987522 2222322 2233444544 5899999999965321
Q ss_pred c-ccccHHHHhcCCCCcEEEEcCCCc
Q 006212 298 S-KIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 298 ~-~li~~~~l~~mK~gailINvaRg~ 322 (656)
. .-+.. ..++++.+++|+.-..
T Consensus 195 ~~~~i~~---~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 195 DIPAIPS---SLIHPGIYCYDMFYQK 217 (271)
T ss_dssp CCCCCCG---GGCCTTCEEEESCCCS
T ss_pred CCCCCCH---HHcCCCCEEEEeccCC
Confidence 0 01222 2257788888887543
No 174
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.40 E-value=0.00016 Score=65.93 Aligned_cols=65 Identities=17% Similarity=0.143 Sum_probs=48.9
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-----CHHHH----hccCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-----SFDQA----LATADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-----~l~el----l~~aDvV~l~~P 292 (656)
.++++.|+|+|.+|+.+|+.|...|++|+++|++. ..+.+.+.|+... +.+.+ +.++|+|++++|
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 35789999999999999999999999999999875 2334455565432 22222 468999999988
No 175
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.37 E-value=0.00013 Score=78.15 Aligned_cols=91 Identities=15% Similarity=0.166 Sum_probs=61.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHH-cCCe------ecCHHHHhccCCEEEEccCCCc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARA-VGVE------LVSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~-~g~~------~~~l~ell~~aDvV~l~~Plt~ 295 (656)
..+-++++|+|||+|.||+.+|+.|... .+|.++|++... +...+ .+.. ..+++++++++|+|+.|+|...
T Consensus 11 ~~~~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~ 89 (365)
T 2z2v_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHH
T ss_pred cccCCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhh
Confidence 3466799999999999999999999877 899999987522 11111 1111 1247788999999999998432
Q ss_pred cccccccHHHHhcCCCCcEEEEcCC
Q 006212 296 TTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 296 ~T~~li~~~~l~~mK~gailINvaR 320 (656)
. . .-..+.++.|+.++|++-
T Consensus 90 ~-~----~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 90 G-F----KSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp H-H----HHHHHHHHTTCCEEECCC
T ss_pred h-H----HHHHHHHHhCCeEEEccC
Confidence 1 1 112334678888999874
No 176
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.36 E-value=0.00028 Score=76.12 Aligned_cols=87 Identities=20% Similarity=0.174 Sum_probs=60.4
Q ss_pred CEEEEEecChhHHHHHHHHhc-CCCEEEEEC---CCC-ChhH-HHHcC------------C------e-e-cCHHHHhcc
Q 006212 230 KTLAVMGFGKVGSEVARRAKG-LGMNVIAHD---PYA-PADK-ARAVG------------V------E-L-VSFDQALAT 283 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~-~G~~Vi~~d---~~~-~~~~-a~~~g------------~------~-~-~~l~ell~~ 283 (656)
++|+|||.|.||..+|..|.. .|.+|.+|| +.. ..+. ..+.| . . . .++++.++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 479999999999999999976 599999999 432 1122 11112 1 1 2 268888999
Q ss_pred CCEEEEccCCCccccccccHHHHhcCCCCcEEEEc
Q 006212 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 284 aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINv 318 (656)
||+|++++|.. ....++ ++....++++++|++.
T Consensus 83 aD~Vilav~~~-~~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 83 ADVVILTVPAF-AHEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CSEEEECSCGG-GHHHHH-HHHTTTCCTTCEEEET
T ss_pred CCEEEEeCchH-HHHHHH-HHHHhhCCCCcEEEEc
Confidence 99999999943 333333 2233447888999985
No 177
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=97.35 E-value=0.00022 Score=74.42 Aligned_cols=104 Identities=15% Similarity=0.146 Sum_probs=68.8
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecC----------H-HHHhccCCEEEEccCCCccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVS----------F-DQALATADFISLHMPLNPTT 297 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~----------l-~ell~~aDvV~l~~Plt~~T 297 (656)
++|+|||.|.||..+|..|. .|.+|.++++.. ..+...+.|+...+ . ++....+|+|++++|.. .+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~-~~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH-QL 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG-GH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH-HH
Confidence 68999999999999999999 899999999875 33444555654321 0 24567899999999943 33
Q ss_pred cccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCeE
Q 006212 298 SKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVVA 339 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i~ 339 (656)
...+ +.++.+.+++ ||.+.-|= -.++.+.+.+...++.
T Consensus 81 ~~~l--~~l~~~~~~~-ivs~~nGi-~~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 81 QSVF--SSLERIGKTN-ILFLQNGM-GHIHDLKDWHVGHSIY 118 (307)
T ss_dssp HHHH--HHTTSSCCCE-EEECCSSS-HHHHHHHTCCCSCEEE
T ss_pred HHHH--HHhhcCCCCe-EEEecCCc-cHHHHHHHhCCCCcEE
Confidence 3333 2333345666 78776553 2344555555544443
No 178
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.33 E-value=0.00015 Score=65.49 Aligned_cols=93 Identities=16% Similarity=0.277 Sum_probs=57.4
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeec-----CHH---HH-hccCCEEEEccCCCcc
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV-----SFD---QA-LATADFISLHMPLNPT 296 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~-----~l~---el-l~~aDvV~l~~Plt~~ 296 (656)
+.++++.|+|+|.+|+.+++.|...|++|+++|+... .+.+.+.+.... +.+ ++ +.++|+|+.++|...+
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 4578899999999999999999999999999998642 222223344321 222 22 5789999999985322
Q ss_pred ccccccHHHHhcCCCCcEEEEcCCC
Q 006212 297 TSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 297 T~~li~~~~l~~mK~gailINvaRg 321 (656)
+. +.-......+.+. .++-...+
T Consensus 84 ~~-~~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 84 AS-TLTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp HH-HHHHHHHHHTTCS-EEEEECCS
T ss_pred HH-HHHHHHHHHcCCC-eEEEEeCC
Confidence 11 1112233445555 44444443
No 179
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.33 E-value=0.00019 Score=73.59 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=52.3
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHHHHcC----CeecCHHHHhc-cCCEEEEccCCCc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG----VELVSFDQALA-TADFISLHMPLNP 295 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g----~~~~~l~ell~-~aDvV~l~~Plt~ 295 (656)
+..+.||+++|+|.|.+|+++|..|...|.+|.++|++... +.+...+ +...+++++.+ ++|+|+.++|...
T Consensus 114 ~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 114 NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 34678999999999999999999999999999999987521 2222221 22335555444 8999999999553
No 180
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.30 E-value=0.00043 Score=72.48 Aligned_cols=64 Identities=22% Similarity=0.390 Sum_probs=52.2
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCC--hhHHHHcCCeecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAP--ADKARAVGVELVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~~~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+..++.++.. ++++. ++|+... ...+...|+.+.+++++++ ++|+|++|+|.
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCEVRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCEECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCCcCCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999875 78887 5898752 2334556777668999998 89999999994
No 181
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.30 E-value=0.0015 Score=76.25 Aligned_cols=130 Identities=19% Similarity=0.251 Sum_probs=87.9
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHH---------------cC-------CeecCHHHHhccCCE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARA---------------VG-------VELVSFDQALATADF 286 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~---------------~g-------~~~~~l~ell~~aDv 286 (656)
++|||||.|.||..+|..+...|++|+.+|.... .+.+.+ .+ +...+-.+.+++||+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aDl 396 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELSTVDL 396 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGGGSCSE
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHHhhCCE
Confidence 6999999999999999999999999999998742 111110 00 012222345889999
Q ss_pred EEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc-CCeEEEEeeccCCCCCCCCCccccCCcEEE
Q 006212 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDS-GVVAQAALDVFTEEPPAKDSKLVQHENVTV 365 (656)
Q Consensus 287 V~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~-g~i~gA~lDV~~~EP~~~~~~L~~~~nvil 365 (656)
|+=++|-..+.++-+-++.=+.++++++|-...++= ....|.++++. .++ .|++.|.+-| .-||.| ||-
T Consensus 397 VIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl--~i~~ia~~~~~p~r~--ig~HFfnP~~---~m~LVE---vi~ 466 (742)
T 3zwc_A 397 VVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDRPQLV--IGTHFFSPAH---VMRLLE---VIP 466 (742)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSCGGGE--EEEECCSSTT---TCCEEE---EEE
T ss_pred EEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcC--ChHHHHhhcCCcccc--ccccccCCCC---CCceEE---Eec
Confidence 999999777766555455555689999887655443 34456555543 344 6777775332 357775 777
Q ss_pred cCCC
Q 006212 366 TPHL 369 (656)
Q Consensus 366 TPH~ 369 (656)
+|+.
T Consensus 467 g~~T 470 (742)
T 3zwc_A 467 SRYS 470 (742)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 7764
No 182
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.30 E-value=0.00062 Score=70.09 Aligned_cols=95 Identities=9% Similarity=0.112 Sum_probs=66.3
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCCh--hHHHHcC---CeecCHHHHh-ccCCEEEEccCCCcc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVG---VELVSFDQAL-ATADFISLHMPLNPT 296 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~--~~a~~~g---~~~~~l~ell-~~aDvV~l~~Plt~~ 296 (656)
+.++.||++.|+|.|.+|+.++..|...|. +|.++++.... +.+.+.+ +...+++++- .++|+|+.++|..-.
T Consensus 115 ~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~ 194 (272)
T 3pwz_A 115 GEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLT 194 (272)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGG
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCC
Confidence 456889999999999999999999999996 99999987522 2233333 3444566654 789999999996432
Q ss_pred cc-ccccHHHHhcCCCCcEEEEcCCC
Q 006212 297 TS-KIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 297 T~-~li~~~~l~~mK~gailINvaRg 321 (656)
.. ..+.. +.++++.+++|+.-.
T Consensus 195 ~~~~~i~~---~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 195 ADLPPLPA---DVLGEAALAYELAYG 217 (272)
T ss_dssp TCCCCCCG---GGGTTCSEEEESSCS
T ss_pred CCCCCCCH---HHhCcCCEEEEeecC
Confidence 11 12322 235677777777644
No 183
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.22 E-value=0.00061 Score=71.73 Aligned_cols=64 Identities=27% Similarity=0.390 Sum_probs=50.8
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCCh--hHHHHcCCee-cCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~--~~a~~~g~~~-~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+.+++.++.. ++++. ++|+.... ..+...|+.. .++++++. ++|+|++|+|.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCc
Confidence 4799999999999999999876 78877 58887522 2344556654 48999998 89999999994
No 184
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.21 E-value=0.00025 Score=76.53 Aligned_cols=83 Identities=20% Similarity=0.307 Sum_probs=68.9
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCC---EEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccH
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGM---NVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~---~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
..-+|.|||. |..|..-++.++++|. .|.++|.+.. ..|.. + +.+.++|+|+.|+......-.++.+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~-----~~g~~---~-~~i~~aDivIn~vlig~~aP~Lvt~ 283 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKET-----SRGGP---F-DEIPQADIFINCIYLSKPIAPFTNM 283 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHH-----TTCSC---C-THHHHSSEEEECCCCCSSCCCSCCH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecccc-----ccCCc---h-hhHhhCCEEEECcCcCCCCCcccCH
Confidence 4568999999 9999999999999998 8999997531 11332 2 3466999999999986666789999
Q ss_pred HHHhcC-CCCcEEEEcC
Q 006212 304 ETFAKM-KKGVRIVNVA 319 (656)
Q Consensus 304 ~~l~~m-K~gailINva 319 (656)
+.++.| |||++|||++
T Consensus 284 e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 284 EKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp HHHCCTTCCCCEEEETT
T ss_pred HHHhcCcCCCeEEEEEe
Confidence 999999 9999999996
No 185
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.17 E-value=0.00065 Score=71.89 Aligned_cols=65 Identities=9% Similarity=0.186 Sum_probs=51.3
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCCh--hHHHHcCCee-cCHHHHh--ccCCEEEEccCCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVEL-VSFDQAL--ATADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~--~~a~~~g~~~-~~l~ell--~~aDvV~l~~Plt 294 (656)
.+|||||+|.||+..++.++.. ++++. ++|++... ..+...|+.. .++++++ .+.|+|++|+|..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPND 77 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTT
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChH
Confidence 4799999999999999999977 88876 57887522 2345557754 4899999 6799999999943
No 186
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.16 E-value=0.00047 Score=65.81 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=61.2
Q ss_pred ccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC--CCHHHHHHHhcCCCccEEEEEe
Q 006212 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE--PNQDSLKEIGKVPAIEEYTLLH 631 (656)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~--~~~e~l~~L~~~~~V~~v~~v~ 631 (656)
.|.|-+...|+||++++|+.+|+++|+||.++.+......+.+.+.+.++.. .-+.+.++|.++++|.+|.-+.
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~Kl~dV~~V~r~~ 78 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELG 78 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEGG
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 3677788899999999999999999999999999876555678787777643 2347888999999999987665
No 187
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.15 E-value=0.00063 Score=71.19 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=64.2
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHHH--H-------c--C--Cee-cCHHHHhccCCEEEEccCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKAR--A-------V--G--VEL-VSFDQALATADFISLHMPL 293 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a~--~-------~--g--~~~-~~l~ell~~aDvV~l~~Pl 293 (656)
.++|+|||.|.||..+|..+...|+ +|..||+........ + . . +.. .++ +.+++||+|+++++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~ 82 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASI 82 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCC
Confidence 4689999999999999999987787 999999875321110 0 0 1 222 356 678999999999952
Q ss_pred Cccccccc-------c----H---HHHhcCCCCcEEEEcCCCchhcHHHHHH
Q 006212 294 NPTTSKIF-------N----D---ETFAKMKKGVRIVNVARGGVIDEEALVR 331 (656)
Q Consensus 294 t~~T~~li-------~----~---~~l~~mK~gailINvaRg~ivde~aL~~ 331 (656)
+...++- + . +.+....|++++++++-..-+....+.+
T Consensus 83 -p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~~~ 133 (317)
T 2ewd_A 83 -PGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHFQK 133 (317)
T ss_dssp -SSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHH
T ss_pred -CCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Confidence 2211110 0 1 1122235689999988644333444444
No 188
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.15 E-value=0.0011 Score=69.02 Aligned_cols=79 Identities=16% Similarity=0.237 Sum_probs=65.3
Q ss_pred cccccCCCEEEEEecCh-hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccc
Q 006212 223 VGVSLVGKTLAVMGFGK-VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIF 301 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~-IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li 301 (656)
.+.++.||++.|||-+. +|+++|..|...|..|..+..+. .+|.+.+++||+|+.++.. .+++
T Consensus 173 ~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T------------~dl~~~~~~ADIvV~A~G~----p~~i 236 (303)
T 4b4u_A 173 NNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT------------QNLPELVKQADIIVGAVGK----AELI 236 (303)
T ss_dssp TTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------SSHHHHHHTCSEEEECSCS----TTCB
T ss_pred HCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC------------CCHHHHhhcCCeEEeccCC----CCcc
Confidence 46789999999999886 59999999999999999876542 2588889999999998862 3466
Q ss_pred cHHHHhcCCCCcEEEEcCC
Q 006212 302 NDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 302 ~~~~l~~mK~gailINvaR 320 (656)
..+. .|+|+++||+|-
T Consensus 237 ~~d~---vk~GavVIDVGi 252 (303)
T 4b4u_A 237 QKDW---IKQGAVVVDAGF 252 (303)
T ss_dssp CGGG---SCTTCEEEECCC
T ss_pred cccc---ccCCCEEEEece
Confidence 6654 599999999983
No 189
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.14 E-value=0.0012 Score=68.36 Aligned_cols=93 Identities=17% Similarity=0.182 Sum_probs=61.8
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHHHHcCCeecCHHHH--hccCCEEEEccCCC--cccc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKARAVGVELVSFDQA--LATADFISLHMPLN--PTTS 298 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a~~~g~~~~~l~el--l~~aDvV~l~~Plt--~~T~ 298 (656)
+.++.||++.|+|.|.+|++++..|...|. +|.+++|...........+...+++++ + ++|+|+.++|.. +...
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~l-~~DivInaTp~Gm~~~~~ 195 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSNL-KGDVIINCTPKGMYPKEG 195 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTTC-CCSEEEECSSTTSTTSTT
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHhc-cCCEEEECCccCccCCCc
Confidence 456889999999999999999999999998 999999874222122222323333333 4 899999999963 2111
Q ss_pred -ccccHHHHhcCCCCcEEEEcCC
Q 006212 299 -KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 299 -~li~~~~l~~mK~gailINvaR 320 (656)
-.+..+. ++++.+++|+.-
T Consensus 196 ~~pi~~~~---l~~~~~v~DlvY 215 (282)
T 3fbt_A 196 ESPVDKEV---VAKFSSAVDLIY 215 (282)
T ss_dssp CCSSCHHH---HTTCSEEEESCC
T ss_pred cCCCCHHH---cCCCCEEEEEee
Confidence 1233333 456677777653
No 190
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.11 E-value=0.0028 Score=68.21 Aligned_cols=94 Identities=24% Similarity=0.264 Sum_probs=74.9
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCC----CCh----------hHHHHcCC--eecCHHHHhccCC
Q 006212 223 VGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPY----APA----------DKARAVGV--ELVSFDQALATAD 285 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~----~~~----------~~a~~~g~--~~~~l~ell~~aD 285 (656)
.|..+.+.+|.|+|.|..|..+|+.+.+.|. +|+.+|+. ... ..+..... ...+|.+.++.+|
T Consensus 186 ~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~AD 265 (388)
T 1vl6_A 186 TEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGAD 265 (388)
T ss_dssp HTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCS
T ss_pred hCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCC
Confidence 3568899999999999999999999999998 89999987 211 11222121 1347999999999
Q ss_pred EEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 286 FISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 286 vV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
+++-+.- -+++.++.++.|+++++|+++++-
T Consensus 266 VlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNP 296 (388)
T 1vl6_A 266 FFIGVSR-----GNILKPEWIKKMSRKPVIFALANP 296 (388)
T ss_dssp EEEECSC-----SSCSCHHHHTTSCSSCEEEECCSS
T ss_pred EEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCC
Confidence 9987642 388999999999999999999963
No 191
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.10 E-value=0.00075 Score=70.32 Aligned_cols=63 Identities=21% Similarity=0.314 Sum_probs=47.3
Q ss_pred CEEEEEecChhHHHHHHHHhcCC--CEEEEECCCCC-hh-HHHHc---------CCee--cCHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG--MNVIAHDPYAP-AD-KARAV---------GVEL--VSFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G--~~Vi~~d~~~~-~~-~a~~~---------g~~~--~~l~ell~~aDvV~l~~Pl 293 (656)
++|+|||.|.||..+|..|...| .+|..||+... .+ .+.+. .+.. .++ +.+++||+|++++|.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~ 79 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGN 79 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCC
Confidence 58999999999999999998777 69999998742 11 11111 1232 356 678999999999995
No 192
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.09 E-value=0.00059 Score=74.90 Aligned_cols=94 Identities=19% Similarity=0.181 Sum_probs=63.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHH--------------------HHcC-Cee-cCHHHHhccCCE
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKA--------------------RAVG-VEL-VSFDQALATADF 286 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a--------------------~~~g-~~~-~~l~ell~~aDv 286 (656)
-++|+|||+|.+|..+|..+...|++|+++|.+...-.. .+.| ..+ .+.++.+++||+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~ 100 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA 100 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence 368999999999999999999899999999975321111 1112 223 368888999999
Q ss_pred EEEccCCCccccc-------ccc--HHHHhcCC---CCcEEEEcCCCch
Q 006212 287 ISLHMPLNPTTSK-------IFN--DETFAKMK---KGVRIVNVARGGV 323 (656)
Q Consensus 287 V~l~~Plt~~T~~-------li~--~~~l~~mK---~gailINvaRg~i 323 (656)
+++|+| ||.... +.. +..-..|+ ++.++|.-+.-.+
T Consensus 101 ~~I~Vp-TP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVpp 148 (444)
T 3vtf_A 101 TFIAVG-TPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPP 148 (444)
T ss_dssp EEECCC-CCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCT
T ss_pred eEEEec-CCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCC
Confidence 999999 543221 111 11222343 6789999887444
No 193
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.05 E-value=0.0015 Score=68.51 Aligned_cols=64 Identities=19% Similarity=0.192 Sum_probs=46.7
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCC-hhH-HHH--c------CC--eecCHHHHhccCCEEEEccCCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAP-ADK-ARA--V------GV--ELVSFDQALATADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~-~~~-a~~--~------g~--~~~~l~ell~~aDvV~l~~Plt 294 (656)
++|+|||.|.||..+|..|...|+ +|..+|+... .+. ... . .. ...+ .+.+++||+|++++|..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~ 78 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVP 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCC
Confidence 479999999999999999988788 9999998742 111 111 1 11 1224 35678999999999953
No 194
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.04 E-value=0.00097 Score=69.95 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=51.3
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccCCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~Plt 294 (656)
.+|||||+|.||+.+++.++.. +++|. ++|++.. ...+...|+. +.++++++. ++|+|++|+|..
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~ 78 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQ 78 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGG
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCH
Confidence 4899999999999999999875 78877 5788763 2334556763 458999997 899999999943
No 195
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.04 E-value=0.00072 Score=69.74 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=65.2
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHHHHcC----------CeecCHHHHhccCCEEEEccC
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKARAVG----------VELVSFDQALATADFISLHMP 292 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g----------~~~~~l~ell~~aDvV~l~~P 292 (656)
.++.||++.|+|.|.||+++|+.|...| +|.++|+.... +.+.+.+ +...++.+.+.++|+|+.++|
T Consensus 124 ~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 124 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATP 202 (287)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSC
T ss_pred CCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCC
Confidence 4678999999999999999999999999 99999987421 1111111 122244566788999999999
Q ss_pred CCcccc---ccccHHHHhcCCCCcEEEEcCCC
Q 006212 293 LNPTTS---KIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 293 lt~~T~---~li~~~~l~~mK~gailINvaRg 321 (656)
...... ..+. ....++++.+++|+.-.
T Consensus 203 ~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 203 IGMYPNIDVEPIV--KAEKLREDMVVMDLIYN 232 (287)
T ss_dssp TTCTTCCSSCCSS--CSTTCCSSSEEEECCCS
T ss_pred CCCCCCCCCCCCC--CHHHcCCCCEEEEeeeC
Confidence 653210 0120 13457889999999754
No 196
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.03 E-value=0.00082 Score=69.55 Aligned_cols=93 Identities=18% Similarity=0.188 Sum_probs=64.1
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCCh--hHHHHc-----CC--eec---CHHHHhccCCEEEEcc
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAV-----GV--ELV---SFDQALATADFISLHM 291 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~--~~a~~~-----g~--~~~---~l~ell~~aDvV~l~~ 291 (656)
..+.||++.|+|.|.+|+.++..|...|. +|.++++.... +.+.+. ++ ... ++++.++++|+|+.++
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 46789999999999999999999999998 79999987522 122221 11 122 6778889999999999
Q ss_pred CCCcccc--ccccHHHHhcCCCCcEEEEcCC
Q 006212 292 PLNPTTS--KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 292 Plt~~T~--~li~~~~l~~mK~gailINvaR 320 (656)
|..-... -.+. ...++++.+++|+.-
T Consensus 203 p~Gm~~~~~~pi~---~~~l~~~~~v~DlvY 230 (283)
T 3jyo_A 203 PMGMPAHPGTAFD---VSCLTKDHWVGDVVY 230 (283)
T ss_dssp STTSTTSCSCSSC---GGGCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCC---HHHhCCCCEEEEecC
Confidence 9542111 1122 233566777777653
No 197
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.03 E-value=0.0014 Score=68.95 Aligned_cols=96 Identities=11% Similarity=0.222 Sum_probs=65.0
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCC-hhHHHH--------cCC--eec---C---HHHHhccCC
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP-ADKARA--------VGV--ELV---S---FDQALATAD 285 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~-~~~a~~--------~g~--~~~---~---l~ell~~aD 285 (656)
+.++.||++.|+|.|.+|++++..|...|. +|.++++... .+.+.+ .+. ... + +.+.+.++|
T Consensus 149 ~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aD 228 (315)
T 3tnl_A 149 GHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESV 228 (315)
T ss_dssp TCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCS
T ss_pred CCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCC
Confidence 457899999999999999999999999998 8999998732 222221 122 222 2 456678999
Q ss_pred EEEEccCCCcc--c-cccccHHHHhcCCCCcEEEEcCCC
Q 006212 286 FISLHMPLNPT--T-SKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 286 vV~l~~Plt~~--T-~~li~~~~l~~mK~gailINvaRg 321 (656)
+|+.++|..-. . ...+. ....++++.+++|+.-.
T Consensus 229 iIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~ 265 (315)
T 3tnl_A 229 IFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYK 265 (315)
T ss_dssp EEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCS
T ss_pred EEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccC
Confidence 99999995421 1 11121 12336777788887643
No 198
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.02 E-value=0.0027 Score=66.23 Aligned_cols=88 Identities=20% Similarity=0.274 Sum_probs=58.4
Q ss_pred CEEEEEecChhHHHHHHHHhc--CCCEEEEECCCCChhHHH----Hc-------C--Cee-cCHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKG--LGMNVIAHDPYAPADKAR----AV-------G--VEL-VSFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~--~G~~Vi~~d~~~~~~~a~----~~-------g--~~~-~~l~ell~~aDvV~l~~Pl 293 (656)
.+|+|||.|.+|..+|..+.. +|.+|..+|+........ .. . +.. .++++ +++||+|++++|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~- 78 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG- 78 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC-
Confidence 379999999999999999885 589999999876322111 11 1 122 35666 899999999998
Q ss_pred Cccccccc-------cH-------HHHhcCCCCcEEEEcC
Q 006212 294 NPTTSKIF-------ND-------ETFAKMKKGVRIVNVA 319 (656)
Q Consensus 294 t~~T~~li-------~~-------~~l~~mK~gailINva 319 (656)
++...+.. |. +.+....|++++++++
T Consensus 79 ~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 79 LPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 34333221 11 1122235788888884
No 199
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.02 E-value=0.0017 Score=67.57 Aligned_cols=102 Identities=18% Similarity=0.178 Sum_probs=65.7
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEE-EECCCCC-h-hHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccH
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAP-A-DKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi-~~d~~~~-~-~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
.+|||||+|.||+. +++.++.. ++++. ++|+... . ..+...|+.. .+++++..++|+|++|+|... . -+
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~--h---~~ 80 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTAS--H---FD 80 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTH--H---HH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchh--H---HH
Confidence 47999999999997 88888764 78876 7898763 2 2344557653 378777678999999999332 1 12
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHHhHhcC
Q 006212 304 ETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSG 336 (656)
Q Consensus 304 ~~l~~mK~ga-ilINv-aRg~ivde~aL~~aL~~g 336 (656)
.....++.|. +++.- .-..+-+.+.|.++.++.
T Consensus 81 ~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~ 115 (319)
T 1tlt_A 81 VVSTLLNAGVHVCVDKPLAENLRDAERLVELAARK 115 (319)
T ss_dssp HHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 2223355564 55542 222334455677666553
No 200
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.97 E-value=0.0017 Score=67.81 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=62.8
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCCh--hHHHHcCC-e-ecCHHHHh-ccCCEEEEccCCCccccccccH
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA--DKARAVGV-E-LVSFDQAL-ATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~--~~a~~~g~-~-~~~l~ell-~~aDvV~l~~Plt~~T~~li~~ 303 (656)
+|||||+|.||+.+++.++.. ++++. ++|+.... ..+...|. . +.++++++ .++|+|++|+|.. ... +
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~--~h~---~ 77 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNS--LHF---A 77 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGG--GHH---H
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChH--HHH---H
Confidence 799999999999999999876 67765 67876522 22344454 3 34899999 7899999999932 221 1
Q ss_pred HHHhcCCCCc-EEEEc-CCCchhcHHHHHHhHhc
Q 006212 304 ETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDS 335 (656)
Q Consensus 304 ~~l~~mK~ga-ilINv-aRg~ivde~aL~~aL~~ 335 (656)
-....++.|. +++.- .--.+-+.++|.++.++
T Consensus 78 ~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~ 111 (325)
T 2ho3_A 78 QAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEK 111 (325)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEecCCcCCHHHHHHHHHHHHH
Confidence 1222244454 45442 11223344556665554
No 201
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.97 E-value=0.0008 Score=71.18 Aligned_cols=63 Identities=21% Similarity=0.284 Sum_probs=50.7
Q ss_pred CEEEEEecChhHHHHHHHHhcC--CCEEE-EECCCCC--hhHHHHcCCee-cCHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL--GMNVI-AHDPYAP--ADKARAVGVEL-VSFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~--G~~Vi-~~d~~~~--~~~a~~~g~~~-~~l~ell~--~aDvV~l~~P 292 (656)
.+|||||+|.||+..++.++.. ++++. ++|++.. ...+.+.|+.. .+++++++ ++|+|++|+|
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 84 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTP 84 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSC
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCC
Confidence 4799999999999999999876 78876 6788752 22345567754 48999997 7999999999
No 202
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.95 E-value=0.018 Score=60.24 Aligned_cols=125 Identities=19% Similarity=0.185 Sum_probs=85.5
Q ss_pred hcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHHhcC
Q 006212 174 EFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAKGL 251 (656)
Q Consensus 174 ~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~lk~~ 251 (656)
-.+|+|.|+-+....++ .+++=++.+.++ .| .+.|.+|++||=| ++..+++..+..+
T Consensus 114 ~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~ 172 (307)
T 2i6u_A 114 VATVPVINALSDEFHPC--QVLADLQTIAER------------------KG-ALRGLRLSYFGDGANNMAHSLLLGGVTA 172 (307)
T ss_dssp HCSSCEEESCCSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCTTSHHHHHHHHHHHHT
T ss_pred hCCCCEEcCCCCCcCcc--HHHHHHHHHHHH------------------hC-CcCCeEEEEECCCCcCcHHHHHHHHHHC
Confidence 34688999766544443 233333333321 12 4789999999996 9999999999999
Q ss_pred CCEEEEECCCC--Chh-H---H----HHcCC--e-ecCHHHHhccCCEEEEccCC-------Ccc-----ccccccHHHH
Q 006212 252 GMNVIAHDPYA--PAD-K---A----RAVGV--E-LVSFDQALATADFISLHMPL-------NPT-----TSKIFNDETF 306 (656)
Q Consensus 252 G~~Vi~~d~~~--~~~-~---a----~~~g~--~-~~~l~ell~~aDvV~l~~Pl-------t~~-----T~~li~~~~l 306 (656)
|++|....|.. +.. . + ++.|. . ..++++.+++||+|..-.=. .++ ...-++.+.+
T Consensus 173 g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l 252 (307)
T 2i6u_A 173 GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLL 252 (307)
T ss_dssp TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHH
T ss_pred CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHH
Confidence 99999988753 221 1 2 25564 3 34899999999999983320 011 1245688888
Q ss_pred hcCCCCcEEEEcC
Q 006212 307 AKMKKGVRIVNVA 319 (656)
Q Consensus 307 ~~mK~gailINva 319 (656)
+.+||+++|.-|.
T Consensus 253 ~~a~~~ai~mH~l 265 (307)
T 2i6u_A 253 ALADSDAIVLHCL 265 (307)
T ss_dssp HHSCTTCEEEECS
T ss_pred hhcCCCcEEECCC
Confidence 8899999999986
No 203
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.95 E-value=0.0011 Score=61.47 Aligned_cols=90 Identities=12% Similarity=0.105 Sum_probs=57.2
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh--hHH---HHcCCeec-----C---HHHH-hccCCEEEEccCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA--DKA---RAVGVELV-----S---FDQA-LATADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~--~~a---~~~g~~~~-----~---l~el-l~~aDvV~l~~Pl 293 (656)
..+++.|+|+|.+|+.+++.|...|.+|.+.|+.... +.. ...|+..+ + ++++ +.++|+|+++++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 3567999999999999999999999999999986311 111 12344332 2 4444 7899999999984
Q ss_pred CccccccccHHHHhcCCCCcEEEEcC
Q 006212 294 NPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 294 t~~T~~li~~~~l~~mK~gailINva 319 (656)
... .+.-......+.+...++...
T Consensus 82 d~~--n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 82 DAD--NAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp HHH--HHHHHHHHHHHTSSSCEEEEC
T ss_pred hHH--HHHHHHHHHHHCCCCEEEEEE
Confidence 432 222233344453444444433
No 204
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.94 E-value=0.0014 Score=68.30 Aligned_cols=102 Identities=12% Similarity=0.169 Sum_probs=63.0
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEEEECCCCCh--hHHHHcCCe--ecCHHHHh-ccCCEEEEccCCCcccccccc
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVIAHDPYAPA--DKARAVGVE--LVSFDQAL-ATADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi~~d~~~~~--~~a~~~g~~--~~~l~ell-~~aDvV~l~~Plt~~T~~li~ 302 (656)
.+|||||+|.||+. +++.++.. ++++.++|+.... ..+.+.|+. +.+..+++ .++|+|++|+|.. ...
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~--~h~--- 77 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD--VHS--- 77 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG--GHH---
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCch--hHH---
Confidence 37999999999994 99988765 7888899987522 234556765 44555666 7899999999932 211
Q ss_pred HHHHhcCCCCc-EEEEc-CCCchhcHHHHHHhHhcC
Q 006212 303 DETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSG 336 (656)
Q Consensus 303 ~~~l~~mK~ga-ilINv-aRg~ivde~aL~~aL~~g 336 (656)
+.....++.|. +++.- .--.+-+.+.|.++.++.
T Consensus 78 ~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~ 113 (323)
T 1xea_A 78 TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKH 113 (323)
T ss_dssp HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhc
Confidence 11222344553 55542 112233445566655543
No 205
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.94 E-value=0.0015 Score=68.21 Aligned_cols=63 Identities=14% Similarity=0.204 Sum_probs=48.4
Q ss_pred EEEEEecChhHHHH-HHHHhcCCCEEE-EECCCCCh--hHHHHcCCe--ecCHHHHhc--cCCEEEEccCC
Q 006212 231 TLAVMGFGKVGSEV-ARRAKGLGMNVI-AHDPYAPA--DKARAVGVE--LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 231 tvGIIGlG~IG~~v-A~~lk~~G~~Vi-~~d~~~~~--~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 293 (656)
+|||||+|.||+.+ ++.++..+++++ ++|++... ..+.+.|+. +.+++++++ ++|+|++++|.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~ 72 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTN 72 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 79999999999998 777766778876 57887522 234455763 348999987 59999999993
No 206
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.93 E-value=0.00071 Score=64.59 Aligned_cols=73 Identities=15% Similarity=0.202 Sum_probs=60.4
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC--CCHHHHHHHhcCCCccEEEEEe
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE--PNQDSLKEIGKVPAIEEYTLLH 631 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~--~~~e~l~~L~~~~~V~~v~~v~ 631 (656)
|.|-+...|+||++++|+.++.++|+||..+.+......+.+-+.+.++.. .-+.+.++|.++.+|.+|..+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~Kl~dV~~V~~~~ 79 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNKLIEVVKLIDLS 79 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHHSTTEEEEEEGG
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcCCCCEEEEEEcC
Confidence 678888899999999999999999999999999876656677776666533 3347888999999999887664
No 207
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.91 E-value=0.0011 Score=68.57 Aligned_cols=64 Identities=14% Similarity=0.219 Sum_probs=50.8
Q ss_pred CCEEEEEecChhHHH-HHHHHhcC-CCEEE-EECCCCC--hhHHHHcCCe-ecCHHHHhccCCEEEEccC
Q 006212 229 GKTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAP--ADKARAVGVE-LVSFDQALATADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGlG~IG~~-vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~~-~~~l~ell~~aDvV~l~~P 292 (656)
-.++||||+|.||+. +++.++.. ++++. ++|+... ...+.+.|+. +.++++++.++|+|++|+|
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp 75 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSS 75 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCC
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCC
Confidence 368999999999997 88888864 78887 5898752 2234456765 4589999999999999999
No 208
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.91 E-value=0.0074 Score=62.87 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=71.0
Q ss_pred ccCCCEEEEEec---ChhHHHHHHHHhcC-CCEEEEECCCC---ChhHHHHcCCee---cCHHHHhccCCEEEEccCCCc
Q 006212 226 SLVGKTLAVMGF---GKVGSEVARRAKGL-GMNVIAHDPYA---PADKARAVGVEL---VSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 226 ~l~gktvGIIGl---G~IG~~vA~~lk~~-G~~Vi~~d~~~---~~~~a~~~g~~~---~~l~ell~~aDvV~l~~Plt~ 295 (656)
.+.|++|++||= |++..+++..+..+ |++|....|.. +...+.+.|..+ .++++.+++||+|..-.=-.+
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q~e 225 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKE 225 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCST
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCCcccc
Confidence 478999999998 59999999999999 99999998853 223234556542 489999999999987654221
Q ss_pred cc-----------cccccHHHHhcCCCCcEEEEcC
Q 006212 296 TT-----------SKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 296 ~T-----------~~li~~~~l~~mK~gailINva 319 (656)
.. ..-++.+.++.+||++++.-|.
T Consensus 226 r~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~l 260 (299)
T 1pg5_A 226 RFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPL 260 (299)
T ss_dssp TSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCS
T ss_pred cccCHHHHHHhhcCcccCHHHHHhcCCCCEEECCC
Confidence 10 2446778888888888888886
No 209
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.86 E-value=0.014 Score=60.82 Aligned_cols=94 Identities=15% Similarity=0.097 Sum_probs=70.8
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--C-hhHHHHcCCee-cCHHHHhccCCEEEEccCCC------
Q 006212 226 SLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--P-ADKARAVGVEL-VSFDQALATADFISLHMPLN------ 294 (656)
Q Consensus 226 ~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~-~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt------ 294 (656)
.+.|.+|+++|= +++..+++..+..+|++|....|.. + .+.....++.. .++++.+++||+|..-.=..
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 478999999997 8999999999999999999998853 2 22222223553 48999999999998833200
Q ss_pred cc------ccccccHHHHhcCCCCcEEEEcC
Q 006212 295 PT------TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 295 ~~------T~~li~~~~l~~mK~gailINva 319 (656)
.. ...-++.+.++.+||++++.-|.
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHpl 261 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCL 261 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECS
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCC
Confidence 11 12456888899899999999997
No 210
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.86 E-value=0.0017 Score=68.72 Aligned_cols=66 Identities=12% Similarity=0.081 Sum_probs=51.0
Q ss_pred CCCEEEEEecChhHH-HHHHHHhcC-CCEEE-EECCCCC--hhHHHHcCCee-cCHHHHhc--cCCEEEEccCC
Q 006212 228 VGKTLAVMGFGKVGS-EVARRAKGL-GMNVI-AHDPYAP--ADKARAVGVEL-VSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGlG~IG~-~vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~~~-~~l~ell~--~aDvV~l~~Pl 293 (656)
.-.+|||||+|.||+ .+++.++.. +++|. ++|+... ...+.+.|+.. .+++++++ +.|+|++|+|.
T Consensus 26 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 99 (350)
T 3rc1_A 26 NPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPA 99 (350)
T ss_dssp CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCG
T ss_pred CceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCc
Confidence 345899999999998 789988876 78876 5787642 23345567754 48999997 58999999993
No 211
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.84 E-value=0.0012 Score=69.39 Aligned_cols=64 Identities=17% Similarity=0.259 Sum_probs=50.7
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+..++.++.. ++++. ++|+... ...+...|+. +.+++++++ ++|+|++|+|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCC
Confidence 3799999999999999999875 78877 4788752 2334556763 458999998 89999999993
No 212
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.84 E-value=0.0012 Score=70.14 Aligned_cols=64 Identities=25% Similarity=0.401 Sum_probs=51.0
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEEE-ECCCCC-hhHHHHcCCee-cCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAP-ADKARAVGVEL-VSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi~-~d~~~~-~~~a~~~g~~~-~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+..++.++.. +++|.+ +|+... .+.+...|+.. .++++++. +.|+|++|+|.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~ 75 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPN 75 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCc
Confidence 4799999999999999999876 788875 688752 23445567754 48999997 79999999993
No 213
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.84 E-value=0.00017 Score=74.65 Aligned_cols=91 Identities=14% Similarity=0.099 Sum_probs=62.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCC---ee-cCHHHHh-ccCCEEEEccCCCccccccccH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGV---EL-VSFDQAL-ATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~---~~-~~l~ell-~~aDvV~l~~Plt~~T~~li~~ 303 (656)
++|+|||.|.||..+|..|...|.+|.++++... .+.....|. .. .+..+.+ ..+|+|++++|.. .+...+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~-~~~~~l~- 80 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTH-QLDAVIP- 80 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGG-GHHHHGG-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCcc-CHHHHHH-
Confidence 5799999999999999999988889999988742 111112232 11 1334444 8899999999943 4444442
Q ss_pred HHHhcCCCCcEEEEcCCCc
Q 006212 304 ETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~ 322 (656)
..-..++++++||.+.-|=
T Consensus 81 ~l~~~l~~~~~iv~~~nGi 99 (294)
T 3g17_A 81 HLTYLAHEDTLIILAQNGY 99 (294)
T ss_dssp GHHHHEEEEEEEEECCSSC
T ss_pred HHHHhhCCCCEEEEeccCc
Confidence 2233467888999988763
No 214
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=96.83 E-value=0.0018 Score=54.65 Aligned_cols=63 Identities=19% Similarity=0.159 Sum_probs=48.7
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEe--CCCCC-HHHHHHHhcCCC
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGV--DEEPN-QDSLKEIGKVPA 623 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~--D~~~~-~e~l~~L~~~~~ 623 (656)
..|.+..+|+||+++.|+++|+++|+||.+++..+.. +...+.+.+ ++... +++.++|+++..
T Consensus 6 ~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~--~~~~~~i~v~~~~~~~l~~l~~~L~~~~~ 71 (91)
T 1zpv_A 6 AIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLD--EYFTMMAVVSSDEKQDFTYLRNEFEAFGQ 71 (91)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEET--TEEEEEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEc--CEEEEEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4567789999999999999999999999999998765 566666555 43223 477788877643
No 215
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.82 E-value=0.0021 Score=67.25 Aligned_cols=64 Identities=14% Similarity=0.078 Sum_probs=48.3
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 293 (656)
.++||||+|.||+.+++.++.. ++++. ++|++.. ...+.+.|+. +.++++++. +.|+|++|+|.
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 4799999999999999998855 56766 4687752 2334555663 458999998 89999999993
No 216
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.81 E-value=0.0026 Score=66.72 Aligned_cols=64 Identities=20% Similarity=0.368 Sum_probs=49.1
Q ss_pred CEEEEEecChhHHHHHHHHh-cC-CCEEE-EECCCCCh--hHHHHcCC-e-ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAK-GL-GMNVI-AHDPYAPA--DKARAVGV-E-LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk-~~-G~~Vi-~~d~~~~~--~~a~~~g~-~-~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+..++.++ .. +++++ ++|+.... ..+...|+ . +.++++++. ++|+|++|+|.
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~ 81 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPT 81 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCG
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 47999999999999999988 54 78865 57887522 22344576 3 348999987 69999999993
No 217
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.75 E-value=0.0022 Score=59.50 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=68.4
Q ss_pred CCEEEEEec----ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccH
Q 006212 229 GKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 229 gktvGIIGl----G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~ 303 (656)
-++|+|||. |++|..+++.++..|++|+..+|... + -.|+... +++++....|++++++|. +....++.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~-~---i~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv~- 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE-E---VLGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYVE- 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS-E---ETTEECBSSGGGCSSCCSEEEECSCH-HHHHHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC-e---ECCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHHH-
Confidence 579999999 79999999999999999888887641 1 1466554 799988899999999994 44445553
Q ss_pred HHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 304 ETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
+..+ .....+++..+ . .++++.+..++..+
T Consensus 96 ~~~~-~gi~~i~~~~g--~--~~~~l~~~a~~~Gi 125 (144)
T 2d59_A 96 QAIK-KGAKVVWFQYN--T--YNREASKKADEAGL 125 (144)
T ss_dssp HHHH-HTCSEEEECTT--C--CCHHHHHHHHHTTC
T ss_pred HHHH-cCCCEEEECCC--c--hHHHHHHHHHHcCC
Confidence 3333 33345655533 2 25566666665433
No 218
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.72 E-value=0.021 Score=60.04 Aligned_cols=125 Identities=20% Similarity=0.243 Sum_probs=84.8
Q ss_pred hcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHHhcC
Q 006212 174 EFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAKGL 251 (656)
Q Consensus 174 ~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~lk~~ 251 (656)
-.+|+|.|+-+....++ .+++=++.+.++ .| .+.|++|+++|=| ++..+++..+..+
T Consensus 133 ~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~~~ 191 (325)
T 1vlv_A 133 YSGVPVYNGLTDEFHPT--QALADLMTIEEN------------------FG-RLKGVKVVFMGDTRNNVATSLMIACAKM 191 (325)
T ss_dssp HHCSCEEESCCSSCCHH--HHHHHHHHHHHH------------------HS-CSTTCEEEEESCTTSHHHHHHHHHHHHT
T ss_pred hCCCCEEeCCCCCCCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCCCcCcHHHHHHHHHHC
Confidence 34688999766544443 233333333321 12 4789999999996 9999999999999
Q ss_pred CCEEEEECCCC---ChhH---H----HHcCCe---ecCHHHHhccCCEEEEccCC-------Ccc-----ccccccHHHH
Q 006212 252 GMNVIAHDPYA---PADK---A----RAVGVE---LVSFDQALATADFISLHMPL-------NPT-----TSKIFNDETF 306 (656)
Q Consensus 252 G~~Vi~~d~~~---~~~~---a----~~~g~~---~~~l~ell~~aDvV~l~~Pl-------t~~-----T~~li~~~~l 306 (656)
|++|....|.. +.+. + ++.|.. ..++++.+++||+|..-.=. .++ ...-++.+.+
T Consensus 192 G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell 271 (325)
T 1vlv_A 192 GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVM 271 (325)
T ss_dssp TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECCCC----------CHHHHGGGCBCHHHH
T ss_pred CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEeccccccccccchHhHHHHHhhcCCCHHHH
Confidence 99999988753 2211 2 255643 24899999999999883321 011 1245688888
Q ss_pred hcC-CCCcEEEEcC
Q 006212 307 AKM-KKGVRIVNVA 319 (656)
Q Consensus 307 ~~m-K~gailINva 319 (656)
+.+ ||+++|.-|.
T Consensus 272 ~~a~k~dai~mH~L 285 (325)
T 1vlv_A 272 EMTGKSETIFMHCL 285 (325)
T ss_dssp HTTCCTTCEEEECS
T ss_pred HhccCCCeEEECCC
Confidence 888 9999999986
No 219
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.71 E-value=0.0028 Score=68.29 Aligned_cols=96 Identities=22% Similarity=0.235 Sum_probs=74.8
Q ss_pred ccccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC--Ch-----------hHHHHcCC--eecCHHHHhccCC
Q 006212 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA--PA-----------DKARAVGV--ELVSFDQALATAD 285 (656)
Q Consensus 222 ~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~--~~-----------~~a~~~g~--~~~~l~ell~~aD 285 (656)
..|..+...+|.|+|.|..|..+|+.+.++|. +|+.+|... .. ..+..... ...+|.+.++.+|
T Consensus 181 l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~AD 260 (398)
T 2a9f_A 181 LLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGAD 260 (398)
T ss_dssp TTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTC
T ss_pred HhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCC
Confidence 35678899999999999999999999999999 999998752 10 11111110 1236999999999
Q ss_pred EEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 286 FISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 286 vV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
+++=+- +-+++.++.++.|+++++|+.++.-.
T Consensus 261 V~IG~S-----apgl~T~EmVk~Ma~~pIIfalsNPt 292 (398)
T 2a9f_A 261 IFIGVS-----APGVLKAEWISKMAARPVIFAMANPI 292 (398)
T ss_dssp SEEECC-----STTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred EEEecC-----CCCCCCHHHHHhhCCCCEEEECCCCC
Confidence 987652 35889999999999999999999743
No 220
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.71 E-value=0.0018 Score=59.87 Aligned_cols=100 Identities=21% Similarity=0.308 Sum_probs=68.4
Q ss_pred CCCEEEEEec----ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCcccccccc
Q 006212 228 VGKTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFN 302 (656)
Q Consensus 228 ~gktvGIIGl----G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~ 302 (656)
+-++|+|||. |++|..+++.++..|++|+..+|....+. -.|+... +++++-...|++++++|. +....++.
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~--i~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~~ 88 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE--LFGEEAVASLLDLKEPVDILDVFRPP-SALMDHLP 88 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE--ETTEECBSSGGGCCSCCSEEEECSCH-HHHTTTHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCc--CCCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHHH
Confidence 3568999999 89999999999999999888887621111 1366554 799988899999999994 55555653
Q ss_pred HHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcC
Q 006212 303 DETFAKMKKGVRIVNVARGGVIDEEALVRALDSG 336 (656)
Q Consensus 303 ~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g 336 (656)
+..+ .....++++.+-. ++++.+..++.
T Consensus 89 -~~~~-~gi~~i~~~~g~~----~~~~~~~a~~~ 116 (140)
T 1iuk_A 89 -EVLA-LRPGLVWLQSGIR----HPEFEKALKEA 116 (140)
T ss_dssp -HHHH-HCCSCEEECTTCC----CHHHHHHHHHT
T ss_pred -HHHH-cCCCEEEEcCCcC----HHHHHHHHHHc
Confidence 3333 3334566654322 45555555554
No 221
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.69 E-value=0.029 Score=58.79 Aligned_cols=94 Identities=18% Similarity=0.206 Sum_probs=70.7
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--Chh-H---H----HHcCCe---ecCHHHHhccCCEEEEcc
Q 006212 226 SLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--PAD-K---A----RAVGVE---LVSFDQALATADFISLHM 291 (656)
Q Consensus 226 ~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~~~-~---a----~~~g~~---~~~l~ell~~aDvV~l~~ 291 (656)
.+.|.+|++||= +++..+++..+..+|++|....|.. +.. . + ++.|.. ..++++.+++||+|..-.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 478999999997 8999999999999999999988753 221 1 2 255643 348999999999998843
Q ss_pred CC-------Ccc-----ccccccHHHHhcCCCCcEEEEcC
Q 006212 292 PL-------NPT-----TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Pl-------t~~-----T~~li~~~~l~~mK~gailINva 319 (656)
=. .++ ...-++.+.++.+||++++.-|.
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~l 271 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCL 271 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECS
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCC
Confidence 21 011 12456888888899999999986
No 222
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.66 E-value=0.0057 Score=64.55 Aligned_cols=67 Identities=22% Similarity=0.293 Sum_probs=50.0
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHH--HH-------cC----Cee-cCHHHHhccCCEEEEcc--
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--RA-------VG----VEL-VSFDQALATADFISLHM-- 291 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a--~~-------~g----~~~-~~l~ell~~aDvV~l~~-- 291 (656)
.++|+|||.|.+|..+|..|...|+ +|..||........ .. .+ +.. .++++.+++||+|++++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g~ 88 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAGL 88 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccCC
Confidence 3589999999999999999987787 99999987532111 10 11 222 47888899999999999
Q ss_pred CCCc
Q 006212 292 PLNP 295 (656)
Q Consensus 292 Plt~ 295 (656)
|..+
T Consensus 89 p~~~ 92 (331)
T 1pzg_A 89 TKVP 92 (331)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 6443
No 223
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.66 E-value=0.0038 Score=65.36 Aligned_cols=64 Identities=11% Similarity=0.133 Sum_probs=49.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCC---CEEEE-ECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG---MNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G---~~Vi~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~Pl 293 (656)
.++||||+|.||+..++.++..+ +++.+ +|++.. ...+.+.|+. +.++++++. +.|+|++|+|.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCc
Confidence 37999999999999999998653 56654 787752 2344556763 458999997 69999999993
No 224
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.65 E-value=0.0046 Score=68.01 Aligned_cols=102 Identities=20% Similarity=0.286 Sum_probs=73.1
Q ss_pred cccccCCCEEEEEecC----------hhHHHHHHHHhcCCCEEEEECCCCChhHHHHc-CCeec-CHHHHhccCCEEEEc
Q 006212 223 VGVSLVGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKARAV-GVELV-SFDQALATADFISLH 290 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG----------~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~-g~~~~-~l~ell~~aDvV~l~ 290 (656)
.+..+.|++|+|+|+- .-...+++.|...|.+|.+|||+...+..... ++.++ ++++.++.||.|+++
T Consensus 316 l~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~ad~vvi~ 395 (446)
T 4a7p_A 316 MGGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAALQDAGATVKAYDPEGVEQASKMLTDVEFVENPYAAADGADALVIV 395 (446)
T ss_dssp TTSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHHHHTSCEEEEECSSCHHHHGGGCSSCCBCSCHHHHHTTBSEEEEC
T ss_pred hcccCCCCEEEEEEEEeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCCHhHHHhcCCceEecChhHHhcCCCEEEEe
Confidence 3567899999999997 56788999999999999999999743222222 55554 789999999999999
Q ss_pred cCCCccccccccHHHHh-cCCCCcEEEEcCCCchhcHHHH
Q 006212 291 MPLNPTTSKIFNDETFA-KMKKGVRIVNVARGGVIDEEAL 329 (656)
Q Consensus 291 ~Plt~~T~~li~~~~l~-~mK~gailINvaRg~ivde~aL 329 (656)
++-. +-+. ++-+.+. .|+ +.+|+|+ |+ +.+.+.+
T Consensus 396 t~~~-~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 396 TEWD-AFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp SCCT-TTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred eCCH-Hhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 8733 3332 3544444 465 4678995 44 4465554
No 225
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.61 E-value=0.0017 Score=67.57 Aligned_cols=90 Identities=18% Similarity=0.188 Sum_probs=56.2
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCCh-h-HHHHcC--------Cee--cCHHHHhccCCEEEEccCCCc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPA-D-KARAVG--------VEL--VSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~-~-~a~~~g--------~~~--~~l~ell~~aDvV~l~~Plt~ 295 (656)
++|+|||.|.+|..+|..+...|+ +|..+|..... + .+.+.. ... .+ .+.+++||+|+++++...
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~-~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGG-HSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEEC-GGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECC-HHHhCCCCEEEEcCCCCC
Confidence 479999999999999999998888 99999986421 1 122211 111 23 356899999999996322
Q ss_pred ccccc-----c--c----H---HHHhcCCCCcEEEEcCCC
Q 006212 296 TTSKI-----F--N----D---ETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 296 ~T~~l-----i--~----~---~~l~~mK~gailINvaRg 321 (656)
..++ + | . ..+....|++++++++-.
T Consensus 80 -~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP 118 (304)
T 2v6b_A 80 -KPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNP 118 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSS
T ss_pred -CCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCc
Confidence 1111 0 0 1 223334688899887543
No 226
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.57 E-value=0.0043 Score=62.03 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=64.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhH---HHHcCCeec--C-HHHHhccCCEEEEccCCCccc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADK---ARAVGVELV--S-FDQALATADFISLHMPLNPTT 297 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~---a~~~g~~~~--~-l~ell~~aDvV~l~~Plt~~T 297 (656)
..++.|+++.|||.|.+|...++.|...|.+|.+++|....+. +.+.++.+. . -++.+..+|+|+.++. .++
T Consensus 26 fl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~-d~~- 103 (223)
T 3dfz_A 26 MLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATN-DQA- 103 (223)
T ss_dssp EECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCC-CTH-
T ss_pred EEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCC-CHH-
Confidence 4589999999999999999999999999999999999865332 222234433 1 2356788999987754 332
Q ss_pred cccccHHHHhcCCCCcEEEEcC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINva 319 (656)
+|.......+ -.++||++
T Consensus 104 ---~N~~I~~~ak-~gi~VNvv 121 (223)
T 3dfz_A 104 ---VNKFVKQHIK-NDQLVNMA 121 (223)
T ss_dssp ---HHHHHHHHSC-TTCEEEC-
T ss_pred ---HHHHHHHHHh-CCCEEEEe
Confidence 4555555566 55788985
No 227
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.57 E-value=0.0014 Score=68.81 Aligned_cols=66 Identities=20% Similarity=0.274 Sum_probs=46.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhHHHHcC-----------Cee-cCHHHHhccCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADKARAVG-----------VEL-VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~a~~~g-----------~~~-~~l~ell~~aDvV~l~~Plt 294 (656)
-++|+|||.|.||.++|..++..|. +|..||.......+...+ +.. .+..+.+++||+|++++|..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~ 85 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN 85 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCC
Confidence 3689999999999999999986554 899999874221111111 111 13456799999999998843
No 228
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.56 E-value=0.015 Score=60.57 Aligned_cols=92 Identities=24% Similarity=0.300 Sum_probs=67.1
Q ss_pred ccCCCEEEEEecC---hhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeecCHHHHhccCCEEEEccCCCcc-----
Q 006212 226 SLVGKTLAVMGFG---KVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELVSFDQALATADFISLHMPLNPT----- 296 (656)
Q Consensus 226 ~l~gktvGIIGlG---~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~----- 296 (656)
.+.|++|++||=| ++..+++..+..+|++|....|.. ..+. ...| ...++++.+++||+|..-.--.+.
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~-~~~g-~~~d~~eav~~aDvvyt~~~q~er~~~~~ 221 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDEE-NTFG-TYVSMDEAVESSDVVMLLRIQNERHQSAV 221 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-CSSC-EECCHHHHHHHCSEEEECCCCTTTCCSSC
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccCcch-hhcC-ccCCHHHHhCCCCEEEeccchhhccccch
Confidence 4789999999975 699999999999999999988753 1121 1223 345899999999999884311110
Q ss_pred ------ccccccHHHHhcCCCCcEEEEcC
Q 006212 297 ------TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 297 ------T~~li~~~~l~~mK~gailINva 319 (656)
...-++.+.++.+|++++|.-|.
T Consensus 222 ~~~~~~~~y~v~~~~l~~a~~~ai~mHcl 250 (304)
T 3r7f_A 222 SQEGYLNKYGLTVERAERMKRHAIIMHPA 250 (304)
T ss_dssp CSTTHHHHHSBCHHHHTTSCTTCEEECCS
T ss_pred hHHHHhCCCccCHHHHhhcCCCCEEECCC
Confidence 01336778888888888888885
No 229
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.56 E-value=0.0038 Score=57.51 Aligned_cols=58 Identities=16% Similarity=0.205 Sum_probs=46.0
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCCCCHHHHHHHhc
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEEPNQDSLKEIGK 620 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~~~~e~l~~L~~ 620 (656)
+.+.+..+|+||+++++.++|+++||||.+|...+ .++.+.+++.++ -.+.+.+.|.+
T Consensus 73 svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~--~~~~~~~~i~~~--d~~~A~~~L~~ 130 (144)
T 2f06_A 73 DVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA--NNNVANVVIRPS--NMDKCIEVLKE 130 (144)
T ss_dssp EEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEEEEEEEES--CHHHHHHHHHH
T ss_pred eEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc--cCCcEEEEEEeC--CHHHHHHHHHH
Confidence 34555789999999999999999999999988875 356788888886 23566777766
No 230
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.55 E-value=0.0029 Score=66.51 Aligned_cols=63 Identities=21% Similarity=0.261 Sum_probs=49.3
Q ss_pred CEEEEEecChhHHHHHHHHh-cC-CCEEE-EECCCCC--hhHHHHcC--Ce-ecCHHHHhcc--CCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAK-GL-GMNVI-AHDPYAP--ADKARAVG--VE-LVSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk-~~-G~~Vi-~~d~~~~--~~~a~~~g--~~-~~~l~ell~~--aDvV~l~~P 292 (656)
.+|||||+|.||+..++.++ .. ++++. ++|+... ...+.+.| .. +.++++++++ .|+|++|+|
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSW 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSC
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCC
Confidence 37999999999999999998 54 78877 5788752 23345567 33 3589999976 999999999
No 231
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.55 E-value=0.02 Score=60.53 Aligned_cols=127 Identities=17% Similarity=0.166 Sum_probs=86.2
Q ss_pred HhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHHhc
Q 006212 173 TEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAKG 250 (656)
Q Consensus 173 ~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~lk~ 250 (656)
.-.+|+|.|.-+....++ .+++=++.+.++ .|..+.|.+|++||=| ++..+++..+..
T Consensus 119 ~~s~vPVINa~~~~~HPt--Q~LaDl~Ti~e~------------------~g~~l~gl~va~vGD~~~~va~Sl~~~~~~ 178 (335)
T 1dxh_A 119 KFAGVPVFNGLTDEYHPT--QMLADVLTMREH------------------SDKPLHDISYAYLGDARNNMGNSLLLIGAK 178 (335)
T ss_dssp HHSSSCEEEEECSSCCHH--HHHHHHHHHHHT------------------CSSCGGGCEEEEESCCSSHHHHHHHHHHHH
T ss_pred HhCCCCEEcCCCCCCCcH--HHHHHHHHHHHH------------------cCCCcCCeEEEEecCCccchHHHHHHHHHH
Confidence 344688999765444343 233333333321 2325789999999996 999999999999
Q ss_pred CCCEEEEECCCC---ChhH---H----HHcCCe---ecCHHHHhccCCEEEEccCC--Ccc-----------ccccccHH
Q 006212 251 LGMNVIAHDPYA---PADK---A----RAVGVE---LVSFDQALATADFISLHMPL--NPT-----------TSKIFNDE 304 (656)
Q Consensus 251 ~G~~Vi~~d~~~---~~~~---a----~~~g~~---~~~l~ell~~aDvV~l~~Pl--t~~-----------T~~li~~~ 304 (656)
+|++|....|.. +.+. + ++.|.. ..++++.+++||+|..-.=. ..+ ...-++.+
T Consensus 179 ~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ 258 (335)
T 1dxh_A 179 LGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNME 258 (335)
T ss_dssp TTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHH
T ss_pred cCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHH
Confidence 999999988753 2211 2 255643 24899999999999883321 000 12456888
Q ss_pred HHhcC-CCCcEEEEcC
Q 006212 305 TFAKM-KKGVRIVNVA 319 (656)
Q Consensus 305 ~l~~m-K~gailINva 319 (656)
.++.+ ||+++|.-|.
T Consensus 259 ll~~a~~~~ai~mHcL 274 (335)
T 1dxh_A 259 IMKATGNPRAKFMHCL 274 (335)
T ss_dssp HHHTTCCSSCEEEECS
T ss_pred HHHhccCCCeEEECCC
Confidence 88889 9999999986
No 232
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.54 E-value=0.0013 Score=68.39 Aligned_cols=63 Identities=16% Similarity=0.267 Sum_probs=46.2
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCCh-hHHHHcCCe-ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA-DKARAVGVE-LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~-~~a~~~g~~-~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+.+++.++.. +++++ ++|+.... +.+.+. +. +.+++++++ ++|+|++|+|.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~ 79 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPP 79 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCG
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCCh
Confidence 4799999999999999999875 67765 67876421 111111 33 347899985 89999999993
No 233
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.51 E-value=0.0029 Score=67.71 Aligned_cols=65 Identities=23% Similarity=0.393 Sum_probs=46.3
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcC----CeecC---HHHHhccCCEEEE
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVG----VELVS---FDQALATADFISL 289 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g----~~~~~---l~ell~~aDvV~l 289 (656)
.-+.||||+|+|.|.+|+.+++.++.+|++|+++|++.......... ..+.+ +.++++++|+|+.
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 45789999999999999999999999999999999864211000000 01122 5567778888744
No 234
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.50 E-value=0.016 Score=61.27 Aligned_cols=127 Identities=18% Similarity=0.163 Sum_probs=86.1
Q ss_pred hcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHHhcC
Q 006212 174 EFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAKGL 251 (656)
Q Consensus 174 ~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~lk~~ 251 (656)
-.+|+|.|+-+....++ .+++=++.+.+++ .|..+.|.+|++||=| ++..+++..+..+
T Consensus 119 ~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~-----------------~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~ 179 (333)
T 1duv_G 119 YASVPVWNGLTNEFHPT--QLLADLLTMQEHL-----------------PGKAFNEMTLVYAGDARNNMGNSMLEAAALT 179 (333)
T ss_dssp HHSSCEEESCCSSCCHH--HHHHHHHHHHHHS-----------------TTCCGGGCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred hCCCCeEcCCCCCCCch--HHHHHHHHHHHHh-----------------cCCCCCCcEEEEECCCccchHHHHHHHHHHc
Confidence 34688999766444443 2333333333210 1325789999999986 9999999999999
Q ss_pred CCEEEEECCCC---ChhH-------HHHcCCe---ecCHHHHhccCCEEEEccCC--Ccc-----------ccccccHHH
Q 006212 252 GMNVIAHDPYA---PADK-------ARAVGVE---LVSFDQALATADFISLHMPL--NPT-----------TSKIFNDET 305 (656)
Q Consensus 252 G~~Vi~~d~~~---~~~~-------a~~~g~~---~~~l~ell~~aDvV~l~~Pl--t~~-----------T~~li~~~~ 305 (656)
|++|....|.. +.+. +++.|.. ..++++.+++||+|..-.=. ..+ ...-++.+.
T Consensus 180 G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~l 259 (333)
T 1duv_G 180 GLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKM 259 (333)
T ss_dssp CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHH
T ss_pred CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhhccccCHHH
Confidence 99999988753 2211 2256643 34899999999999883321 000 124568888
Q ss_pred HhcC-CCCcEEEEcC
Q 006212 306 FAKM-KKGVRIVNVA 319 (656)
Q Consensus 306 l~~m-K~gailINva 319 (656)
++.+ ||+++|.-|.
T Consensus 260 l~~a~~~~ai~mHcL 274 (333)
T 1duv_G 260 MQLTGNPEVKFLHCL 274 (333)
T ss_dssp HHTTCCTTCEEEECS
T ss_pred HHhccCCCcEEECCC
Confidence 8889 9999999986
No 235
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.50 E-value=0.0045 Score=60.31 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=60.0
Q ss_pred ccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeC--CCCCHHHHHHHhcCCCccEEEEEee
Q 006212 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD--EEPNQDSLKEIGKVPAIEEYTLLHV 632 (656)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D--~~~~~e~l~~L~~~~~V~~v~~v~l 632 (656)
.+.|-+...|+||++++|+.++.+.|+||..+.+......+..-+.|.++ +..-+.+.++|.++..|.+|..+.-
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~KLidVikV~dl~~ 105 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYKLVEVVKVTPIDP 105 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTTSTTEEEEEECCS
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcCcCceEEEEEecC
Confidence 47788888999999999999999999999999998766556666655554 4455588888888888888776543
No 236
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.49 E-value=0.0023 Score=69.70 Aligned_cols=90 Identities=20% Similarity=0.306 Sum_probs=63.5
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-----C---HHHH-hccCCEEEEccCCCcccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTS 298 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-----~---l~el-l~~aDvV~l~~Plt~~T~ 298 (656)
+.+|.|+|+|++|+.+|+.|+..|.+|++.|.+. ..+.+.+.|+..+ + |.++ +.+||+|++++|....+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n- 82 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN- 82 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH-
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH-
Confidence 4569999999999999999999999999999875 3345566676432 2 3333 68899999999854322
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaR 320 (656)
+.-......+.|...+|--++
T Consensus 83 -~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 83 -LQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp -HHHHHHHHHHCTTCEEEEEES
T ss_pred -HHHHHHHHHhCCCCeEEEEEC
Confidence 222344555677766655444
No 237
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.47 E-value=0.0042 Score=65.88 Aligned_cols=64 Identities=16% Similarity=0.312 Sum_probs=50.4
Q ss_pred CCEEEEEecChhHHHHHHHHh-cC-CCEEE-EECCCCCh--hHHHHcC--Ce-ecCHHHHhc--cCCEEEEccC
Q 006212 229 GKTLAVMGFGKVGSEVARRAK-GL-GMNVI-AHDPYAPA--DKARAVG--VE-LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk-~~-G~~Vi-~~d~~~~~--~~a~~~g--~~-~~~l~ell~--~aDvV~l~~P 292 (656)
-.+|||||+|.||+..++.++ .. ++++. ++|++... ..+.+.| .. +.++++++. +.|+|++|+|
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp 96 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITAS 96 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSC
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCC
Confidence 358999999999999999998 54 78877 58987643 3345567 43 458999987 5899999999
No 238
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=96.47 E-value=0.024 Score=60.53 Aligned_cols=93 Identities=19% Similarity=0.154 Sum_probs=69.5
Q ss_pred cCCCEEEEEecC--hhHHHHHHHHhcCCCEEEEECCCC--C---hh-------HHHHcCCe--e-cCHHHHhccCCEEEE
Q 006212 227 LVGKTLAVMGFG--KVGSEVARRAKGLGMNVIAHDPYA--P---AD-------KARAVGVE--L-VSFDQALATADFISL 289 (656)
Q Consensus 227 l~gktvGIIGlG--~IG~~vA~~lk~~G~~Vi~~d~~~--~---~~-------~a~~~g~~--~-~~l~ell~~aDvV~l 289 (656)
+.|++|++||=| ++..+++..+..+|++|....|.. + .+ .+.+.|.. . .++++.+++||+|..
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVyt 257 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIYT 257 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEEE
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEEe
Confidence 789999999988 789999999999999999988753 2 11 12345643 3 389999999999987
Q ss_pred cc--CCCcc-----------ccccccHHHHhcCCCCcEEEEcC
Q 006212 290 HM--PLNPT-----------TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 290 ~~--Plt~~-----------T~~li~~~~l~~mK~gailINva 319 (656)
-+ ...++ ...-++.+.++.+|++++|.-|.
T Consensus 258 d~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHcL 300 (365)
T 4amu_A 258 DVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHCL 300 (365)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEECS
T ss_pred cccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 32 11111 12447888888899999999886
No 239
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.45 E-value=0.029 Score=58.94 Aligned_cols=126 Identities=16% Similarity=0.097 Sum_probs=82.6
Q ss_pred HhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC-hhHHHHHHHHhcC
Q 006212 173 TEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG-KVGSEVARRAKGL 251 (656)
Q Consensus 173 ~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG-~IG~~vA~~lk~~ 251 (656)
...+|+|+|+-+....++ .+++=++.+.++ .| .+.|.+|++||=| ++..+++..+..+
T Consensus 120 ~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g-~l~gl~va~vGD~~~va~Sl~~~~~~~ 178 (321)
T 1oth_A 120 KEASIPIINGLSDLYHPI--QILADYLTLQEH------------------YS-SLKGLTLSWIGDGNNILHSIMMSAAKF 178 (321)
T ss_dssp HHCSSCEEESCCSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCSSHHHHHHHTTTGGG
T ss_pred HhCCCCEEcCCCCCCCcH--HHHHHHHHHHHH------------------hC-CcCCcEEEEECCchhhHHHHHHHHHHc
Confidence 345689999876554444 233333333321 12 4789999999985 4888888888889
Q ss_pred CCEEEEECCCC---ChhH---H----HHcCC--e-ecCHHHHhccCCEEEEccCC--Cc--c--------ccccccHHHH
Q 006212 252 GMNVIAHDPYA---PADK---A----RAVGV--E-LVSFDQALATADFISLHMPL--NP--T--------TSKIFNDETF 306 (656)
Q Consensus 252 G~~Vi~~d~~~---~~~~---a----~~~g~--~-~~~l~ell~~aDvV~l~~Pl--t~--~--------T~~li~~~~l 306 (656)
|++|....|.. +.+. + ++.|. . ..++++.++++|+|..-+-. .. + ...-++.+.+
T Consensus 179 G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~y~v~~~~l 258 (321)
T 1oth_A 179 GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQGYQVTMKTA 258 (321)
T ss_dssp TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTTCCBCHHHH
T ss_pred CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccCceECHHHH
Confidence 99999988753 2211 1 13453 3 34899999999999984311 11 1 1144677888
Q ss_pred hcCCCCcEEEEcC
Q 006212 307 AKMKKGVRIVNVA 319 (656)
Q Consensus 307 ~~mK~gailINva 319 (656)
+.+||+++|.-|.
T Consensus 259 ~~a~~dai~mH~l 271 (321)
T 1oth_A 259 KVAASDWTFLHCL 271 (321)
T ss_dssp HTSCTTCEEEECS
T ss_pred hhcCCCCEEECCC
Confidence 8888888888885
No 240
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.45 E-value=0.0041 Score=65.23 Aligned_cols=71 Identities=23% Similarity=0.349 Sum_probs=53.2
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCC-hhHHHH--------cCC--ee---cCH---HHHhccCC
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP-ADKARA--------VGV--EL---VSF---DQALATAD 285 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~-~~~a~~--------~g~--~~---~~l---~ell~~aD 285 (656)
+.++.||++.|+|.|.+|+.++..|...|. +|.+++|... .+++++ .+. .. .++ .+.+.++|
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~D 222 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASAD 222 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCS
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCce
Confidence 456889999999999999999999999998 8999998732 222221 122 12 233 55688999
Q ss_pred EEEEccCCC
Q 006212 286 FISLHMPLN 294 (656)
Q Consensus 286 vV~l~~Plt 294 (656)
+|+.++|..
T Consensus 223 iIINaTp~G 231 (312)
T 3t4e_A 223 ILTNGTKVG 231 (312)
T ss_dssp EEEECSSTT
T ss_pred EEEECCcCC
Confidence 999999964
No 241
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.44 E-value=0.0087 Score=65.81 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=68.0
Q ss_pred ccccCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHcC--Ceec-CHHHHhccCCEEEEc
Q 006212 224 GVSLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAVG--VELV-SFDQALATADFISLH 290 (656)
Q Consensus 224 g~~l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g--~~~~-~l~ell~~aDvV~l~ 290 (656)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||+...+.....+ +.++ ++++.++.||.|+++
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~ 392 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHV 392 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEEC
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEc
Confidence 5578999999999852 36789999999999999999997433222333 5554 788999999999999
Q ss_pred cCCCccccccccHHHH-hcCCCCcEEEEcCCC
Q 006212 291 MPLNPTTSKIFNDETF-AKMKKGVRIVNVARG 321 (656)
Q Consensus 291 ~Plt~~T~~li~~~~l-~~mK~gailINvaRg 321 (656)
++- ++-+. ++-+.+ ..|+ +.+|+|+ |+
T Consensus 393 t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~ 420 (450)
T 3gg2_A 393 TEW-KEFRM-PDWSALSQAMA-ASLVIDG-RN 420 (450)
T ss_dssp SCC-GGGSS-CCHHHHHHHSS-SCEEEES-SC
T ss_pred cCC-HHHhh-cCHHHHHHhcC-CCEEEEC-CC
Confidence 883 33333 344444 4465 5689995 44
No 242
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.44 E-value=0.0034 Score=65.31 Aligned_cols=98 Identities=13% Similarity=0.191 Sum_probs=59.8
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCChhHHHHcCCee---cCHHHHhccCCEEEEccCCCccccccccHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPADKARAVGVEL---VSFDQALATADFISLHMPLNPTTSKIFNDE 304 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~~~a~~~g~~~---~~l~ell~~aDvV~l~~Plt~~T~~li~~~ 304 (656)
.+|||||+|+||+.+++.++.. ++++. ++|+.... ++..|+.+ .++.+. .++|+|++|+|... . -+.
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~--~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~--h---~~~ 81 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAE--VPFELQPFRVVSDIEQL-ESVDVALVCSPSRE--V---ERT 81 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------CCTTSCEESSGGGS-SSCCEEEECSCHHH--H---HHH
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHH--HHHcCCCcCCHHHHHhC-CCCCEEEECCCchh--h---HHH
Confidence 4799999999999999999864 78887 58876532 22256542 245444 78999999999332 1 122
Q ss_pred HHhcCCCCcEEEEcCC--Cch-hcHHHHHHhHhc
Q 006212 305 TFAKMKKGVRIVNVAR--GGV-IDEEALVRALDS 335 (656)
Q Consensus 305 ~l~~mK~gailINvaR--g~i-vde~aL~~aL~~ 335 (656)
....++.|.-+++..- +.. .+.+.|.++.++
T Consensus 82 ~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~ 115 (304)
T 3bio_A 82 ALEILKKGICTADSFDIHDGILALRRSLGDAAGK 115 (304)
T ss_dssp HHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHh
Confidence 2334667777776532 212 234455555554
No 243
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.44 E-value=0.013 Score=61.30 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=68.4
Q ss_pred ccCCCEEEEEecC---hhHHHHHHHHhcCCCEEEEECCCC--Ch----hHHHHcCCee---cCHHHHhccCCEEEEccCC
Q 006212 226 SLVGKTLAVMGFG---KVGSEVARRAKGLGMNVIAHDPYA--PA----DKARAVGVEL---VSFDQALATADFISLHMPL 293 (656)
Q Consensus 226 ~l~gktvGIIGlG---~IG~~vA~~lk~~G~~Vi~~d~~~--~~----~~a~~~g~~~---~~l~ell~~aDvV~l~~Pl 293 (656)
.+.|++|++||=| ++..+++..+..+|++|....|.. +. +.+++.|..+ .++++.+++||+|..-.=-
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~q 231 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQ 231 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCC
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCcc
Confidence 4789999999984 899999999999999999988753 22 2233446542 4899999999999885421
Q ss_pred Cc------c-----ccccccHHHHhcCCCCcEEEEcC
Q 006212 294 NP------T-----TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 294 t~------~-----T~~li~~~~l~~mK~gailINva 319 (656)
.+ + ...-++.+.++.+||++++.-|.
T Consensus 232 ~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 268 (308)
T 1ml4_A 232 KERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPL 268 (308)
T ss_dssp GGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCS
T ss_pred ccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCC
Confidence 10 0 02345677777778888888775
No 244
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.44 E-value=0.0034 Score=61.57 Aligned_cols=65 Identities=12% Similarity=0.220 Sum_probs=48.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hH-HHHcCCeec-----C---HHHH-hccCCEEEEccCCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DK-ARAVGVELV-----S---FDQA-LATADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~-a~~~g~~~~-----~---l~el-l~~aDvV~l~~Plt 294 (656)
++|.|+|+|.+|+.+|+.|...|.+|+++|++... +. ....|+..+ + ++++ +.+||+|++++|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence 36899999999999999999999999999987522 22 233455332 2 3443 67899999999844
No 245
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.43 E-value=0.0039 Score=65.35 Aligned_cols=99 Identities=17% Similarity=0.180 Sum_probs=64.0
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCChhHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccHHHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDETF 306 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 306 (656)
.+|||||+|+||+.+++.+... ++++. ++|++...... .|+.. .++++++.++|+|++|+|... . -+...
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~~~--~gv~~~~d~~~ll~~~DvViiatp~~~--h---~~~~~ 76 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDTK--TPVFDVADVDKHADDVDVLFLCMGSAT--D---IPEQA 76 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSSS--SCEEEGGGGGGTTTTCSEEEECSCTTT--H---HHHHH
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHhhc--CCCceeCCHHHHhcCCCEEEEcCCcHH--H---HHHHH
Confidence 3799999999999999999866 68765 57876432211 45543 377888889999999998432 1 12233
Q ss_pred hcCCCCcEEEEcCCCchh--cH-HHHHHhHhc
Q 006212 307 AKMKKGVRIVNVARGGVI--DE-EALVRALDS 335 (656)
Q Consensus 307 ~~mK~gailINvaRg~iv--de-~aL~~aL~~ 335 (656)
..++.|.-++...-..+- +. +.|.++.++
T Consensus 77 ~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~ 108 (320)
T 1f06_A 77 PKFAQFACTVDTYDNHRDIPRHRQVMNEAATA 108 (320)
T ss_dssp HHHTTTSEEECCCCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEECCCCcCCHHHHHHHHHHHHHh
Confidence 446777766665443332 22 345554444
No 246
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.40 E-value=0.0073 Score=64.19 Aligned_cols=63 Identities=22% Similarity=0.388 Sum_probs=46.9
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEE-EECCCCChhHHHHc-CCe-ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPADKARAV-GVE-LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi-~~d~~~~~~~a~~~-g~~-~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+. .+..++.. +++|. ++|+.... ..... ++. +.++++++. +.|+|++|+|.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 77 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEK-VKRDLPDVTVIASPEAAVQHPDVDLVVIASPN 77 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHH-HHHHCTTSEEESCHHHHHTCTTCSEEEECSCG
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHhhCCCCcEECCHHHHhcCCCCCEEEEeCCh
Confidence 47999999999997 77777766 78886 46876422 12233 444 358999998 79999999994
No 247
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.36 E-value=0.0022 Score=64.95 Aligned_cols=105 Identities=17% Similarity=0.207 Sum_probs=65.4
Q ss_pred HHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-------------------ChhH-
Q 006212 208 ADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-------------------PADK- 266 (656)
Q Consensus 208 ~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-------------------~~~~- 266 (656)
+.++++-.+|... .-..|.+++|.|||.|.+|..+|+.|...|. ++..+|+.. +...
T Consensus 12 y~Rq~~l~~~g~~--~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~ 89 (249)
T 1jw9_B 12 YNRQIILRGFDFD--GQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVES 89 (249)
T ss_dssp THHHHTSTTTHHH--HHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHH
T ss_pred hhheecccccCHH--HHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHH
Confidence 3444444446431 1235889999999999999999999998897 888888764 1111
Q ss_pred H----HHc--CCe--e----c---CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEc
Q 006212 267 A----RAV--GVE--L----V---SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 267 a----~~~--g~~--~----~---~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINv 318 (656)
+ .+. ++. . . +++++++++|+|+.+++ +.+++.++++..... +..+|+.
T Consensus 90 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 90 ARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred HHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 1 111 121 1 1 24566778888888876 455666666554432 3335554
No 248
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.34 E-value=0.0078 Score=63.26 Aligned_cols=62 Identities=19% Similarity=0.251 Sum_probs=46.4
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhH--HHH-------c--C--Cee-cCHHHHhccCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADK--ARA-------V--G--VEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~--a~~-------~--g--~~~-~~l~ell~~aDvV~l~~P 292 (656)
++|+|||.|.+|..+|..+...|+ +|..+|....... +.. . . +.. .++ +.+++||+|+++++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 589999999999999999998787 8999998753211 100 1 1 122 366 77999999999993
No 249
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.0033 Score=67.89 Aligned_cols=89 Identities=16% Similarity=0.239 Sum_probs=61.2
Q ss_pred EEEEEecChhHHHHHHHHhcCC--------CEEEEECCCCC---hhHHHHc-----------CC------ee-cCHHHHh
Q 006212 231 TLAVMGFGKVGSEVARRAKGLG--------MNVIAHDPYAP---ADKARAV-----------GV------EL-VSFDQAL 281 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G--------~~Vi~~d~~~~---~~~a~~~-----------g~------~~-~~l~ell 281 (656)
+|+|||.|..|.++|..|..-| .+|..|.+... ....... |+ .. .++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 7999999999999999987432 46877765421 1111110 12 22 3799999
Q ss_pred ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 282 ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 282 ~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
+.||+|++++| ....+.++ ++....++++..+|+++.|
T Consensus 116 ~~ad~ii~avP-s~~~r~~l-~~l~~~~~~~~~iv~~~KG 153 (391)
T 4fgw_A 116 KDVDIIVFNIP-HQFLPRIC-SQLKGHVDSHVRAISCLKG 153 (391)
T ss_dssp TTCSEEEECSC-GGGHHHHH-HHHTTTSCTTCEEEECCCS
T ss_pred hcCCEEEEECC-hhhhHHHH-HHhccccCCCceeEEeccc
Confidence 99999999999 44344443 2333457889999999987
No 250
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.33 E-value=0.0099 Score=62.59 Aligned_cols=62 Identities=16% Similarity=0.269 Sum_probs=47.0
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHH--HH-------c--C--Cee-cCHHHHhccCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--RA-------V--G--VEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a--~~-------~--g--~~~-~~l~ell~~aDvV~l~~P 292 (656)
++|+|||.|.+|..+|..+...|+ +|..||........ .. . . +.. .++ +.+++||+|+++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 689999999999999999998888 99999987532111 00 0 1 222 356 77899999999994
No 251
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.32 E-value=0.011 Score=62.48 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=64.5
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCC--hhHHHHcCC----e-ecCHHHHhc--cCCEEEEccCCCcccc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAP--ADKARAVGV----E-LVSFDQALA--TADFISLHMPLNPTTS 298 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~--~~~a~~~g~----~-~~~l~ell~--~aDvV~l~~Plt~~T~ 298 (656)
.+|||||+|.||+.+++.++.. ++++. ++|+... ...+.+.|+ . +.+++++++ ++|+|++|+|.. ..
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~--~h 84 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS--LH 84 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG--GH
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChH--HH
Confidence 3799999999999999998865 67765 5787652 223445563 3 348999986 599999999933 22
Q ss_pred ccccHHHHhcCCCCc-EEEEc-CCCchhcHHHHHHhHhcC
Q 006212 299 KIFNDETFAKMKKGV-RIVNV-ARGGVIDEEALVRALDSG 336 (656)
Q Consensus 299 ~li~~~~l~~mK~ga-ilINv-aRg~ivde~aL~~aL~~g 336 (656)
. +-....++.|. +++.- ---.+-+.++|.++.++.
T Consensus 85 ~---~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~ 121 (362)
T 1ydw_A 85 V---EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEAN 121 (362)
T ss_dssp H---HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTT
T ss_pred H---HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 1 22233356665 34332 112233456677766654
No 252
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.32 E-value=0.0051 Score=65.33 Aligned_cols=88 Identities=20% Similarity=0.258 Sum_probs=64.9
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHH-HcCCeec----C---HHHHhccCCEEEEccCCCcccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKAR-AVGVELV----S---FDQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~-~~g~~~~----~---l~ell~~aDvV~l~~Plt~~T~ 298 (656)
.|++|.|+|.|.||...++.++.+|++|++.++.. ..+.+. ++|...+ + +.++....|+|+-++.....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~-- 264 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHP-- 264 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHH--
Confidence 68999999999999999999999999999998765 334444 6776422 2 23334568999888874321
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaR 320 (656)
-...+..|+++..+++++.
T Consensus 265 ---~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 265 ---LLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ---SHHHHHHEEEEEEEEECCC
T ss_pred ---HHHHHHHHhcCCEEEEEcc
Confidence 2456677888888888874
No 253
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.32 E-value=0.032 Score=58.31 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=66.9
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--C-hhH-HHHcCC--ee-cCHHHHhccCCEEEEcc----CC
Q 006212 226 SLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--P-ADK-ARAVGV--EL-VSFDQALATADFISLHM----PL 293 (656)
Q Consensus 226 ~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~-~~~-a~~~g~--~~-~~l~ell~~aDvV~l~~----Pl 293 (656)
.+.|++|+|||= +++..+++..+..+|++|....|.. + .+. +++.|. .. .++++.+++||+|..-+ ..
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~ 230 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGF 230 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC-----
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcc
Confidence 478999999986 5788888888989999999988742 2 221 223333 33 38999999999998743 10
Q ss_pred ---Ccc-----ccccccHHHHhcCCCCcEEEEcC
Q 006212 294 ---NPT-----TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 294 ---t~~-----T~~li~~~~l~~mK~gailINva 319 (656)
..+ ...-++.+.++.+|++++|.-|.
T Consensus 231 e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 231 EAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp -------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred hhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 000 12446888888889999998886
No 254
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.29 E-value=0.0051 Score=60.91 Aligned_cols=85 Identities=16% Similarity=0.289 Sum_probs=56.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHHcCCeec-----C---HHHH-hccCCEEEEccCCCcccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTS 298 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~~g~~~~-----~---l~el-l~~aDvV~l~~Plt~~T~ 298 (656)
.+++.|+|+|.+|+.+|+.|...|. |+++|++... +.+. .|+..+ + |+++ +.+||.|++++|... .
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--~ 84 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--E 84 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH--H
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH--H
Confidence 4689999999999999999999999 9999987532 2333 565432 2 3333 788999999998432 2
Q ss_pred ccccHHHHhcCCCCcEEEE
Q 006212 299 KIFNDETFAKMKKGVRIVN 317 (656)
Q Consensus 299 ~li~~~~l~~mK~gailIN 317 (656)
++.-......+.++..++-
T Consensus 85 n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 2222334455666634433
No 255
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.25 E-value=0.073 Score=56.29 Aligned_cols=129 Identities=16% Similarity=0.190 Sum_probs=82.2
Q ss_pred HHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEec-ChhHHHHHHHHhc
Q 006212 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-GKVGSEVARRAKG 250 (656)
Q Consensus 172 a~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-G~IG~~vA~~lk~ 250 (656)
|...+|+|+|+-+....++ .+++=++.+.++.+ .|..+.|++|++||= +++..+++..+..
T Consensus 136 A~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~~----------------~G~~l~glkva~vGD~~rva~Sl~~~~~~ 197 (339)
T 4a8t_A 136 ANCATIPVINGMSDYNHPT--QELGDLCTMVEHLP----------------EGKKLEDCKVVFVGDATQVCFSLGLITTK 197 (339)
T ss_dssp HHHCSSCEEECCCSSCCHH--HHHHHHHHHHHTCC----------------TTCCGGGCEEEEESSCCHHHHHHHHHHHH
T ss_pred HHhCCCCEEECCCCCcCcH--HHHHHHHHHHHHhh----------------cCCCCCCCEEEEECCCchhHHHHHHHHHH
Confidence 3445789999866443333 22333333332110 032578999999986 6788899999999
Q ss_pred CCCEEEEECCCC--Ch-hH-------HHHcCCe--e-cCHHHHhccCCEEEEcc--CCC--ccc----------cccccH
Q 006212 251 LGMNVIAHDPYA--PA-DK-------ARAVGVE--L-VSFDQALATADFISLHM--PLN--PTT----------SKIFND 303 (656)
Q Consensus 251 ~G~~Vi~~d~~~--~~-~~-------a~~~g~~--~-~~l~ell~~aDvV~l~~--Plt--~~T----------~~li~~ 303 (656)
+|++|....|.. +. .. +.+.|.. . .+++ .+++||+|..-+ ... .+. ..-++.
T Consensus 198 ~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~w~smg~~~~~~~er~~~~~~~y~vt~ 276 (339)
T 4a8t_A 198 MGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQ 276 (339)
T ss_dssp TTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECCSSCCTTSCCCHHHHHHHHTTTTCBCH
T ss_pred cCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecCcccCCchhhhhHHHHHHhccccccCH
Confidence 999999988753 22 11 2344643 2 3899 999999998732 111 110 144677
Q ss_pred HHHhcCCCCcEEEEcC
Q 006212 304 ETFAKMKKGVRIVNVA 319 (656)
Q Consensus 304 ~~l~~mK~gailINva 319 (656)
+.++.+|++++|.-|.
T Consensus 277 ell~~ak~dai~mHcL 292 (339)
T 4a8t_A 277 EMMDRAGANCKFMHCL 292 (339)
T ss_dssp HHHHHHCTTCEEEECS
T ss_pred HHHHhcCCCcEEECCC
Confidence 7777788888888886
No 256
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=96.24 E-value=0.028 Score=58.81 Aligned_cols=94 Identities=14% Similarity=0.221 Sum_probs=68.4
Q ss_pred ccCCCEEEEEec---ChhHHHHHHHHhcC-CCEEEEECCCC--C-h---hHHHHcCCee---cCHHHHhccCCEEEEccC
Q 006212 226 SLVGKTLAVMGF---GKVGSEVARRAKGL-GMNVIAHDPYA--P-A---DKARAVGVEL---VSFDQALATADFISLHMP 292 (656)
Q Consensus 226 ~l~gktvGIIGl---G~IG~~vA~~lk~~-G~~Vi~~d~~~--~-~---~~a~~~g~~~---~~l~ell~~aDvV~l~~P 292 (656)
.+.|++|+++|= |++..+++..+..+ |++|....|.. + . +.+++.|..+ .++++.+++||+|..-.=
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~~ 230 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRV 230 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC-
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECCc
Confidence 478999999998 59999999999999 99999988753 2 2 2234456542 389999999999987543
Q ss_pred CCc----cc------cccccHHHHhcCCCCcEEEEcC
Q 006212 293 LNP----TT------SKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 293 lt~----~T------~~li~~~~l~~mK~gailINva 319 (656)
-.+ +. ..-++.+.++.+||++++.-|.
T Consensus 231 q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~l 267 (310)
T 3csu_A 231 QKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPL 267 (310)
T ss_dssp ----------------CCBCGGGGTTCCTTCEEECCS
T ss_pred cccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCC
Confidence 111 00 2345777788888888888886
No 257
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=96.20 E-value=0.028 Score=61.51 Aligned_cols=96 Identities=19% Similarity=0.234 Sum_probs=64.6
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE--------ECCCC-ChhH------------------HHHcCCeecC
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADK------------------ARAVGVELVS 276 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~--------~d~~~-~~~~------------------a~~~g~~~~~ 276 (656)
+.++.|||+.|=|+|++|..+|+.|...|.+|++ |||.- +.+. +.+.|..+++
T Consensus 230 ~~~l~Gk~vaVQG~GnVG~~aa~~L~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~~~~~ 309 (450)
T 4fcc_A 230 GMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGLVYLE 309 (450)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTCEEEE
T ss_pred CCCcCCCEEEEeCCChHHHHHHHHHHhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCcEEec
Confidence 4578999999999999999999999999999986 45542 2211 1122444444
Q ss_pred HHHHh-ccCCEEEEccCCCccccccccHHHHhcCCCC--cEEEEcCCCchh
Q 006212 277 FDQAL-ATADFISLHMPLNPTTSKIFNDETFAKMKKG--VRIVNVARGGVI 324 (656)
Q Consensus 277 l~ell-~~aDvV~l~~Plt~~T~~li~~~~l~~mK~g--ailINvaRg~iv 324 (656)
-++++ -+||+.+-|. +.+.|+.+....++.+ .++++-+-+.+-
T Consensus 310 ~~~i~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t 355 (450)
T 4fcc_A 310 GQQPWSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTT 355 (450)
T ss_dssp TCCGGGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBC
T ss_pred CcccccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCC
Confidence 34443 3688887765 3455777777776543 466666666653
No 258
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.16 E-value=0.015 Score=60.20 Aligned_cols=91 Identities=18% Similarity=0.208 Sum_probs=59.0
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCC-hh-HHH--HcCC------e--ec-CHHHHhccCCEEEEccCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAP-AD-KAR--AVGV------E--LV-SFDQALATADFISLHMPL 293 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~-~~-~a~--~~g~------~--~~-~l~ell~~aDvV~l~~Pl 293 (656)
.++|+|||.|.||..+|..|...|. +|..+|+... .+ .+. ..+. . .. + .+.++.||+|+++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAGP 85 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCC-HHHhCCCCEEEECCCC
Confidence 4689999999999999999998888 9999998742 11 111 1221 1 11 3 3567899999999963
Q ss_pred Ccccccc------------cc--HHHHhcCCCCcEEEEcCCC
Q 006212 294 NPTTSKI------------FN--DETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 294 t~~T~~l------------i~--~~~l~~mK~gailINvaRg 321 (656)
. ...+. +. ...+....++++++++.-|
T Consensus 86 ~-~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np 126 (319)
T 1lld_A 86 R-QKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 126 (319)
T ss_dssp C-CCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred C-CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCc
Confidence 2 22211 00 1122223678899988654
No 259
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.16 E-value=0.04 Score=58.69 Aligned_cols=127 Identities=22% Similarity=0.264 Sum_probs=85.3
Q ss_pred HHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHHh
Q 006212 172 ATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAK 249 (656)
Q Consensus 172 a~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~lk 249 (656)
|.-.+|+|.|+-+....++ .+|+=++.+.++ .| .+.|.+|++||=| ++..+++..+.
T Consensus 140 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~------------------~g-~l~gl~va~vGD~~~rva~Sl~~~~~ 198 (359)
T 2w37_A 140 ARDSGVPVWNGLTDEWHPT--QMLADFMTVKEN------------------FG-KLQGLTLTFMGDGRNNVANSLLVTGA 198 (359)
T ss_dssp HHHSSSCEEEEECSSCCHH--HHHHHHHHHHHH------------------HS-CCTTCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHH------------------hC-CcCCeEEEEECCCccchHHHHHHHHH
Confidence 3345688999765444333 233333333321 12 4789999999996 99999999999
Q ss_pred cCCCEEEEECCCC---ChhH-------HHHcCC--ee-cCHHHHhccCCEEEEccCC--Ccc---------ccccccHHH
Q 006212 250 GLGMNVIAHDPYA---PADK-------ARAVGV--EL-VSFDQALATADFISLHMPL--NPT---------TSKIFNDET 305 (656)
Q Consensus 250 ~~G~~Vi~~d~~~---~~~~-------a~~~g~--~~-~~l~ell~~aDvV~l~~Pl--t~~---------T~~li~~~~ 305 (656)
.+|++|....|.. +.+. +++.|. .. .++++.+++||+|..-.=. ..+ ...-++.+.
T Consensus 199 ~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~el 278 (359)
T 2w37_A 199 ILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEA 278 (359)
T ss_dssp HHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHH
T ss_pred HcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHH
Confidence 9999999988753 2211 125564 33 4899999999999883320 000 124567888
Q ss_pred HhcCC---CCcEEEEcC
Q 006212 306 FAKMK---KGVRIVNVA 319 (656)
Q Consensus 306 l~~mK---~gailINva 319 (656)
++.+| ++++|.-|.
T Consensus 279 l~~ak~~~~dai~MHcL 295 (359)
T 2w37_A 279 MKKTGTPDDQLIFMHCL 295 (359)
T ss_dssp HHTTCCCGGGCEEEECS
T ss_pred HHhhCCCCCCEEEECCC
Confidence 88888 899998886
No 260
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.15 E-value=0.0087 Score=63.12 Aligned_cols=94 Identities=15% Similarity=0.081 Sum_probs=61.5
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhHH----HHc-------CCee-cCHHHHhccCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADKA----RAV-------GVEL-VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~a----~~~-------g~~~-~~l~ell~~aDvV~l~~Plt 294 (656)
.++|+|||.|.||.++|..+...|+ +|..+|........ .+. ++.. .+..+.+++||+|+++.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~- 83 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA- 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc-
Confidence 5689999999999999999987776 99999986421111 111 1222 2234678999999999863
Q ss_pred cccccc-----c--cH-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 295 PTTSKI-----F--ND-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 295 ~~T~~l-----i--~~-------~~l~~mK~gailINvaRg~ivd 325 (656)
+...++ + |. +.+....|++++++++ ..+|
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt--NPvd 126 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT--NPVD 126 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC--ChHH
Confidence 332222 1 11 1233356789999997 4444
No 261
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.14 E-value=0.0086 Score=65.60 Aligned_cols=94 Identities=21% Similarity=0.212 Sum_probs=71.2
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC---EEEEEC----CC--CChh-H---HH--------HcCC--eecCHHHH
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM---NVIAHD----PY--APAD-K---AR--------AVGV--ELVSFDQA 280 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~---~Vi~~d----~~--~~~~-~---a~--------~~g~--~~~~l~el 280 (656)
|..+.++++.|+|.|..|+.+++.|...|. +|+.+| +. .... . .. ..+. ...++.+.
T Consensus 181 g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~ 260 (439)
T 2dvm_A 181 GKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEA 260 (439)
T ss_dssp TCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHH
T ss_pred CCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHH
Confidence 456889999999999999999999999998 799998 65 2111 1 11 0111 13468899
Q ss_pred hccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006212 281 LATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 281 l~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaR 320 (656)
++++|+|+-++|..+ +++.++.++.|+++.++.|++.
T Consensus 261 l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLyn 297 (439)
T 2dvm_A 261 LKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLAN 297 (439)
T ss_dssp HTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCS
T ss_pred hccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCC
Confidence 999999999998532 4566667788999999999953
No 262
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.14 E-value=0.018 Score=63.40 Aligned_cols=93 Identities=18% Similarity=0.198 Sum_probs=67.9
Q ss_pred ccCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHc--------------CCeec-CHHHH
Q 006212 226 SLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAV--------------GVELV-SFDQA 280 (656)
Q Consensus 226 ~l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~--------------g~~~~-~l~el 280 (656)
.+.|++|+|+|+-- -...+++.|...|.+|.+|||+...+..... ++.+. ++.+.
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEA 405 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHH
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHH
Confidence 58999999999974 6778999999999999999998754432111 24444 68889
Q ss_pred hccCCEEEEccCCCccccccccHHHH-hcCCCCcEEEEcCCC
Q 006212 281 LATADFISLHMPLNPTTSKIFNDETF-AKMKKGVRIVNVARG 321 (656)
Q Consensus 281 l~~aDvV~l~~Plt~~T~~li~~~~l-~~mK~gailINvaRg 321 (656)
++.||.|++++.- ++-+. ++-+.+ ..|+...+|+|+ |+
T Consensus 406 ~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~ 444 (467)
T 2q3e_A 406 CDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RR 444 (467)
T ss_dssp HTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SC
T ss_pred HhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CC
Confidence 9999999999984 33333 344443 457776668886 44
No 263
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.13 E-value=0.0093 Score=63.23 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=52.9
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEE-ECCCCCh--hHHHHcCCeec------------------CHHHHhccCCEEE
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAPA--DKARAVGVELV------------------SFDQALATADFIS 288 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~-~d~~~~~--~~a~~~g~~~~------------------~l~ell~~aDvV~ 288 (656)
+|||+|+|+||+.+++.+... ++++.+ .|+.... ..+...|+... ++++++.++|+|+
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~ 82 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEE
Confidence 799999999999999999865 678766 4654321 22333343221 3445566899999
Q ss_pred EccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 289 l~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
.|+|... +... ... .++.|+.+|+.+
T Consensus 83 ~aTp~~~-s~~~--a~~--~~~aG~kvV~~s 108 (340)
T 1b7g_O 83 DTTPNGV-GAQY--KPI--YLQLQRNAIFQG 108 (340)
T ss_dssp ECCSTTH-HHHH--HHH--HHHTTCEEEECT
T ss_pred ECCCCch-hHHH--HHH--HHHcCCeEEEeC
Confidence 9998432 1111 111 235677777765
No 264
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=96.12 E-value=0.095 Score=55.05 Aligned_cols=126 Identities=13% Similarity=0.011 Sum_probs=79.1
Q ss_pred hHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccc-cccCCCEEEE-----EecChhHHHH
Q 006212 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAV-----MGFGKVGSEV 244 (656)
Q Consensus 171 aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGI-----IGlG~IG~~v 244 (656)
.|+-.+|+|+|.-+....++ .+++=++.+.++ .| ..+. .+|++ +|=+++..++
T Consensus 130 lA~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~------------------~g~~~l~-l~ia~a~~~~vGD~rva~Sl 188 (324)
T 1js1_X 130 FIQHSGRPVFSMEAATRHPL--QSFADLITIEEY------------------KKTARPK-VVMTWAPHPRPLPQAVPNSF 188 (324)
T ss_dssp HHHHSSSCEEESSCSSCCHH--HHHHHHHHHHHH------------------CSSSSCE-EEEECCCCSSCCCSHHHHHH
T ss_pred HHhhCCCCEEECCCCCCCcH--HHHHHHHHHHHH------------------cCCCCee-EEEEEEcccccCCcchHHHH
Confidence 34455799999866444443 233333333321 12 1356 89999 9999999999
Q ss_pred HHHHhcCCCEEEEECCCC--ChhHHHHcCCee-cCHHHHhccCCEEEEccCCC--c---------cccccccHHHHhcCC
Q 006212 245 ARRAKGLGMNVIAHDPYA--PADKARAVGVEL-VSFDQALATADFISLHMPLN--P---------TTSKIFNDETFAKMK 310 (656)
Q Consensus 245 A~~lk~~G~~Vi~~d~~~--~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt--~---------~T~~li~~~~l~~mK 310 (656)
+..+..+|++|....|.. +..... .++.. .++++.+++||+|..-.=.. . .....++.+.++.+|
T Consensus 189 ~~~~~~~G~~v~~~~P~~~~~~~~~~-~~~~~~~d~~eav~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~ 267 (324)
T 1js1_X 189 AEWMNATDYEFVITHPEGYELDPKFV-GNARVEYDQMKAFEGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN 267 (324)
T ss_dssp HHHHHTSSSEEEEECCTTCCCCHHHH-TTCEEESCHHHHHTTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS
T ss_pred HHHHHHCCCEEEEeCCcccCCChhhc-cceEEECCHHHHhCCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC
Confidence 999999999999998854 222221 35554 48999999999998833211 0 011334555555555
Q ss_pred CCcEEEEcC
Q 006212 311 KGVRIVNVA 319 (656)
Q Consensus 311 ~gailINva 319 (656)
++++.-|.
T Consensus 268 -~ai~MHcL 275 (324)
T 1js1_X 268 -NAYFMHCL 275 (324)
T ss_dssp -SCEEECCS
T ss_pred -CcEEECCC
Confidence 55555554
No 265
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.12 E-value=0.023 Score=59.65 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=61.8
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhH--HHHc---------CCee--cCHHHHhccCCEEEEccCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADK--ARAV---------GVEL--VSFDQALATADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~--a~~~---------g~~~--~~l~ell~~aDvV~l~~Pl 293 (656)
..++|+|||.|.+|.++|..+...|+ +|..+|....... +.++ .... .+-.+.+++||+|+++.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 35799999999999999999987666 9999998763211 1111 1222 2335789999999999763
Q ss_pred Cccccccc-------cH-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 294 NPTTSKIF-------ND-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 294 t~~T~~li-------~~-------~~l~~mK~gailINvaRg~ivd 325 (656)
+...++- |. +.+....|++++++++ ..+|
T Consensus 84 -p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd 126 (321)
T 3p7m_A 84 -PRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLD 126 (321)
T ss_dssp -CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHH
T ss_pred -CCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchH
Confidence 3222221 11 1222345889999995 4555
No 266
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.09 E-value=0.0097 Score=62.53 Aligned_cols=88 Identities=22% Similarity=0.264 Sum_probs=65.3
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec--CHHHHhccCCEEEEccCCCccccccccHH
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV--SFDQALATADFISLHMPLNPTTSKIFNDE 304 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~--~l~ell~~aDvV~l~~Plt~~T~~li~~~ 304 (656)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|...+ +.+++.+..|+|+-++.... .-..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~-----~~~~ 250 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHY-----DLKD 250 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCC-----CHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHH-----HHHH
Confidence 48899999999999999999999999999999776 5677788887432 33333336788887776331 1244
Q ss_pred HHhcCCCCcEEEEcCC
Q 006212 305 TFAKMKKGVRIVNVAR 320 (656)
Q Consensus 305 ~l~~mK~gailINvaR 320 (656)
.+..++++..++.++.
T Consensus 251 ~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 251 YLKLLTYNGDLALVGL 266 (348)
T ss_dssp HHTTEEEEEEEEECCC
T ss_pred HHHHHhcCCEEEEECC
Confidence 5666788888888764
No 267
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.09 E-value=0.0059 Score=64.80 Aligned_cols=63 Identities=16% Similarity=0.240 Sum_probs=47.1
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEE-EECCCCCh--hHHHHcC-Ce-ecCHHHHhccC--CEEEEccC
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPA--DKARAVG-VE-LVSFDQALATA--DFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi-~~d~~~~~--~~a~~~g-~~-~~~l~ell~~a--DvV~l~~P 292 (656)
.+|||||+|.||+. +++.++.. +.++. ++|++... ..+...+ .. +.++++++.+. |+|++|+|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCC
Confidence 48999999999995 88988876 78877 67887522 2223332 33 45899999854 99999999
No 268
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.09 E-value=0.013 Score=60.11 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=49.9
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCC--hhHHHHcCCeec-CHHHHhccCCEEEEccCCCc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAP--ADKARAVGVELV-SFDQALATADFISLHMPLNP 295 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~--~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~ 295 (656)
.++++.|||.|.+|+.++..|...|. +|.+++|... ...+...+..+. ++. +.++|+|+.++|...
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm 187 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGM 187 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCc
Confidence 47899999999999999999999997 7999998752 223344454333 222 468999999999653
No 269
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.08 E-value=0.0088 Score=62.74 Aligned_cols=93 Identities=22% Similarity=0.252 Sum_probs=60.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhH--HHH-------c--CCee--cCHHHHhccCCEEEEccCCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARA-------V--GVEL--VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~--a~~-------~--g~~~--~~l~ell~~aDvV~l~~Plt 294 (656)
.+|+|||.|.||.++|..+...|+ +|..+|....... +.+ . .... .+..+.+++||+|+++.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~- 79 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGL- 79 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCC-
Confidence 479999999999999999987666 9999998763211 111 1 1222 2567889999999999874
Q ss_pred ccccccc-------cH-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 295 PTTSKIF-------ND-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 295 ~~T~~li-------~~-------~~l~~mK~gailINvaRg~ivd 325 (656)
+...++- |. +.+....|++++++++ ..+|
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd 122 (314)
T 3nep_X 80 PRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA--NPLD 122 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC--SSHH
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC--Cchh
Confidence 3222221 11 1233456889999997 4444
No 270
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=96.07 E-value=0.079 Score=56.02 Aligned_cols=94 Identities=22% Similarity=0.324 Sum_probs=68.0
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--C-hh---H----HHHcCCe--e-cCHHHHhccCCEEEEcc
Q 006212 226 SLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--P-AD---K----ARAVGVE--L-VSFDQALATADFISLHM 291 (656)
Q Consensus 226 ~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~-~~---~----a~~~g~~--~-~~l~ell~~aDvV~l~~ 291 (656)
.+.|++|+|||= +++..+++..+..+|++|....|.. + .+ . +++.|.. . .++++.+++||+|..-.
T Consensus 176 ~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~~ 255 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTDV 255 (340)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEecC
Confidence 378999999986 5788888888989999999988753 2 21 1 2345643 2 38999999999998744
Q ss_pred CCCc----c-------ccccccHHHHhcCCCCcEEEEcC
Q 006212 292 PLNP----T-------TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Plt~----~-------T~~li~~~~l~~mK~gailINva 319 (656)
=... + ...-++.+.++.+|++++|.-|.
T Consensus 256 w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 256 WMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp C------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred ccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 2110 0 12356888888889999999886
No 271
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.07 E-value=0.0067 Score=61.68 Aligned_cols=96 Identities=16% Similarity=0.238 Sum_probs=66.6
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEE-EECCCCChhHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccHHH
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDET 305 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi-~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 305 (656)
+..+|+++|+|.||+.+++. . ++++. +|+ .. +.++|+.. .++++++.++|+|+=|.+. + -+.+..
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~-~k----~gelgv~a~~d~d~lla~pD~VVe~A~~-~----av~e~~ 77 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD-RI----SKDIPGVVRLDEFQVPSDVSTVVECASP-E----AVKEYS 77 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC-SS----CCCCSSSEECSSCCCCTTCCEEEECSCH-H----HHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe-cc----ccccCceeeCCHHHHhhCCCEEEECCCH-H----HHHHHH
Confidence 46799999999999999998 4 78764 467 22 11226654 4799999999999887752 1 233334
Q ss_pred HhcCCCCcEEEEcCCCchhcH---HHHHHhHhcC
Q 006212 306 FAKMKKGVRIVNVARGGVIDE---EALVRALDSG 336 (656)
Q Consensus 306 l~~mK~gailINvaRg~ivde---~aL~~aL~~g 336 (656)
..-|+.|.=++-++-|.+.|. +.|.++-++|
T Consensus 78 ~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~g 111 (253)
T 1j5p_A 78 LQILKNPVNYIIISTSAFADEVFRERFFSELKNS 111 (253)
T ss_dssp HHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHC
Confidence 455899999999988888775 3444444443
No 272
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.05 E-value=0.008 Score=63.54 Aligned_cols=64 Identities=19% Similarity=0.293 Sum_probs=47.1
Q ss_pred CCEEEEEecChhHHHHHHHHhcC--------CCEEEE-ECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGL--------GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~--------G~~Vi~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 292 (656)
--+|||||+|.||+.-++.++.. +++|.+ +|++.. ...+++.|+. +.+++++++ +.|+|++|+|
T Consensus 25 kirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP 103 (393)
T 4fb5_A 25 PLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTP 103 (393)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSC
T ss_pred CccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCC
Confidence 34899999999999877766542 567765 688753 3456667874 458999986 5799999999
No 273
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.05 E-value=0.0076 Score=63.27 Aligned_cols=62 Identities=19% Similarity=0.311 Sum_probs=47.9
Q ss_pred EEEEEecChhHHH-HHHHHhcC-CCEEEE-ECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccC
Q 006212 231 TLAVMGFGKVGSE-VARRAKGL-GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 231 tvGIIGlG~IG~~-vA~~lk~~-G~~Vi~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 292 (656)
++||||+|.||+. .+..++.. +++|.+ +|++.. .+.+++.|+. +.+++++++ +.|+|++|+|
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP 95 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLP 95 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSC
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCC
Confidence 7999999999986 56677755 788875 788752 3445667874 458999985 5899999999
No 274
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.02 E-value=0.09 Score=55.91 Aligned_cols=93 Identities=15% Similarity=0.212 Sum_probs=64.8
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--Ch-hH-------HHHcCCe--e-cCHHHHhccCCEEEEcc
Q 006212 226 SLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--PA-DK-------ARAVGVE--L-VSFDQALATADFISLHM 291 (656)
Q Consensus 226 ~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~~-~~-------a~~~g~~--~-~~l~ell~~aDvV~l~~ 291 (656)
.+.|++|+|||= +++..+++..+..+|++|....|.. +. .. +.+.|.. . .+++ .++++|+|..-+
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 578999999986 6888899999999999999988753 22 11 2344643 2 4899 999999998732
Q ss_pred --CCCc--cc----------cccccHHHHhcCCCCcEEEEcC
Q 006212 292 --PLNP--TT----------SKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 --Plt~--~T----------~~li~~~~l~~mK~gailINva 319 (656)
...+ +. ..-++.+.++.+|++++|.-|.
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcL 270 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCL 270 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECS
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCC
Confidence 1001 10 1345677777777777777775
No 275
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.01 E-value=0.0074 Score=63.65 Aligned_cols=97 Identities=16% Similarity=0.119 Sum_probs=60.3
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhH--HHHc--------CCee-cCHHHHhccCCEEEEccCC
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARAV--------GVEL-VSFDQALATADFISLHMPL 293 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~--a~~~--------g~~~-~~l~ell~~aDvV~l~~Pl 293 (656)
-.+++|+|||.|.||.++|..+...|+ ++..+|....... +.++ .+.. .+..+.+++||+|+++...
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 356799999999999999999987666 8999998642111 1111 1222 2446779999999998763
Q ss_pred Cc---cccc-cc--cH-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 294 NP---TTSK-IF--ND-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 294 t~---~T~~-li--~~-------~~l~~mK~gailINvaRg~ivd 325 (656)
.. +++. ++ |. +.+....|++++++++ ..+|
T Consensus 87 ~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt--NPvd 129 (326)
T 3vku_A 87 PQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVD 129 (326)
T ss_dssp C----------------CHHHHHHHHHTTTCCSEEEECS--SSHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc--CchH
Confidence 21 1221 22 11 2233456788899886 4444
No 276
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=96.01 E-value=0.08 Score=55.78 Aligned_cols=133 Identities=14% Similarity=0.092 Sum_probs=83.8
Q ss_pred HhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHHhc
Q 006212 173 TEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRAKG 250 (656)
Q Consensus 173 ~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~lk~ 250 (656)
...+|+|+|+-.....++ .+++=++.+.++. | |.. .....+.|++|++||=| ++..+++..+..
T Consensus 119 ~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~---------g-~~~--~~~~~l~gl~va~vGD~~~~va~Sl~~~~~~ 184 (328)
T 3grf_A 119 QHASVPCINALDDFGHPL--QMVCDFMTIKEKF---------T-AAG--EFSNGFKGIKFAYCGDSMNNVTYDLMRGCAL 184 (328)
T ss_dssp HHCSSCEEESSCSSCCHH--HHHHHHHHHHHHH---------H-HTT--CCTTTGGGCCEEEESCCSSHHHHHHHHHHHH
T ss_pred HhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh---------C-Ccc--ccccccCCcEEEEeCCCCcchHHHHHHHHHH
Confidence 345688999866544333 2233333333321 1 110 01235889999999986 889999999999
Q ss_pred CCCEEEEECCCC-C---h-h---HHH----H--cCCe--e-cCHHHHhccCCEEEEc----cCCCcc---------cccc
Q 006212 251 LGMNVIAHDPYA-P---A-D---KAR----A--VGVE--L-VSFDQALATADFISLH----MPLNPT---------TSKI 300 (656)
Q Consensus 251 ~G~~Vi~~d~~~-~---~-~---~a~----~--~g~~--~-~~l~ell~~aDvV~l~----~Plt~~---------T~~l 300 (656)
+|++|....|.. . . + .++ + .|.. . .++++.+++||+|..- +...++ ...-
T Consensus 185 ~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~ 264 (328)
T 3grf_A 185 LGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKGCEGVDVVYTDSWMSYHITKEQKEARLKVLTPFQ 264 (328)
T ss_dssp HTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHHHTTCSEEEECCCC--------CCTHHHHHGGGC
T ss_pred cCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHHhcCCCEEEecCccccCCcHHHHHHHHHHhcCCC
Confidence 999999988753 1 1 1 122 2 4542 2 4899999999999863 121111 1234
Q ss_pred ccHHHHhcCCCCcEEEEcC
Q 006212 301 FNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 301 i~~~~l~~mK~gailINva 319 (656)
++.+.++.+|++++|.-|.
T Consensus 265 vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 265 VDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp BCHHHHTTSCTTCEEEECS
T ss_pred CCHHHHHhcCCCCEEECCC
Confidence 6888888899999999986
No 277
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.0071 Score=66.86 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=58.0
Q ss_pred ccccccCCCEEEEEecChhHHHHHHHHhcC-CCEEEEECCCCCh-hH-HHHcCCee--c------CHHHHhccCCEEEEc
Q 006212 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGL-GMNVIAHDPYAPA-DK-ARAVGVEL--V------SFDQALATADFISLH 290 (656)
Q Consensus 222 ~~g~~l~gktvGIIGlG~IG~~vA~~lk~~-G~~Vi~~d~~~~~-~~-a~~~g~~~--~------~l~ell~~aDvV~l~ 290 (656)
+.+..+.+++|+|+|.|.+|+.+++.|... |.+|.++|++... +. +...++.. . ++.++++.+|+|+.|
T Consensus 16 ~~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 16 HIEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp -------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred ccccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 456788999999999999999999999976 7899999987422 11 11224321 1 355678899999999
Q ss_pred cCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 291 MPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 291 ~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
+|.... .-+ ....++.|..+++++
T Consensus 96 tp~~~~--~~v---~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFH--PNV---VKSAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGH--HHH---HHHHHHHTCEEEECS
T ss_pred Cchhhh--HHH---HHHHHhcCCEEEEee
Confidence 995421 111 112234566666664
No 278
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.95 E-value=0.11 Score=54.26 Aligned_cols=94 Identities=14% Similarity=0.129 Sum_probs=68.2
Q ss_pred ccC-CCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--C-hhH---H----HHcCCe--e-cCHHHHhccCCEEEEc
Q 006212 226 SLV-GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--P-ADK---A----RAVGVE--L-VSFDQALATADFISLH 290 (656)
Q Consensus 226 ~l~-gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~-~~~---a----~~~g~~--~-~~l~ell~~aDvV~l~ 290 (656)
.+. |++|+|||= +++..+++..+..+|++|....|.. + .+. + ++.|.. . .++++.+++||+|..-
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~ 221 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITD 221 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEec
Confidence 467 999999996 5788888888989999999988753 2 221 1 244543 2 4899999999999875
Q ss_pred c--CCCcc----------ccccccHHHHhcCCCCcEEEEcC
Q 006212 291 M--PLNPT----------TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 291 ~--Plt~~----------T~~li~~~~l~~mK~gailINva 319 (656)
. ....+ ...-++.+.++.+|++++|.-|.
T Consensus 222 ~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~l 262 (307)
T 3tpf_A 222 TWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCL 262 (307)
T ss_dssp CSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECS
T ss_pred CcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCC
Confidence 5 01110 12446888888899999999886
No 279
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=95.92 E-value=0.095 Score=55.07 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=67.3
Q ss_pred ccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC--C-hh---H----HHHcCC--ee-cCHHHHhccCCEEEEcc
Q 006212 226 SLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA--P-AD---K----ARAVGV--EL-VSFDQALATADFISLHM 291 (656)
Q Consensus 226 ~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~--~-~~---~----a~~~g~--~~-~~l~ell~~aDvV~l~~ 291 (656)
.+.|++|++||= +++..+++..+..+|++|....|.. + .+ . +.+.|. .. .++++.+++||+|..-.
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTDV 233 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEec
Confidence 478999999986 6788889988888999999988753 2 21 1 223454 33 38999999999998753
Q ss_pred CCC--c-----c-----ccccccHHHHhcCCCCcEEEEcC
Q 006212 292 PLN--P-----T-----TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Plt--~-----~-----T~~li~~~~l~~mK~gailINva 319 (656)
=.. . + ...-++.+.++.+|++++|.-|.
T Consensus 234 wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHcl 273 (323)
T 3gd5_A 234 WTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHCL 273 (323)
T ss_dssp CC---------CCHHHHTTCCBCHHHHHTSCTTCEEEECS
T ss_pred eecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECCC
Confidence 111 0 0 12346888888889999988885
No 280
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.92 E-value=0.015 Score=60.92 Aligned_cols=95 Identities=19% Similarity=0.178 Sum_probs=61.5
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC--ChhHH--HH---------cC--CeecCHHHHhccCCEEEEcc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA--PADKA--RA---------VG--VELVSFDQALATADFISLHM 291 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~--~~~~a--~~---------~g--~~~~~l~ell~~aDvV~l~~ 291 (656)
..++|+|||.|.+|..+|..+...|+ +|..+|... ..... .+ .. +...+-.+.+++||+|+++.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 46799999999999999999998888 999999872 11111 10 01 11122246789999999998
Q ss_pred CCCcccccc-----c--cH-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 292 PLNPTTSKI-----F--ND-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 292 Plt~~T~~l-----i--~~-------~~l~~mK~gailINvaRg~ivd 325 (656)
.. +...++ + |. +.+....|++++++++ ..+|
T Consensus 87 g~-p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs--NPvd 131 (315)
T 3tl2_A 87 GI-ARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT--NPVD 131 (315)
T ss_dssp SC-CCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHH
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC--ChHH
Confidence 52 222222 1 11 1222346889999997 3444
No 281
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=95.91 E-value=0.012 Score=59.63 Aligned_cols=80 Identities=15% Similarity=0.157 Sum_probs=54.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEE-ECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCccccccccHHHHh
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~-~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~ 307 (656)
.+|+|+|+|+||+.+++.+...+.++.+ +|+.... ..|+... ++++++ ++|+|+-+++. ..+. +.+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~-----~~~~ 72 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----TTPYQQYQHIADVK-GADVAIDFSNP-NLLF-----PLLD 72 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC------CCSCBCSCTTTCT-TCSEEEECSCH-HHHH-----HHHT
T ss_pred eEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----cCCCceeCCHHHHh-CCCEEEEeCCh-HHHH-----HHHH
Confidence 5799999999999999999876447665 7876532 3566544 788888 99998844431 1122 2333
Q ss_pred cCCCCcEEEEcCCC
Q 006212 308 KMKKGVRIVNVARG 321 (656)
Q Consensus 308 ~mK~gailINvaRg 321 (656)
++.|.-+|-...|
T Consensus 73 -l~~g~~vVigTTG 85 (243)
T 3qy9_A 73 -EDFHLPLVVATTG 85 (243)
T ss_dssp -SCCCCCEEECCCS
T ss_pred -HhcCCceEeCCCC
Confidence 6777766755444
No 282
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=95.86 E-value=0.017 Score=63.45 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=70.1
Q ss_pred CCCEEEEEecChh--HHHHHHHHhc----CCCEEEEECCCCCh-hHHHHc---------CCee-cCHHHHhccCCEEEEc
Q 006212 228 VGKTLAVMGFGKV--GSEVARRAKG----LGMNVIAHDPYAPA-DKARAV---------GVEL-VSFDQALATADFISLH 290 (656)
Q Consensus 228 ~gktvGIIGlG~I--G~~vA~~lk~----~G~~Vi~~d~~~~~-~~a~~~---------g~~~-~~l~ell~~aDvV~l~ 290 (656)
...+|+|||.|.+ |..++..+.. .| +|..||..... +..... .+.. .++++.++.||||+++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4569999999997 5788877653 36 99999987421 211111 1222 3799999999999999
Q ss_pred cCCC-----------ccccccccH------------------------HHHhcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 291 MPLN-----------PTTSKIFND------------------------ETFAKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 291 ~Plt-----------~~T~~li~~------------------------~~l~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
++.. |.-.++... +.+....|+++++|++---=+-..++.+.+..
T Consensus 83 irvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~~k~~p~ 162 (450)
T 3fef_A 83 ILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPG 162 (450)
T ss_dssp CCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHCTT
T ss_pred cccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHCCC
Confidence 9642 333333211 22333468999999975332334455444444
Q ss_pred CCeEE
Q 006212 336 GVVAQ 340 (656)
Q Consensus 336 g~i~g 340 (656)
.++.|
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 56666
No 283
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.84 E-value=0.01 Score=62.16 Aligned_cols=110 Identities=18% Similarity=0.185 Sum_probs=65.7
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCCh--hHHHHc--CC------eec-CHHHHhccCCEEEEccCCCc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPA--DKARAV--GV------ELV-SFDQALATADFISLHMPLNP 295 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~--~~a~~~--g~------~~~-~l~ell~~aDvV~l~~Plt~ 295 (656)
..+|+|||.|.+|.++|..+...|. +|..||..... ..+.++ +. ... +-.+.+++||+|+++++. +
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~-p 85 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA-N 85 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCC-C
Confidence 3589999999999999999987777 99999976421 112221 11 111 225669999999999984 3
Q ss_pred cccccc-------c----H---HHHhcCCCCcEEEEcCCCchhc--HHHHHHh--HhcCCeEEE
Q 006212 296 TTSKIF-------N----D---ETFAKMKKGVRIVNVARGGVID--EEALVRA--LDSGVVAQA 341 (656)
Q Consensus 296 ~T~~li-------~----~---~~l~~mK~gailINvaRg~ivd--e~aL~~a--L~~g~i~gA 341 (656)
...++- | . +.+....|++++++++ ..+| ...+.+. +...++.|.
T Consensus 86 ~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 86 RKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS--NPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS--SSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred CCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHcCCCHHHEecc
Confidence 322221 1 0 1222236899999973 4444 3333332 344577776
No 284
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=95.84 E-value=0.016 Score=59.87 Aligned_cols=102 Identities=19% Similarity=0.293 Sum_probs=64.5
Q ss_pred CCEEEEEec-ChhHHHHHHHHhcCCCEEE-EECCCCChhHHHHcCCeec-CHHHHhc--cCCEEEEccCCCccccccccH
Q 006212 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 229 gktvGIIGl-G~IG~~vA~~lk~~G~~Vi-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~Plt~~T~~li~~ 303 (656)
..+|+|+|+ |++|+.+++.++..|++++ .+||....+ ...|+... +++++.. ..|++++++|. +.....+ .
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~--~~~G~~vy~sl~el~~~~~~D~viI~tP~-~~~~~~~-~ 82 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT--THLGLPVFNTVREAVAATGATASVIYVPA-PFCKDSI-L 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCG-GGHHHHH-H
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc--eeCCeeccCCHHHHhhcCCCCEEEEecCH-HHHHHHH-H
Confidence 468999999 9999999999998899855 578753211 13466544 7999988 89999999993 2222232 2
Q ss_pred HHHhcCCCCcEEEEcCCCc-hhcHHHHHHhHhcC
Q 006212 304 ETFAKMKKGVRIVNVARGG-VIDEEALVRALDSG 336 (656)
Q Consensus 304 ~~l~~mK~gailINvaRg~-ivde~aL~~aL~~g 336 (656)
+.++ ..... +|..+.|- .-+.+.+.++.++.
T Consensus 83 ea~~-~Gi~~-iVi~t~G~~~~~~~~l~~~A~~~ 114 (288)
T 2nu8_A 83 EAID-AGIKL-IITITEGIPTLDMLTVKVKLDEA 114 (288)
T ss_dssp HHHH-TTCSE-EEECCCCCCHHHHHHHHHHHHHH
T ss_pred HHHH-CCCCE-EEEECCCCCHHHHHHHHHHHHHc
Confidence 2222 22232 34444442 22344676666553
No 285
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=95.83 E-value=0.012 Score=61.99 Aligned_cols=62 Identities=19% Similarity=0.307 Sum_probs=47.1
Q ss_pred EEEEEecChhHH-HHHHHHhcC-CCEEE-EECCCCChhHHHH---cCCee-cCHHHHhcc--CCEEEEccC
Q 006212 231 TLAVMGFGKVGS-EVARRAKGL-GMNVI-AHDPYAPADKARA---VGVEL-VSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 231 tvGIIGlG~IG~-~vA~~lk~~-G~~Vi-~~d~~~~~~~a~~---~g~~~-~~l~ell~~--aDvV~l~~P 292 (656)
+|||||+|.||+ ..+..++.. +++|. ++|+......+.+ .++.. .++++++.+ .|+|++|+|
T Consensus 4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (349)
T 3i23_A 4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTP 74 (349)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSC
T ss_pred EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCC
Confidence 799999999999 567767765 78876 5787743344444 35544 489999986 899999999
No 286
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.82 E-value=0.0085 Score=65.69 Aligned_cols=110 Identities=16% Similarity=0.186 Sum_probs=70.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-----hhHHHHcCCeec---CHHHHhcc-CCEEEEccCCCcc
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-----ADKARAVGVELV---SFDQALAT-ADFISLHMPLNPT 296 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-----~~~a~~~g~~~~---~l~ell~~-aDvV~l~~Plt~~ 296 (656)
++.||+|.|||+|..|.++|+.|+..|++|.++|.... .+..++.|+.+. ..++++.+ +|+|++.--..+.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~ 85 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYN 85 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTT
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCC
Confidence 56899999999999999999999999999999997531 133456788653 34456676 9999885332222
Q ss_pred c----------cccccH-HHHhcCCCCcEEEEcC-CCchhcHHHHHHhHhc
Q 006212 297 T----------SKIFND-ETFAKMKKGVRIVNVA-RGGVIDEEALVRALDS 335 (656)
Q Consensus 297 T----------~~li~~-~~l~~mK~gailINva-Rg~ivde~aL~~aL~~ 335 (656)
. ..++.+ +.+..+.+..+|-=+| .|+--...-+...|+.
T Consensus 86 ~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~ 136 (451)
T 3lk7_A 86 NPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNA 136 (451)
T ss_dssp SHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHh
Confidence 1 113343 2333333344443344 5776555555556654
No 287
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.79 E-value=0.056 Score=56.00 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=53.8
Q ss_pred ccCCCEEEEEec---ChhHHHHHHHHhcCCCEEEEECCCC--ChhHHHHcCCee-cCHHHHhccCCEEEEccCC
Q 006212 226 SLVGKTLAVMGF---GKVGSEVARRAKGLGMNVIAHDPYA--PADKARAVGVEL-VSFDQALATADFISLHMPL 293 (656)
Q Consensus 226 ~l~gktvGIIGl---G~IG~~vA~~lk~~G~~Vi~~d~~~--~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl 293 (656)
.+.|++|+++|= +++..+++..+..+|++|....|.. +.. ..+.|+.. .++++.+++||+|.. +-.
T Consensus 143 ~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~p~~-~~~~g~~~~~d~~eav~~aDvvy~-~~~ 214 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLIPRD-VEVFKVDVFDDVDKGIDWADVVIW-LRL 214 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGSCTT-GGGGCEEEESSHHHHHHHCSEEEE-CCC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhCCch-HHHCCCEEEcCHHHHhCCCCEEEE-eCc
Confidence 478999999997 8999999999999999999988753 222 23457654 489999999999998 664
No 288
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.79 E-value=0.0087 Score=63.15 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=46.3
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEE-EECCCCChhHHHHcCCe-ecCHHHHhcc--CCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVI-AHDPYAPADKARAVGVE-LVSFDQALAT--ADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi-~~d~~~~~~~a~~~g~~-~~~l~ell~~--aDvV~l~~Pl 293 (656)
.+|||||+|.||+. .+..++.. +++|. ++|+......+...++. +.++++++.+ .|+|++|+|.
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 77 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPN 77 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCCh
Confidence 47999999999997 78888766 78876 47876422111112343 3489999976 9999999993
No 289
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=95.73 E-value=0.14 Score=56.03 Aligned_cols=95 Identities=20% Similarity=0.300 Sum_probs=66.0
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE--------ECCCC-ChhHHH----HcC-------CeecCHHHHhc-
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADKAR----AVG-------VELVSFDQALA- 282 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~--------~d~~~-~~~~a~----~~g-------~~~~~l~ell~- 282 (656)
|.++.|+||.|.|+|++|+.+|+.|...|.+|++ |||.- ..+... +.| .+.++.++++.
T Consensus 230 g~~l~g~~vaVqGfGnVG~~~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~i~~~ei~~~ 309 (440)
T 3aog_A 230 GLQVEGARVAIQGFGNVGNAAARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEPLPAADFWGL 309 (440)
T ss_dssp TCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEECCHHHHTTC
T ss_pred CCCccCCEEEEeccCHHHHHHHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceEcCchhhhcC
Confidence 5679999999999999999999999999999984 34432 222211 122 24456677664
Q ss_pred cCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 283 TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 283 ~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
+||+++-|.+. +.++.+....++ -.+|+-.+-+.+-
T Consensus 310 ~~DIlvPcA~~-----n~i~~~na~~l~-ak~VvEgAN~p~t 345 (440)
T 3aog_A 310 PVEFLVPAALE-----KQITEQNAWRIR-ARIVAEGANGPTT 345 (440)
T ss_dssp CCSEEEECSSS-----SCBCTTTGGGCC-CSEEECCSSSCBC
T ss_pred CCcEEEecCCc-----CccchhhHHHcC-CcEEEecCccccC
Confidence 79999998763 345666666663 4566777777764
No 290
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.73 E-value=0.015 Score=61.44 Aligned_cols=89 Identities=22% Similarity=0.341 Sum_probs=65.5
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee-c------CHHHHh-ccCCEEEEccCCC-ccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-V------SFDQAL-ATADFISLHMPLN-PTT 297 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~-~------~l~ell-~~aDvV~l~~Plt-~~T 297 (656)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|... + ++.+.+ ...|+|+-+++.+ +.+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~ 258 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 258 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH
Confidence 48899999999999999999999999999998765 566777888743 2 222222 3689999988742 111
Q ss_pred cccccHHHHhcCCCCcEEEEcCC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINvaR 320 (656)
+ ...+..|+++..++.++.
T Consensus 259 ---~-~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 259 ---F-NIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ---T-TTGGGGEEEEEEEEECCC
T ss_pred ---H-HHHHHHhcCCCEEEEecC
Confidence 1 344566888888888874
No 291
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.73 E-value=0.019 Score=61.27 Aligned_cols=85 Identities=18% Similarity=0.278 Sum_probs=55.1
Q ss_pred CCEEEEEe-cChhHHHHHHHHhcCC-CEEEEECCCCCh--hHHHH----cC-----CeecCHHHHhccCCEEEEccCCCc
Q 006212 229 GKTLAVMG-FGKVGSEVARRAKGLG-MNVIAHDPYAPA--DKARA----VG-----VELVSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 229 gktvGIIG-lG~IG~~vA~~lk~~G-~~Vi~~d~~~~~--~~a~~----~g-----~~~~~l~ell~~aDvV~l~~Plt~ 295 (656)
..+|||+| +|.||+.+++.|.... +++.+....... ..... .+ +...+ ++.+..+|+|++|+|...
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~ 94 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGT 94 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTT
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchh
Confidence 35899999 9999999999998764 687776432211 11111 11 11223 556678999999999442
Q ss_pred cccccccHHHHhcCCCCcEEEEcCC
Q 006212 296 TTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 296 ~T~~li~~~~l~~mK~gailINvaR 320 (656)
..+.....+.|+.+||.+.
T Consensus 95 ------s~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 95 ------TQEIIKELPTALKIVDLSA 113 (359)
T ss_dssp ------HHHHHHTSCTTCEEEECSS
T ss_pred ------HHHHHHHHhCCCEEEECCc
Confidence 2333333377999999974
No 292
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.71 E-value=0.023 Score=59.36 Aligned_cols=63 Identities=14% Similarity=0.207 Sum_probs=47.9
Q ss_pred CEEEEEecChhHH-HHHHHHhcCCCEEE-EECCCCC--hhHHHHc-CCe-ecCHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGFGKVGS-EVARRAKGLGMNVI-AHDPYAP--ADKARAV-GVE-LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~-~vA~~lk~~G~~Vi-~~d~~~~--~~~a~~~-g~~-~~~l~ell~--~aDvV~l~~P 292 (656)
.+|||||+|.+|. .++..++..+++|. ++|++.. ...+... ++. +.+++++++ +.|+|++|+|
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 75 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVI 75 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSC
T ss_pred cEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCC
Confidence 4799999999996 67777776689975 5788752 3344555 444 358999997 6999999999
No 293
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.70 E-value=0.0081 Score=65.55 Aligned_cols=64 Identities=20% Similarity=0.240 Sum_probs=48.7
Q ss_pred CEEEEEecChhHH-HHHHHHhcC-CCEEE-EECCCCCh--hHHHHcCCe------ecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGS-EVARRAKGL-GMNVI-AHDPYAPA--DKARAVGVE------LVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~-~vA~~lk~~-G~~Vi-~~d~~~~~--~~a~~~g~~------~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+ .+++.++.. ++++. ++|+.... ..+...|+. +.++++++. +.|+|++|+|.
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~ 160 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPN 160 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCc
Confidence 4799999999997 899988865 67765 67887522 234455663 348999987 79999999993
No 294
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.67 E-value=0.017 Score=64.03 Aligned_cols=98 Identities=21% Similarity=0.347 Sum_probs=69.6
Q ss_pred ccccCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee-cCHHHHhccCCEEEEccC
Q 006212 224 GVSLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 224 g~~l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~P 292 (656)
+..+.|++|+|+|+-- =...+++.|+..|.+|.+|||+... . ..+.+ .++++.++.||.|+++++
T Consensus 348 ~~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~--~--~~~~~~~~~~~~~~~ad~vvi~t~ 423 (478)
T 3g79_A 348 GKKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN--Y--PGVEISDNLEEVVRNADAIVVLAG 423 (478)
T ss_dssp TCCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC--B--TTBCEESCHHHHHTTCSEEEECSC
T ss_pred ccCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc--c--cCcceecCHHHHHhcCCEEEEecC
Confidence 4578999999999852 3578999999999999999998752 1 12233 489999999999999987
Q ss_pred CCccccccccHH-HHhcCC-CCcEEEEcCCCchhcHHHH
Q 006212 293 LNPTTSKIFNDE-TFAKMK-KGVRIVNVARGGVIDEEAL 329 (656)
Q Consensus 293 lt~~T~~li~~~-~l~~mK-~gailINvaRg~ivde~aL 329 (656)
-++-+. ++-+ ....|+ +..+|+|+ |+ +.|.+.+
T Consensus 424 -~~~f~~-~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 424 -HSAYSS-LKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp -CHHHHS-CCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred -CHHHHh-hhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 333332 3433 334577 47899995 54 3465544
No 295
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=95.67 E-value=0.13 Score=54.64 Aligned_cols=96 Identities=19% Similarity=0.227 Sum_probs=65.9
Q ss_pred ccccCCCEEEEEecC-hhHHHHHHHHhcCCCEEEEECCCC---Chh---HHHHc------C--Cee-cCHHHHhccCCEE
Q 006212 224 GVSLVGKTLAVMGFG-KVGSEVARRAKGLGMNVIAHDPYA---PAD---KARAV------G--VEL-VSFDQALATADFI 287 (656)
Q Consensus 224 g~~l~gktvGIIGlG-~IG~~vA~~lk~~G~~Vi~~d~~~---~~~---~a~~~------g--~~~-~~l~ell~~aDvV 287 (656)
...|.|++|+|||=+ ++..+++..+..+|++|.+..|.. +.+ .+++. | +.. .++++.+++||+|
T Consensus 183 ~~~l~glkva~vGD~~nva~Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVv 262 (353)
T 3sds_A 183 SLGLEGLKIAWVGDANNVLFDLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVI 262 (353)
T ss_dssp CCSCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEE
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEE
Confidence 345899999999976 578888888889999999988753 222 12221 3 233 4899999999999
Q ss_pred EEcc--CCCcc----------ccccccHHHHhc--CCCCcEEEEcC
Q 006212 288 SLHM--PLNPT----------TSKIFNDETFAK--MKKGVRIVNVA 319 (656)
Q Consensus 288 ~l~~--Plt~~----------T~~li~~~~l~~--mK~gailINva 319 (656)
..-+ +...+ ....++.+.++. +|++++|.-|.
T Consensus 263 ytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL 308 (353)
T 3sds_A 263 VTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL 308 (353)
T ss_dssp EECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS
T ss_pred EeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC
Confidence 8743 22211 113467777777 78888888875
No 296
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.66 E-value=0.029 Score=58.22 Aligned_cols=93 Identities=17% Similarity=0.081 Sum_probs=62.5
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhH--HH---H----c--CC--eec-CHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--AR---A----V--GV--ELV-SFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~--a~---~----~--g~--~~~-~l~ell~~aDvV~l~~Pl 293 (656)
++|+|||.|.+|.++|..+...|. +|..||....... +. + . .. ... + .+.+++||+|+++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 479999999999999999987776 9999998652111 11 1 1 11 222 5 7889999999999873
Q ss_pred Ccccccc-----c--cH-------HHHhcCCCCcEEEEcCCCchhcH
Q 006212 294 NPTTSKI-----F--ND-------ETFAKMKKGVRIVNVARGGVIDE 326 (656)
Q Consensus 294 t~~T~~l-----i--~~-------~~l~~mK~gailINvaRg~ivde 326 (656)
+...++ + |. +.+....|++++++++ ..+|.
T Consensus 80 -~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~ 123 (294)
T 1oju_A 80 -ARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDV 123 (294)
T ss_dssp -CCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHH
T ss_pred -CCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchH
Confidence 322222 1 11 1234467899999997 55553
No 297
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.64 E-value=0.0075 Score=63.94 Aligned_cols=91 Identities=11% Similarity=0.068 Sum_probs=62.9
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC----ChhHHHHcCCeecC---HHHHh----ccCCEEEEccCCC
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA----PADKARAVGVELVS---FDQAL----ATADFISLHMPLN 294 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~----~~~~a~~~g~~~~~---l~ell----~~aDvV~l~~Plt 294 (656)
.+.|++|.|+|.|.||..+++.++.+|.+|++.++.. ..+.++++|+..++ +.+.+ ...|+|+-++...
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 257 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGAD 257 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCCh
Confidence 5679999999999999999999999999999998764 23455667764431 11111 3478888777632
Q ss_pred ccccccccHHHHhcCCCCcEEEEcCC
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINvaR 320 (656)
... + ...+..|+++..+++++-
T Consensus 258 ~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 258 VNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp THH---H-HHHGGGEEEEEEEEECSC
T ss_pred HHH---H-HHHHHHHhcCCEEEEEec
Confidence 211 0 345566777778887763
No 298
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.63 E-value=0.033 Score=61.62 Aligned_cols=101 Identities=22% Similarity=0.266 Sum_probs=69.8
Q ss_pred ccccCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHc------------CCeec-CHHHH
Q 006212 224 GVSLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAV------------GVELV-SFDQA 280 (656)
Q Consensus 224 g~~l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~------------g~~~~-~l~el 280 (656)
+..+.|++|+|+|+-- =...+++.|...|.+|.+|||....+..... .+.++ ++++.
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQA 402 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHH
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHH
Confidence 4578999999999853 4567999999999999999998633211212 24444 68899
Q ss_pred hccCCEEEEccCCCccccccccHHHH-hcCCCCcEEEEcCCCchhcHHHH
Q 006212 281 LATADFISLHMPLNPTTSKIFNDETF-AKMKKGVRIVNVARGGVIDEEAL 329 (656)
Q Consensus 281 l~~aDvV~l~~Plt~~T~~li~~~~l-~~mK~gailINvaRg~ivde~aL 329 (656)
++.||+|++++.-. +-+. ++-+.+ ..|+ ..+|+|+ |+ +.+.+.+
T Consensus 403 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 447 (478)
T 2y0c_A 403 ARDADALVIVTEWK-IFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPETM 447 (478)
T ss_dssp TTTCSEEEECSCCG-GGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHHHH
T ss_pred HhCCCEEEEecCCh-Hhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHHHH
Confidence 99999999999843 3332 344444 4455 4789997 33 4455443
No 299
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.63 E-value=0.01 Score=62.85 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=47.2
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEEE-ECCCCChhHHHHc-CCee-cCHHHHhcc--CCEEEEccC
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVIA-HDPYAPADKARAV-GVEL-VSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi~-~d~~~~~~~a~~~-g~~~-~~l~ell~~--aDvV~l~~P 292 (656)
.+|||||+|.||+. .+..++.. +++|.+ +|+.... .+.+. ++.. .++++++.+ .|+|++|+|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~-~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKEL-SKERYPQASIVRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCG-GGTTCTTSEEESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH-HHHhCCCCceECCHHHHhcCCCCCEEEEeCC
Confidence 47999999999997 77777765 788864 6877533 33334 4443 489999986 999999999
No 300
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.61 E-value=0.011 Score=62.31 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=59.6
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhH--HHH--cC--------Cee-cCHHHHhccCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARA--VG--------VEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~--a~~--~g--------~~~-~~l~ell~~aDvV~l~~P 292 (656)
..++|+|||.|.||..+|..+...|+ +|..+|....... +.+ .+ +.. .+.++ +++||+|+++..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 56899999999999999999987776 9999998642111 110 01 111 25665 999999999876
Q ss_pred CCccccc-----cc--cH-------HHHhcCCCCcEEEEcC
Q 006212 293 LNPTTSK-----IF--ND-------ETFAKMKKGVRIVNVA 319 (656)
Q Consensus 293 lt~~T~~-----li--~~-------~~l~~mK~gailINva 319 (656)
. +...+ ++ |. +.+....|++++++++
T Consensus 99 ~-p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 99 A-RQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp C-CCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred C-CCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 3 22222 22 11 1233457899999997
No 301
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.59 E-value=0.031 Score=58.81 Aligned_cols=91 Identities=15% Similarity=0.252 Sum_probs=59.2
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhH--H---HH------cCCe--e-cCHHHHhccCCEEEEcc
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADK--A---RA------VGVE--L-VSFDQALATADFISLHM 291 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~--a---~~------~g~~--~-~~l~ell~~aDvV~l~~ 291 (656)
...++|+|||.|.+|..+|..+...|+ +|..+|....... + .+ .... . .+. +.+++||+|+++.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 346799999999999999999987777 9999998763211 1 11 1222 2 244 7899999999998
Q ss_pred CCCcccccc-----c--cH-------HHHhcCCCCcEEEEcC
Q 006212 292 PLNPTTSKI-----F--ND-------ETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Plt~~T~~l-----i--~~-------~~l~~mK~gailINva 319 (656)
+. +...++ + |. ..+....|++++++++
T Consensus 84 g~-p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 84 GV-PRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp SC-CCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred Cc-CCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 63 322222 1 11 1222245788999987
No 302
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.59 E-value=0.032 Score=60.99 Aligned_cols=84 Identities=20% Similarity=0.264 Sum_probs=63.7
Q ss_pred ccCCCEEEEEecCh----------hHHHHHHHHhcC-CCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCC
Q 006212 226 SLVGKTLAVMGFGK----------VGSEVARRAKGL-GMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLN 294 (656)
Q Consensus 226 ~l~gktvGIIGlG~----------IG~~vA~~lk~~-G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt 294 (656)
.+.|++|+|+|+-- -...+++.|+.. |.+|.+|||+...+ ....++++.++.||.|+++++-
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~------~~~~~~~~~~~~ad~vvi~t~~- 384 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD------FVEHDMSHAVKDASLVLILSDH- 384 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT------TBCSTTHHHHTTCSEEEECSCC-
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc------cccCCHHHHHhCCCEEEEecCC-
Confidence 47899999999852 367899999998 99999999987432 2335789999999999999983
Q ss_pred ccccccccHHHHhcCCCCcEEEEc
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINv 318 (656)
++-+. ++-+.+..|+ +.+|+|+
T Consensus 385 ~~f~~-~d~~~~~~~~-~~~i~D~ 406 (431)
T 3ojo_A 385 SEFKN-LSDSHFDKMK-HKVIFDT 406 (431)
T ss_dssp GGGTS-CCGGGGTTCS-SCEEEES
T ss_pred HHHhc-cCHHHHHhCC-CCEEEEC
Confidence 33333 3444456676 6789996
No 303
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.58 E-value=0.014 Score=62.39 Aligned_cols=64 Identities=25% Similarity=0.407 Sum_probs=46.1
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcC--C---eecC---HHHHhccCCEEEE
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVG--V---ELVS---FDQALATADFISL 289 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g--~---~~~~---l~ell~~aDvV~l 289 (656)
..+.||+|+|+|.|.+|+.+++.++.+|++|+++|++.... +.+.. . .+.+ +.++++++|+|+.
T Consensus 8 ~~~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p-~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 8 KLKFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP-CRYVAHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT-TGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh-hhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence 34679999999999999999999999999999999875211 11111 1 1112 5567788898744
No 304
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.56 E-value=0.01 Score=63.56 Aligned_cols=63 Identities=14% Similarity=0.300 Sum_probs=49.6
Q ss_pred CEEEEEecC-hhHHHHHHHHhcC-CCEEEE-ECCCCC--hhHHHHcCCee-cCHHHHhcc--CCEEEEccC
Q 006212 230 KTLAVMGFG-KVGSEVARRAKGL-GMNVIA-HDPYAP--ADKARAVGVEL-VSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG-~IG~~vA~~lk~~-G~~Vi~-~d~~~~--~~~a~~~g~~~-~~l~ell~~--aDvV~l~~P 292 (656)
.+|||||+| .+|...+..++.. ++++.+ +|+... ...+.+.|+.. .++++++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCC
Confidence 379999999 9999999998865 678764 788752 23345567754 489999975 999999999
No 305
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.56 E-value=0.022 Score=59.21 Aligned_cols=63 Identities=19% Similarity=0.308 Sum_probs=47.8
Q ss_pred CEEEEEec-ChhHHHHHHHHhcCCCEEEE-ECCCCChhHH-HHc-CCe-ecCHHHHh----------ccCCEEEEccC
Q 006212 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIA-HDPYAPADKA-RAV-GVE-LVSFDQAL----------ATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGl-G~IG~~vA~~lk~~G~~Vi~-~d~~~~~~~a-~~~-g~~-~~~l~ell----------~~aDvV~l~~P 292 (656)
.++||||+ |.||+..++.++..+.++.+ +|++.....+ ... +.. +.++++++ .+.|+|++|+|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 58999999 78999999999988888765 7887643222 222 333 34888887 67999999999
No 306
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.54 E-value=0.01 Score=63.88 Aligned_cols=62 Identities=18% Similarity=0.309 Sum_probs=47.6
Q ss_pred EEEEEecChhHHHHHHHHhcC---------CCEEEE-ECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccC
Q 006212 231 TLAVMGFGKVGSEVARRAKGL---------GMNVIA-HDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~---------G~~Vi~-~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 292 (656)
+|||||+|.||+..++.++.. +.+|.+ +|++.. ...+++.|+. +.+++++++ +.|+|++|+|
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp 105 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSP 105 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSC
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCC
Confidence 799999999999988887743 457665 688752 2345667774 358999996 5899999999
No 307
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=95.52 E-value=0.026 Score=58.80 Aligned_cols=62 Identities=19% Similarity=0.247 Sum_probs=46.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhHH--HH--c-------C--Cee-cCHHHHhccCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADKA--RA--V-------G--VEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~a--~~--~-------g--~~~-~~l~ell~~aDvV~l~~P 292 (656)
++|+|||.|.+|..+|..+...|+ +|..+|........ .+ . . +.. .+. +.+++||+|+++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSG 79 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCC
Confidence 589999999999999999988886 89999976532111 11 1 1 122 356 67899999999986
No 308
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.52 E-value=0.016 Score=60.63 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=67.3
Q ss_pred CCEEEEEecChhHHHHHHHHhcCC--CEEEEECCCCCh-h-HHHH--c-------CCee-cCHHHHhccCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLG--MNVIAHDPYAPA-D-KARA--V-------GVEL-VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G--~~Vi~~d~~~~~-~-~a~~--~-------g~~~-~~l~ell~~aDvV~l~~Plt 294 (656)
..+|+|||.|.+|.++|..+...| -+|..||..... + .+.+ . .+.. .+..+.+++||+|+++.+..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~ 85 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAA 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCC
Confidence 468999999999999999988656 489999976311 1 1111 0 1111 14467799999999999743
Q ss_pred ccccccc-------cH-------HHHhcCCCCcEEEEcCCCchhc--HHHHHHh--HhcCCeEEE
Q 006212 295 PTTSKIF-------ND-------ETFAKMKKGVRIVNVARGGVID--EEALVRA--LDSGVVAQA 341 (656)
Q Consensus 295 ~~T~~li-------~~-------~~l~~mK~gailINvaRg~ivd--e~aL~~a--L~~g~i~gA 341 (656)
...++- |. +.+....|++++++++ ..+| ...+.+. +...++.|.
T Consensus 86 -~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~t~~~~k~~~~p~~rviG~ 147 (317)
T 3d0o_A 86 -QKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT--NPVDILAYATWKFSGLPKERVIGS 147 (317)
T ss_dssp -CCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS--SSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred -CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec--CcHHHHHHHHHHHhCCCHHHEEec
Confidence 222221 11 1233347899999975 4444 3333332 333466665
No 309
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.52 E-value=0.26 Score=53.50 Aligned_cols=96 Identities=24% Similarity=0.309 Sum_probs=65.1
Q ss_pred cccccCCCEEEEEecChhHHHHHHHHhc-CCCEEEE--------ECCCC-ChhHHH----HcC-------CeecCHHHHh
Q 006212 223 VGVSLVGKTLAVMGFGKVGSEVARRAKG-LGMNVIA--------HDPYA-PADKAR----AVG-------VELVSFDQAL 281 (656)
Q Consensus 223 ~g~~l~gktvGIIGlG~IG~~vA~~lk~-~G~~Vi~--------~d~~~-~~~~a~----~~g-------~~~~~l~ell 281 (656)
.|.++.|+++.|.|+|++|+..|+.|.. .|.+|++ |||.- ..+... +.| .+.++.++++
T Consensus 203 ~g~~l~g~~vaVqG~GnVG~~~a~~L~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~l~~y~~a~~~~~~eil 282 (415)
T 2tmg_A 203 LGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEELL 282 (415)
T ss_dssp TTCCTTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHSSCSTTCSSSEEECHHHHT
T ss_pred cCCCcCCCEEEEECCcHHHHHHHHHHHHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhhCCcccCCCceEcCchhhh
Confidence 3568999999999999999999999998 9999984 34421 222111 112 2344566765
Q ss_pred c-cCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 282 A-TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 282 ~-~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
. +||+++-|.+. +.++.+....++ ..+|+-.+-+.+-
T Consensus 283 ~~~~DIliP~A~~-----n~i~~~~a~~l~-ak~V~EgAN~p~t 320 (415)
T 2tmg_A 283 ELDVDILVPAALE-----GAIHAGNAERIK-AKAVVEGANGPTT 320 (415)
T ss_dssp TCSCSEEEECSST-----TSBCHHHHTTCC-CSEEECCSSSCBC
T ss_pred cCCCcEEEecCCc-----CccCcccHHHcC-CeEEEeCCCcccC
Confidence 4 78998888753 346777777673 4466666666653
No 310
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.47 E-value=0.04 Score=58.36 Aligned_cols=87 Identities=28% Similarity=0.287 Sum_probs=61.8
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-cC-------HHHHhc-----cCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 292 (656)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58899999999999999999999999 899998765 456677788642 12 333222 3688877775
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006212 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~g-ailINva 319 (656)
..+ .-...+..++++ ..++.++
T Consensus 272 ~~~-----~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 272 NVG-----VMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECS
T ss_pred CHH-----HHHHHHHHhhcCCcEEEEEc
Confidence 211 123456667777 7777776
No 311
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.47 E-value=0.009 Score=59.34 Aligned_cols=64 Identities=17% Similarity=0.271 Sum_probs=41.2
Q ss_pred CEEEEEecChhHHHHHHH--HhcCCCEEEE-ECCCCChhHHHHcCCe---ecCHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARR--AKGLGMNVIA-HDPYAPADKARAVGVE---LVSFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~--lk~~G~~Vi~-~d~~~~~~~a~~~g~~---~~~l~ell~~aDvV~l~~Pl 293 (656)
++++|||.|.+|+.+|+. ....|+++.+ +|..+......-.|+. ..++++++++.|++++|+|.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs 155 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPA 155 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCc
Confidence 469999999999999994 3456888876 5655422111112332 23788998777999999993
No 312
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.46 E-value=0.024 Score=59.11 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=47.4
Q ss_pred CEEEEEec-ChhHHHHHHHHhcCCCEEEE-ECCCCChhHH-HHc-CCe-ecCHHHHh-----------ccCCEEEEccC
Q 006212 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIA-HDPYAPADKA-RAV-GVE-LVSFDQAL-----------ATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGl-G~IG~~vA~~lk~~G~~Vi~-~d~~~~~~~a-~~~-g~~-~~~l~ell-----------~~aDvV~l~~P 292 (656)
.++||||+ |.||...++.++..+.++.+ +|++.....+ ... +.. +.++++++ .+.|+|++|+|
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP 82 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSP 82 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSC
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCC
Confidence 58999999 79999999999988888765 6877643222 222 333 34788887 57999999999
No 313
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.46 E-value=0.039 Score=56.55 Aligned_cols=96 Identities=21% Similarity=0.324 Sum_probs=64.7
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCCCh--hHHHHcC-----CeecCHHHHhccCCEEEEccCCCc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPA--DKARAVG-----VELVSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~--~~a~~~g-----~~~~~l~ell~~aDvV~l~~Plt~ 295 (656)
|.++.|+++.|+|.|-.+++++..|...|. +|..++|.... +.+...+ .......+.++++|+|+.++|..-
T Consensus 120 g~~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm 199 (269)
T 3tum_A 120 GFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGM 199 (269)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTC
T ss_pred CCCcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCcccc
Confidence 557789999999999999999999998885 88999987422 1122111 122223344678999999999643
Q ss_pred ccc--ccccHHHHhcCCCCcEEEEcC
Q 006212 296 TTS--KIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 296 ~T~--~li~~~~l~~mK~gailINva 319 (656)
... .-+....+..++++.++.|+-
T Consensus 200 ~~~~~~p~~~~~~~~l~~~~~v~D~v 225 (269)
T 3tum_A 200 GTRAELPLSAALLATLQPDTLVADVV 225 (269)
T ss_dssp STTCCCSSCHHHHHTCCTTSEEEECC
T ss_pred CCCCCCCCChHHHhccCCCcEEEEEc
Confidence 211 124555666677777777764
No 314
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.42 E-value=0.016 Score=60.31 Aligned_cols=62 Identities=16% Similarity=0.258 Sum_probs=44.7
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCC-hhHHHH---c---CCee-cCHHHHhccCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAP-ADKARA---V---GVEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~-~~~a~~---~---g~~~-~~l~ell~~aDvV~l~~P 292 (656)
++|+|||.|.+|..+|..+...|+ +|..+|.... ...+.+ . .+.. .++ +.+++||+|+++..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag 86 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVN 86 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCC
Confidence 789999999999999999886677 9999998652 111111 1 1222 366 66899999999974
No 315
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.41 E-value=0.018 Score=61.17 Aligned_cols=88 Identities=24% Similarity=0.336 Sum_probs=63.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec----C---HHHHhccCCEEEEccCCCccccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV----S---FDQALATADFISLHMPLNPTTSK 299 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~----~---l~ell~~aDvV~l~~Plt~~T~~ 299 (656)
.|.+|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|+..+ + ++++....|+|+-++....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~---- 269 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPH---- 269 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHH----
Confidence 48899999999999999999999999999998765 4566777786422 1 1223345788888776321
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 006212 300 IFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaR 320 (656)
.-...+..|+++..++.++.
T Consensus 270 -~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 270 -NLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -CHHHHHTTEEEEEEEEECCC
T ss_pred -HHHHHHHHhccCCEEEEecc
Confidence 12345666788888888763
No 316
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.41 E-value=0.013 Score=61.49 Aligned_cols=109 Identities=14% Similarity=0.074 Sum_probs=65.4
Q ss_pred CEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChh--HHHHc--------CCee-cCHHHHhccCCEEEEccCCCcc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPAD--KARAV--------GVEL-VSFDQALATADFISLHMPLNPT 296 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~--~a~~~--------g~~~-~~l~ell~~aDvV~l~~Plt~~ 296 (656)
.+|+|||.|.+|.+++..+...++ ++..||...... .+.++ .+.. .+..+.+++||+|+++.+...
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~- 84 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ- 84 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC---
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC-
Confidence 689999999999999999886565 899999853211 11111 1111 145677999999999987432
Q ss_pred cccc-------ccH-------HHHhcCCCCcEEEEcCCCchhc--HHHHHHh--HhcCCeEEE
Q 006212 297 TSKI-------FND-------ETFAKMKKGVRIVNVARGGVID--EEALVRA--LDSGVVAQA 341 (656)
Q Consensus 297 T~~l-------i~~-------~~l~~mK~gailINvaRg~ivd--e~aL~~a--L~~g~i~gA 341 (656)
..++ .|. +.+....|+++++++ +..+| ...+.+. +...++.|.
T Consensus 85 ~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t~~~~k~s~~p~~rviG~ 145 (318)
T 1ez4_A 85 KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA--ANPVDILTYATWKFSGFPKERVIGS 145 (318)
T ss_dssp --------CHHHHHHHHHHHHHHHHHTTCCSEEEEC--SSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe--CCcHHHHHHHHHHHcCCCHHHEEec
Confidence 2221 111 122334789999998 44455 3333332 333466665
No 317
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.39 E-value=0.028 Score=55.09 Aligned_cols=71 Identities=23% Similarity=0.318 Sum_probs=49.4
Q ss_pred ccccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCC-eec--C----HHHHhccCCEEEEccCCC
Q 006212 224 GVSLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGV-ELV--S----FDQALATADFISLHMPLN 294 (656)
Q Consensus 224 g~~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~-~~~--~----l~ell~~aDvV~l~~Plt 294 (656)
-..+.||+|.|.|. |.||+.+++.|...|++|++.++... .......++ ..+ | +.+.+..+|+|+.+....
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 35689999999997 99999999999999999999988753 233333455 432 2 456677888887776643
No 318
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.39 E-value=0.018 Score=61.03 Aligned_cols=63 Identities=13% Similarity=0.249 Sum_probs=47.3
Q ss_pred CEEEEEecChhHHH-HHHHHhcC-CCEEEE-ECCCCChhHHHHc-CCee-cCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSE-VARRAKGL-GMNVIA-HDPYAPADKARAV-GVEL-VSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~~lk~~-G~~Vi~-~d~~~~~~~a~~~-g~~~-~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+. .+..++.. +++|.+ +|+... ..+... ++.. .++++++. +.|+|++|+|.
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~-~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 75 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTE-EVKRDFPDAEVVHELEEITNDPAIELVIVTTPS 75 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHH-HHHHHCTTSEEESSTHHHHTCTTCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHH-HHHhhCCCCceECCHHHHhcCCCCCEEEEcCCc
Confidence 47999999999997 67777766 788764 687642 233344 4443 48999998 78999999993
No 319
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.37 E-value=0.12 Score=56.21 Aligned_cols=107 Identities=21% Similarity=0.316 Sum_probs=70.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE--------ECCCC-ChhHHHHc----C------CeecCHHHHh-cc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADKARAV----G------VELVSFDQAL-AT 283 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~--------~d~~~-~~~~a~~~----g------~~~~~l~ell-~~ 283 (656)
|.++.|+||.|-|+|++|+..|+.|...|.+|++ |||.- +.+...+. | .+.++-++++ .+
T Consensus 216 g~~l~g~~vaVqG~GnVG~~aa~~l~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~~~a~~~~~~~i~~~~ 295 (424)
T 3k92_A 216 GIKLQNARIIIQGFGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTNLFTDVITNEELLEKD 295 (424)
T ss_dssp TCCGGGCEEEEECCSHHHHHHHHHHHHHTCEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGGGCSCCBCHHHHHHSC
T ss_pred CCCcccCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCCCCcEEecCccceecc
Confidence 5679999999999999999999999999999874 33432 23222221 2 2345666655 47
Q ss_pred CCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 284 aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
||+++-|.. .+.|+.+....++ -.+|+-.+-+.+- .++ .+.|.+..|
T Consensus 296 ~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~t-~eA-~~iL~~rGI 342 (424)
T 3k92_A 296 CDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPTT-IDA-TKILNERGV 342 (424)
T ss_dssp CSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHTTC
T ss_pred ccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCCC-HHH-HHHHHHCCC
Confidence 999988875 3457777666673 4566677777753 333 234555444
No 320
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.36 E-value=0.022 Score=60.05 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=46.2
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEE-ECCCCC--hhHHHHcCCe------------------e-cCHHHHhccCCEE
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAP--ADKARAVGVE------------------L-VSFDQALATADFI 287 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~-~d~~~~--~~~a~~~g~~------------------~-~~l~ell~~aDvV 287 (656)
+|||+|+|.||+.+++.+... ++++.+ +|+... ...++..|+. . .++++++.++|+|
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV 83 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEE
Confidence 799999999999999999865 578765 455432 1223334421 1 2688888899999
Q ss_pred EEccCCC
Q 006212 288 SLHMPLN 294 (656)
Q Consensus 288 ~l~~Plt 294 (656)
+.|+|..
T Consensus 84 ~~aTp~~ 90 (334)
T 2czc_A 84 VDATPGG 90 (334)
T ss_dssp EECCSTT
T ss_pred EECCCcc
Confidence 9999943
No 321
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.36 E-value=0.043 Score=58.12 Aligned_cols=87 Identities=28% Similarity=0.269 Sum_probs=60.0
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-cC-------HHHHhc-----cCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 292 (656)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 58899999999999999999999999 899999765 456677777642 12 222222 3677777765
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006212 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~g-ailINva 319 (656)
..+ + -...+..++++ ..++.++
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 271 RLD-T----MVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CHH-H----HHHHHHHBCTTTCEEEECS
T ss_pred CHH-H----HHHHHHHhhcCCcEEEEec
Confidence 211 1 13445567777 6777665
No 322
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.34 E-value=0.056 Score=59.80 Aligned_cols=102 Identities=17% Similarity=0.180 Sum_probs=70.6
Q ss_pred ccccCCCEEEEEecC----------hhHHHHHHHHhcCCCEEEEECCCCChhHH----HH-c-------CCee-cCHHHH
Q 006212 224 GVSLVGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKA----RA-V-------GVEL-VSFDQA 280 (656)
Q Consensus 224 g~~l~gktvGIIGlG----------~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a----~~-~-------g~~~-~~l~el 280 (656)
+..+.|++|+|+|+- .-...+++.|...|.+|.+|||+.....+ .. . .+.+ .++.+.
T Consensus 330 ~~~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (481)
T 2o3j_A 330 FNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAA 409 (481)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHH
T ss_pred ccccCCCeEEEEeeeeCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHH
Confidence 335899999999984 35678999999999999999999753321 11 1 1333 367889
Q ss_pred hccCCEEEEccCCCccccccccHHH-HhcCCCCcEEEEcCCCchhcHHHH
Q 006212 281 LATADFISLHMPLNPTTSKIFNDET-FAKMKKGVRIVNVARGGVIDEEAL 329 (656)
Q Consensus 281 l~~aDvV~l~~Plt~~T~~li~~~~-l~~mK~gailINvaRg~ivde~aL 329 (656)
++.||.|++++.-. +-+. ++-+. ...|+...+|+|+ |+ ++|.+.+
T Consensus 410 ~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 410 ARGAHAIVVLTEWD-EFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp HTTCSEEEECSCCG-GGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred HcCCCEEEEcCCcH-Hhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 99999999999843 3333 34443 3457776688987 44 4465544
No 323
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=95.32 E-value=0.021 Score=59.30 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=45.3
Q ss_pred cCccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC
Q 006212 556 LEGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (656)
Q Consensus 556 g~~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~ 609 (656)
...+.|.+..+|+||+|++|++.|+++|+||.+++-......+.-+|+++++-+
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 61 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHAT 61 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEcc
Confidence 334677788999999999999999999999999998765667777888887654
No 324
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.28 E-value=0.03 Score=58.66 Aligned_cols=62 Identities=23% Similarity=0.247 Sum_probs=48.6
Q ss_pred CCEEEEEecChhHHH-HHHHHhcCCCEEEEECCCCC---hhHHHHcCCeec---CHHHHh-ccCCEEEEc
Q 006212 229 GKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAP---ADKARAVGVELV---SFDQAL-ATADFISLH 290 (656)
Q Consensus 229 gktvGIIGlG~IG~~-vA~~lk~~G~~Vi~~d~~~~---~~~a~~~g~~~~---~l~ell-~~aDvV~l~ 290 (656)
.|+|.|||+|.+|.+ +|+.|+..|++|.++|.... .+...+.|+.+. +.+++. .++|+|+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~S 73 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIG 73 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEEC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEEC
Confidence 578999999999996 99999999999999997642 234556788653 445555 579999885
No 325
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.27 E-value=0.017 Score=60.76 Aligned_cols=110 Identities=14% Similarity=0.082 Sum_probs=65.5
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCCh--hHHHHc--C------Cee-cCHHHHhccCCEEEEccCCCc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPA--DKARAV--G------VEL-VSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~--~~a~~~--g------~~~-~~l~ell~~aDvV~l~~Plt~ 295 (656)
..+|+|||.|.+|.+++..+...++ ++..||..... ..+.++ . +.. .+..+.+++||+|+++.+..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~- 87 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP- 87 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC-
Confidence 3689999999999999999886555 89999986421 111111 1 111 24567799999999998743
Q ss_pred cccccc-------cH-------HHHhcCCCCcEEEEcCCCchhcH--HHHHHh--HhcCCeEEE
Q 006212 296 TTSKIF-------ND-------ETFAKMKKGVRIVNVARGGVIDE--EALVRA--LDSGVVAQA 341 (656)
Q Consensus 296 ~T~~li-------~~-------~~l~~mK~gailINvaRg~ivde--~aL~~a--L~~g~i~gA 341 (656)
...++- |. +.+....|+++++++ +..+|. ..+.+. +...++.|.
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~--tNPv~~~t~~~~k~s~~p~~rviG~ 149 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA--ANPVDILTYATWKLSGFPKNRVVGS 149 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC--SSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe--CCcHHHHHHHHHHHcCCCHHHEEEc
Confidence 222221 11 122223688999998 445553 333332 333466565
No 326
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.24 E-value=0.042 Score=58.20 Aligned_cols=87 Identities=21% Similarity=0.190 Sum_probs=61.2
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-cC-------HHHHhc-----cCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 292 (656)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 899998765 456677888642 22 222222 4688877765
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006212 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~g-ailINva 319 (656)
..+ + -...+..++++ ..++.++
T Consensus 271 ~~~-~----~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 271 RIE-T----MMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CHH-H----HHHHHHTBCTTTCEEEECC
T ss_pred CHH-H----HHHHHHHHhcCCCEEEEEc
Confidence 211 1 13456667777 7777765
No 327
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=95.23 E-value=0.015 Score=62.46 Aligned_cols=63 Identities=17% Similarity=0.201 Sum_probs=49.3
Q ss_pred CEEEEEecCh---hHHHHHHHHhcCC-CEEEE--ECCCCC--hhHHHHcCCe----ecCHHHHhcc-------CCEEEEc
Q 006212 230 KTLAVMGFGK---VGSEVARRAKGLG-MNVIA--HDPYAP--ADKARAVGVE----LVSFDQALAT-------ADFISLH 290 (656)
Q Consensus 230 ktvGIIGlG~---IG~~vA~~lk~~G-~~Vi~--~d~~~~--~~~a~~~g~~----~~~l~ell~~-------aDvV~l~ 290 (656)
.+|||||+|. ||+..+..++..+ +++.+ +|+... ...+.+.|+. +.++++++.+ .|+|++|
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~ 92 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIA 92 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEEC
Confidence 5899999999 9999998887654 78774 688752 2345667873 3489999975 9999999
Q ss_pred cC
Q 006212 291 MP 292 (656)
Q Consensus 291 ~P 292 (656)
+|
T Consensus 93 tp 94 (398)
T 3dty_A 93 TP 94 (398)
T ss_dssp SC
T ss_pred CC
Confidence 99
No 328
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.22 E-value=0.051 Score=57.64 Aligned_cols=87 Identities=23% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-cC-------HHHHhc-----cCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 292 (656)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 48899999999999999999999999 899998775 456677778642 12 222222 3677777665
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006212 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~g-ailINva 319 (656)
..+ .-...+..++++ ..++.++
T Consensus 275 ~~~-----~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 275 TAQ-----TLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECC
T ss_pred CHH-----HHHHHHHHhhcCCCEEEEEC
Confidence 211 113455667776 6776665
No 329
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.21 E-value=0.052 Score=52.04 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=47.7
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec--CHH----HHhccCCEEEEccCCCc
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV--SFD----QALATADFISLHMPLNP 295 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~--~l~----ell~~aDvV~l~~Plt~ 295 (656)
++|.|.| .|.||+.+++.|...|++|++.++..........++..+ |+. +.+..+|+|+.+.....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~ 73 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGISP 73 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCSST
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcCCc
Confidence 4689999 599999999999999999999998753221111344432 322 57789999998887543
No 330
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.19 E-value=0.021 Score=59.85 Aligned_cols=88 Identities=23% Similarity=0.350 Sum_probs=60.7
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec------CHHHHh----ccCCEEEEccCCCcc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQAL----ATADFISLHMPLNPT 296 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell----~~aDvV~l~~Plt~~ 296 (656)
.|++|.|+|.|.||..+++.++.+|.+|++.+++. ..+.++++|+..+ ++.+.+ ...|+|+-++....
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~- 242 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP- 242 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH-
Confidence 47899999999999999999999999999999865 3455666776321 222222 35677777765211
Q ss_pred ccccccHHHHhcCCCCcEEEEcCC
Q 006212 297 TSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 297 T~~li~~~~l~~mK~gailINvaR 320 (656)
.-...+..|+++..++.++.
T Consensus 243 ----~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 243 ----AFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp ----HHHHHHHHEEEEEEEEECCC
T ss_pred ----HHHHHHHHhhcCCEEEEecc
Confidence 12345566777777777764
No 331
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=95.17 E-value=0.016 Score=60.97 Aligned_cols=63 Identities=16% Similarity=0.202 Sum_probs=44.8
Q ss_pred CEEEEEecChhHHH-HHH-HHhc-CCCEEE-EECCCCCh-hHHHH-cCCee-cCHHHHhcc--CCEEEEccC
Q 006212 230 KTLAVMGFGKVGSE-VAR-RAKG-LGMNVI-AHDPYAPA-DKARA-VGVEL-VSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~-vA~-~lk~-~G~~Vi-~~d~~~~~-~~a~~-~g~~~-~~l~ell~~--aDvV~l~~P 292 (656)
.+|||||+|.||+. .+. .++. -+++|. ++|+.... +.+.+ .++.. .++++++.+ .|+|++|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp 74 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTH 74 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSC
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCC
Confidence 37999999999997 444 3343 378887 57887532 22222 24543 489999986 899999999
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.15 E-value=0.044 Score=57.98 Aligned_cols=87 Identities=23% Similarity=0.254 Sum_probs=60.9
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-cC-------HHHHhc-----cCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 292 (656)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 48899999999999999999999999 899998765 456677777642 12 222222 3688777765
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006212 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~g-ailINva 319 (656)
..+ .-...+..++++ ..++.++
T Consensus 270 ~~~-----~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 270 NVK-----VMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECS
T ss_pred cHH-----HHHHHHHhhccCCcEEEEEe
Confidence 211 113456667777 7777765
No 333
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.13 E-value=0.023 Score=59.62 Aligned_cols=63 Identities=21% Similarity=0.314 Sum_probs=48.6
Q ss_pred CEEEEEecC-hhHHHHHHHHhcC--CCEEE-EECCCCC--hhHHHHcCC-e-ecCHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGFG-KVGSEVARRAKGL--GMNVI-AHDPYAP--ADKARAVGV-E-LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG-~IG~~vA~~lk~~--G~~Vi-~~d~~~~--~~~a~~~g~-~-~~~l~ell~--~aDvV~l~~P 292 (656)
.+|||||+| .+|+..+..++.. ++++. ++|++.. ...+.+.|+ . +.++++++. +.|+|++|+|
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 91 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLP 91 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCC
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 479999999 8999999999876 57775 5788752 233455676 3 458999986 5899999999
No 334
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=95.13 E-value=0.014 Score=60.45 Aligned_cols=53 Identities=15% Similarity=0.126 Sum_probs=43.8
Q ss_pred cCccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCC
Q 006212 556 LEGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDE 608 (656)
Q Consensus 556 g~~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~ 608 (656)
...+.|.+..+|+||++++|++.|+++|+||.+++-......+.-.|++.++-
T Consensus 4 ~~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~ 56 (288)
T 3obi_A 4 HHQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNA 56 (288)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEc
Confidence 34467778899999999999999999999999999875556677778777653
No 335
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=95.12 E-value=0.16 Score=52.89 Aligned_cols=65 Identities=15% Similarity=0.252 Sum_probs=52.1
Q ss_pred ccCCCEEEEEec---ChhHHHHHHHHhcC-CCEEEEECCCC---Ch---hHHHHcCCee---cCHHHHhccCCEEEEc
Q 006212 226 SLVGKTLAVMGF---GKVGSEVARRAKGL-GMNVIAHDPYA---PA---DKARAVGVEL---VSFDQALATADFISLH 290 (656)
Q Consensus 226 ~l~gktvGIIGl---G~IG~~vA~~lk~~-G~~Vi~~d~~~---~~---~~a~~~g~~~---~~l~ell~~aDvV~l~ 290 (656)
.+.|++|++||= |++..+++..+..+ |++|....|.. +. +.+.+.|..+ .++++.+++||+|..-
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~ 225 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVT 225 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEEC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeC
Confidence 478999999998 58999999999999 99999988742 22 2345566643 4899999999999874
No 336
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.12 E-value=0.014 Score=61.60 Aligned_cols=63 Identities=11% Similarity=0.201 Sum_probs=46.4
Q ss_pred CEEEEEecChhHHHHHHHHhcC--------CCEEE-EECCCCC--hhHHHHcCCe--ecCHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL--------GMNVI-AHDPYAP--ADKARAVGVE--LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~--------G~~Vi-~~d~~~~--~~~a~~~g~~--~~~l~ell~--~aDvV~l~~P 292 (656)
-+|||||+|.||+.-++.++.. +.+|. ++|++.. ...+.+.|+. +.+++++++ +.|+|++|+|
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSC
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 3799999999999888776643 23655 4688752 2345666764 458999996 5899999999
No 337
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.09 E-value=0.016 Score=60.89 Aligned_cols=45 Identities=31% Similarity=0.437 Sum_probs=38.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+|.|.||...++.++.+|. +|++.++.. ..+.++++|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga 213 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 68999999999999999999999999 999999874 3455666665
No 338
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.06 E-value=0.028 Score=59.66 Aligned_cols=85 Identities=21% Similarity=0.244 Sum_probs=53.3
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCC-CEEEEE-CCCCC-hhHHH------H-cCCeecCHHHHhccCCEEEEccCCCcccc
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLG-MNVIAH-DPYAP-ADKAR------A-VGVELVSFDQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G-~~Vi~~-d~~~~-~~~a~------~-~g~~~~~l~ell~~aDvV~l~~Plt~~T~ 298 (656)
.+|||+| .|.||+.+.+.|.... +++.+. ++... ..... . ......++++ +..+|+|++|+|... +.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~-s~ 82 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGV-FA 82 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTH-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHH-HH
Confidence 4799999 8999999999998664 587665 43221 11110 0 1122334444 578999999999542 12
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaR 320 (656)
... -..++.|+.+|+.+.
T Consensus 83 ~~a----~~~~~aG~~VId~Sa 100 (345)
T 2ozp_A 83 REF----DRYSALAPVLVDLSA 100 (345)
T ss_dssp HTH----HHHHTTCSEEEECSS
T ss_pred HHH----HHHHHCCCEEEEcCc
Confidence 111 122477899999874
No 339
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.03 E-value=0.021 Score=60.63 Aligned_cols=85 Identities=18% Similarity=0.115 Sum_probs=52.3
Q ss_pred CEEEEEe-cChhHHHHHHHHhcC-CCEEEEE--CCCCC-hhHHHHcC---------------CeecCHHHHhc-cCCEEE
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGL-GMNVIAH--DPYAP-ADKARAVG---------------VELVSFDQALA-TADFIS 288 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~-G~~Vi~~--d~~~~-~~~a~~~g---------------~~~~~l~ell~-~aDvV~ 288 (656)
.+|||+| .|.||+.+++.|... +++|.+. ++... .......+ +...+++++++ .+|+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 4899999 999999999999866 4787665 33221 11111111 11125566656 899999
Q ss_pred EccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 289 l~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
+|+|... +.... -..++.|+.+||.+
T Consensus 89 ~atp~~~-~~~~a----~~~~~aG~~VId~s 114 (354)
T 1ys4_A 89 SALPSDL-AKKFE----PEFAKEGKLIFSNA 114 (354)
T ss_dssp ECCCHHH-HHHHH----HHHHHTTCEEEECC
T ss_pred ECCCchH-HHHHH----HHHHHCCCEEEECC
Confidence 9999432 11111 11235688888876
No 340
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=95.00 E-value=0.27 Score=52.31 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=83.0
Q ss_pred hHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecC--hhHHHHHHHH
Q 006212 171 AATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFG--KVGSEVARRA 248 (656)
Q Consensus 171 aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG--~IG~~vA~~l 248 (656)
.+...+|+|.|.-|....++ .+++=++.+.++ +.+..+.|++|++||=| ++..+.+..+
T Consensus 142 la~~s~vPVING~g~~~HPt--QaL~Dl~Ti~e~-----------------~~~~~l~gl~ia~vGD~~~~va~S~~~~~ 202 (358)
T 4h31_A 142 LGAFAGVPVWNGLTDEFHPT--QILADFLTMLEH-----------------SQGKALADIQFAYLGDARNNVGNSLMVGA 202 (358)
T ss_dssp HHHHSSSCEEESCCSSCCHH--HHHHHHHHHHHT-----------------TTTCCGGGCEEEEESCTTSHHHHHHHHHH
T ss_pred hhhhccCceECCCCcCCCch--HHHHHHHHHHHH-----------------hcCCCcCceEEEecCCCCcccchHHHHHH
Confidence 34556788999655544333 123223332221 12356889999999954 7999999999
Q ss_pred hcCCCEEEEECCCC---Chh-------HHHHcCCee---cCHHHHhccCCEEEEccCCC----ccc---------ccccc
Q 006212 249 KGLGMNVIAHDPYA---PAD-------KARAVGVEL---VSFDQALATADFISLHMPLN----PTT---------SKIFN 302 (656)
Q Consensus 249 k~~G~~Vi~~d~~~---~~~-------~a~~~g~~~---~~l~ell~~aDvV~l~~Plt----~~T---------~~li~ 302 (656)
..+|++|....|.. +.+ .+.+.|..+ .++++.+++||+|..-.=.. ++. ..-++
T Consensus 203 ~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~s~~~~~~~~~~~~~~~~~y~v~ 282 (358)
T 4h31_A 203 AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVN 282 (358)
T ss_dssp HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBC
T ss_pred HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEEEEEEEcccCchhHHHHHHHHhCcccC
Confidence 99999999988742 221 133445432 38999999999998532211 110 12356
Q ss_pred HHHHhc-CCCCcEEEEcC
Q 006212 303 DETFAK-MKKGVRIVNVA 319 (656)
Q Consensus 303 ~~~l~~-mK~gailINva 319 (656)
.+.+++ .||+++|.-|.
T Consensus 283 ~~~l~~~ak~~~i~mH~L 300 (358)
T 4h31_A 283 MNVLKQTGNPNVKFMHCL 300 (358)
T ss_dssp HHHHHHTTCTTCEEEECS
T ss_pred HHHHHhcCCCCcEEECCC
Confidence 777765 47788888886
No 341
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.99 E-value=0.02 Score=60.62 Aligned_cols=64 Identities=28% Similarity=0.353 Sum_probs=43.9
Q ss_pred EEEEEecChhHHHHHHHHhc-CCCEEEEE-CCCCCh--hHHHHc------------------CCee-cCHHHHhccCCEE
Q 006212 231 TLAVMGFGKVGSEVARRAKG-LGMNVIAH-DPYAPA--DKARAV------------------GVEL-VSFDQALATADFI 287 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~-~G~~Vi~~-d~~~~~--~~a~~~------------------g~~~-~~l~ell~~aDvV 287 (656)
+|||+|+|.||+.+++.+.. -++++.+. |+.... ..+... ++.. .+.++++.++|+|
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV 82 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEE
Confidence 79999999999999999986 47888664 443211 112221 1111 1567778899999
Q ss_pred EEccCCC
Q 006212 288 SLHMPLN 294 (656)
Q Consensus 288 ~l~~Plt 294 (656)
+.|+|..
T Consensus 83 ~~atp~~ 89 (337)
T 1cf2_P 83 IDCTPEG 89 (337)
T ss_dssp EECCSTT
T ss_pred EECCCch
Confidence 9999943
No 342
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.97 E-value=0.045 Score=57.61 Aligned_cols=88 Identities=22% Similarity=0.264 Sum_probs=62.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-c--C---HHH----Hh----ccCCEEEEcc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-V--S---FDQ----AL----ATADFISLHM 291 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~--~---l~e----ll----~~aDvV~l~~ 291 (656)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+.. + + -++ +. ...|+|+-++
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 48899999999999999999999999 999998765 346677788642 1 1 111 11 2478888877
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCC
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINvaR 320 (656)
.... .-...+..++++..++.++-
T Consensus 251 g~~~-----~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 251 GAEA-----SIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CCHH-----HHHHHHHHSCTTCEEEECSC
T ss_pred CChH-----HHHHHHHHhcCCCEEEEEec
Confidence 6221 11345666888888888763
No 343
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=94.93 E-value=0.027 Score=58.26 Aligned_cols=101 Identities=20% Similarity=0.309 Sum_probs=65.0
Q ss_pred CCEEEEEec-ChhHHHHHHHHhcCCCEEE-EECCCCChhHHHHcCCeec-CHHHHhc--cCCEEEEccCCCccccccccH
Q 006212 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSKIFND 303 (656)
Q Consensus 229 gktvGIIGl-G~IG~~vA~~lk~~G~~Vi-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~Plt~~T~~li~~ 303 (656)
.++|+|+|. |++|+.+++.++..|++++ ..+|..... ...|+... +++++.. .+|++++++|. +.+...+.
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~-~~~~~~~~- 82 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM--EVLGVPVYDTVKEAVAHHEVDASIIFVPA-PAAADAAL- 82 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHSCCSEEEECCCH-HHHHHHHH-
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc--eECCEEeeCCHHHHhhcCCCCEEEEecCH-HHHHHHHH-
Confidence 468999999 9999999999998899854 577764211 12466554 7999988 89999999992 22333332
Q ss_pred HHHhcCCCCcE-EEEcCCCc-hhcHHHHHHhHhcC
Q 006212 304 ETFAKMKKGVR-IVNVARGG-VIDEEALVRALDSG 336 (656)
Q Consensus 304 ~~l~~mK~gai-lINvaRg~-ivde~aL~~aL~~g 336 (656)
+.. +.|.- +|..+.|= ..+++.+.+..++.
T Consensus 83 ea~---~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~ 114 (288)
T 1oi7_A 83 EAA---HAGIPLIVLITEGIPTLDMVRAVEEIKAL 114 (288)
T ss_dssp HHH---HTTCSEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred HHH---HCCCCEEEEECCCCCHHHHHHHHHHHHHc
Confidence 222 22322 44454442 22345666666553
No 344
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.92 E-value=0.028 Score=59.90 Aligned_cols=86 Identities=20% Similarity=0.160 Sum_probs=55.6
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCC------CEEEEEC-CC-CC--hhH----H---HHcCCeecCHHHHhccCCEEEEcc
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLG------MNVIAHD-PY-AP--ADK----A---RAVGVELVSFDQALATADFISLHM 291 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G------~~Vi~~d-~~-~~--~~~----a---~~~g~~~~~l~ell~~aDvV~l~~ 291 (656)
.+|+|+| .|.+|+.+.+.|...+ .++..+. +. .. ... . ....+.-.+.++ +..+|+|++|+
T Consensus 10 ~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~-~~~~DvVf~al 88 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAV-LGGHDAVFLAL 88 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHH-HTTCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHH-hcCCCEEEECC
Confidence 5899999 9999999999998766 4666653 22 11 110 0 011111224333 56899999999
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
|... ..+....++.|+.+||.+.--
T Consensus 89 g~~~------s~~~~~~~~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 89 PHGH------SAVLAQQLSPETLIIDCGADF 113 (352)
T ss_dssp TTSC------CHHHHHHSCTTSEEEECSSTT
T ss_pred CCcc------hHHHHHHHhCCCEEEEECCCc
Confidence 9552 344444456789999998543
No 345
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=94.91 E-value=0.52 Score=50.14 Aligned_cols=128 Identities=19% Similarity=0.115 Sum_probs=81.8
Q ss_pred hhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHcccccccccccc-ccCCCE--EEEEec---C--hhH
Q 006212 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGV-SLVGKT--LAVMGF---G--KVG 241 (656)
Q Consensus 170 ~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~-~l~gkt--vGIIGl---G--~IG 241 (656)
+.|...+|+|+|+-... .++ .+++=++.+.++ .|. .+.|++ |+++|= | ++.
T Consensus 151 ~lA~~~~vPVINag~g~-HPt--QaLaDl~TI~E~------------------~g~~~l~glkvvva~vGDl~~~~nrva 209 (359)
T 1zq6_A 151 SFAKYSPVPVINMETIT-HPC--QELAHALALQEH------------------FGTPDLRGKKYVLTWTYHPKPLNTAVA 209 (359)
T ss_dssp HHHHHCSSCEEESSSSC-CHH--HHHHHHHHHHHH------------------HTSSCCTTCEEEEEECCCSSCCCSHHH
T ss_pred HHHHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHH------------------hCCCcccCCeeEEEEEecccccccchH
Confidence 34455789999986655 443 223323333321 232 278999 999997 3 899
Q ss_pred HHHHHHHhcCCCEEEEECCC-C---ChhH---H----HHcCCe--e-cCHHHHhccCCEEEEccCCC-----cc------
Q 006212 242 SEVARRAKGLGMNVIAHDPY-A---PADK---A----RAVGVE--L-VSFDQALATADFISLHMPLN-----PT------ 296 (656)
Q Consensus 242 ~~vA~~lk~~G~~Vi~~d~~-~---~~~~---a----~~~g~~--~-~~l~ell~~aDvV~l~~Plt-----~~------ 296 (656)
.+++..+..+|++|....|. . +.+. + ++.|.. . .++++.+++||+|..-.=.. ++
T Consensus 210 ~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~~~~~~ 289 (359)
T 1zq6_A 210 NSALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWEPEKPI 289 (359)
T ss_dssp HHHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCTTHHHH
T ss_pred HHHHHHHHHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEECCccccccCCcchhhHHH
Confidence 99999999999999998876 2 2221 1 244543 3 48999999999998754211 10
Q ss_pred ----ccccccHHHHhcCCCCcEEEEcC
Q 006212 297 ----TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 297 ----T~~li~~~~l~~mK~gailINva 319 (656)
....++.+.++.+| +++|.-|.
T Consensus 290 ~~~~~~y~vt~e~l~~a~-~ai~MHcL 315 (359)
T 1zq6_A 290 RDQYQHFIVDERKMALTN-NGVFSHCL 315 (359)
T ss_dssp HGGGGGGSBCHHHHHTSS-SCEEECCS
T ss_pred HHHhcCCCCCHHHHHhCC-CCEEECCC
Confidence 01235666666666 77776664
No 346
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=94.90 E-value=0.12 Score=56.16 Aligned_cols=64 Identities=28% Similarity=0.375 Sum_probs=50.1
Q ss_pred cCCCEEEEEe-----cCh---hHHHHHHHHhcCCCEEEEECCCC---ChhH-------HHHcCC--e-ecCHHHHhccCC
Q 006212 227 LVGKTLAVMG-----FGK---VGSEVARRAKGLGMNVIAHDPYA---PADK-------ARAVGV--E-LVSFDQALATAD 285 (656)
Q Consensus 227 l~gktvGIIG-----lG~---IG~~vA~~lk~~G~~Vi~~d~~~---~~~~-------a~~~g~--~-~~~l~ell~~aD 285 (656)
|.|++|+||| +|. +..+++..+..+|++|....|.. ..+. +.+.|. . ..++++.+++||
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~eav~~AD 265 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEAFKDAD 265 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHHHTTCS
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhcCCC
Confidence 8899999997 454 99999999999999999988853 2221 234564 3 248999999999
Q ss_pred EEEEc
Q 006212 286 FISLH 290 (656)
Q Consensus 286 vV~l~ 290 (656)
+|..-
T Consensus 266 VVytd 270 (418)
T 2yfk_A 266 VVYPK 270 (418)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99984
No 347
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.89 E-value=0.024 Score=61.36 Aligned_cols=64 Identities=16% Similarity=0.266 Sum_probs=48.5
Q ss_pred CEEEEEecCh---hHHHHHHHHhcCC-CEEE--EECCCCC--hhHHHHcCCe----ecCHHHHhcc-------CCEEEEc
Q 006212 230 KTLAVMGFGK---VGSEVARRAKGLG-MNVI--AHDPYAP--ADKARAVGVE----LVSFDQALAT-------ADFISLH 290 (656)
Q Consensus 230 ktvGIIGlG~---IG~~vA~~lk~~G-~~Vi--~~d~~~~--~~~a~~~g~~----~~~l~ell~~-------aDvV~l~ 290 (656)
.+|||||+|. ||+..+..++..+ +++. ++|+... ...+++.|+. +.++++++.+ .|+|++|
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 4899999999 9999888887654 7876 4688752 2345567773 3489999976 9999999
Q ss_pred cCC
Q 006212 291 MPL 293 (656)
Q Consensus 291 ~Pl 293 (656)
+|.
T Consensus 118 tp~ 120 (417)
T 3v5n_A 118 TPN 120 (417)
T ss_dssp SCT
T ss_pred CCc
Confidence 993
No 348
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.89 E-value=0.017 Score=58.52 Aligned_cols=97 Identities=19% Similarity=0.241 Sum_probs=60.8
Q ss_pred HHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-Ch----------------hHH--
Q 006212 208 ADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PA----------------DKA-- 267 (656)
Q Consensus 208 ~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~----------------~~a-- 267 (656)
+.++++-..|... .-..|.+++|.|||+|.+|..+|+.|...|. ++..+|+.. .. .++
T Consensus 9 y~Rq~~l~~~g~~--~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~ 86 (251)
T 1zud_1 9 YSRQILLDDIALD--GQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQV 86 (251)
T ss_dssp THHHHTSTTTHHH--HHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHH
T ss_pred hhhhcchhhcCHH--HHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHH
Confidence 3444444445431 1236889999999999999999999999887 777887542 00 011
Q ss_pred -----HHc--CCe--e----c---CHHHHhccCCEEEEccCCCccccccccHHHHh
Q 006212 268 -----RAV--GVE--L----V---SFDQALATADFISLHMPLNPTTSKIFNDETFA 307 (656)
Q Consensus 268 -----~~~--g~~--~----~---~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~ 307 (656)
.+. +++ . . +++++++++|+|+.|+. +.+++.++++....
T Consensus 87 ~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~ 141 (251)
T 1zud_1 87 SQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVA 141 (251)
T ss_dssp HHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHH
Confidence 111 121 1 1 24567778888888876 55566666665544
No 349
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=94.88 E-value=0.033 Score=58.37 Aligned_cols=59 Identities=24% Similarity=0.355 Sum_probs=46.5
Q ss_pred CCEEEEEecChhHH-HHHHHHhcC-CCEEEE-ECCCCChhHHHHcCCe-ecCHHHHhcc---CCEEEEccC
Q 006212 229 GKTLAVMGFGKVGS-EVARRAKGL-GMNVIA-HDPYAPADKARAVGVE-LVSFDQALAT---ADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGlG~IG~-~vA~~lk~~-G~~Vi~-~d~~~~~~~a~~~g~~-~~~l~ell~~---aDvV~l~~P 292 (656)
-.+|||||+|.||+ ..++.++.. +++|.+ +|+... ..|+. +.++++++.+ .|+|++|+|
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~-----~~g~~~~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGT-----VEGVNSYTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCC-----CTTSEEESSHHHHHHHCTTCCEEEECSC
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChh-----hcCCCccCCHHHHHhCCCCCCEEEEeCC
Confidence 35899999999998 788888865 788765 687642 24665 3489999875 999999999
No 350
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.86 E-value=0.03 Score=59.47 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=46.4
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcC----Ceec---CHHHHhccCCEEEEccCCC
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVG----VELV---SFDQALATADFISLHMPLN 294 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g----~~~~---~l~ell~~aDvV~l~~Plt 294 (656)
+-+.++|+|+|.|.+|+.+|+.|.. ..+|.+.|.... .+.+.+.. +... ++.++++++|+|+.|+|..
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred cCCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 3344579999999999999999975 478888887642 22222111 1111 3677899999999999943
No 351
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=94.84 E-value=0.044 Score=56.69 Aligned_cols=53 Identities=9% Similarity=-0.001 Sum_probs=44.8
Q ss_pred CccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC
Q 006212 557 EGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (656)
Q Consensus 557 ~~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~ 609 (656)
..+.|.+..+|+||++++|++.|+++|+||.+++-......+.-.|+++++-+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 59 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP 59 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC
Confidence 34677888999999999999999999999999998755566777888887653
No 352
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.84 E-value=0.025 Score=59.16 Aligned_cols=87 Identities=20% Similarity=0.238 Sum_probs=59.1
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec------CHHHHh----ccCCEEEEccCCCcc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQAL----ATADFISLHMPLNPT 296 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell----~~aDvV~l~~Plt~~ 296 (656)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|...+ ++.+.+ ...|+|+.++...+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~- 244 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK- 244 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH-
Confidence 48899999999999999999999999999998765 4556777776321 222222 24677766654211
Q ss_pred ccccccHHHHhcCCCCcEEEEcC
Q 006212 297 TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 297 T~~li~~~~l~~mK~gailINva 319 (656)
.-...+..++++..++.++
T Consensus 245 ----~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 245 ----AFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ----HHHHHHHHEEEEEEEEECS
T ss_pred ----HHHHHHHHhccCCEEEEeC
Confidence 1133455567777777665
No 353
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=94.84 E-value=0.034 Score=58.98 Aligned_cols=64 Identities=11% Similarity=0.099 Sum_probs=48.0
Q ss_pred CCEEEEEecChhHH-HHHHHHhcCCCEEEE-ECCCCC--hhHHHHcCC-e-ecCHHHHhcc--CCEEEEccC
Q 006212 229 GKTLAVMGFGKVGS-EVARRAKGLGMNVIA-HDPYAP--ADKARAVGV-E-LVSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGlG~IG~-~vA~~lk~~G~~Vi~-~d~~~~--~~~a~~~g~-~-~~~l~ell~~--aDvV~l~~P 292 (656)
-.+|||||+|.+|. .++..++.-++++.+ +|+... ...+.+.|. . +.++++++.+ .|+|++|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCC
T ss_pred CcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 35899999999995 567777767899765 787752 233455663 3 4589999975 899999999
No 354
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=94.82 E-value=0.014 Score=57.74 Aligned_cols=63 Identities=17% Similarity=0.211 Sum_probs=43.5
Q ss_pred CEEEEEecChhHHHHHHH--HhcCCCEEEE-ECCCCChhHHHHcCCe---ecCHHHHhc-cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARR--AKGLGMNVIA-HDPYAPADKARAVGVE---LVSFDQALA-TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~--lk~~G~~Vi~-~d~~~~~~~a~~~g~~---~~~l~ell~-~aDvV~l~~Pl 293 (656)
++++|||.|.+|+.+++. ... |+++.+ +|...........|+. ..+++++++ +.|.|++|+|.
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps 150 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPR 150 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCH
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCc
Confidence 579999999999999995 234 888877 4654322111112332 237888886 59999999993
No 355
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.80 E-value=0.02 Score=61.45 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=50.3
Q ss_pred CCEEEEEecChhHHHHHHHHhcC--CCEEEE-ECCCC--ChhHHHHcCCee-cCHHHHhccCCEEEEccCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGL--GMNVIA-HDPYA--PADKARAVGVEL-VSFDQALATADFISLHMPL 293 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~--G~~Vi~-~d~~~--~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Pl 293 (656)
-.+|||||.| +|+.-++.++.. ++++.+ +|+.. ....+++.|+.. .++++++.+.|++++++|.
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~ 76 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRS 76 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC-
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCC
Confidence 3579999999 799878877765 688775 68875 334567788864 4899999999999999993
No 356
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.80 E-value=0.028 Score=61.88 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=59.6
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHH---HcCCeec--CH-HHHhccCCEEEEccCCCccc
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKAR---AVGVELV--SF-DQALATADFISLHMPLNPTT 297 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~---~~g~~~~--~l-~ell~~aDvV~l~~Plt~~T 297 (656)
..++.||++.|||.|.+|.+.++.|...|.+|.++|+....+... +.++.+. .+ ++.+..+|+|+.+. ..++
T Consensus 7 ~~~l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at-~~~~- 84 (457)
T 1pjq_A 7 FCQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT-DDDT- 84 (457)
T ss_dssp EECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC-SCHH-
T ss_pred EEECCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcC-CCHH-
Confidence 457899999999999999999999999999999999876443221 1234332 11 23456788877643 3332
Q ss_pred cccccHHHHhcCCCCcEEEEcC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINva 319 (656)
+|.......+.-.+.||+.
T Consensus 85 ---~n~~i~~~a~~~~i~vn~~ 103 (457)
T 1pjq_A 85 ---VNQRVSDAAESRRIFCNVV 103 (457)
T ss_dssp ---HHHHHHHHHHHTTCEEEET
T ss_pred ---HHHHHHHHHHHcCCEEEEC
Confidence 2334444444444556653
No 357
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=94.79 E-value=0.064 Score=58.41 Aligned_cols=95 Identities=19% Similarity=0.245 Sum_probs=57.3
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE-ECCC------------C-ChhHH----HHcC-------CeecCHH
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPY------------A-PADKA----RAVG-------VELVSFD 278 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~-~d~~------------~-~~~~a----~~~g-------~~~~~l~ 278 (656)
|.++.|++|.|.|+|++|+.+|+.|...|.+|++ .|.+ - +.+.. .+.| .+.++.+
T Consensus 207 g~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g~i~~~~~a~~i~~~ 286 (421)
T 2yfq_A 207 GIKMEDAKIAVQGFGNVGTFTVKNIERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANKTLIGFPGAERITDE 286 (421)
T ss_dssp TCCGGGSCEEEECCSHHHHHHHHHHHHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHCC-------------
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcCCcccCCCceEeCcc
Confidence 5678999999999999999999999999999995 3444 1 11111 1112 1233334
Q ss_pred HHhc-cCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 279 QALA-TADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 279 ell~-~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
+++. +||+++-|.+ .+.++.+....+ +..+|+-.+-+.+-
T Consensus 287 ~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t 327 (421)
T 2yfq_A 287 EFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT 327 (421)
T ss_dssp --------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC
T ss_pred chhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC
Confidence 4443 6888888765 344777777777 35566777777764
No 358
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.79 E-value=0.03 Score=61.97 Aligned_cols=63 Identities=11% Similarity=0.184 Sum_probs=49.6
Q ss_pred CEEEEEec----ChhHHHHHHHHhcC--CCEEE-EECCCCC--hhHHHHcCCe----ecCHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGF----GKVGSEVARRAKGL--GMNVI-AHDPYAP--ADKARAVGVE----LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGl----G~IG~~vA~~lk~~--G~~Vi-~~d~~~~--~~~a~~~g~~----~~~l~ell~--~aDvV~l~~P 292 (656)
.+|||||+ |.||+..++.++.. +++|. ++|+... ...+...|+. +.+++++++ +.|+|++|+|
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 58999999 99999999999876 78876 5788752 2334556763 458999996 6999999999
No 359
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=94.79 E-value=0.023 Score=62.41 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=48.7
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChh--HHHHcC-Ce-----ec---CHHHHhccCCEEEEccCCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPAD--KARAVG-VE-----LV---SFDQALATADFISLHMPLN 294 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~--~a~~~g-~~-----~~---~l~ell~~aDvV~l~~Plt 294 (656)
.+|+|+|+|.|.||+.+|+.|...|.+|.++|+..... .+...+ +. .. +++++++++|+|+.++|..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 47899999999999999999999999999999864211 111112 21 11 3557788999999999954
No 360
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.78 E-value=0.031 Score=59.02 Aligned_cols=88 Identities=16% Similarity=0.259 Sum_probs=61.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHH-HcCCeec----CH---HHHhccCCEEEEccCCCcccc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKAR-AVGVELV----SF---DQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~-~~g~~~~----~l---~ell~~aDvV~l~~Plt~~T~ 298 (656)
.|++|.|+|.|.||...++.++.+|.+|++.++... .+.++ ++|...+ +. .++....|+|+-++.....
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~-- 257 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHA-- 257 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHH--
Confidence 588999999999999999999999999999988753 34455 6776321 22 2223357888777763211
Q ss_pred ccccHHHHhcCCCCcEEEEcCC
Q 006212 299 KIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaR 320 (656)
-...+..++++..++.++.
T Consensus 258 ---~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 258 ---LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ---SHHHHTTEEEEEEEEECSC
T ss_pred ---HHHHHHHhccCCEEEEeCC
Confidence 2345566777777777763
No 361
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=94.78 E-value=0.021 Score=58.87 Aligned_cols=61 Identities=23% Similarity=0.231 Sum_probs=46.4
Q ss_pred CEEEEEecChhHHHHHHHHhc----CCCEEEE-ECCCCChhHHHHcCCeecCHHHHhc--cCCEEEEccCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKG----LGMNVIA-HDPYAPADKARAVGVELVSFDQALA--TADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~----~G~~Vi~-~d~~~~~~~a~~~g~~~~~l~ell~--~aDvV~l~~Pl 293 (656)
.+|||||+|.||+..++.+.. -++++.+ +|+.. .+...|+...+++++++ +.|+|++|+|.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~---~a~~~g~~~~~~~ell~~~~vD~V~i~tp~ 75 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE---LGSLDEVRQISLEDALRSQEIDVAYICSES 75 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC---CCEETTEEBCCHHHHHHCSSEEEEEECSCG
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH---HHHHcCCCCCCHHHHhcCCCCCEEEEeCCc
Confidence 379999999999999988875 3677764 67653 12234555678999986 78999999993
No 362
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.78 E-value=0.049 Score=58.48 Aligned_cols=88 Identities=19% Similarity=0.252 Sum_probs=59.8
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCeec------CHHHHh------ccCCEEEEccCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV------SFDQAL------ATADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aDvV~l~~Pl 293 (656)
.|.+|.|+|.|.+|...++.++.+|. +|++.|... ..+.++++|+..+ ++.+.+ ...|+|+-++..
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCCC
Confidence 58899999999999999999999999 999999775 4566777886422 222221 147788777763
Q ss_pred CccccccccHHHHhcC----CCCcEEEEcC
Q 006212 294 NPTTSKIFNDETFAKM----KKGVRIVNVA 319 (656)
Q Consensus 294 t~~T~~li~~~~l~~m----K~gailINva 319 (656)
...+. ...+..+ +++..++.++
T Consensus 293 ~~~~~----~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 293 PQLVW----PQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp HHHHH----HHHHHHHHHCSCCCCEEEECS
T ss_pred cHHHH----HHHHHHHHhccCCCcEEEEeC
Confidence 21111 1223334 7777777776
No 363
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=94.77 E-value=0.058 Score=57.13 Aligned_cols=60 Identities=17% Similarity=0.314 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHhchhHHHHHHHccccccccccc-cccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECC
Q 006212 188 VAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDP 260 (656)
Q Consensus 188 ~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~ 260 (656)
...||.++-|=|-+.| |.-....| ..|++++|.|||.|.+|..+|+.|...|. ++..+|+
T Consensus 5 ~~~~~~~~~lnl~lm~-------------wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~ 66 (340)
T 3rui_A 5 LKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDN 66 (340)
T ss_dssp HHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHHHHHHH-------------HhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecC
Confidence 4456666655554443 43222223 36899999999999999999999998886 6777775
No 364
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=94.76 E-value=0.02 Score=59.73 Aligned_cols=51 Identities=20% Similarity=0.156 Sum_probs=43.7
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~ 609 (656)
+.|.+..+|+||+|+.|++.|+++|+||.+++-......+.=+|+++++-+
T Consensus 23 ~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~ 73 (302)
T 3o1l_A 23 FRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD 73 (302)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC
Confidence 466778999999999999999999999999998766567788888888753
No 365
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.76 E-value=0.069 Score=58.53 Aligned_cols=85 Identities=25% Similarity=0.334 Sum_probs=62.1
Q ss_pred cccCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHcC--Ceec-CHHHHhccCCEEEEcc
Q 006212 225 VSLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAVG--VELV-SFDQALATADFISLHM 291 (656)
Q Consensus 225 ~~l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g--~~~~-~l~ell~~aDvV~l~~ 291 (656)
..+.|++|+|+|+.- =...+++.|+..|.+|.+|||....+.....+ +.++ +++++++++|.|++++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t 408 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIAT 408 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECS
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEcc
Confidence 468999999999862 36779999999999999999987433222333 4544 7999999999999998
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEc
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINv 318 (656)
+-. +-+.+ + + ++.+|+|+
T Consensus 409 ~h~-ef~~l-d------~-~~~vv~D~ 426 (444)
T 3vtf_A 409 AWP-QYEGL-D------Y-RGKVVVDG 426 (444)
T ss_dssp CCG-GGGGS-C------C-TTCEEEES
T ss_pred CCH-HHhCC-C------c-CCCEEEEC
Confidence 733 22221 1 3 46788885
No 366
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.71 E-value=0.038 Score=58.31 Aligned_cols=97 Identities=13% Similarity=0.208 Sum_probs=61.6
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCC--EEEEECCCCChhH--HHHc--C-----C-ee---cCHHHHhccCCEEEEc
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGM--NVIAHDPYAPADK--ARAV--G-----V-EL---VSFDQALATADFISLH 290 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~--a~~~--g-----~-~~---~~l~ell~~aDvV~l~ 290 (656)
....++|+|||.|.||..+|..+...|. ++..+|....... +.++ . . .. .+.+ .+++||+|+++
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~ 94 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIIT 94 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEEC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEc
Confidence 4567899999999999999999876676 8999998642111 1111 1 1 11 1454 59999999998
Q ss_pred cCCCc---cccc-ccc--H-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 291 MPLNP---TTSK-IFN--D-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 291 ~Plt~---~T~~-li~--~-------~~l~~mK~gailINvaRg~ivd 325 (656)
.-... .|+. ++. . +.+....|++++++++ ..+|
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd 140 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS--NPVD 140 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec--ChHH
Confidence 75321 1332 221 1 1233357899999997 4444
No 367
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.69 E-value=0.24 Score=53.85 Aligned_cols=34 Identities=38% Similarity=0.500 Sum_probs=31.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~ 257 (656)
|.++.|+++.|.|+|++|+.+|+.|..+|.+|++
T Consensus 205 g~~l~gk~vaVqG~GnVG~~aa~~L~e~GakVVa 238 (421)
T 1v9l_A 205 WGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIA 238 (421)
T ss_dssp HSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEE
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHCCCEEEE
Confidence 5689999999999999999999999999999984
No 368
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.69 E-value=0.043 Score=59.82 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=47.3
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEE-EECCCCCh-hHH-H---HcC---Ce-ec----CHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVI-AHDPYAPA-DKA-R---AVG---VE-LV----SFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi-~~d~~~~~-~~a-~---~~g---~~-~~----~l~ell~--~aDvV~l~~P 292 (656)
.+|||||+|.||+..++.++.. +++|. ++|+.... +.+ . +.| .. +. +++++++ +.|+|++|+|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp 100 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSP 100 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCC
Confidence 4799999999999999998875 78875 57877522 221 1 235 33 44 8999997 5899999999
No 369
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.67 E-value=0.08 Score=55.27 Aligned_cols=94 Identities=15% Similarity=0.163 Sum_probs=61.0
Q ss_pred CEEEEEec-ChhHHHHHHHHhcCC--CEEEEECCCCChhHHHHcC-------Cee----cCHHHHhccCCEEEEccCCCc
Q 006212 230 KTLAVMGF-GKVGSEVARRAKGLG--MNVIAHDPYAPADKARAVG-------VEL----VSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 230 ktvGIIGl-G~IG~~vA~~lk~~G--~~Vi~~d~~~~~~~a~~~g-------~~~----~~l~ell~~aDvV~l~~Plt~ 295 (656)
.+|+|||. |.+|..++..|...| .+|..+|.......+.++. +.. .++++.+++||+|+++.+...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~ 80 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR 80 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence 37999998 999999999998767 6899999865222222221 122 257888999999999986332
Q ss_pred cccccc-------cH-------HHHhcCCCCcEEEEcCCCchhcH
Q 006212 296 TTSKIF-------ND-------ETFAKMKKGVRIVNVARGGVIDE 326 (656)
Q Consensus 296 ~T~~li-------~~-------~~l~~mK~gailINvaRg~ivde 326 (656)
..++- |. +.+....|++++++++ ..+|.
T Consensus 81 -~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~ 122 (314)
T 1mld_A 81 -KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNS 122 (314)
T ss_dssp -CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcch
Confidence 11111 11 1122235788999974 45554
No 370
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.65 E-value=0.022 Score=62.18 Aligned_cols=63 Identities=11% Similarity=0.160 Sum_probs=49.5
Q ss_pred CEEEEEec----ChhHHHHHHHHhcC--CCEEE-EECCCCC--hhHHHHcCCe----ecCHHHHhc--cCCEEEEccC
Q 006212 230 KTLAVMGF----GKVGSEVARRAKGL--GMNVI-AHDPYAP--ADKARAVGVE----LVSFDQALA--TADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGl----G~IG~~vA~~lk~~--G~~Vi-~~d~~~~--~~~a~~~g~~----~~~l~ell~--~aDvV~l~~P 292 (656)
.+|||||+ |.||...++.++.. +++|. ++|+... ...+...|+. +.++++++. +.|+|++|+|
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 47999999 99999999999876 78875 5787752 2334555664 458999996 6999999999
No 371
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.65 E-value=0.035 Score=59.00 Aligned_cols=87 Identities=23% Similarity=0.239 Sum_probs=58.7
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCeec------CHHHHhc--------cCCEEEEcc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV------SFDQALA--------TADFISLHM 291 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell~--------~aDvV~l~~ 291 (656)
.|++|.|+|.|.+|...++.++.+|. +|++.++.. ..+.++++|+..+ ++.+.+. ..|+|+-++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 48899999999999999999999999 999998775 4456677776421 2333332 266776665
Q ss_pred CCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 292 PLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 292 Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
.... .-...+..++++..++.++
T Consensus 262 G~~~-----~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 262 GVAE-----TVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp CCHH-----HHHHHHHHEEEEEEEEECS
T ss_pred CCHH-----HHHHHHHHhccCCEEEEEe
Confidence 4111 1133455566666666665
No 372
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=94.64 E-value=0.38 Score=51.93 Aligned_cols=66 Identities=27% Similarity=0.361 Sum_probs=50.4
Q ss_pred ccCCCEEEEEec-----C---hhHHHHHHHHhcCCCEEEEECCCC---ChhH-------HHHcCCee---cCHHHHhccC
Q 006212 226 SLVGKTLAVMGF-----G---KVGSEVARRAKGLGMNVIAHDPYA---PADK-------ARAVGVEL---VSFDQALATA 284 (656)
Q Consensus 226 ~l~gktvGIIGl-----G---~IG~~vA~~lk~~G~~Vi~~d~~~---~~~~-------a~~~g~~~---~~l~ell~~a 284 (656)
.|.|++|+|+|- | ++..+++..+..+|++|....|.. ..+. +.+.|..+ .++++.+++|
T Consensus 188 ~l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav~~a 267 (399)
T 3q98_A 188 NLKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAFKDA 267 (399)
T ss_dssp GGTTCEEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTC
T ss_pred ccCCCEEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHhCCC
Confidence 478999999973 4 788999999999999999988752 2221 23456532 4899999999
Q ss_pred CEEEEcc
Q 006212 285 DFISLHM 291 (656)
Q Consensus 285 DvV~l~~ 291 (656)
|+|..-+
T Consensus 268 DvVytd~ 274 (399)
T 3q98_A 268 DIVYPKS 274 (399)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 9998743
No 373
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.62 E-value=0.011 Score=60.86 Aligned_cols=39 Identities=21% Similarity=0.239 Sum_probs=36.2
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA 262 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~ 262 (656)
..++.||+|.|||.|.+|...++.|...|.+|.+++|..
T Consensus 8 ~~~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 8 AHQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEEcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 467899999999999999999999999999999999865
No 374
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.55 E-value=0.056 Score=57.39 Aligned_cols=87 Identities=25% Similarity=0.324 Sum_probs=58.6
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCee-cC-------HHHHhc-----cCCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVEL-VS-------FDQALA-----TADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~-~~-------l~ell~-----~aDvV~l~~P 292 (656)
.|.+|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|+.. ++ +.+.+. ..|+|+-++.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 58899999999999999999999999 899999776 456677778642 12 222221 3677766665
Q ss_pred CCccccccccHHHHhcCCCC-cEEEEcC
Q 006212 293 LNPTTSKIFNDETFAKMKKG-VRIVNVA 319 (656)
Q Consensus 293 lt~~T~~li~~~~l~~mK~g-ailINva 319 (656)
... .-...+..++++ ..++.++
T Consensus 273 ~~~-----~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 273 NVS-----VMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CHH-----HHHHHHHTBCTTTCEEEECS
T ss_pred CHH-----HHHHHHHHhhccCCEEEEEc
Confidence 211 113345556664 6666665
No 375
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=94.53 E-value=0.1 Score=54.93 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=66.0
Q ss_pred EEEEEecChhHHHHHHHHhc---------CCCEEEE-ECCCCC------hhH--HH--HcCCeec--CHHHHhc--cCCE
Q 006212 231 TLAVMGFGKVGSEVARRAKG---------LGMNVIA-HDPYAP------ADK--AR--AVGVELV--SFDQALA--TADF 286 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~---------~G~~Vi~-~d~~~~------~~~--a~--~~g~~~~--~l~ell~--~aDv 286 (656)
+|||||+|.||+.+++.++. .+.+|.+ +|++.. ... +. ..+..+. ++++++. +.|+
T Consensus 4 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDv 83 (327)
T 3do5_A 4 KIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDV 83 (327)
T ss_dssp EEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSE
T ss_pred EEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCE
Confidence 79999999999999999875 4777776 566531 111 11 1122222 8999985 5899
Q ss_pred EEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh-cHHHHHHhHhcCC
Q 006212 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI-DEEALVRALDSGV 337 (656)
Q Consensus 287 V~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv-de~aL~~aL~~g~ 337 (656)
|+.|+|....+.. .-.-....|+.|.-++-...+.+. ..+.|.++.++..
T Consensus 84 Vv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g 134 (327)
T 3do5_A 84 LIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNG 134 (327)
T ss_dssp EEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhC
Confidence 9999994421111 112234557888777776555554 4566666555543
No 376
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.53 E-value=0.063 Score=50.75 Aligned_cols=66 Identities=17% Similarity=0.188 Sum_probs=47.5
Q ss_pred CCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCChhH-HHHcCCee-----c---CHHHHhccCCEEEEccCCC
Q 006212 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADK-ARAVGVEL-----V---SFDQALATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~-a~~~g~~~-----~---~l~ell~~aDvV~l~~Plt 294 (656)
++++.|.|. |.||+.+++.|...|.+|++.++...... ....++.. . ++.++++.+|+|+.++...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~ 78 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCC
Confidence 479999997 99999999999999999999987642111 00123322 1 3556788899998887643
No 377
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.51 E-value=0.059 Score=56.60 Aligned_cols=88 Identities=16% Similarity=0.171 Sum_probs=59.3
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-------C-HHHH---h-----ccCCEEEEc
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-------S-FDQA---L-----ATADFISLH 290 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-------~-l~el---l-----~~aDvV~l~ 290 (656)
.|++|.|+|.|.+|...++.++.+|.+|++.++.. ..+.++++|+..+ + .+++ . ...|+|+-+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 48899999999999999999999999999998765 3455667776321 1 1122 2 246777776
Q ss_pred cCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006212 291 MPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 291 ~Plt~~T~~li~~~~l~~mK~gailINvaR 320 (656)
+.... + -...+..++++..++.++.
T Consensus 248 ~g~~~-~----~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 248 SGNEK-C----ITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SCCHH-H----HHHHHHHSCTTCEEEECSC
T ss_pred CCCHH-H----HHHHHHHHhcCCEEEEEec
Confidence 65211 1 1334556777777777753
No 378
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.46 E-value=0.036 Score=56.87 Aligned_cols=85 Identities=20% Similarity=0.327 Sum_probs=57.6
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCee-cCH------HHHhccCCEEEEccCCCcccc
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVEL-VSF------DQALATADFISLHMPLNPTTS 298 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~-~~l------~ell~~aDvV~l~~Plt~~T~ 298 (656)
.|++|.|+|. |.+|...++.++.+|++|++.+++. ..+.+++.|... .+. .+.+...|+|+- +.. +
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~--- 199 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-K--- 199 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-T---
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-H---
Confidence 4889999998 9999999999999999999998764 345566677642 121 122245677766 552 1
Q ss_pred ccccHHHHhcCCCCcEEEEcC
Q 006212 299 KIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINva 319 (656)
.-...+..|+++..++.++
T Consensus 200 --~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 200 --EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp --THHHHHTTEEEEEEEEEC-
T ss_pred --HHHHHHHhhccCCEEEEEe
Confidence 1244556667766666665
No 379
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=94.46 E-value=0.03 Score=54.42 Aligned_cols=63 Identities=13% Similarity=0.069 Sum_probs=44.6
Q ss_pred CccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeec----cCccEEEEEEeCCCC--CHHHHHHHh
Q 006212 557 EGNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTF----RRNHGIMAIGVDEEP--NQDSLKEIG 619 (656)
Q Consensus 557 ~~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~----~gg~al~~i~~D~~~--~~e~l~~L~ 619 (656)
..+.|.+..+|+||+++.|+++|+++|+||.+++..... ..+.-.|.+.++-+. +.++.+.|.
T Consensus 92 ~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~~~~~~~l~~~l~ 160 (195)
T 2nyi_A 92 REYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFPFPLYQEVVTALS 160 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred cEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcCCCccHHHHHHHH
Confidence 346677788999999999999999999999999987443 334556666665321 134444444
No 380
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.45 E-value=0.038 Score=58.05 Aligned_cols=87 Identities=23% Similarity=0.247 Sum_probs=57.7
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCeec------CHHHHh----c--cCCEEEEccCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELV------SFDQAL----A--TADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell----~--~aDvV~l~~Pl 293 (656)
.|.+|.|+|.|.||...++.++..|. +|++.|+.. ..+.++++|+..+ ++.+.+ . ..|+|+-++..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 48899999999999999999999999 899999875 3566777776421 122211 1 35666665542
Q ss_pred CccccccccHHHHhcCCCCcEEEEcC
Q 006212 294 NPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 294 t~~T~~li~~~~l~~mK~gailINva 319 (656)
.. .-...+..++++..++.++
T Consensus 246 ~~-----~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 246 VH-----TFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp TT-----HHHHHHHHEEEEEEEEECC
T ss_pred hH-----HHHHHHHHHhcCCEEEEec
Confidence 11 1133445566666666664
No 381
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.41 E-value=0.025 Score=54.06 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.8
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA 262 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~ 262 (656)
.|+++.|+| .|.||..+++.++..|.+|++.++..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 588999999 69999999999999999999998764
No 382
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=94.40 E-value=0.042 Score=57.32 Aligned_cols=106 Identities=20% Similarity=0.258 Sum_probs=69.9
Q ss_pred cccCCCEEEEE-ec-ChhHHHHHHHHhcCCCEEE-EECCCCChhHHHHcCCeec-CHHHHhc--cCCEEEEccCCCcccc
Q 006212 225 VSLVGKTLAVM-GF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTS 298 (656)
Q Consensus 225 ~~l~gktvGII-Gl-G~IG~~vA~~lk~~G~~Vi-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~Plt~~T~ 298 (656)
.-+..+++.|| |+ |+.|+.+++.++.+|++++ ..||..... .-.|+... +++++.+ ..|++++++|. +...
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l~~~G~~~v~~VnP~~~g~--~i~G~~vy~sl~el~~~~~vD~avI~vP~-~~~~ 85 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGK--THLGLPVFNTVKEAKEQTGATASVIYVPP-PFAA 85 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC--EETTEEEESSHHHHHHHHCCCEEEECCCH-HHHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHHHHCCCcEEEEeCCCcCcc--eECCeeeechHHHhhhcCCCCEEEEecCH-HHHH
Confidence 44667889999 99 9999999999999999955 577764111 12466655 7999988 89999999993 2223
Q ss_pred ccccHHHHhcCCCCcEEEEcCCCch-hcHHHHHHhHhcC
Q 006212 299 KIFNDETFAKMKKGVRIVNVARGGV-IDEEALVRALDSG 336 (656)
Q Consensus 299 ~li~~~~l~~mK~gailINvaRg~i-vde~aL~~aL~~g 336 (656)
..+. +.++ ..- ..+++.+.|-- -++..+.+..++.
T Consensus 86 ~~~~-e~i~-~Gi-~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 86 AAIN-EAID-AEV-PLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp HHHH-HHHH-TTC-SEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred HHHH-HHHH-CCC-CEEEEECCCCChHHHHHHHHHHHhc
Confidence 3332 2222 222 23466666532 2344777777665
No 383
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=94.36 E-value=0.048 Score=56.45 Aligned_cols=51 Identities=16% Similarity=0.163 Sum_probs=44.2
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCC
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEE 609 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~ 609 (656)
+.|.+..+|+||+++.|++.|+++|+||.+++-......+.=.|+++++-+
T Consensus 8 ~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~ 58 (287)
T 3nrb_A 8 YVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP 58 (287)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC
Confidence 567778999999999999999999999999998766667788888888754
No 384
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=94.34 E-value=0.077 Score=56.47 Aligned_cols=85 Identities=22% Similarity=0.373 Sum_probs=54.3
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEEEC-CCCChhH-HH--Hc----C-------------------Ceec---CHHH
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAHD-PYAPADK-AR--AV----G-------------------VELV---SFDQ 279 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~~d-~~~~~~~-a~--~~----g-------------------~~~~---~l~e 279 (656)
+|||+|+|+||+.+.+.|... +++|.+.+ |....+. +. +. | +... ++++
T Consensus 19 kVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 98 (354)
T 3cps_A 19 TLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPAE 98 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGGG
T ss_pred EEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChHH
Confidence 899999999999999998876 78887764 4443321 11 00 0 0111 3444
Q ss_pred H-h--ccCCEEEEccCCCccccccccHHHHhcCCCCc--EEEEcCC
Q 006212 280 A-L--ATADFISLHMPLNPTTSKIFNDETFAKMKKGV--RIVNVAR 320 (656)
Q Consensus 280 l-l--~~aDvV~l~~Plt~~T~~li~~~~l~~mK~ga--ilINvaR 320 (656)
+ + ..+|+|+.|+|.-.. . +..-..++.|+ ++|+.+.
T Consensus 99 i~w~~~~vDvV~eatg~~~s-~----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 99 IPWGASGAQIVCESTGVFTT-E----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp CCHHHHTCCEEEECSSSCCS-H----HHHGGGGTTTCSEEEESSCC
T ss_pred CCcccCCCCEEEECCCchhh-H----HHHHHHHHcCCcEEEEeCCC
Confidence 3 2 579999999994431 1 22223467788 9999864
No 385
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.32 E-value=0.04 Score=55.34 Aligned_cols=66 Identities=18% Similarity=0.246 Sum_probs=47.6
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCeec--CHHHH-hccCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVELV--SFDQA-LATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~~--~l~el-l~~aDvV~l~~Plt 294 (656)
.++|.|.|.|.||+.+++.|...|++|++.++... .......+++.+ |+.++ +..+|+|+.+....
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~ 74 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPD 74 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCB
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCcc
Confidence 37899999999999999999999999999988753 223333455432 22211 67888888777643
No 386
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=94.31 E-value=0.069 Score=59.13 Aligned_cols=113 Identities=18% Similarity=0.198 Sum_probs=69.0
Q ss_pred CCEEEEEecChhH--HHHHHHHh---cC-CCEEEEECCCCCh-h----HHH----HcC----Cee-cCHHHHhccCCEEE
Q 006212 229 GKTLAVMGFGKVG--SEVARRAK---GL-GMNVIAHDPYAPA-D----KAR----AVG----VEL-VSFDQALATADFIS 288 (656)
Q Consensus 229 gktvGIIGlG~IG--~~vA~~lk---~~-G~~Vi~~d~~~~~-~----~a~----~~g----~~~-~~l~ell~~aDvV~ 288 (656)
..+|+|||.|.+| .++|..+. ++ |.+|..||..... + ... ..+ +.. .++++.+++||+|+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 4689999999975 55566653 34 8899999987521 1 111 111 122 37888999999999
Q ss_pred EccCCC---------------------cccc-------ccc----c-------HHHHhcCCCCcEEEEcCCCchhcHHHH
Q 006212 289 LHMPLN---------------------PTTS-------KIF----N-------DETFAKMKKGVRIVNVARGGVIDEEAL 329 (656)
Q Consensus 289 l~~Plt---------------------~~T~-------~li----~-------~~~l~~mK~gailINvaRg~ivde~aL 329 (656)
+++|.. .+|. ++. + .+.+....|+++++|++---=+-..++
T Consensus 83 iaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~~~ 162 (480)
T 1obb_A 83 NTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLV 162 (480)
T ss_dssp ECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHHHH
T ss_pred ECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence 999731 1110 110 0 123334578999999974322234555
Q ss_pred HHhHhcCCeEEEE
Q 006212 330 VRALDSGVVAQAA 342 (656)
Q Consensus 330 ~~aL~~g~i~gA~ 342 (656)
.+ +...++.|.+
T Consensus 163 ~k-~p~~rviG~c 174 (480)
T 1obb_A 163 TR-TVPIKAVGFC 174 (480)
T ss_dssp HH-HSCSEEEEEC
T ss_pred HH-CCCCcEEecC
Confidence 44 6667887854
No 387
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.29 E-value=0.062 Score=58.26 Aligned_cols=63 Identities=22% Similarity=0.255 Sum_probs=46.2
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCC---eecC---HHHHhccCCEEE
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGV---ELVS---FDQALATADFIS 288 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~---~~~~---l~ell~~aDvV~ 288 (656)
-+.||+|+|+|-|.+|+.+++.++.+|++|+++|++.. ......... .+.+ +.++++++|+|+
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~ 101 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCEAVS 101 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCCEEE
Confidence 46799999999999999999999999999999998752 211111111 1122 456678899997
No 388
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.28 E-value=0.053 Score=57.32 Aligned_cols=45 Identities=31% Similarity=0.347 Sum_probs=38.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+|.|.||...++.++.+|.+|++.++.. ..+.++++|+
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 234 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA 234 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC
Confidence 58999999999999999999999999999998764 3455666665
No 389
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.22 E-value=0.061 Score=56.19 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=55.7
Q ss_pred CEEEEEecChhHHHHHHHHhc-C-CCEEE-EECCCC-C--hhHHHHcCCee--cCHHHHh-----ccCCEEEEccCCCcc
Q 006212 230 KTLAVMGFGKVGSEVARRAKG-L-GMNVI-AHDPYA-P--ADKARAVGVEL--VSFDQAL-----ATADFISLHMPLNPT 296 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~-~-G~~Vi-~~d~~~-~--~~~a~~~g~~~--~~l~ell-----~~aDvV~l~~Plt~~ 296 (656)
.+|||||+|.||+.+++.+.. + ++++. ++|+.. . ...++..|+.. .+.++++ .+.|+|+.|+| +.
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp-~~- 82 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATS-AS- 82 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSC-HH-
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCC-hH-
Confidence 479999999999999999844 4 67655 467764 2 34456777753 3577775 45899999999 32
Q ss_pred ccccccHHHHhcCCCCcEEEEcC
Q 006212 297 TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 297 T~~li~~~~l~~mK~gailINva 319 (656)
...-+-...++ .++|..+++..
T Consensus 83 ~h~~~a~~al~-a~~Gk~Vi~ek 104 (312)
T 1nvm_B 83 AHVQNEALLRQ-AKPGIRLIDLT 104 (312)
T ss_dssp HHHHHHHHHHH-HCTTCEEEECS
T ss_pred HHHHHHHHHHH-hCCCCEEEEcC
Confidence 22111122221 23377777643
No 390
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=94.22 E-value=0.044 Score=52.77 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=39.1
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCC
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDE 608 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~ 608 (656)
+.|.+..+|+||++++|+++|+++|+||...+.... .+.-.|++.++.
T Consensus 7 ~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~--~~~f~~~~~v~~ 54 (192)
T 1u8s_A 7 LVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF--GKEFTLLMLISG 54 (192)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE--TTEEEEEEEEEE
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec--CCceEEEEEEec
Confidence 567778899999999999999999999999999763 355555666653
No 391
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.20 E-value=0.031 Score=54.95 Aligned_cols=67 Identities=12% Similarity=0.172 Sum_probs=46.9
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHhcCC-CEEEEECCCCCh-hHHHHcCCee-----c---CHHHHhccCCEEEEccCC
Q 006212 227 LVGKTLAVMG-FGKVGSEVARRAKGLG-MNVIAHDPYAPA-DKARAVGVEL-----V---SFDQALATADFISLHMPL 293 (656)
Q Consensus 227 l~gktvGIIG-lG~IG~~vA~~lk~~G-~~Vi~~d~~~~~-~~a~~~g~~~-----~---~l~ell~~aDvV~l~~Pl 293 (656)
...|+|.|.| .|.||+.+++.|...| ++|+++++.... ......++.. . +++++++.+|+|+.++..
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 4468999999 7999999999999999 899999876421 1111112221 1 356678899999877763
No 392
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=94.18 E-value=0.2 Score=55.08 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=31.7
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~ 257 (656)
|.++.|+||.|-|+|++|+..|+.|...|.+|++
T Consensus 247 G~~l~g~~vaVqG~GnVG~~~a~~L~~~GakvVa 280 (470)
T 2bma_A 247 NIPVEKQTAVVSGSGNVALYCVQKLLHLNVKVLT 280 (470)
T ss_dssp TCCGGGCEEEEECSSHHHHHHHHHHHHTTCEECE
T ss_pred cCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEE
Confidence 5678999999999999999999999999999984
No 393
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.17 E-value=0.04 Score=57.66 Aligned_cols=87 Identities=14% Similarity=0.113 Sum_probs=56.2
Q ss_pred CCCEEEEEecChhHHHHHHHHhcC--CCEEEEECCCC-ChhHHHHcCCee-cCHHH---H---hc---cCCEEEEccCCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGL--GMNVIAHDPYA-PADKARAVGVEL-VSFDQ---A---LA---TADFISLHMPLN 294 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~--G~~Vi~~d~~~-~~~~a~~~g~~~-~~l~e---l---l~---~aDvV~l~~Plt 294 (656)
.|++|.|+|.|.+|...++.++.+ |.+|++.+++. ..+.++++|... ++..+ . +. ..|+|+-++...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 689999999999999999999998 99999999765 445566777642 23221 1 11 356666655421
Q ss_pred ccccccccHHHHhcCCCCcEEEEcC
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINva 319 (656)
. . -...+..|+++..++.++
T Consensus 250 ~----~-~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 250 E----T-TYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp H----H-HHHHHHHEEEEEEEEECC
T ss_pred H----H-HHHHHHHhhcCCEEEEeC
Confidence 0 0 123344455555555554
No 394
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.15 E-value=0.047 Score=57.67 Aligned_cols=87 Identities=21% Similarity=0.342 Sum_probs=53.8
Q ss_pred CEEEEEecChhHHHHHHHHhc-CCCEEEEE-CCCCChhHHH---H-------c-C---------------Ceec---CHH
Q 006212 230 KTLAVMGFGKVGSEVARRAKG-LGMNVIAH-DPYAPADKAR---A-------V-G---------------VELV---SFD 278 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~-~G~~Vi~~-d~~~~~~~a~---~-------~-g---------------~~~~---~l~ 278 (656)
.+|||+|+|+||+.+++.+.. -+++|.+. |+....+... + . + +... +++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 489999999999999999875 36888775 5422222111 1 0 0 0111 455
Q ss_pred HH-h--ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCC
Q 006212 279 QA-L--ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 279 el-l--~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg 321 (656)
++ + ..+|+|+.|+|.... + +..-..++.|+..|+++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~-~----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTT-M----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCS-H----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhh-H----HHHHHHHhCCCeEEEeccC
Confidence 55 2 579999999994421 1 2223346778777777644
No 395
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.15 E-value=0.024 Score=56.18 Aligned_cols=66 Identities=14% Similarity=0.223 Sum_probs=45.3
Q ss_pred CCEEEEEecChhHHHHHHHH--hcCCCEEEE-ECCCCC-hhHH-HHcCCeec---CHHHHhc--cCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRA--KGLGMNVIA-HDPYAP-ADKA-RAVGVELV---SFDQALA--TADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~l--k~~G~~Vi~-~d~~~~-~~~a-~~~g~~~~---~l~ell~--~aDvV~l~~Plt 294 (656)
.++++|+|.|++|+.+++.+ ...|+++.+ +|..+. ..-. .-.|+... +++++++ +.|.+++|+|..
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 35799999999999999974 356899887 465433 2111 12355432 6777776 499999999943
No 396
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.15 E-value=0.054 Score=56.75 Aligned_cols=86 Identities=24% Similarity=0.391 Sum_probs=55.2
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-----CHHHH----hc--cCCEEEEccCCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-----SFDQA----LA--TADFISLHMPLN 294 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-----~l~el----l~--~aDvV~l~~Plt 294 (656)
.|++|.|+|. |.||...++.++.+|.+|++.+++. ..+.++++|...+ ++.+. .. ..|+|+-|+...
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 5899999998 9999999999999999999998765 4456666665321 12111 11 356666555421
Q ss_pred ccccccccHHHHhcCCCCcEEEEcC
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINva 319 (656)
.-...+..|+++..++.++
T Consensus 239 ------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 239 ------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp ------CHHHHHHTEEEEEEEEEC-
T ss_pred ------HHHHHHHhhcCCCEEEEEE
Confidence 1233445556666666554
No 397
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.12 E-value=0.036 Score=58.72 Aligned_cols=45 Identities=27% Similarity=0.301 Sum_probs=37.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+|.|.||...++.++.+|. +|++.|+.. ..+.++++|.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa 236 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA 236 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence 48899999999999999999999999 799998764 3455666665
No 398
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=94.11 E-value=0.049 Score=57.06 Aligned_cols=88 Identities=20% Similarity=0.192 Sum_probs=57.0
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCC-hhHHHHcCCee-c------CHHHHhc-----cCCEEEEccCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP-ADKARAVGVEL-V------SFDQALA-----TADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~a~~~g~~~-~------~l~ell~-----~aDvV~l~~Pl 293 (656)
.|+++.|+|. |.||..+++.++..|.+|++.+++.. .+.+++.|... . ++.+.+. ..|+|+.++..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4889999999 89999999999999999999987653 34555666421 1 2222222 35666666542
Q ss_pred CccccccccHHHHhcCCCCcEEEEcCC
Q 006212 294 NPTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 294 t~~T~~li~~~~l~~mK~gailINvaR 320 (656)
.. .-...+..|+++..+++++.
T Consensus 249 ~~-----~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 249 EA-----AIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HH-----HHHHHTTSEEEEEEEEECCC
T ss_pred HH-----HHHHHHHHHhcCCEEEEEeC
Confidence 11 11334455666666666653
No 399
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.09 E-value=0.091 Score=50.58 Aligned_cols=64 Identities=20% Similarity=0.242 Sum_probs=46.0
Q ss_pred CEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCCh-hHHHHcCCeec--CHH----HHhccCCEEEEccCC
Q 006212 230 KTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPA-DKARAVGVELV--SFD----QALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~~-~~a~~~g~~~~--~l~----ell~~aDvV~l~~Pl 293 (656)
++|.|.|. |.||+.+++.|.+.|++|++.++.... ......++..+ |+. +.+..+|+|+.++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 36889987 999999999999999999999886422 11112344332 332 567889999888764
No 400
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=94.05 E-value=0.048 Score=56.91 Aligned_cols=86 Identities=16% Similarity=0.285 Sum_probs=57.9
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-----C---HHHH-hccCCEEEEccCCCccccc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-----S---FDQA-LATADFISLHMPLNPTTSK 299 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-----~---l~el-l~~aDvV~l~~Plt~~T~~ 299 (656)
.+++.|+|+|.+|+.+|+.|...|. |++.|++...-...+.++..+ + |+++ +++||.|+++++.. ..+
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~n 191 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SET 191 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HHH
Confidence 5689999999999999999999999 999998763222445566432 2 3344 77899999988733 233
Q ss_pred cccHHHHhcCCCCcEEEE
Q 006212 300 IFNDETFAKMKKGVRIVN 317 (656)
Q Consensus 300 li~~~~l~~mK~gailIN 317 (656)
+.-......+.+...++-
T Consensus 192 ~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 192 IHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHCCCCeEEE
Confidence 333444555666544443
No 401
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=94.04 E-value=0.24 Score=54.27 Aligned_cols=34 Identities=38% Similarity=0.636 Sum_probs=31.9
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA 257 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~ 257 (656)
|.++.|+|+.|.|+|++|+.+|+.|...|.+|++
T Consensus 225 G~~l~g~~v~VqG~GnVG~~~a~~L~~~GakvVa 258 (449)
T 1bgv_A 225 NDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVT 258 (449)
T ss_dssp TCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 5689999999999999999999999999999986
No 402
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.04 E-value=0.073 Score=55.42 Aligned_cols=91 Identities=15% Similarity=0.224 Sum_probs=57.9
Q ss_pred EEEEEecChhHHHHHHHHhcCCC-EEEEECCCCChhH--HHH-------c--CC--ee-cCHHHHhccCCEEEEccCCCc
Q 006212 231 TLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYAPADK--ARA-------V--GV--EL-VSFDQALATADFISLHMPLNP 295 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~~~~~--a~~-------~--g~--~~-~~l~ell~~aDvV~l~~Plt~ 295 (656)
+|+|||.|.+|..+|..+...|+ +|..+|....... +.+ . .. .. .+. +.+++||+|+++.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~- 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG- 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC-
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC-
Confidence 58999999999999999875566 7999998753211 111 1 22 22 354 6799999999998743
Q ss_pred ccccccc-----------H---HHHhcCCCCcEEEEcCCCchhc
Q 006212 296 TTSKIFN-----------D---ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 296 ~T~~li~-----------~---~~l~~mK~gailINvaRg~ivd 325 (656)
...++-. . +.+....|++++++++ ..+|
T Consensus 79 ~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~ 120 (308)
T 2d4a_B 79 RKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT--NPVD 120 (308)
T ss_dssp CCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC--CchH
Confidence 3223211 1 1122235888999974 3444
No 403
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.00 E-value=0.48 Score=51.49 Aligned_cols=95 Identities=26% Similarity=0.426 Sum_probs=63.4
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEEE--------ECCCC-ChhHH----HHcC-Ce--ecCHHHHh-ccCCE
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADKA----RAVG-VE--LVSFDQAL-ATADF 286 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~--------~d~~~-~~~~a----~~~g-~~--~~~l~ell-~~aDv 286 (656)
|.++.||++.|.|+|++|+.+|+.|...|.+|++ |||.- ..+.. .+.| +. ..+-++++ -.||+
T Consensus 213 g~~l~gk~vaVqG~GnVG~~~a~~L~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~g~v~~~~~~~~e~~~~~~DV 292 (419)
T 3aoe_E 213 GLDLRGARVVVQGLGQVGAAVALHAERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEATGSLPRLDLAPEEVFGLEAEV 292 (419)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHSSCSCCCBCTTTGGGSSCSE
T ss_pred CCCccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhhCCcceeeccchhhhccCceE
Confidence 5679999999999999999999999999999994 34432 22221 1122 11 12223433 37898
Q ss_pred EEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh
Q 006212 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI 324 (656)
Q Consensus 287 V~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv 324 (656)
++-|.. .+.++.+....++- .+|+..|-+.+-
T Consensus 293 liP~A~-----~n~i~~~~A~~l~a-k~V~EgAN~p~t 324 (419)
T 3aoe_E 293 LVLAAR-----EGALDGDRARQVQA-QAVVEVANFGLN 324 (419)
T ss_dssp EEECSC-----TTCBCHHHHTTCCC-SEEEECSTTCBC
T ss_pred EEeccc-----ccccccchHhhCCc-eEEEECCCCcCC
Confidence 888864 34467776666743 477777777753
No 404
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=93.98 E-value=0.053 Score=56.57 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=59.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCC--CEEEEECCCCChh--HHHHc--------CCee-cCHHHHhccCCEEEEccCCCcc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG--MNVIAHDPYAPAD--KARAV--------GVEL-VSFDQALATADFISLHMPLNPT 296 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G--~~Vi~~d~~~~~~--~a~~~--------g~~~-~~l~ell~~aDvV~l~~Plt~~ 296 (656)
++|+|||.|.+|.+++..+...+ -++..+|...... .+.++ .+.. .+-.+.+++||+|+++.+.. .
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~-~ 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVA-Q 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCC-C
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCC-C
Confidence 47999999999999999988655 5899999864211 12111 1111 13366799999999998743 2
Q ss_pred ccccc-------cH-------HHHhcCCCCcEEEEcCCCchhc
Q 006212 297 TSKIF-------ND-------ETFAKMKKGVRIVNVARGGVID 325 (656)
Q Consensus 297 T~~li-------~~-------~~l~~mK~gailINvaRg~ivd 325 (656)
..++- |. +.+....|++++++++ ..+|
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~ 120 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVAT--NPVD 120 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS--SSHH
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEec--CchH
Confidence 22221 11 1122236889999984 4454
No 405
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.93 E-value=0.095 Score=53.54 Aligned_cols=38 Identities=29% Similarity=0.307 Sum_probs=34.3
Q ss_pred cccCCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC
Q 006212 225 VSLVGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA 262 (656)
Q Consensus 225 ~~l~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~ 262 (656)
.++.||++.|+| .|-||+.+++.|...|.+|+++++..
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 457899999999 99999999999999999999998864
No 406
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.84 E-value=0.077 Score=56.12 Aligned_cols=85 Identities=24% Similarity=0.414 Sum_probs=52.6
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEEE-CCCCChhHH-HH------cC---------------------Ceec---CH
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAH-DPYAPADKA-RA------VG---------------------VELV---SF 277 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~~-d~~~~~~~a-~~------~g---------------------~~~~---~l 277 (656)
+|||+|+|+||+.+++.+... +++|.+. |+....+.+ .- .| +... ++
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~dp 84 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNP 84 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSCG
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCCh
Confidence 799999999999999998866 6887775 542222111 10 01 0111 45
Q ss_pred HHH-h--ccCCEEEEccCCCccccccccHHHHhcCCCCc--EEEEcCC
Q 006212 278 DQA-L--ATADFISLHMPLNPTTSKIFNDETFAKMKKGV--RIVNVAR 320 (656)
Q Consensus 278 ~el-l--~~aDvV~l~~Plt~~T~~li~~~~l~~mK~ga--ilINvaR 320 (656)
+++ + ..+|+|+.|+|... +. +..-..++.|+ +||+...
T Consensus 85 ~~l~w~~~~vDvV~eaTg~~~-~~----e~a~~~l~aGak~VVIs~pa 127 (337)
T 3e5r_O 85 DEIPWAEAGAEYVVESTGVFT-DK----EKAAAHLKGGAKKVVISAPS 127 (337)
T ss_dssp GGCCHHHHTCSEEEECSSSCC-SH----HHHTHHHHTTCSEEEESSCC
T ss_pred HHccccccCCCEEEECCCchh-hH----HHHHHHHHcCCCEEEEecCC
Confidence 554 2 57999999999442 22 12222356677 8888763
No 407
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=93.83 E-value=0.12 Score=55.08 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=56.9
Q ss_pred CCEEEEEe-cChhHHHHHHHHhcCC-CEEEEEC-CC-CChhHH-------HHcCCeecCHHHHhccCCEEEEccCCCccc
Q 006212 229 GKTLAVMG-FGKVGSEVARRAKGLG-MNVIAHD-PY-APADKA-------RAVGVELVSFDQALATADFISLHMPLNPTT 297 (656)
Q Consensus 229 gktvGIIG-lG~IG~~vA~~lk~~G-~~Vi~~d-~~-~~~~~a-------~~~g~~~~~l~ell~~aDvV~l~~Plt~~T 297 (656)
-.+||||| .|.+|+.+.+.|..+. .++.... +. ...... .+.-++..+.++++.++|++++|+|..
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~--- 89 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAG--- 89 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTT---
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcH---
Confidence 35799996 7999999999999774 5666543 22 111111 111122235667678999999999944
Q ss_pred cccccHHHHhcCCCCcEEEEcCC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINvaR 320 (656)
...+....+ .|+.+||.+.
T Consensus 90 ---~s~~~~~~~-~g~~VIDlSs 108 (351)
T 1vkn_A 90 ---ASYDLVREL-KGVKIIDLGA 108 (351)
T ss_dssp ---HHHHHHTTC-CSCEEEESSS
T ss_pred ---HHHHHHHHh-CCCEEEECCh
Confidence 345555566 8999999984
No 408
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=93.74 E-value=0.054 Score=57.01 Aligned_cols=86 Identities=16% Similarity=0.273 Sum_probs=56.8
Q ss_pred CCCEEEEE-ecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec------CHHHHhc-----cCCEEEEccCCC
Q 006212 228 VGKTLAVM-GFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQALA-----TADFISLHMPLN 294 (656)
Q Consensus 228 ~gktvGII-GlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell~-----~aDvV~l~~Plt 294 (656)
.|++|.|+ |.|.||..+++.++..|.+|++.+++. ..+.++++|...+ ++.+.+. ..|+|+-|+...
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 58899999 689999999999999999999998765 3455666665321 2222221 366666665521
Q ss_pred ccccccccHHHHhcCCCCcEEEEcC
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINva 319 (656)
.-...+..|+++..++.++
T Consensus 247 ------~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 247 ------YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp ------GHHHHHHTEEEEEEEEECC
T ss_pred ------HHHHHHHHhccCCEEEEEE
Confidence 1233455566666666665
No 409
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=93.71 E-value=0.18 Score=54.23 Aligned_cols=139 Identities=19% Similarity=0.169 Sum_probs=87.8
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~ 308 (656)
--++-|+|.|.+|+.+|+.++.+|++|.++|++.... + .+-+..+|-++...| .+.+..
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~----------~-~~~fp~a~~~~~~~p----------~~~~~~ 262 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA----------T-TARFPTADEVVVDWP----------HRYLAA 262 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS----------C-TTTCSSSSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc----------c-cccCCCceEEEeCCh----------HHHHHh
Confidence 3589999999999999999999999999999875211 0 122356665555544 112222
Q ss_pred ------CCCCcEEEEcCCCchhcHHHHHHhHhcC---CeEEEEeec-----------cCCCCCCCCCccccCCcEEEcCC
Q 006212 309 ------MKKGVRIVNVARGGVIDEEALVRALDSG---VVAQAALDV-----------FTEEPPAKDSKLVQHENVTVTPH 368 (656)
Q Consensus 309 ------mK~gailINvaRg~ivde~aL~~aL~~g---~i~gA~lDV-----------~~~EP~~~~~~L~~~~nvilTPH 368 (656)
+.+++.++=+.++.-.|...|..+|+.+ +|+-.|+-. .+..+ ..-.+|. .|-= - .
T Consensus 263 ~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG~iGSrrk~~~~~~rL~~~G~~~-~~l~Rl~-~PIG--L-d 337 (386)
T 2we8_A 263 QAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAMGSRRTHEDRLARLREAGLTE-EELARLS-SPIG--L-D 337 (386)
T ss_dssp HHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEEECCCHHHHHHHHHHHHHTTCCH-HHHTTCB-CSCS--C-C
T ss_pred hccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEEEecChhHHHHHHHHHHhCCCCh-HHhccEE-cCCC--C-C
Confidence 6788888888899888999999999886 333233220 01100 0001121 1111 1 3
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 006212 369 LGASTKEAQEGVAIEIAEAVVGALRGEL 396 (656)
Q Consensus 369 ~g~~T~ea~~~~~~~~~~~i~~~l~g~~ 396 (656)
+|+.|++ +++..++.+|+...++..
T Consensus 338 IGa~tPe---EIAvSI~AEiia~~~~~~ 362 (386)
T 2we8_A 338 LGGRTPE---ETAVSIAAEIIAKRWGGE 362 (386)
T ss_dssp CCCCSHH---HHHHHHHHHHHHHHTC--
T ss_pred CCCCCHH---HHHHHHHHHHHHHHhcCC
Confidence 7788874 567788888888887653
No 410
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=93.71 E-value=0.11 Score=54.90 Aligned_cols=83 Identities=17% Similarity=0.226 Sum_probs=50.1
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEEE-CCCCCh--hHHHHc--------------------CCeec-CHHHHhccCC
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAH-DPYAPA--DKARAV--------------------GVELV-SFDQALATAD 285 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~~-d~~~~~--~~a~~~--------------------g~~~~-~l~ell~~aD 285 (656)
+|||+|+|+||+.+++.+... +++|.+. |..... ..++.. ++... +.++++..+|
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~vD 83 (343)
T 2yyy_A 4 KVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDAD 83 (343)
T ss_dssp EEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCCC
Confidence 799999999999999998765 6887765 322111 011111 11111 3445567899
Q ss_pred EEEEccCCCccccccccHHHH--hcCCCCcEEEEcC
Q 006212 286 FISLHMPLNPTTSKIFNDETF--AKMKKGVRIVNVA 319 (656)
Q Consensus 286 vV~l~~Plt~~T~~li~~~~l--~~mK~gailINva 319 (656)
+|+.|+|... ..+.. ..++.|+.+|..+
T Consensus 84 iV~eatg~~~------s~~~a~~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 84 IVVDGAPKKI------GKQNLENIYKPHKVKAILQG 113 (343)
T ss_dssp EEEECCCTTH------HHHHHHHTTTTTTCEEEECT
T ss_pred EEEECCCccc------cHHHHHHHHHHCCCEEEECC
Confidence 9999988432 11222 3467777777643
No 411
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.70 E-value=0.033 Score=57.76 Aligned_cols=87 Identities=20% Similarity=0.167 Sum_probs=66.3
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee-c-----C-HHHHhccCCEEEEccCCCccccc
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-V-----S-FDQALATADFISLHMPLNPTTSK 299 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~-~-----~-l~ell~~aDvV~l~~Plt~~T~~ 299 (656)
.|++|.|+| .|.+|...++.++.+|.+|++.+.....+.++++|+.. + + +.+.+...|+|+-|+...
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~g~~----- 226 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGGD----- 226 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESSCHH-----
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECCCcH-----
Confidence 488999997 99999999999999999999886443456677788742 1 3 556667789998887622
Q ss_pred cccHHHHhcCCCCcEEEEcCC
Q 006212 300 IFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 300 li~~~~l~~mK~gailINvaR 320 (656)
.. ...+..++++..++.++.
T Consensus 227 ~~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 227 VG-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp HH-HHHGGGEEEEEEEEECCS
T ss_pred HH-HHHHHhccCCCEEEEeCC
Confidence 12 556777899999998864
No 412
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.70 E-value=0.058 Score=57.21 Aligned_cols=66 Identities=27% Similarity=0.430 Sum_probs=47.9
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHhcCCC--EEEEECCCCChhH--H---HHc-----CCee-cCHHHHhccCCEEEEccC
Q 006212 227 LVGKTLAVMGF-GKVGSEVARRAKGLGM--NVIAHDPYAPADK--A---RAV-----GVEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 227 l~gktvGIIGl-G~IG~~vA~~lk~~G~--~Vi~~d~~~~~~~--a---~~~-----g~~~-~~l~ell~~aDvV~l~~P 292 (656)
+.+++|+|||. |.+|..+|..+..+|. +|..+|....... + .+. .+.. .++.+.+++||+|+++.-
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 35789999998 9999999998887774 8999998642111 1 111 1222 368888999999999864
No 413
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.69 E-value=0.096 Score=57.43 Aligned_cols=64 Identities=22% Similarity=0.336 Sum_probs=46.5
Q ss_pred CEEEEEecChhHHHHHHHHhcC-CCEEEE-ECCCCCh-hH-HHHc-C----------------------Ce-ecCHHHHh
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL-GMNVIA-HDPYAPA-DK-ARAV-G----------------------VE-LVSFDQAL 281 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~-G~~Vi~-~d~~~~~-~~-a~~~-g----------------------~~-~~~l~ell 281 (656)
-+|||||+|.||+.+++.+... +++|.+ +|++... +. +.+. | +. +.++++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL 103 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLIL 103 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHh
Confidence 3799999999999999988755 788765 6776522 22 2222 4 22 34899999
Q ss_pred c--cCCEEEEccCC
Q 006212 282 A--TADFISLHMPL 293 (656)
Q Consensus 282 ~--~aDvV~l~~Pl 293 (656)
. +.|+|+.++|.
T Consensus 104 ~d~dIDaVviaTp~ 117 (446)
T 3upl_A 104 SNPLIDVIIDATGI 117 (446)
T ss_dssp TCTTCCEEEECSCC
T ss_pred cCCCCCEEEEcCCC
Confidence 7 58999999984
No 414
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.68 E-value=0.19 Score=54.98 Aligned_cols=36 Identities=25% Similarity=0.261 Sum_probs=32.2
Q ss_pred ccccCCCEEEEEecChhHHHHHHHHhcCCCEEE-EEC
Q 006212 224 GVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVI-AHD 259 (656)
Q Consensus 224 g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi-~~d 259 (656)
|.++.|+||.|-|+|++|+..|+.|...|.+|+ +.|
T Consensus 234 g~~l~g~~VaVQG~GnVG~~aa~~L~e~GakvVavsD 270 (456)
T 3r3j_A 234 NDNLENKKCLVSGSGNVAQYLVEKLIEKGAIVLTMSD 270 (456)
T ss_dssp TCCSTTCCEEEECCSHHHHHHHHHHHHHTCCBCCEEC
T ss_pred CCCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 567999999999999999999999999999987 344
No 415
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=93.66 E-value=0.074 Score=56.29 Aligned_cols=36 Identities=33% Similarity=0.683 Sum_probs=31.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEE-ECCCCChh
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYAPAD 265 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~-~d~~~~~~ 265 (656)
.+|||.|||+||+.+++++..+|++|++ +||+.+.+
T Consensus 8 ~kvgInGFGRIGrlv~R~~~~~~veivainDp~~d~~ 44 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRACMEKGVKVVAVNDPFIDPE 44 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECTTCCHH
T ss_pred eEEEEECCChHHHHHHHHHHhCCCEEEEEeCCCCChh
Confidence 4899999999999999999988999988 68865443
No 416
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=93.62 E-value=0.038 Score=53.52 Aligned_cols=63 Identities=11% Similarity=0.148 Sum_probs=44.4
Q ss_pred CEEEEEe-cChhHHHHHHHHh-cCCCEEEEECCCCC-hhH-H--HHcCCee-----c---CHHHHhccCCEEEEccC
Q 006212 230 KTLAVMG-FGKVGSEVARRAK-GLGMNVIAHDPYAP-ADK-A--RAVGVEL-----V---SFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk-~~G~~Vi~~d~~~~-~~~-a--~~~g~~~-----~---~l~ell~~aDvV~l~~P 292 (656)
|++.|.| .|.||+.+++.|. ..|++|++.++... ... . ...++.. . +++++++.+|+|+.++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 6799999 6999999999999 89999999987632 111 1 1112221 1 24567788888887776
No 417
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.58 E-value=0.16 Score=53.94 Aligned_cols=100 Identities=15% Similarity=0.173 Sum_probs=61.2
Q ss_pred CEEEEEe-cChhHHH-HH----HHHhcCC-CEE----------EEECCCCC--hhHHHHcCCe--ecCHHHHhcc--CCE
Q 006212 230 KTLAVMG-FGKVGSE-VA----RRAKGLG-MNV----------IAHDPYAP--ADKARAVGVE--LVSFDQALAT--ADF 286 (656)
Q Consensus 230 ktvGIIG-lG~IG~~-vA----~~lk~~G-~~V----------i~~d~~~~--~~~a~~~g~~--~~~l~ell~~--aDv 286 (656)
.+||||| +|.||.. .+ +.++..+ ..+ .++|++.. ...+.+.|+. +.++++++++ .|+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~ 86 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTM 86 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCE
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCE
Confidence 3799999 9999998 66 6666433 332 37888763 3345567874 4589999975 899
Q ss_pred EEEccCCCccccccccHHHHhcCCCCcEEEEcCC---CchhcHHHHHHhHhc
Q 006212 287 ISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR---GGVIDEEALVRALDS 335 (656)
Q Consensus 287 V~l~~Plt~~T~~li~~~~l~~mK~gailINvaR---g~ivde~aL~~aL~~ 335 (656)
|++|+|.. +.. +-....|+.|.-++ |-. -.+-+.++|.++.++
T Consensus 87 V~i~tp~~--~h~---~~~~~al~~Gk~V~-~EKP~a~~~~~~~~l~~~a~~ 132 (383)
T 3oqb_A 87 FFDAATTQ--ARP---GLLTQAINAGKHVY-CEKPIATNFEEALEVVKLANS 132 (383)
T ss_dssp EEECSCSS--SSH---HHHHHHHTTTCEEE-ECSCSCSSHHHHHHHHHHHHH
T ss_pred EEECCCch--HHH---HHHHHHHHCCCeEE-EcCCCCCCHHHHHHHHHHHHH
Confidence 99999942 221 22233355554444 332 122234555555444
No 418
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.56 E-value=0.061 Score=56.20 Aligned_cols=46 Identities=20% Similarity=0.242 Sum_probs=38.9
Q ss_pred CCCEEEEEecC-hhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCe
Q 006212 228 VGKTLAVMGFG-KVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVE 273 (656)
Q Consensus 228 ~gktvGIIGlG-~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~ 273 (656)
.|++|.|+|.| .||...++.++.+|.+|++.+++. ..+.++++|..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~ 191 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAA 191 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCc
Confidence 58899999998 999999999999999999998765 45666677653
No 419
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=93.54 E-value=0.17 Score=53.53 Aligned_cols=90 Identities=24% Similarity=0.288 Sum_probs=64.8
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec------CHHHHh---ccCCEEEEccCCCccc
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV------SFDQAL---ATADFISLHMPLNPTT 297 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~------~l~ell---~~aDvV~l~~Plt~~T 297 (656)
.|++|.|+| .|.||...++.++.+|.+|++.+.....+.++++|...+ ++.+.+ ...|+|+-++.....+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~ 262 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTET 262 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhh
Confidence 589999999 799999999999999999998874334566777886431 233322 3589999888733111
Q ss_pred cccccHHHHhcCCCCcEEEEcCCC
Q 006212 298 SKIFNDETFAKMKKGVRIVNVARG 321 (656)
Q Consensus 298 ~~li~~~~l~~mK~gailINvaRg 321 (656)
-...+..++++..++.++..
T Consensus 263 ----~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 263 ----WAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp ----HGGGGBCSSSCCEEEESCCS
T ss_pred ----hHHHHHhhcCCcEEEEeCCC
Confidence 13345668999999999854
No 420
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.47 E-value=0.062 Score=56.31 Aligned_cols=45 Identities=33% Similarity=0.513 Sum_probs=37.7
Q ss_pred CCCEEEEE-ecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVM-GFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGII-GlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+ |.|.||...++.++.+|.+|++.++.. ..+.++++|.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa 196 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA 196 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence 68999999 799999999999999999999999864 3445555554
No 421
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.46 E-value=0.081 Score=58.66 Aligned_cols=107 Identities=15% Similarity=0.237 Sum_probs=67.4
Q ss_pred CCEEEEEecChhHHH-HHHHHhcCCCEEEEECCCCCh--hHHHHcCCeec--CHHHHhccCCEEEEc--cCCC-ccc---
Q 006212 229 GKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAPA--DKARAVGVELV--SFDQALATADFISLH--MPLN-PTT--- 297 (656)
Q Consensus 229 gktvGIIGlG~IG~~-vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g~~~~--~l~ell~~aDvV~l~--~Plt-~~T--- 297 (656)
.|+|.|||+|.+|.+ +|+.|+..|++|.++|..... +..++.|+.+. .-.+.+..+|+|++. +|.+ |+.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a 101 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAA 101 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHH
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHH
Confidence 589999999999996 899999999999999976532 34556788654 122346789999875 3321 111
Q ss_pred ----cccccH-HHHhc-CCCCc-EEEEcCCCchhcHHHHHHhHhc
Q 006212 298 ----SKIFND-ETFAK-MKKGV-RIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 298 ----~~li~~-~~l~~-mK~ga-ilINvaRg~ivde~aL~~aL~~ 335 (656)
..++++ +.+.. |+... +-|--+.|+--...-+...|+.
T Consensus 102 ~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~ 146 (494)
T 4hv4_A 102 REARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAE 146 (494)
T ss_dssp HHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHh
Confidence 112333 23333 34332 3333346877666656666664
No 422
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=93.45 E-value=0.11 Score=58.87 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=51.2
Q ss_pred cCceeecCCCC-ChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccc-cccCCCEEEEEecChhHHHHHHHHhcCC
Q 006212 175 FGCLVVNAPIA-NTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVG-VSLVGKTLAVMGFGKVGSEVARRAKGLG 252 (656)
Q Consensus 175 ~GI~V~n~p~~-n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g-~~l~gktvGIIGlG~IG~~vA~~lk~~G 252 (656)
.+-..++-... +....||.+.-+-|-+.| |.-....| ..|++++|.|||+|.+|..+|+.|...|
T Consensus 283 l~~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aG 349 (615)
T 4gsl_A 283 LAPRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWG 349 (615)
T ss_dssp SCCEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTT
T ss_pred cceeEEeccccCCHHHHHhhhhhhhhHHHH-------------HhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcC
Confidence 33455555332 566777777666555554 43222223 3689999999999999999999999888
Q ss_pred C-EEEEECCC
Q 006212 253 M-NVIAHDPY 261 (656)
Q Consensus 253 ~-~Vi~~d~~ 261 (656)
. ++..+|..
T Consensus 350 VG~ItLvD~D 359 (615)
T 4gsl_A 350 VRKITFVDNG 359 (615)
T ss_dssp CCEEEEECCC
T ss_pred CCEEEEEcCC
Confidence 6 77788764
No 423
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=93.45 E-value=0.071 Score=55.72 Aligned_cols=62 Identities=8% Similarity=0.066 Sum_probs=45.1
Q ss_pred CEEEEEecChhHHHHHHHHhcCCCEEEE-ECCCC--ChhHHH----HcCC--e-ecCHHHHhcc--CCEEEEccC
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLGMNVIA-HDPYA--PADKAR----AVGV--E-LVSFDQALAT--ADFISLHMP 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G~~Vi~-~d~~~--~~~~a~----~~g~--~-~~~l~ell~~--aDvV~l~~P 292 (656)
.++||||+|.+|+..++.+ .-+++|.+ +|+.. ..+.+. +.|+ . +.++++++.+ .|+|++|+|
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp 76 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTV 76 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSS
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCC
Confidence 4799999999999777776 55788876 78764 222222 2354 3 3489999975 899999998
No 424
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.41 E-value=0.064 Score=55.82 Aligned_cols=45 Identities=22% Similarity=0.226 Sum_probs=38.0
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+| .|.||...++.++..|.+|++.+++. ..+.+++.|.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 194 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA 194 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 589999999 89999999999999999999998864 3455666665
No 425
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.39 E-value=0.096 Score=55.71 Aligned_cols=46 Identities=30% Similarity=0.384 Sum_probs=38.4
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCC-CEEEEECCCC-ChhHHHHcCCe
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLG-MNVIAHDPYA-PADKARAVGVE 273 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G-~~Vi~~d~~~-~~~~a~~~g~~ 273 (656)
.|++|.|+|.|.+|...++.++.+| .+|++.++.. ..+.++++|+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 242 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc
Confidence 4889999999999999999999999 6999999765 34556667753
No 426
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=93.38 E-value=0.064 Score=55.33 Aligned_cols=86 Identities=15% Similarity=0.119 Sum_probs=55.3
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec--CHHHHhccCCEEEEccCCCccccccccHHH
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV--SFDQALATADFISLHMPLNPTTSKIFNDET 305 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~--~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 305 (656)
.|++|.|+|.|.+|...++.++.+|.+|++.+.....+.++++|+..+ +.+++-...|+|+-|+... .+ ...
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~lGa~~v~~d~~~v~~g~Dvv~d~~g~~-~~-----~~~ 215 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSASLSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQ-NA-----AAL 215 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHHHTEEEEESSGGGCCSCEEEEECC-------------TT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEChhhHHHHHHcCCCEEEcCHHHhCCCccEEEECCCch-hH-----HHH
Confidence 589999999999999999999999999999993236677788887432 2111123456666655421 11 223
Q ss_pred HhcCCCCcEEEEcC
Q 006212 306 FAKMKKGVRIVNVA 319 (656)
Q Consensus 306 l~~mK~gailINva 319 (656)
+..++++..++.++
T Consensus 216 ~~~l~~~G~~v~~g 229 (315)
T 3goh_A 216 VPSLKANGHIICIQ 229 (315)
T ss_dssp GGGEEEEEEEEEEC
T ss_pred HHHhcCCCEEEEEe
Confidence 45566666666653
No 427
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.34 E-value=0.033 Score=58.82 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=57.5
Q ss_pred EEEEEecChhHHHHHHHHhcC---------CCEEEE-ECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCcccccc
Q 006212 231 TLAVMGFGKVGSEVARRAKGL---------GMNVIA-HDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKI 300 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~---------G~~Vi~-~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~l 300 (656)
+|||||+|.||+.+++.++.. +++|.+ +|++..............++++++ +.|+|+.|+|... ...-
T Consensus 5 rvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~-~a~~ 82 (332)
T 2ejw_A 5 KIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVE-APLR 82 (332)
T ss_dssp EEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSH-HHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcH-HHHH
Confidence 699999999999999988754 467655 576532111001111234788888 9999999998432 1111
Q ss_pred ccHHHHhcCCCCcEEEEcCCCchh-cHHHHHHhHhcC
Q 006212 301 FNDETFAKMKKGVRIVNVARGGVI-DEEALVRALDSG 336 (656)
Q Consensus 301 i~~~~l~~mK~gailINvaRg~iv-de~aL~~aL~~g 336 (656)
+ ..+.|+.|.-++-.....+. ..+.|.++-++.
T Consensus 83 ~---~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 83 L---VLPALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp H---HHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred H---HHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 1 12234445444443222222 345666555554
No 428
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.32 E-value=0.095 Score=55.94 Aligned_cols=46 Identities=39% Similarity=0.435 Sum_probs=39.1
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCe
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVE 273 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~ 273 (656)
.|++|.|+|.|.+|...++.++.+|. +|++.|+.. ..+.++++|+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 232 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE 232 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 48899999999999999999999999 799998765 44667777764
No 429
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=93.30 E-value=0.051 Score=57.48 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=37.7
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+| .|.||..+++.++.+|.+|++.++.. ..+.+++.|.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga 209 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC 209 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC
Confidence 488999999 79999999999999999999998764 3445566665
No 430
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=93.29 E-value=0.062 Score=55.14 Aligned_cols=63 Identities=17% Similarity=0.284 Sum_probs=43.4
Q ss_pred CEEEEEe-cChhHHHHHHHHhc-CCCEEEE-ECCCCChhHHH--------HcCCee-cCHHHHhccCCEEEEccC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKG-LGMNVIA-HDPYAPADKAR--------AVGVEL-VSFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~-~G~~Vi~-~d~~~~~~~a~--------~~g~~~-~~l~ell~~aDvV~l~~P 292 (656)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+..+..... ..|+.. .++++++.++|+|+-++|
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~ 82 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTL 82 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCC
Confidence 4899999 99999999998874 4888877 68753211100 013333 368888888888877664
No 431
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.23 E-value=0.068 Score=55.53 Aligned_cols=45 Identities=29% Similarity=0.315 Sum_probs=36.1
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|+++.|.|. |.||..+++.++..|++|++.++.. ..+.+++.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~ 191 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF 191 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC
Confidence 5899999998 9999999999999999999998764 2233444443
No 432
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.19 E-value=0.053 Score=56.44 Aligned_cols=45 Identities=27% Similarity=0.313 Sum_probs=37.1
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHH-HHcCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKA-RAVGV 272 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a-~~~g~ 272 (656)
.|++|.|+|. |.||..+++.++..|++|++.+++. ..+.+ +++|.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~ 196 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF 196 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC
Confidence 5899999999 9999999999999999999998764 33444 55565
No 433
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.18 E-value=0.062 Score=55.74 Aligned_cols=45 Identities=31% Similarity=0.417 Sum_probs=37.5
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+| .|.||...++.++..|.+|++.++.. ..+.+++.|.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga 186 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA 186 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC
Confidence 589999999 89999999999999999999998764 3445566664
No 434
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.06 E-value=0.056 Score=56.52 Aligned_cols=35 Identities=26% Similarity=0.489 Sum_probs=32.5
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA 262 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~ 262 (656)
.|++|.|+|.|.+|...++.++.+|. +|++.++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~ 199 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNP 199 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 68999999999999999999999999 999999764
No 435
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=93.01 E-value=0.15 Score=57.81 Aligned_cols=91 Identities=15% Similarity=0.213 Sum_probs=62.0
Q ss_pred cccCCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-------------------Ch-hH----HHHc--CCee--c
Q 006212 225 VSLVGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-------------------PA-DK----ARAV--GVEL--V 275 (656)
Q Consensus 225 ~~l~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-------------------~~-~~----a~~~--g~~~--~ 275 (656)
..|.+++|.|||+|.+|..+|+.|...|. ++..+|... +. +. ..+. +++. .
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~ 402 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 402 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence 57899999999999999999999999887 788887531 00 00 1111 1211 1
Q ss_pred ----------------------CHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 276 ----------------------SFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 276 ----------------------~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
.++++++++|+|+.|+. +.+++.+++...... +..+|+.+
T Consensus 403 ~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 403 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp CCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred eccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 13567889999999887 566788887765542 34566643
No 436
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=92.96 E-value=0.074 Score=56.41 Aligned_cols=84 Identities=17% Similarity=0.288 Sum_probs=50.4
Q ss_pred CEEEEEe-cChhHHHHHHHHhcC-CCEEEEE-C-CC-CChhHHHH-------------cCCeec--CHHHHhccCCEEEE
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGL-GMNVIAH-D-PY-APADKARA-------------VGVELV--SFDQALATADFISL 289 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~-G~~Vi~~-d-~~-~~~~~a~~-------------~g~~~~--~l~ell~~aDvV~l 289 (656)
.+|||+| +|.||+.+.+.|... .+++.+. + +. ........ ..+.+. +.++ +.++|+|++
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvVf~ 83 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVVLS 83 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEEEE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEEEE
Confidence 4799999 999999999999866 4677665 3 21 11111111 111222 3334 478999999
Q ss_pred ccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 290 HMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 290 ~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
|+|... +..+ .-..++.|+.+||.+
T Consensus 84 atp~~~-s~~~----a~~~~~aG~~VId~s 108 (350)
T 2ep5_A 84 ALPNEL-AESI----ELELVKNGKIVVSNA 108 (350)
T ss_dssp CCCHHH-HHHH----HHHHHHTTCEEEECS
T ss_pred CCChHH-HHHH----HHHHHHCCCEEEECC
Confidence 999332 1111 111245677888876
No 437
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.86 E-value=0.14 Score=49.35 Aligned_cols=64 Identities=20% Similarity=0.169 Sum_probs=46.7
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee-----c---CHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-----V---SFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~-----~---~l~ell~~aDvV~l~~Pl 293 (656)
++|.|.| .|.||+.+++.|...|++|++.++..........++.+ . ++.++++.+|+|+.+...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 6899999 69999999999999999999999874221111122222 1 356788899999887753
No 438
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=92.84 E-value=0.11 Score=53.82 Aligned_cols=63 Identities=19% Similarity=0.244 Sum_probs=41.9
Q ss_pred CEEEEEe-cChhHHHHHHHHhc-CCCEEEE-ECCCCCh----hHHH-----HcCCeec-CHHHHhccCCEEEEccC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKG-LGMNVIA-HDPYAPA----DKAR-----AVGVELV-SFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~-~G~~Vi~-~d~~~~~----~~a~-----~~g~~~~-~l~ell~~aDvV~l~~P 292 (656)
.+|+|+| +|+||+.+++.+.. -++++.+ +|+..+. +... ..|+... ++++++.++|+|+-+++
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~ 97 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQ 97 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCC
Confidence 4799999 99999999999874 4888776 5765321 1111 1234333 67777777777765543
No 439
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.80 E-value=0.15 Score=55.52 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=59.4
Q ss_pred CCCEEEEEecC----------hhHHHHHHHHhcCCCEEEEECCCCChhHH----HHcC--------Cee-cCHHHHhccC
Q 006212 228 VGKTLAVMGFG----------KVGSEVARRAKGLGMNVIAHDPYAPADKA----RAVG--------VEL-VSFDQALATA 284 (656)
Q Consensus 228 ~gktvGIIGlG----------~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a----~~~g--------~~~-~~l~ell~~a 284 (656)
.|++|+|+|+. .-...+++.|...|.+|.+|||+.+.... ...+ ..+ .++.+.++.|
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASS 391 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHC
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCC
Confidence 79999999997 46788999999999999999997421110 1111 122 3688899999
Q ss_pred CEEEEccCCCccccccccHHHHhcCCCCcEEEEc
Q 006212 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNV 318 (656)
Q Consensus 285 DvV~l~~Plt~~T~~li~~~~l~~mK~gailINv 318 (656)
|+|++++.- ++-+.+ + ...|+ +.+|+|+
T Consensus 392 d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 392 DVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp SEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred cEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 999999874 322211 1 34455 6788887
No 440
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.75 E-value=0.12 Score=54.28 Aligned_cols=95 Identities=20% Similarity=0.223 Sum_probs=59.6
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCChh---HHHH-cCCee--cC-------HHHHhccCCEEEEccCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAPAD---KARA-VGVEL--VS-------FDQALATADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~~~---~a~~-~g~~~--~~-------l~ell~~aDvV~l~~Pl 293 (656)
.+++|.|.| .|.||+.+++.|...|++|++.++..... .... .++.. .| +.++++.+|+|+.++..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 367899998 59999999999998899999988765322 1111 13321 13 56678999999877653
Q ss_pred CccccccccHHHHhcCCC-C--cEEEEcCCCc
Q 006212 294 NPTTSKIFNDETFAKMKK-G--VRIVNVARGG 322 (656)
Q Consensus 294 t~~T~~li~~~~l~~mK~-g--ailINvaRg~ 322 (656)
............+..+++ | ..+|+++...
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 311112222333433322 3 3788887653
No 441
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.75 E-value=0.1 Score=54.97 Aligned_cols=46 Identities=15% Similarity=0.122 Sum_probs=38.2
Q ss_pred CCCEEEEEecChhHHHH-HHHH-hcCCCE-EEEECCCCC----hhHHHHcCCe
Q 006212 228 VGKTLAVMGFGKVGSEV-ARRA-KGLGMN-VIAHDPYAP----ADKARAVGVE 273 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~v-A~~l-k~~G~~-Vi~~d~~~~----~~~a~~~g~~ 273 (656)
.+++|.|+|.|.+|... ++.+ +.+|.+ |++.++... .+.++++|+.
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~ 224 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDAT 224 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCc
Confidence 35899999999999999 9999 999997 999988654 4566677753
No 442
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.72 E-value=0.095 Score=55.30 Aligned_cols=86 Identities=16% Similarity=0.254 Sum_probs=51.6
Q ss_pred CEEEEEecChhHHHHHHHHhcC---CCEEEEECCCCChhHHH-------H-----------------cC--Ceec---CH
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL---GMNVIAHDPYAPADKAR-------A-----------------VG--VELV---SF 277 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~---G~~Vi~~d~~~~~~~a~-------~-----------------~g--~~~~---~l 277 (656)
.+|||+|+|+||+.+.+.|... +++|.+.+...+.+... . .| +.+. ++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 4799999999999999998754 58988653321111100 0 01 1111 34
Q ss_pred HHH-hc--cCCEEEEccCCCccccccccHHHHhcCCCCc--EEEEcCC
Q 006212 278 DQA-LA--TADFISLHMPLNPTTSKIFNDETFAKMKKGV--RIVNVAR 320 (656)
Q Consensus 278 ~el-l~--~aDvV~l~~Plt~~T~~li~~~~l~~mK~ga--ilINvaR 320 (656)
+++ +. .+|+|+.|+|... +... .-..++.|+ ++|+.+.
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~-s~e~----a~~~l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFR-NREK----AELHLQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCC-BHHH----HTHHHHTTCSEEEESSCC
T ss_pred HHCcccccCCCEEEECCccch-hHHH----HHHHHHcCCcEEEEeCCC
Confidence 444 33 7999999999543 2211 112246688 9999764
No 443
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=92.71 E-value=0.23 Score=51.83 Aligned_cols=96 Identities=19% Similarity=0.157 Sum_probs=60.7
Q ss_pred CEEEEEe-cChhHHHHHHHHhc---CCCEEEEECCCCC-hhHHHHc--C-C--eec-----CHHHHhccCCEEEEccCCC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKG---LGMNVIAHDPYAP-ADKARAV--G-V--ELV-----SFDQALATADFISLHMPLN 294 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~---~G~~Vi~~d~~~~-~~~a~~~--g-~--~~~-----~l~ell~~aDvV~l~~Plt 294 (656)
.+|+||| .|.+|.++|..|.. +.-++..+|.... ...+.++ . . ... +..+.+++||+|+++.+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~- 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV- 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC-
Confidence 4799999 99999999999864 4568999997641 1122111 1 1 121 456789999999999863
Q ss_pred ccccccc-------cHH-------HHhcCCCCcEEEEcCCCchhcHHH
Q 006212 295 PTTSKIF-------NDE-------TFAKMKKGVRIVNVARGGVIDEEA 328 (656)
Q Consensus 295 ~~T~~li-------~~~-------~l~~mK~gailINvaRg~ivde~a 328 (656)
+...++- |.. .+....|++++++++ ..+|.-.
T Consensus 80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t 125 (312)
T 3hhp_A 80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTV 125 (312)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHH
Confidence 3222221 111 122346788999995 5555433
No 444
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=92.69 E-value=0.43 Score=47.49 Aligned_cols=38 Identities=29% Similarity=0.395 Sum_probs=33.3
Q ss_pred cccCCCEEEEEec-Ch--hHHHHHHHHhcCCCEEEEECCCC
Q 006212 225 VSLVGKTLAVMGF-GK--VGSEVARRAKGLGMNVIAHDPYA 262 (656)
Q Consensus 225 ~~l~gktvGIIGl-G~--IG~~vA~~lk~~G~~Vi~~d~~~ 262 (656)
.++.||++.|.|. |. ||+.+|+.|...|++|++.++..
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 4688999999997 45 99999999999999999988764
No 445
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=92.65 E-value=0.16 Score=56.68 Aligned_cols=109 Identities=15% Similarity=0.185 Sum_probs=67.7
Q ss_pred cCCCEEEEEecChhHHH-HHHHHhcCCCEEEEECCCCC---hhHHHHcCCeec---CHHHHhccCCEEEEc--cCCC-cc
Q 006212 227 LVGKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAP---ADKARAVGVELV---SFDQALATADFISLH--MPLN-PT 296 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~-vA~~lk~~G~~Vi~~d~~~~---~~~a~~~g~~~~---~l~ell~~aDvV~l~--~Plt-~~ 296 (656)
..+++|-|||.|.+|.+ +|+.|+..|++|.++|.... .+..++.|+.+. +.+.+..++|+|+.. +|.+ |+
T Consensus 17 ~~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~ 96 (524)
T 3hn7_A 17 FQGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDV 96 (524)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHH
T ss_pred ecCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHH
Confidence 45789999999999997 78889999999999997642 234556788654 345555789999875 3321 21
Q ss_pred c-------cccccHH-HHhc--CCCCcEEEEc-CCCchhcHHHHHHhHhc
Q 006212 297 T-------SKIFNDE-TFAK--MKKGVRIVNV-ARGGVIDEEALVRALDS 335 (656)
Q Consensus 297 T-------~~li~~~-~l~~--mK~gailINv-aRg~ivde~aL~~aL~~ 335 (656)
. ..++.+. .+.. +++..+|-=+ +.|+--...-+...|+.
T Consensus 97 l~~a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~ 146 (524)
T 3hn7_A 97 IEYMLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHY 146 (524)
T ss_dssp HHHHHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHH
Confidence 1 1133333 3333 3333333333 46877655555555654
No 446
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=92.56 E-value=0.19 Score=45.80 Aligned_cols=59 Identities=15% Similarity=0.283 Sum_probs=42.4
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeCCCCCHHHHHHHhcC
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVDEEPNQDSLKEIGKV 621 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D~~~~~e~l~~L~~~ 621 (656)
+.+.+..+|+||++++|.++|+++||||..+.+.... +.+++++..++ .+.+.+.|++.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~--~~~~~~~~~~d--~~~a~~~L~~~ 65 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENA--DFGILRGIVSD--PDKAYKALKDN 65 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECS--SCEEEEEEESC--HHHHHHHHHHT
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecC--CCCEEEEEeCC--HHHHHHHHHHc
Confidence 5666788999999999999999999999999886432 22455555432 24555556544
No 447
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.52 E-value=0.11 Score=56.51 Aligned_cols=109 Identities=19% Similarity=0.200 Sum_probs=67.1
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC-Ch--hHHHHcCCeec---CHHHHhccCCEEEEccCCCcc---
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA-PA--DKARAVGVELV---SFDQALATADFISLHMPLNPT--- 296 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~--~~a~~~g~~~~---~l~ell~~aDvV~l~~Plt~~--- 296 (656)
++.||+|.|||+|..|.+.|+.|+..|++|.++|.+. .. .... .|+.+. ...+.+..+|.|++.-...+.
T Consensus 2 ~~~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~gi~~~~p~ 80 (439)
T 2x5o_A 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASPGIALAHPS 80 (439)
T ss_dssp CCTTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECTTSCTTCHH
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCCCCCCCCHH
Confidence 3578999999999999999999999999999999764 21 2233 577553 124556689999886432221
Q ss_pred -------ccccccHH-HH-hcCCCCcEEEEcCCCchhcHHHHHHhHhc
Q 006212 297 -------TSKIFNDE-TF-AKMKKGVRIVNVARGGVIDEEALVRALDS 335 (656)
Q Consensus 297 -------T~~li~~~-~l-~~mK~gailINvaRg~ivde~aL~~aL~~ 335 (656)
...++.+. .+ ..++...+-|-=+.|+--...-+...|++
T Consensus 81 ~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~ 128 (439)
T 2x5o_A 81 LSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKA 128 (439)
T ss_dssp HHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHh
Confidence 11233332 12 22443334443345776555555555554
No 448
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=92.48 E-value=0.21 Score=48.38 Aligned_cols=47 Identities=13% Similarity=0.105 Sum_probs=37.0
Q ss_pred cEEEEEecCCCCchhhHHhhhhcCCccccceEeeeeccCccEEEEEEeC
Q 006212 559 NLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTFRRNHGIMAIGVD 607 (656)
Q Consensus 559 ~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~~gg~al~~i~~D 607 (656)
..|.+..+|+||+++.|++.|+++|.||-..+..... ++-++ ++.++
T Consensus 6 ~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~-~~f~m-~~~v~ 52 (195)
T 2nyi_A 6 FVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLG-GDFAM-IVLVS 52 (195)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEET-TEEEE-EEEEE
T ss_pred EEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEEC-CeEEE-EEEEE
Confidence 4567789999999999999999999999999998533 44443 44443
No 449
>3kzn_A Aotcase, N-acetylornithine carbamoyltransferase; transcarbamylase, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: KCX AOR; 1.80A {Xanthomonas campestris PV} PDB: 3kzc_A* 3kzm_A* 3kzk_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 3l05_A* 3l02_A* 3m4n_A* 3l06_A* 3l04_A*
Probab=92.47 E-value=2.3 Score=45.23 Aligned_cols=102 Identities=20% Similarity=0.153 Sum_probs=66.0
Q ss_pred hhHHhcCceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEec-------ChhHH
Q 006212 170 QAATEFGCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGF-------GKVGS 242 (656)
Q Consensus 170 ~aa~~~GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGl-------G~IG~ 242 (656)
+.|.-..|+|.|. |.+..++ .+++=++.+.++ +...++.|++++++|. .++..
T Consensus 151 ~~a~~~~vPVIN~-g~~~HPt--QaL~Dl~Ti~e~-----------------~G~~dl~g~kv~~~~~~~gd~~~~~Va~ 210 (359)
T 3kzn_A 151 SFAKYSPVPVINM-ETITHPC--QELAHALALQEH-----------------FGTPDLRGKKYVLTWTYHPKPLNTAVAN 210 (359)
T ss_dssp HHHHHCSSCEEES-SSSCCHH--HHHHHHHHHHHH-----------------HTSSCCTTCEEEEEECCCSSCCCSHHHH
T ss_pred HHHHhCCCcccCc-ccccCch--HHHHHHHHHHHH-----------------cCCccccCCeEEEEEeecCCccccchhh
Confidence 4556678999996 5444333 122223322221 1123689999999976 36888
Q ss_pred HHHHHHhcCCCEEEEECCCC---C-hh-------HHHHcCCe--e-cCHHHHhccCCEEEEcc
Q 006212 243 EVARRAKGLGMNVIAHDPYA---P-AD-------KARAVGVE--L-VSFDQALATADFISLHM 291 (656)
Q Consensus 243 ~vA~~lk~~G~~Vi~~d~~~---~-~~-------~a~~~g~~--~-~~l~ell~~aDvV~l~~ 291 (656)
+....+..+|++|..+-|.. + .+ .+.+.|.. . .++++.+++||+|..-.
T Consensus 211 S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDvvyt~r 273 (359)
T 3kzn_A 211 SALTIATRMGMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQVSHDIDSAYAGADVVYAKS 273 (359)
T ss_dssp HHHHHHHHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEEEECCHHHHHTTCSEEEEEC
T ss_pred hhHHHHHhccccEEEEecccccCCCHHHHHHHHHHHHhhCCCcccccCHHHHhcCCeEEEEEE
Confidence 99999999999999887742 1 11 12334543 2 38999999999998754
No 450
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.46 E-value=0.13 Score=53.68 Aligned_cols=45 Identities=29% Similarity=0.327 Sum_probs=36.1
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|+++.|+|. |.||..+++.++.+|.+|++.+++. ..+.+++.|.
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga 212 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA 212 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC
Confidence 4889999999 9999999999999999999998764 2333444443
No 451
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=92.43 E-value=0.091 Score=55.55 Aligned_cols=85 Identities=14% Similarity=0.188 Sum_probs=53.6
Q ss_pred CEEEEEe-cChhHHHHHHHHhcC-CCEEEEEC-CC----CChhHH------HHc-CCeec---CHHHHhccCCEEEEccC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGL-GMNVIAHD-PY----APADKA------RAV-GVELV---SFDQALATADFISLHMP 292 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~-G~~Vi~~d-~~----~~~~~a------~~~-g~~~~---~l~ell~~aDvV~l~~P 292 (656)
.+|+|+| .|.+|+.+.+.|... ++++.... +. ...... ... ...+. +.++++.++|+|++|+|
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p 84 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATA 84 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSC
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCC
Confidence 4799999 699999999999874 56776653 22 111111 110 12222 45555589999999999
Q ss_pred CCccccccccHHHHh-cCCCCcEEEEcCC
Q 006212 293 LNPTTSKIFNDETFA-KMKKGVRIVNVAR 320 (656)
Q Consensus 293 lt~~T~~li~~~~l~-~mK~gailINvaR 320 (656)
... ..+... .++.|+.+||.+.
T Consensus 85 ~~~------s~~~~~~~~~~g~~vIDlSa 107 (337)
T 3dr3_A 85 HEV------SHDLAPQFLEAGCVVFDLSG 107 (337)
T ss_dssp HHH------HHHHHHHHHHTTCEEEECSS
T ss_pred hHH------HHHHHHHHHHCCCEEEEcCC
Confidence 332 222221 2478999999984
No 452
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=92.41 E-value=0.29 Score=46.94 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=43.4
Q ss_pred ccEEEEEecCCCCchhhHHhhhhcCCccccceEeeeec------cCccEEEEEEeC--CCCCH-HHHHHHhc
Q 006212 558 GNLILCRQVDQPGMIGKVGNILGEHNVNVNFMSVGRTF------RRNHGIMAIGVD--EEPNQ-DSLKEIGK 620 (656)
Q Consensus 558 ~~~Llv~~~D~PGvIa~V~~iL~~~~INI~~m~v~r~~------~gg~al~~i~~D--~~~~~-e~l~~L~~ 620 (656)
.+.|.+..+|+||+++.|+..|+++++||.++...... ..+.-.|.+.++ ...+. ++.++|..
T Consensus 93 ~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~~~~~~~~l~~~l~~ 164 (192)
T 1u8s_A 93 TVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDA 164 (192)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEECTTSCHHHHHHHHHH
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCCCCCCHHHHHHHHHH
Confidence 35666678999999999999999999999999886443 234455555554 33333 45555553
No 453
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.38 E-value=0.3 Score=51.68 Aligned_cols=88 Identities=16% Similarity=0.088 Sum_probs=57.2
Q ss_pred cCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee-c-----CHHHHhc-----cCCEEEEccCCC
Q 006212 227 LVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-V-----SFDQALA-----TADFISLHMPLN 294 (656)
Q Consensus 227 l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~-~-----~l~ell~-----~aDvV~l~~Plt 294 (656)
-.|++|.|+|. |.+|...++.++.+|.+|++.......+.++++|+.. + ++.+.+. ..|+|+-|+...
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~ 242 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCch
Confidence 46899999999 8999999999999999999875222456677787642 1 2222221 267777666521
Q ss_pred ccccccccHHHHhcC-CCCcEEEEcC
Q 006212 295 PTTSKIFNDETFAKM-KKGVRIVNVA 319 (656)
Q Consensus 295 ~~T~~li~~~~l~~m-K~gailINva 319 (656)
. + -...+..| +++..++.++
T Consensus 243 ~-~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 243 E-S----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp H-H----HHHHHHHSCTTCEEEEESS
T ss_pred H-H----HHHHHHHhhcCCCEEEEEe
Confidence 1 1 12334456 4666777665
No 454
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.36 E-value=0.1 Score=55.86 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=59.6
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCC-EEEEECCCC-ChhHHHHcCCeecC-----H-HHHhc------cCCEEEEccCC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGM-NVIAHDPYA-PADKARAVGVELVS-----F-DQALA------TADFISLHMPL 293 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~-~Vi~~d~~~-~~~~a~~~g~~~~~-----l-~ell~------~aDvV~l~~Pl 293 (656)
.|++|.|+|.|.||...++.++.+|. +|++.|++. ..+.++++|+..++ + .+.+. ..|+|+-++..
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 48899999999999999999999999 999999765 34566677764321 1 22111 46777777653
Q ss_pred Ccc----------ccccccHHHHhcCCCCcEEEEcC
Q 006212 294 NPT----------TSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 294 t~~----------T~~li~~~~l~~mK~gailINva 319 (656)
... .... -...+..++++..++.++
T Consensus 265 ~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 265 EAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp TCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCS
T ss_pred ccccccccccccccHHH-HHHHHHHHhcCCEEEEec
Confidence 210 0001 134455667777777665
No 455
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.34 E-value=0.78 Score=50.73 Aligned_cols=90 Identities=22% Similarity=0.336 Sum_probs=56.7
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhcCCCEEEE--------ECCCC-ChhHHH----HcC-------CeecCHHHHh-ccC
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKGLGMNVIA--------HDPYA-PADKAR----AVG-------VELVSFDQAL-ATA 284 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~--------~d~~~-~~~~a~----~~g-------~~~~~l~ell-~~a 284 (656)
+|.|+||.|-|+|++|+..|+.|...|.+|++ |||.- +.+... +.| .+.++ ++++ .+|
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g~i~~~~~a~~~~-~~il~~~~ 319 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYE-GSILEVDC 319 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHSSSTTCTTSEEEC-SCGGGSCC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcCCeecccCceeec-cccccccc
Confidence 58999999999999999999999999999987 45542 322211 111 11221 1222 467
Q ss_pred CEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCc
Q 006212 285 DFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGG 322 (656)
Q Consensus 285 DvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~ 322 (656)
|+.+-|.- .+.|+.+....++ -.+|+-.|-+.
T Consensus 320 DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p 351 (501)
T 3mw9_A 320 DILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGP 351 (501)
T ss_dssp SEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSC
T ss_pred eEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCc
Confidence 77776653 3456666666664 23555555555
No 456
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.31 E-value=0.071 Score=55.58 Aligned_cols=35 Identities=31% Similarity=0.352 Sum_probs=32.1
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA 262 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~ 262 (656)
.|+++.|+|. |.||..+++.++..|.+|++.+++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~ 190 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK 190 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5899999997 9999999999999999999998764
No 457
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=92.19 E-value=0.27 Score=50.89 Aligned_cols=109 Identities=14% Similarity=0.130 Sum_probs=62.9
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCCC--EEEEECC--CCChhH--HHHc--------CCeec-CHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLGM--NVIAHDP--YAPADK--ARAV--------GVELV-SFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G~--~Vi~~d~--~~~~~~--a~~~--------g~~~~-~l~ell~~aDvV~l~~Pl 293 (656)
.+|+|+| .|.+|..++..|...|. ++..+|. ...... +.++ .+... +-.+.++.||+|+++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 3799999 99999999999876664 7888997 431100 1110 11111 225678999999999874
Q ss_pred Cccccccc-------c----H---HHHhcCCCCcEEEEcCCCchhc--HHHHHHh--HhcCCeEEE
Q 006212 294 NPTTSKIF-------N----D---ETFAKMKKGVRIVNVARGGVID--EEALVRA--LDSGVVAQA 341 (656)
Q Consensus 294 t~~T~~li-------~----~---~~l~~mK~gailINvaRg~ivd--e~aL~~a--L~~g~i~gA 341 (656)
.. ..++- | . +.+....+.+++++++ ..+| ...+.+. +...++.|.
T Consensus 81 ~~-~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~S--NPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 81 PR-QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS--NPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp CC-CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECC--SSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHHHHcCCCHHHeeec
Confidence 32 22221 1 1 1222346788999874 4444 2333332 333466665
No 458
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=92.15 E-value=0.23 Score=51.47 Aligned_cols=96 Identities=18% Similarity=0.124 Sum_probs=57.7
Q ss_pred CEEEEEecChhHHHHHHHHhcCC--CEEEEECCCCC--hhHHHHc-------CC--ee--cCHHHHhccCCEEEEccC--
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG--MNVIAHDPYAP--ADKARAV-------GV--EL--VSFDQALATADFISLHMP-- 292 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G--~~Vi~~d~~~~--~~~a~~~-------g~--~~--~~l~ell~~aDvV~l~~P-- 292 (656)
.+|+|||.|.||+++|..|+..+ -++..||.... ...+.++ +. .. .+--+.+++||+|++..-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~p 80 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGLA 80 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCCC
Confidence 47999999999999999887544 48999997642 1122221 11 11 122357899999999874
Q ss_pred CCc-cccc-cc--cHH-------HHhcCCCCcEEEEcCCCchhcHH
Q 006212 293 LNP-TTSK-IF--NDE-------TFAKMKKGVRIVNVARGGVIDEE 327 (656)
Q Consensus 293 lt~-~T~~-li--~~~-------~l~~mK~gailINvaRg~ivde~ 327 (656)
..| .||. ++ |.+ .+.+-.|+++++.++ ..+|.-
T Consensus 81 rkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs--NPvd~~ 124 (294)
T 2x0j_A 81 RKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVM 124 (294)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec--Ccchhh
Confidence 222 1222 11 211 222346778888875 445533
No 459
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=92.11 E-value=0.18 Score=54.78 Aligned_cols=87 Identities=21% Similarity=0.195 Sum_probs=62.5
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec-CH------------------------HH-
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV-SF------------------------DQ- 279 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~-~l------------------------~e- 279 (656)
.|++|.|+|. |.||...++.++..|.+|++.++.. ..+.++++|...+ +. ++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 5899999998 9999999999999999999987654 3456677776421 21 11
Q ss_pred --Hh-ccCCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006212 280 --AL-ATADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 280 --ll-~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaR 320 (656)
+. ...|+|+-++.. + .-...+..|+++..+++++.
T Consensus 300 ~~~~g~g~Dvvid~~G~-~-----~~~~~~~~l~~~G~iv~~G~ 337 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGR-V-----TFGLSVIVARRGGTVVTCGS 337 (447)
T ss_dssp HHHHSSCCSEEEECSCH-H-----HHHHHHHHSCTTCEEEESCC
T ss_pred HHHhCCCceEEEECCCc-h-----HHHHHHHHHhcCCEEEEEec
Confidence 11 247888887762 1 12455667888888888873
No 460
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.08 E-value=0.11 Score=53.85 Aligned_cols=45 Identities=27% Similarity=0.274 Sum_probs=35.8
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|+++.|.| .|.||..+++.++..|.+|++.++.. ..+.+++.|.
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~ 186 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA 186 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 489999999 79999999999999999999998764 2233444443
No 461
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=92.05 E-value=0.22 Score=52.09 Aligned_cols=85 Identities=16% Similarity=0.165 Sum_probs=57.1
Q ss_pred CCEEEEE-ecChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCCeec------CHHHHh------ccCCEEEEccCCC
Q 006212 229 GKTLAVM-GFGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGVELV------SFDQAL------ATADFISLHMPLN 294 (656)
Q Consensus 229 gktvGII-GlG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~~~~------~l~ell------~~aDvV~l~~Plt 294 (656)
++++.|. |.|.||...++.++.+|.+|++.+++. ..+.++++|...+ ++.+.+ ...|+|+-|+...
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~ 244 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGP 244 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCCh
Confidence 3677665 999999999999999999999998765 4566777776321 222221 2477777766521
Q ss_pred ccccccccHHHHhcCCCCcEEEEcC
Q 006212 295 PTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 295 ~~T~~li~~~~l~~mK~gailINva 319 (656)
. . ...+..|+++..++.++
T Consensus 245 -~----~-~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 245 -L----A-SAIFNAMPKRARWIIYG 263 (349)
T ss_dssp -H----H-HHHHHHSCTTCEEEECC
T ss_pred -h----H-HHHHhhhcCCCEEEEEe
Confidence 1 1 44556677777777765
No 462
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=91.98 E-value=0.088 Score=56.82 Aligned_cols=86 Identities=14% Similarity=0.187 Sum_probs=55.6
Q ss_pred CEEEEEecChhHHHHHHHHhcCC---CEEEEECCCCCh-h-HHHHc------CCee--------cCHHHHhcc--CCEEE
Q 006212 230 KTLAVMGFGKVGSEVARRAKGLG---MNVIAHDPYAPA-D-KARAV------GVEL--------VSFDQALAT--ADFIS 288 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~G---~~Vi~~d~~~~~-~-~a~~~------g~~~--------~~l~ell~~--aDvV~ 288 (656)
++|+|+|.|.||+.+++.|...| .+|.++|++... + .+.+. .+.. .++++++++ +|+|+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 58999999999999999999887 499999987522 1 12221 1221 136677877 89999
Q ss_pred EccCCCccccccccHHHHhcCCCCcEEEEcCC
Q 006212 289 LHMPLNPTTSKIFNDETFAKMKKGVRIVNVAR 320 (656)
Q Consensus 289 l~~Plt~~T~~li~~~~l~~mK~gailINvaR 320 (656)
.++|... ...++ + ..++.|.-++|++.
T Consensus 82 n~ag~~~-~~~v~-~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQ-DLTIM-E---ACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGG-HHHHH-H---HHHHHTCCEEESSC
T ss_pred ECCCccc-ChHHH-H---HHHHhCCCEEEecC
Confidence 9988332 11111 1 22355666777653
No 463
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.89 E-value=0.11 Score=46.74 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=63.9
Q ss_pred CEEEEEec----ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee-cCHHHHhccCCEEEEccCCCccccccccHH
Q 006212 230 KTLAVMGF----GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL-VSFDQALATADFISLHMPLNPTTSKIFNDE 304 (656)
Q Consensus 230 ktvGIIGl----G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~ 304 (656)
|+|+|||. |..|..+.+.|+.+|++|+..+|.... -.|... -++.++-. -|++++++| .+.+..++.+-
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~----i~G~~~y~sl~dlp~-vDlavi~~p-~~~v~~~v~e~ 78 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE----VLGKTIINERPVIEG-VDTVTLYIN-PQNQLSEYNYI 78 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE----ETTEECBCSCCCCTT-CCEEEECSC-HHHHGGGHHHH
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc----CCCeeccCChHHCCC-CCEEEEEeC-HHHHHHHHHHH
Confidence 68999998 569999999999999999999987421 135443 36777766 999999999 33445555332
Q ss_pred HHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 305 TFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 305 ~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
. .+...++++.-+ ..+ +++.+..++..+
T Consensus 79 -~-~~g~k~v~~~~G---~~~-~e~~~~a~~~Gi 106 (122)
T 3ff4_A 79 -L-SLKPKRVIFNPG---TEN-EELEEILSENGI 106 (122)
T ss_dssp -H-HHCCSEEEECTT---CCC-HHHHHHHHHTTC
T ss_pred -H-hcCCCEEEECCC---CCh-HHHHHHHHHcCC
Confidence 2 234446666543 233 455555555434
No 464
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=91.84 E-value=0.25 Score=54.60 Aligned_cols=65 Identities=12% Similarity=0.131 Sum_probs=44.5
Q ss_pred CCEEEEEecChh-HHHHHHHHhcC-----CCEEEEECCCCCh-h----HHH----HcC----Cee-cCHHHHhccCCEEE
Q 006212 229 GKTLAVMGFGKV-GSEVARRAKGL-----GMNVIAHDPYAPA-D----KAR----AVG----VEL-VSFDQALATADFIS 288 (656)
Q Consensus 229 gktvGIIGlG~I-G~~vA~~lk~~-----G~~Vi~~d~~~~~-~----~a~----~~g----~~~-~~l~ell~~aDvV~ 288 (656)
.++|+|||.|.. |.++|..|... +.+|..||..... + ... ..+ +.. .++++.++.||+|+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VV 107 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 107 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEE
Confidence 458999999998 55566555433 5689999987521 1 011 112 122 37889999999999
Q ss_pred EccCC
Q 006212 289 LHMPL 293 (656)
Q Consensus 289 l~~Pl 293 (656)
+++|.
T Consensus 108 iaag~ 112 (472)
T 1u8x_X 108 AHIRV 112 (472)
T ss_dssp ECCCT
T ss_pred EcCCC
Confidence 99985
No 465
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.80 E-value=0.23 Score=51.02 Aligned_cols=105 Identities=12% Similarity=0.092 Sum_probs=70.0
Q ss_pred cCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccCCCc----------
Q 006212 227 LVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMPLNP---------- 295 (656)
Q Consensus 227 l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~Plt~---------- 295 (656)
+.|++|.|+|-......+++.|...|++|..+.... +.....|.... ++.+.++++|+|+...|...
T Consensus 5 ~~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~ii~~~~~~~~~~~i~s~~a 82 (300)
T 2rir_A 5 LTGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQ--LDHGFTGAVKCNIDEIPFQQIDSIILPVSATTGEGVVSTVFS 82 (300)
T ss_dssp CCSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTT--SSCCCTTEEECCGGGSCGGGCSEEECCSSCEETTTEECBSSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccc--cccccccceeccchHHHHhcCCEEEeccccccCCcccccccc
Confidence 568899999999999999999999999998774211 11112233333 46677889999987554321
Q ss_pred cccccccHHHHhcCCCCcEEEEcCCCchhcHHHHHHhHhcCCe
Q 006212 296 TTSKIFNDETFAKMKKGVRIVNVARGGVIDEEALVRALDSGVV 338 (656)
Q Consensus 296 ~T~~li~~~~l~~mK~gailINvaRg~ivde~aL~~aL~~g~i 338 (656)
.+...++++.++.++++.+|. ++ + |..++.+++.+..|
T Consensus 83 ~~~~~~~~~~l~~~~~l~~i~-~g---~-~~~d~~~~~~~~gi 120 (300)
T 2rir_A 83 NEEVVLKQDHLDRTPAHCVIF-SG---I-SNAYLENIAAQAKR 120 (300)
T ss_dssp SSCEECCHHHHHTSCTTCEEE-ES---S-CCHHHHHHHHHTTC
T ss_pred cCCccchHHHHhhcCCCCEEE-Ee---c-CCHHHHHHHHHCCC
Confidence 123347888999999988887 33 3 55554444554444
No 466
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.80 E-value=0.11 Score=54.41 Aligned_cols=64 Identities=17% Similarity=0.160 Sum_probs=46.5
Q ss_pred CEEEEEe-cChhHHHHHHHHhcCC--CEEEEECCCCChhHHHHc---CC----ee----cCHHHHhccCCEEEEccCC
Q 006212 230 KTLAVMG-FGKVGSEVARRAKGLG--MNVIAHDPYAPADKARAV---GV----EL----VSFDQALATADFISLHMPL 293 (656)
Q Consensus 230 ktvGIIG-lG~IG~~vA~~lk~~G--~~Vi~~d~~~~~~~a~~~---g~----~~----~~l~ell~~aDvV~l~~Pl 293 (656)
.+|+|+| .|.+|..++..|...| .+|..+|.......+.++ .. .. .++.+.++.||+|+++.+.
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~ 86 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV 86 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence 5899999 8999999999998777 789999865432222111 11 11 1467889999999999873
No 467
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=91.77 E-value=0.16 Score=49.61 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=47.4
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHhcCCC--EEEEECCCCC-hhHHHHcCCee--------cCHHHHhccCCEEEEccCC
Q 006212 227 LVGKTLAVMG-FGKVGSEVARRAKGLGM--NVIAHDPYAP-ADKARAVGVEL--------VSFDQALATADFISLHMPL 293 (656)
Q Consensus 227 l~gktvGIIG-lG~IG~~vA~~lk~~G~--~Vi~~d~~~~-~~~a~~~g~~~--------~~l~ell~~aDvV~l~~Pl 293 (656)
+.+|++.|.| .|.||+.+++.|...|. +|++.++... .......++.. .+++++++.+|+|+.+...
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~ 94 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 94 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence 5689999999 69999999999998899 9999887642 11111112221 1345667788998887764
No 468
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.76 E-value=0.15 Score=53.63 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=35.4
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVG 271 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g 271 (656)
.|+++.|+| .|.||..+++.++..|.+|++.++.. ..+.+++.|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g 207 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLG 207 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC
Confidence 489999999 79999999999999999999998764 223334444
No 469
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=91.75 E-value=0.15 Score=53.67 Aligned_cols=105 Identities=19% Similarity=0.249 Sum_probs=61.2
Q ss_pred CEEEEEecChhHHHHHHHHhcC--------CCEEEE-ECCCCCh-hH-------HH---HcCCe-e-c---CHHHHh-cc
Q 006212 230 KTLAVMGFGKVGSEVARRAKGL--------GMNVIA-HDPYAPA-DK-------AR---AVGVE-L-V---SFDQAL-AT 283 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~~--------G~~Vi~-~d~~~~~-~~-------a~---~~g~~-~-~---~l~ell-~~ 283 (656)
-+|||||+|.||+.+++.++.. +++|.+ +|+.... .. +. ..++. + . ++++++ .+
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~~~ 86 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALARD 86 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHHSS
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhCCC
Confidence 3799999999999999988643 367654 5765411 10 11 11321 1 2 788887 46
Q ss_pred CCEEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh-cHHHHHHhHhc
Q 006212 284 ADFISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI-DEEALVRALDS 335 (656)
Q Consensus 284 aDvV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv-de~aL~~aL~~ 335 (656)
.|+|+.|+|.. .+...--+-....|+.|.-++-+-...+. ..+.|.++.++
T Consensus 87 iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~ 138 (331)
T 3c8m_A 87 FDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARS 138 (331)
T ss_dssp CSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHH
Confidence 89999999954 22221112233446667666655444442 24555554444
No 470
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=91.75 E-value=1.1 Score=49.18 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=90.4
Q ss_pred CceeecCCCCChhhHHHHHHHHHHHHHhchhHHHHHHHccccccccccccccCCCEEEEEecChhHHHHHHHHhcCCC--
Q 006212 176 GCLVVNAPIANTVAAAEHGIALLASMARNVSQADASIKAGKWLRSKYVGVSLVGKTLAVMGFGKVGSEVARRAKGLGM-- 253 (656)
Q Consensus 176 GI~V~n~p~~n~~~vAE~~lal~L~~~R~i~~~~~~~~~g~W~~~~~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~-- 253 (656)
.|.|.|.- -.-+|=-+++-+++.+| ..|..|...+|.|.|.|.-|-.+|+.+...|+
T Consensus 187 ~ipvFnDD---~qGTA~V~lAgllnAlk------------------i~gk~l~d~riV~~GAGaAGigia~ll~~~G~~~ 245 (487)
T 3nv9_A 187 DIPVWHDD---QQGTASVTLAGLLNALK------------------LVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADP 245 (487)
T ss_dssp SSCEEETT---THHHHHHHHHHHHHHHH------------------HHTCCGGGCCEEEECCSHHHHHHHHHHHHTTCCG
T ss_pred cCCccccc---cchHHHHHHHHHHHHHH------------------HhCCChhhcEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 79999985 34455567777777776 34678889999999999999999999999998
Q ss_pred -EEEEECCCC----Ch-hH------------HHHcCC-eecCHHHHhccCCEEEEccCCCccccccccHHHHhcCCCCcE
Q 006212 254 -NVIAHDPYA----PA-DK------------ARAVGV-ELVSFDQALATADFISLHMPLNPTTSKIFNDETFAKMKKGVR 314 (656)
Q Consensus 254 -~Vi~~d~~~----~~-~~------------a~~~g~-~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mK~gai 314 (656)
+|+.+|..- .. +. +....- ...+|.|+++.+|+++=+- .. .-+.+.++.++.|.+.++
T Consensus 246 ~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n~~~~~~L~eav~~adVlIG~S-~~--~pg~ft~e~V~~Ma~~PI 322 (487)
T 3nv9_A 246 KKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLS-TP--GPGVVKAEWIKSMGEKPI 322 (487)
T ss_dssp GGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSCTTCCCSHHHHHTTCSEEEECC-CS--SCCCCCHHHHHTSCSSCE
T ss_pred ccEEEEeccccccCCcchhhhhcccHHHHHHHHhcccccCCCHHHHHhcCCEEEEec-cc--CCCCCCHHHHHhhcCCCE
Confidence 799988651 11 11 111111 2347999999999775433 11 146899999999999999
Q ss_pred EEEcCCC
Q 006212 315 IVNVARG 321 (656)
Q Consensus 315 lINvaRg 321 (656)
|.-.+.-
T Consensus 323 IFaLSNP 329 (487)
T 3nv9_A 323 VFCCANP 329 (487)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 9999854
No 471
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=91.74 E-value=0.24 Score=48.20 Aligned_cols=67 Identities=16% Similarity=0.107 Sum_probs=46.9
Q ss_pred cCCCEEEEEe-cChhHHHHHHHHhcC--CCEEEEECCCCChhHHHHcCCee-----c---CHHHHhccCCEEEEccCC
Q 006212 227 LVGKTLAVMG-FGKVGSEVARRAKGL--GMNVIAHDPYAPADKARAVGVEL-----V---SFDQALATADFISLHMPL 293 (656)
Q Consensus 227 l~gktvGIIG-lG~IG~~vA~~lk~~--G~~Vi~~d~~~~~~~a~~~g~~~-----~---~l~ell~~aDvV~l~~Pl 293 (656)
..+|++.|.| .|.||+.+++.|... |++|++.++..........++.. . +++++++.+|+|+.+...
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 3578999998 699999999999987 89999998764211111112221 1 355678888998877653
No 472
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=91.73 E-value=0.18 Score=55.36 Aligned_cols=62 Identities=16% Similarity=0.197 Sum_probs=0.0
Q ss_pred EEEEEecChhHHHHHHHHhc----------CCCEEEE-ECCCCChhHHHHcCCeec-CHHHHhc--cCCEEEEccC
Q 006212 231 TLAVMGFGKVGSEVARRAKG----------LGMNVIA-HDPYAPADKARAVGVELV-SFDQALA--TADFISLHMP 292 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~----------~G~~Vi~-~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~P 292 (656)
+|||||+|.||+.+++.++. .+++|.+ +|++.........+..+. ++++++. +.|+|+.|+|
T Consensus 12 rIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp 87 (444)
T 3mtj_A 12 HVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIG 87 (444)
T ss_dssp EEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCC
No 473
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=91.73 E-value=0.27 Score=52.37 Aligned_cols=134 Identities=16% Similarity=0.222 Sum_probs=88.3
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeecCHHHHhccCCEEEEccCCCccccccccHHHHhc
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELVSFDQALATADFISLHMPLNPTTSKIFNDETFAK 308 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~ 308 (656)
--++.|+|.|.+|+++|+.++.+|++|.++|++..... .+-++.+|-++..-| .+.+..
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~~-----------~~~fp~a~~v~~~~p----------~~~~~~ 257 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCE-----------KHFFPDADEIIVDFP----------ADFLRK 257 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGGC-----------GGGCTTCSEEEESCH----------HHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCccccc-----------cccCCCceEEecCCH----------HHHHhh
Confidence 34799999999999999999999999999998742110 112355665554444 223333
Q ss_pred --CCCCcEEEEcCCCchhcHHHHHHhHhcC--CeEEEEeec-----cCCCCCCCCCccccCCcEEEcC---CCCCCcHHH
Q 006212 309 --MKKGVRIVNVARGGVIDEEALVRALDSG--VVAQAALDV-----FTEEPPAKDSKLVQHENVTVTP---HLGASTKEA 376 (656)
Q Consensus 309 --mK~gailINvaRg~ivde~aL~~aL~~g--~i~gA~lDV-----~~~EP~~~~~~L~~~~nvilTP---H~g~~T~ea 376 (656)
+.+++.++=+.++.-.|...|..+|+.. .|+-.|+-. ....- ...+ |-+| .+|+.|+
T Consensus 258 ~~~~~~t~vvv~TH~h~~D~~~L~~aL~~~~~YiG~iGSr~R~~rl~~~g~--------~~~r-i~~PIGL~Iga~tP-- 326 (362)
T 3on5_A 258 FLIRPDDFVLIMTHHFQKDQEILHFLLEKELRYIGILGSKERTRRLLQNRK--------PPDH-LYSPVGLSIDAQGP-- 326 (362)
T ss_dssp SCCCTTCEEEECCSCHHHHHHHHHHHSSSCCSEEEESSCHHHHHHHHTSCC--------CCTT-EESSCSCCSCCCSH--
T ss_pred cCCCCCeEEEEEeCCchhhHHHHHHHhcCCCCEEEEeCCHHHHHHHHhcCC--------cHhh-eECCCCCCCCCCCH--
Confidence 5678888888888888888888888764 333223221 11110 0122 4555 3667887
Q ss_pred HHHHHHHHHHHHHHHHcCC
Q 006212 377 QEGVAIEIAEAVVGALRGE 395 (656)
Q Consensus 377 ~~~~~~~~~~~i~~~l~g~ 395 (656)
+.++..++.+|....++.
T Consensus 327 -~EIAvSI~AEiia~~~~~ 344 (362)
T 3on5_A 327 -EEIAISIVAQLIQLIRSR 344 (362)
T ss_dssp -HHHHHHHHHHHHHHHHHS
T ss_pred -HHHHHHHHHHHHHHHhCC
Confidence 466788888888888776
No 474
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=91.72 E-value=0.17 Score=53.32 Aligned_cols=29 Identities=31% Similarity=0.582 Sum_probs=25.0
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEEEC
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAHD 259 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~~d 259 (656)
+|||+|+|+||+.+.+.+... .++|.+.+
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain 32 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVN 32 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEe
Confidence 799999999999999998765 68887653
No 475
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.67 E-value=0.17 Score=45.61 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=44.8
Q ss_pred CCEEEEEecChhHHHHHHHHhcC-CCEEEEE-CCCCChhHHHHcCCeec---CHHHHhc--cCCEEEEccCCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGL-GMNVIAH-DPYAPADKARAVGVELV---SFDQALA--TADFISLHMPLN 294 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~-G~~Vi~~-d~~~~~~~a~~~g~~~~---~l~ell~--~aDvV~l~~Plt 294 (656)
.+++.|+|.|..|+.+++.++.. |+++++| |.........-.|+.+. ++.++++ ..|.|++++|..
T Consensus 4 ~~~vlIiGaG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 4 KKKVLIYGAGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEEEEeCCCC
Confidence 56899999999999999999854 8999885 65431110011244433 4555554 578999999954
No 476
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=91.60 E-value=0.25 Score=52.22 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=37.8
Q ss_pred CCCEEEEEe-cChhHHHHHHHHhc-CCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMG-FGKVGSEVARRAKG-LGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIG-lG~IG~~vA~~lk~-~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|++|.|+| .|.+|...++.++. .|.+|++.++.. ..+.++++|+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa 218 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA 218 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC
Confidence 588999999 99999999999997 599999999865 4455666765
No 477
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.56 E-value=0.19 Score=51.75 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=45.9
Q ss_pred ccccCCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCee--------cCHHHHhccCCEEEEccCCC
Q 006212 224 GVSLVGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVEL--------VSFDQALATADFISLHMPLN 294 (656)
Q Consensus 224 g~~l~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~--------~~l~ell~~aDvV~l~~Plt 294 (656)
..+..+|+|.|.|. |.||+.+++.|...|++|++.++.... .++.. .+++++++.+|+|+-+....
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 35688999999997 999999999999999999999876532 22221 13567788999998776543
No 478
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=91.54 E-value=0.15 Score=53.22 Aligned_cols=46 Identities=30% Similarity=0.379 Sum_probs=38.7
Q ss_pred CCCEEEEEecChhHHHHHHHHhcC-CCEEEEECCCC-ChhHHHHcCCe
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGL-GMNVIAHDPYA-PADKARAVGVE 273 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~-G~~Vi~~d~~~-~~~~a~~~g~~ 273 (656)
.|.+|.|+|.|.+|...++.++.+ |.+|++.|+.. ..+.++++|+.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~ 218 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGAD 218 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCC
Confidence 488999999999999999999987 78999998775 45667777763
No 479
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=91.47 E-value=0.11 Score=53.67 Aligned_cols=100 Identities=19% Similarity=0.262 Sum_probs=61.3
Q ss_pred EEEEEec-ChhHHHHHHHHhcCCCEEE-EECCCCChhHHHHcCCeec-CHHHHhc--cCCEEEEccCCCccccccccHHH
Q 006212 231 TLAVMGF-GKVGSEVARRAKGLGMNVI-AHDPYAPADKARAVGVELV-SFDQALA--TADFISLHMPLNPTTSKIFNDET 305 (656)
Q Consensus 231 tvGIIGl-G~IG~~vA~~lk~~G~~Vi-~~d~~~~~~~a~~~g~~~~-~l~ell~--~aDvV~l~~Plt~~T~~li~~~~ 305 (656)
++.|+|. |++|+.+++.++..|++++ ..+|....+. -.|+... +++++.. .+|++++++|. +.+...+ ++.
T Consensus 15 ~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp~-~~~~~~v-~ea 90 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVPA-PFAKDAV-FEA 90 (294)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCH-HHHHHHH-HHH
T ss_pred EEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccCH-HHHHHHH-HHH
Confidence 4778899 9999999999998888733 5676532111 1466544 7999988 89999999992 2233332 222
Q ss_pred HhcCCCCcEEEEcCCC-chhcHHHHHHhHhcC
Q 006212 306 FAKMKKGVRIVNVARG-GVIDEEALVRALDSG 336 (656)
Q Consensus 306 l~~mK~gailINvaRg-~ivde~aL~~aL~~g 336 (656)
.+ .+... +|..+.| ..-+++.+.++.++.
T Consensus 91 ~~-~Gi~~-vVi~t~G~~~~~~~~l~~~A~~~ 120 (294)
T 2yv1_A 91 ID-AGIEL-IVVITEHIPVHDTMEFVNYAEDV 120 (294)
T ss_dssp HH-TTCSE-EEECCSCCCHHHHHHHHHHHHHH
T ss_pred HH-CCCCE-EEEECCCCCHHHHHHHHHHHHHc
Confidence 22 22222 4444433 222455676666653
No 480
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=91.41 E-value=0.26 Score=49.74 Aligned_cols=64 Identities=23% Similarity=0.365 Sum_probs=47.2
Q ss_pred CCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCCC----hhHH------HHcCCeec--------CHHHHhccCCEEEE
Q 006212 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYAP----ADKA------RAVGVELV--------SFDQALATADFISL 289 (656)
Q Consensus 229 gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~~----~~~a------~~~g~~~~--------~l~ell~~aDvV~l 289 (656)
.++|.|.|. |.||+.+++.|...|++|++.++... .+.+ ...|++.+ ++.++++.+|+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 478999996 99999999999999999999987642 1111 12355432 25567888999988
Q ss_pred ccC
Q 006212 290 HMP 292 (656)
Q Consensus 290 ~~P 292 (656)
+++
T Consensus 84 ~a~ 86 (308)
T 1qyc_A 84 TVG 86 (308)
T ss_dssp CCC
T ss_pred CCc
Confidence 776
No 481
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=91.40 E-value=0.2 Score=52.79 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=25.4
Q ss_pred EEEEEecChhHHHHHHHHhcC-CCEEEEECC
Q 006212 231 TLAVMGFGKVGSEVARRAKGL-GMNVIAHDP 260 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~-G~~Vi~~d~ 260 (656)
+|||+|+|+||+.+.+.+... .++|.+.+-
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~ 33 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAIND 33 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcC
Confidence 799999999999999998865 578877643
No 482
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.37 E-value=0.12 Score=52.00 Aligned_cols=62 Identities=19% Similarity=0.315 Sum_probs=45.0
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec--------CHHHHhcc-CCEEEEccC
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV--------SFDQALAT-ADFISLHMP 292 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~--------~l~ell~~-aDvV~l~~P 292 (656)
.+++|.|.|.|.||+.+++.|...|++|++.++..... ..++.++ +++++++. +|+|+-+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM---PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC---CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc---ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 46789999999999999999999999999998764221 1223221 23455666 999877664
No 483
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=91.35 E-value=0.3 Score=49.28 Aligned_cols=64 Identities=27% Similarity=0.237 Sum_probs=47.9
Q ss_pred CCEEEEEec-ChhHHHHHHHHhcCC-CEEEEECCCCChh---HHHHcCCeec--------CHHHHhccCCEEEEccC
Q 006212 229 GKTLAVMGF-GKVGSEVARRAKGLG-MNVIAHDPYAPAD---KARAVGVELV--------SFDQALATADFISLHMP 292 (656)
Q Consensus 229 gktvGIIGl-G~IG~~vA~~lk~~G-~~Vi~~d~~~~~~---~a~~~g~~~~--------~l~ell~~aDvV~l~~P 292 (656)
.|+|.|.|. |.||+.+++.|...| ++|.+.++..... .....+++.+ ++.++++.+|+|+.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 578999997 999999999999878 9999988765321 1223455432 25567889999988775
No 484
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=91.34 E-value=0.24 Score=51.97 Aligned_cols=105 Identities=17% Similarity=0.259 Sum_probs=61.7
Q ss_pred CEEEEEecChhHHHHHHHHhc-------CCCEEEE-ECCCCC-------hh----HHHHcC-Ce--ecCHHHHhc--cCC
Q 006212 230 KTLAVMGFGKVGSEVARRAKG-------LGMNVIA-HDPYAP-------AD----KARAVG-VE--LVSFDQALA--TAD 285 (656)
Q Consensus 230 ktvGIIGlG~IG~~vA~~lk~-------~G~~Vi~-~d~~~~-------~~----~a~~~g-~~--~~~l~ell~--~aD 285 (656)
-+|||+|+|.||+.+++.+.. .+++|.+ +|+... .. ...+.| +. ..+.++++. +.|
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~iD 84 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAAD 84 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCCS
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCCC
Confidence 369999999999999999875 3567666 455421 11 122234 21 126677774 589
Q ss_pred EEEEccCCCccccccccHHHHhcCCCCcEEEEcCCCchh-cHHHHHHhHhc
Q 006212 286 FISLHMPLNPTTSKIFNDETFAKMKKGVRIVNVARGGVI-DEEALVRALDS 335 (656)
Q Consensus 286 vV~l~~Plt~~T~~li~~~~l~~mK~gailINvaRg~iv-de~aL~~aL~~ 335 (656)
+|+.|+|... ..+---+.....|+.|.-+|-+-.+.+. ..+.|.++.++
T Consensus 85 vVVe~T~~~~-~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~ 134 (325)
T 3ing_A 85 LLVDCTPASR-DGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQ 134 (325)
T ss_dssp EEEECCCCCS-SSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCcc-ccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHH
Confidence 9999999431 1100012234446777777766555443 34556555444
No 485
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.30 E-value=0.18 Score=52.34 Aligned_cols=44 Identities=27% Similarity=0.388 Sum_probs=35.3
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVG 271 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g 271 (656)
.|+++.|.|. |.||..+++.++..|.+|++.++.. ..+.+++.|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g 190 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG 190 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC
Confidence 4889999995 9999999999999999999998764 233344444
No 486
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.13 E-value=0.37 Score=50.44 Aligned_cols=64 Identities=16% Similarity=-0.018 Sum_probs=46.1
Q ss_pred CEEEEEec-ChhHHHHHHHHhcCCC-------EEEEECCC----CC-h-hHH--HHcC---C----e-ecCHHHHhccCC
Q 006212 230 KTLAVMGF-GKVGSEVARRAKGLGM-------NVIAHDPY----AP-A-DKA--RAVG---V----E-LVSFDQALATAD 285 (656)
Q Consensus 230 ktvGIIGl-G~IG~~vA~~lk~~G~-------~Vi~~d~~----~~-~-~~a--~~~g---~----~-~~~l~ell~~aD 285 (656)
++|.|+|. |.+|+.++..|...|+ +|..+|.. .. . ..+ ...+ + . ..++.+.++.||
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~aD 85 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDAD 85 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCCC
Confidence 58999997 9999999999987775 89999986 21 1 001 1111 1 1 136889999999
Q ss_pred EEEEccCC
Q 006212 286 FISLHMPL 293 (656)
Q Consensus 286 vV~l~~Pl 293 (656)
+|+++...
T Consensus 86 ~Vi~~ag~ 93 (329)
T 1b8p_A 86 VALLVGAR 93 (329)
T ss_dssp EEEECCCC
T ss_pred EEEEeCCC
Confidence 99988763
No 487
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.10 E-value=0.12 Score=54.01 Aligned_cols=45 Identities=31% Similarity=0.465 Sum_probs=36.2
Q ss_pred CCCEEEEEecC-hhHHHHHHHHhcC-CCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGFG-KVGSEVARRAKGL-GMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGlG-~IG~~vA~~lk~~-G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|+++.|+|.| .||..+++.++.. |.+|++.|++. ..+.+++.|.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~ 217 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA 217 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence 47899999999 9999999999988 99999998764 2334444443
No 488
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=91.09 E-value=0.21 Score=55.15 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=28.1
Q ss_pred ccCCCEEEEEecChhHHHHHHHHhc-CCC---EEEEECCCC
Q 006212 226 SLVGKTLAVMGFGKVGSEVARRAKG-LGM---NVIAHDPYA 262 (656)
Q Consensus 226 ~l~gktvGIIGlG~IG~~vA~~lk~-~G~---~Vi~~d~~~ 262 (656)
.+.+ +|.|||+|.||+.+|+.+.. .++ +|+..|+..
T Consensus 11 ~~~~-rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 11 LFKN-RFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred cCCC-CEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 3444 58899999999999998864 565 688888764
No 489
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.95 E-value=0.36 Score=51.99 Aligned_cols=66 Identities=15% Similarity=0.067 Sum_probs=51.8
Q ss_pred ccCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccC
Q 006212 226 SLVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMP 292 (656)
Q Consensus 226 ~l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~P 292 (656)
.+.|++|+|+|+-- =...+++.|+..|.+|.+|||...... ...+..++ +++++++.||+|+++..
T Consensus 306 ~~~~~~v~vlGlafK~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~-~~~~~~~~~~~~~~~~~~d~~v~~~~ 382 (402)
T 1dlj_A 306 ESPVKVVGVYRLIMKSNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLE-SEDQSVLVNDLENFKKQANIIVTNRY 382 (402)
T ss_dssp CCSSCEEEEECCCSSTTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCC-TTCCSEECCCHHHHHHHCSEEECSSC
T ss_pred CCCCCEEEEEeeeccCCCcccccChHHHHHHHHHHCCCEEEEECCCCChHH-HHcCCeecCCHHHHHhCCcEEEEecC
Confidence 68999999999853 466799999999999999999863221 11344444 68999999999999776
No 490
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=90.94 E-value=0.23 Score=50.11 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=46.9
Q ss_pred CCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC----Ch-hHH------HHcCCeec--------CHHHHhccCCEEE
Q 006212 229 GKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA----PA-DKA------RAVGVELV--------SFDQALATADFIS 288 (656)
Q Consensus 229 gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~----~~-~~a------~~~g~~~~--------~l~ell~~aDvV~ 288 (656)
+++|.|.|. |.||+.+++.|...|++|++.++.. .. +.+ ...+++.+ ++.++++.+|+|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 578999996 9999999999998899999987764 11 111 23455432 2556788899988
Q ss_pred EccCC
Q 006212 289 LHMPL 293 (656)
Q Consensus 289 l~~Pl 293 (656)
.+++.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 87763
No 491
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.87 E-value=0.19 Score=54.92 Aligned_cols=64 Identities=20% Similarity=0.192 Sum_probs=49.2
Q ss_pred cCCCEEEEEecCh----------hHHHHHHHHhcCCCEEEEECCCCChhHHHHcCCeec-CHHHHhccCCEEEEccC
Q 006212 227 LVGKTLAVMGFGK----------VGSEVARRAKGLGMNVIAHDPYAPADKARAVGVELV-SFDQALATADFISLHMP 292 (656)
Q Consensus 227 l~gktvGIIGlG~----------IG~~vA~~lk~~G~~Vi~~d~~~~~~~a~~~g~~~~-~l~ell~~aDvV~l~~P 292 (656)
..|++|+|+|+-- =...++++|++.|.+|.+|||...... -.+..++ ++++.+++||+|++.-.
T Consensus 330 ~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~~--~~~~~~~~~~~~~~~~aD~iv~~~~ 404 (432)
T 3pid_A 330 RKPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGIPVIIYEPVMQEDE--FFNSRVVRDLNAFKQEADVIISNRM 404 (432)
T ss_dssp TCCSSEEEECC-----------CHHHHHHHHHHHTTCCEEEECTTCCSSE--ETTEEECCCHHHHHHHCSEEECSSC
T ss_pred hcCCEEEEEeeEeCCCCcchhcChHHHHHHHHHhcCCEEEEECCCCChhh--cCCceEECCHHHHHhcCCEEEECCC
Confidence 3589999999853 357799999999999999999975321 1344443 89999999999987665
No 492
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=90.81 E-value=0.36 Score=50.62 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=55.5
Q ss_pred CCCEEEEEecChhHHHHHHHHhcCCCE-EEEECCCC-ChhHHHHcCCe---ec-------CHHHHh------ccCCEEEE
Q 006212 228 VGKTLAVMGFGKVGSEVARRAKGLGMN-VIAHDPYA-PADKARAVGVE---LV-------SFDQAL------ATADFISL 289 (656)
Q Consensus 228 ~gktvGIIGlG~IG~~vA~~lk~~G~~-Vi~~d~~~-~~~~a~~~g~~---~~-------~l~ell------~~aDvV~l 289 (656)
.|++|.|+|.|.+|...++.++.+|.+ |++.|... ..+.+++++-. +. ++.+.+ ...|+|+-
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 488999999999999999999999997 89888764 33445544211 10 111111 14677777
Q ss_pred ccCCCccccccccHHHHhcCCCCcEEEEcC
Q 006212 290 HMPLNPTTSKIFNDETFAKMKKGVRIVNVA 319 (656)
Q Consensus 290 ~~Plt~~T~~li~~~~l~~mK~gailINva 319 (656)
++.... .-...+..++++..++.++
T Consensus 259 ~~g~~~-----~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 259 CTGVES-----SIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp CSCCHH-----HHHHHHHHSCTTCEEEECC
T ss_pred CCCChH-----HHHHHHHHhcCCCEEEEEc
Confidence 665211 1133455677777777765
No 493
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=90.68 E-value=0.35 Score=51.97 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=45.2
Q ss_pred ccccccCCCEEEEEecChhHHHHHHHHhcCCCEEEEECCCC--ChhHHHHc-CC---eecC---HHHHhccCCEEEE
Q 006212 222 YVGVSLVGKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYA--PADKARAV-GV---ELVS---FDQALATADFISL 289 (656)
Q Consensus 222 ~~g~~l~gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~--~~~~a~~~-g~---~~~~---l~ell~~aDvV~l 289 (656)
|++.-+.+++|+|+|-|..|+.+++.++.+|++|+++| +. +.....+. .. .+.+ +.++++++|+|+.
T Consensus 17 ~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 17 FQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp ----CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred EeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 34555679999999999999999999999999999998 53 11111110 11 1112 5667888998865
No 494
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=90.67 E-value=0.34 Score=49.36 Aligned_cols=64 Identities=13% Similarity=0.256 Sum_probs=47.0
Q ss_pred CCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCC-h-hH---HHHcCCeec--------CHHHHhccCCEEEEccC
Q 006212 229 GKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAP-A-DK---ARAVGVELV--------SFDQALATADFISLHMP 292 (656)
Q Consensus 229 gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~-~-~~---a~~~g~~~~--------~l~ell~~aDvV~l~~P 292 (656)
.++|.|.| .|.||+.+++.|...|++|.+.++... . .. ....|++.+ ++.++++.+|+|+.+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 36899999 599999999999988999999887653 1 11 123455432 25567888999987776
No 495
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=90.67 E-value=0.16 Score=50.77 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=43.9
Q ss_pred EEEEEec-ChhHHHHHHHHhcC--CCEEEEECCCCCh-hHHHHcCCeec--------CHHHHhccCCEEEEccC
Q 006212 231 TLAVMGF-GKVGSEVARRAKGL--GMNVIAHDPYAPA-DKARAVGVELV--------SFDQALATADFISLHMP 292 (656)
Q Consensus 231 tvGIIGl-G~IG~~vA~~lk~~--G~~Vi~~d~~~~~-~~a~~~g~~~~--------~l~ell~~aDvV~l~~P 292 (656)
+|.|.|. |.||+.+++.|... |++|++.++.... ......++..+ +++++++.+|+|+.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4678886 99999999999987 9999998876522 22223344321 25667889999987665
No 496
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=90.66 E-value=0.23 Score=52.57 Aligned_cols=28 Identities=32% Similarity=0.567 Sum_probs=24.2
Q ss_pred EEEEEecChhHHHHHHHHhcC---CCEEEEE
Q 006212 231 TLAVMGFGKVGSEVARRAKGL---GMNVIAH 258 (656)
Q Consensus 231 tvGIIGlG~IG~~vA~~lk~~---G~~Vi~~ 258 (656)
+|||+|+|+||+.+.+.|... +++|.+.
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~~~evvaI 34 (339)
T 3b1j_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSCCSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCeEEEEE
Confidence 799999999999999998765 4888765
No 497
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.65 E-value=0.39 Score=49.49 Aligned_cols=67 Identities=18% Similarity=0.251 Sum_probs=47.6
Q ss_pred ccCCCEEEEEe-cChhHHHHHHHHhcCCCEEEEECCCCC--hhHHH---H-------cCCeec--------CHHHHhccC
Q 006212 226 SLVGKTLAVMG-FGKVGSEVARRAKGLGMNVIAHDPYAP--ADKAR---A-------VGVELV--------SFDQALATA 284 (656)
Q Consensus 226 ~l~gktvGIIG-lG~IG~~vA~~lk~~G~~Vi~~d~~~~--~~~a~---~-------~g~~~~--------~l~ell~~a 284 (656)
.+.+++|.|.| .|.||+.+++.|...|.+|++.++... ..... . .++.++ +++++++.+
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 35689999999 599999999999999999999987642 11111 1 233221 255677788
Q ss_pred CEEEEccC
Q 006212 285 DFISLHMP 292 (656)
Q Consensus 285 DvV~l~~P 292 (656)
|+|+-+..
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 88876664
No 498
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=90.64 E-value=0.23 Score=54.53 Aligned_cols=61 Identities=13% Similarity=0.241 Sum_probs=47.4
Q ss_pred CCEEEEEecChhHHH-HHHHHhcCCCEEEEECCCCCh--hHHHHcCCeec---CHHHHhccCCEEEEc
Q 006212 229 GKTLAVMGFGKVGSE-VARRAKGLGMNVIAHDPYAPA--DKARAVGVELV---SFDQALATADFISLH 290 (656)
Q Consensus 229 gktvGIIGlG~IG~~-vA~~lk~~G~~Vi~~d~~~~~--~~a~~~g~~~~---~l~ell~~aDvV~l~ 290 (656)
-|+|.|||+|.+|.+ +|+.|+..|++|.++|..... +...+.|+.+. +. +.++.+|+|++.
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE-EHIEGASVVVVS 84 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG-GGGTTCSEEEEC
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCH-HHcCCCCEEEEC
Confidence 478999999999998 999999999999999986533 23455677653 23 345789999885
No 499
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.57 E-value=0.2 Score=52.69 Aligned_cols=45 Identities=20% Similarity=0.345 Sum_probs=36.3
Q ss_pred CCCEEEEEec-ChhHHHHHHHHhcCCCEEEEECCCC-ChhHHHHcCC
Q 006212 228 VGKTLAVMGF-GKVGSEVARRAKGLGMNVIAHDPYA-PADKARAVGV 272 (656)
Q Consensus 228 ~gktvGIIGl-G~IG~~vA~~lk~~G~~Vi~~d~~~-~~~~a~~~g~ 272 (656)
.|+++.|.|. |.||..+++.++..|++|++.++.. ..+.+++.|.
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga 216 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA 216 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC
Confidence 4889999998 9999999999999999999998764 2334444443
No 500
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.56 E-value=0.28 Score=53.96 Aligned_cols=65 Identities=17% Similarity=0.265 Sum_probs=48.8
Q ss_pred CCEEEEEecChhHHHHHHHHhcCCCEEEEECCCCC-hhH-HHHcCCeec-----C---HHHH-hccCCEEEEccCC
Q 006212 229 GKTLAVMGFGKVGSEVARRAKGLGMNVIAHDPYAP-ADK-ARAVGVELV-----S---FDQA-LATADFISLHMPL 293 (656)
Q Consensus 229 gktvGIIGlG~IG~~vA~~lk~~G~~Vi~~d~~~~-~~~-a~~~g~~~~-----~---l~el-l~~aDvV~l~~Pl 293 (656)
.++|-|+|+|.+|+.+|+.|...|.+|.+.|.... .+. ...+++..+ + |+++ +++||+++.+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~ 78 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT 78 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence 45799999999999999999999999999998752 222 234565432 2 4443 7899999887773
Done!