Your job contains 1 sequence.
>006217
MASAAQNQEGVPEILRKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIKTRKT
MQAMELTPDKIGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSF
VFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGV
TELVPEDPSLLQHIKASLLDFSKPFCSEKSSSPPYDEDDDSDPLCAKVSHEILDTVALES
LYSPGEENKFDGEGVYELHGNINEELHLDSADECSKGCEHNHQTEESFMVDGINGAASQV
QSWHFVDDDLSNGIPDSMHSSDHKSESLVNQAEGFPSSKDENMSHIQLKELQEGNHTKLS
LLDLGIVDGAHYRKTLSAIFGSSNRLTENPCFLSVEHKSSFVSWKKGGMVKRHWPGIQQN
LLKKILFSVPLMHGGCTHRSQKEICRKYCPVTMESDNFCEEHISSDKRTENEKFMVLRSM
VPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEMVEQTSDNYDN
KKLDNHKKPWINKRKACDIDETDPELNKFVPKDGLADVKVSIQEMDVLIEMRCPSREYIL
LDIMDAINNLHLDAYSVVSSNLDGVLTLALKSTFRGAAIAPAGIIEQALWKIAGKC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 006217
(656 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 685 3.5e-123 3
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 682 8.2e-123 2
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 583 6.6e-102 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 510 8.9e-76 3
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 603 3.2e-75 2
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 517 2.6e-65 2
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 249 6.4e-26 4
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 238 6.5e-26 3
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 236 2.5e-25 3
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 242 3.3e-25 3
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 236 7.0e-25 4
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 243 5.0e-24 3
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 231 1.0e-23 2
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 223 2.4e-21 2
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 226 5.2e-16 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 177 6.5e-16 3
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 125 1.4e-09 3
UNIPROTKB|Q5N9E6 - symbol:P0505D12.13 "BHLH transcription... 135 2.9e-06 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 138 3.1e-06 1
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 141 3.4e-06 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 116 1.1e-05 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 109 5.1e-05 2
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 114 5.1e-05 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 130 0.00010 2
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 126 0.00012 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 115 0.00021 2
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 121 0.00030 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 119 0.00038 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 101 0.00041 3
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 117 0.00044 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 112 0.00061 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 96 0.00064 2
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 685 (246.2 bits), Expect = 3.5e-123, Sum P(3) = 3.5e-123
Identities = 130/201 (64%), Positives = 164/201 (81%)
Query: 11 VPEILRKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIKTRKTMQAMELTPDK 70
VP+ L+KQLAV+VR+IQWSY IFWS+SA+Q GVLEWGDGYYNGDIKTRKT+QA E+ D+
Sbjct: 9 VPDNLKKQLAVSVRNIQWSYGIFWSVSASQPGVLEWGDGYYNGDIKTRKTIQAAEVKIDQ 68
Query: 71 IGLQRSKQLRELYESL------LKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFSS 124
+GL+RS+QLRELYESL G S++ + +AALSPEDLTD EWYYLVCMSFVF+
Sbjct: 69 LGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFNI 128
Query: 125 GQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVTELV 184
G+G+PG AL+N E IWLCNA+ ADSKVF+RSLLAKSAS+QTV+CFP L GV+E+G TE +
Sbjct: 129 GEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHI 188
Query: 185 PEDPSLLQHIKASLLDFSKPF 205
ED +++Q +K L+ + P+
Sbjct: 189 KEDMNVIQSVKTLFLE-APPY 208
Score = 340 (124.7 bits), Expect = 3.5e-123, Sum P(3) = 3.5e-123
Identities = 83/197 (42%), Positives = 123/197 (62%)
Query: 463 ISSDKRTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSE 520
+S KR E NE+FM LRS++P IS++DK SIL DTI+YL+ L+ RV+ELESC S D+E
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 521 PRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELNKFVPKDGLAD-VK 579
R T M + D+ + + N +KRK D++ + E + GL D ++
Sbjct: 468 TR----ITMMKRKKPDDEEERASANCMN---SKRKGSDVNVGEDEPAD-IGYAGLTDNLR 519
Query: 580 VSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKSTFRGAAI 639
+S +V+IE+RC RE ILL+IMD I++L+LD++SV SS DG+L L + +G I
Sbjct: 520 ISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTVNCKHKGTKI 579
Query: 640 APAGIIEQALWKIAGKC 656
A G+I++AL ++A C
Sbjct: 580 ATTGMIQEALQRVAWIC 596
Score = 221 (82.9 bits), Expect = 3.5e-123, Sum P(3) = 3.5e-123
Identities = 59/161 (36%), Positives = 86/161 (53%)
Query: 275 SKGCEHNHQTEESFMVDGINGAASQVQSWHFVDDDLSNGIPDSMHSSDHKSESLVNQAEG 334
+ G E + +SF+ DG ASQVQSW FV +++SN I S++SSD S++ V
Sbjct: 243 TSGFEQEPEDHDSFINDG---GASQVQSWQFVGEEISNCIHQSLNSSDCVSQTFVGTTGR 299
Query: 335 FPSSKDENMSHIQ-LKELQE-GNHTKLSLLDLGIVDGAHYRKTLSAIFGSSNRLTENPCF 392
D S IQ L ++QE NH + D HY+ +S IF ++++L P F
Sbjct: 300 LAC--DPRKSRIQRLGQIQEQSNHVNMD-------DDVHYQGVISTIFKTTHQLILGPQF 350
Query: 393 LSVEHKSSFVSWKKGGMVKRHWPGIQQNLLKKILFSVPLMH 433
+ + +SSF WK+ VK Q ++KKILF VPLM+
Sbjct: 351 QNFDKRSSFTRWKRSSSVKTLGEK-SQKMIKKILFEVPLMN 390
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 682 (245.1 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 130/212 (61%), Positives = 163/212 (76%)
Query: 3 SAAQNQEGVPEILRKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIKTRKTMQ 62
+ QN+ VPE L+K LAV+VR+IQWSY IFWS+SA+Q GVLEWGDGYYNGDIKTRKT+Q
Sbjct: 2 ATGQNRTTVPENLKKHLAVSVRNIQWSYGIFWSVSASQSGVLEWGDGYYNGDIKTRKTIQ 61
Query: 63 AMELTPDKIGLQRSKQLRELYESLLKGES---------ELAYKRPSAALSPEDLTDAEWY 113
A E+ D++GL+RS+QL ELYESL ES ++ + +AALSPEDL D EWY
Sbjct: 62 ASEIKADQLGLRRSEQLSELYESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWY 121
Query: 114 YLVCMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLD 173
YLVCMSFVF+ G+G+PGR AN E IWLCNA ADSKVFSRSLLAKSA+++TV+CFP L
Sbjct: 122 YLVCMSFVFNIGEGMPGRTFANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLG 181
Query: 174 GVIELGVTELVPEDPSLLQHIKASLLDFSKPF 205
GV+E+G TE + ED +++Q +K S L+ P+
Sbjct: 182 GVVEIGTTEHITEDMNVIQCVKTSFLEAPDPY 213
Score = 546 (197.3 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
Identities = 145/403 (35%), Positives = 218/403 (54%)
Query: 270 SADECSKGCEHNHQT----EESFMVDGINGAASQVQSWHFVDDDLSNGIPDSMHSSDHKS 325
S + G + H+ +SFM + I G ASQVQSW +DD+LSN + S++SSD S
Sbjct: 253 SPSRTTNGFDQEHEQVADDHDSFMTERITGGASQVQSWQLMDDELSNCVHQSLNSSDCVS 312
Query: 326 ESLVNQAEGFPSSKDENMSHIQ-LKELQEGNHTKLSLLDLGIVDGAHYRKTLSAIFGSSN 384
++ V A G + S +Q L ++QE +L D HY+ +S IF +++
Sbjct: 313 QTFVEGAAG-RVAYGARKSRVQRLGQIQEQQRNVKTLSFDPRNDDVHYQSVISTIFKTNH 371
Query: 385 RLTENPCFLSVEHKSSFVSWKKGGMVKRHWPGI---QQNLLKKILFSVPLMHGGCTHRSQ 441
+L P F + + +SSF WKK + Q +LKKI+F VP +H Q
Sbjct: 372 QLILGPQFRNCDKQSSFTRWKKSSSSSSGTATVTAPSQGMLKKIIFDVPRVH-------Q 424
Query: 442 KEICRKYCPVTMESDNFCEEHISSDKRTE--NEKFMVLRSMVPYISEVDKASILSDTIKY 499
KE P + + KR E NE+FM LR ++P I+++DK SIL DTI+Y
Sbjct: 425 KEKLMLDSPEARDETG--NHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEY 482
Query: 500 LKKLEARVEELESCMYSVDSEPR-----PKRNYTEMVEQTSDNYDNKKLDNHKKPWINKR 554
L++LE RV+ELESC S D+E R ++ + E+TS N N + N KK +N
Sbjct: 483 LQELERRVQELESCRESTDTETRGTMTMKRKKPCDAGERTSANCANNETGNGKKVSVN-- 540
Query: 555 KACDIDETDPELNKFVPKDGLAD-VKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLD 613
++ E +P F GL D +++ +V+IE+RC RE +LL+IMD I++LHLD
Sbjct: 541 ---NVGEAEPADTGFT---GLTDNLRIGSFGNEVVIELRCAWREGVLLEIMDVISDLHLD 594
Query: 614 AYSVVSSNLDGVLTLALKSTFRGAAIAPAGIIEQALWKIAGKC 656
++SV SS DG+L L + +G+ IA G+I++AL ++A C
Sbjct: 595 SHSVQSSTGDGLLCLTVNCKHKGSKIATPGMIKEALQRVAWIC 637
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 583 (210.3 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 124/214 (57%), Positives = 156/214 (72%)
Query: 3 SAAQNQEGVPEILRKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIKTRKTMQ 62
+AA + +LRKQLA+AVRS+QWSYAIFWS S Q GVLEWG+G YNGD+K RK +
Sbjct: 11 AAAGRSKRQNSLLRKQLALAVRSVQWSYAIFWSSSLTQPGVLEWGEGCYNGDMKKRK--K 68
Query: 63 AMELTPDKIGLQRSKQLRELYESLLKGESELAYKRP--------------SAALSPEDLT 108
+ E + K GLQ+SK+LR+LY S+L+G+S S LSP+DL+
Sbjct: 69 SYE-SHYKYGLQKSKELRKLYLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLS 127
Query: 109 DAEWYYLVCMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVIC 168
D EWYYLV MS+VFS Q LPGRA A ETIWLCNAQ A++K+FSRSLLA+SASIQTV+C
Sbjct: 128 DEEWYYLVSMSYVFSPSQCLPGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVC 187
Query: 169 FPHLDGVIELGVTELVPEDPSLLQHIKASLLDFS 202
FP+L GVIELGVTEL+ ED +LL++IK+ L++ S
Sbjct: 188 FPYLGGVIELGVTELISEDHNLLRNIKSCLMEIS 221
Score = 447 (162.4 bits), Expect = 6.6e-102, Sum P(2) = 6.6e-102
Identities = 135/358 (37%), Positives = 203/358 (56%)
Query: 320 SSDHKS----ESLVNQAEGFPSSKDENMSHIQLKELQEGNHTKLSLLDLGIVD-GAHYRK 374
S DH +S + + + DE I++ E + H L LGI D HY++
Sbjct: 204 SEDHNLLRNIKSCLMEISAHQDNDDEKKMEIKISEEK---HQ----LPLGISDEDLHYKR 256
Query: 375 TLSAIFG-SSNRLTEN--------PCFLSVEHKSSFVSWKKGGMVKRHWPG-IQ----QN 420
T+S + S++R +N P ++ E SSF+ WK+ ++ G +Q QN
Sbjct: 257 TISTVLNYSADRSGKNDKNIRHRQPNIVTSEPGSSFLRWKQ---CEQQVSGFVQKKKSQN 313
Query: 421 LLKKILFSVPLMHGGCTHRSQKEICRKYCPVTMESDNFCEEHISSDKRTENEKFMVLRSM 480
+L+KIL VPLMH SQ + D+ SD+R ENEKF VLR+M
Sbjct: 314 VLRKILHDVPLMHTKRMFPSQNS--------GLNQDD------PSDRRKENEKFSVLRTM 359
Query: 481 VPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKR-----NYTEMVEQTS 535
VP ++EVDK SIL++TIKYL++LEARVEELESCM SV+ R ++ N + ++E+TS
Sbjct: 360 VPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKTTENLNDSVLIEETS 419
Query: 536 DNYDNK-KLDNHKKPWINKRKACDIDETDPELNKFVPKDGLADVKVSIQEMDVLIEMRCP 594
NYD+ K+D++ ET+ ++ F K L +V ++E +V+IE+RC
Sbjct: 420 GNYDDSTKIDDNS------------GETE-QVTVFRDKTHL---RVKLKETEVVIEVRCS 463
Query: 595 SREYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKSTFRGAAIAPAGIIEQALWKI 652
R+YI+ DIM+ ++NLH+DA+SV S L+ LTL LK+ FRGAA+A G+I++ L ++
Sbjct: 464 YRDYIVADIMETLSNLHMDAFSVRSHTLNKFLTLNLKAKFRGAAVASVGMIKRELRRV 521
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 510 (184.6 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 100/189 (52%), Positives = 130/189 (68%)
Query: 15 LRKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIKTRKTMQAMELTPDKIGLQ 74
L+ L AV+S+ W+Y++FW QQ VL WG+GYYNG IKTRKT Q E+T ++ L+
Sbjct: 20 LQGLLKTAVQSVDWTYSVFWQF-CPQQRVLVWGNGYYNGAIKTRKTTQPAEVTAEEAALE 78
Query: 75 RSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFSSGQGLPGRALA 134
RS+QLRELYE+LL GES + R ALSPEDLT+ EW+YL+C+SF F G+PG+A A
Sbjct: 79 RSQQLRELYETLLAGEST-SEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYA 137
Query: 135 NSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVTELVPEDPSLLQHI 194
+ +WL A DSK FSR++LAKSA IQTV+C P LDGV+ELG T+ V ED ++
Sbjct: 138 RRKHVWLSGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELT 197
Query: 195 KASLLDFSK 203
K+ D K
Sbjct: 198 KSFFYDHCK 206
Score = 181 (68.8 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 68/233 (29%), Positives = 117/233 (50%)
Query: 324 KSESLVNQAEGFPSSKDENMSHIQL-KELQ-EGNHTKLSLLDLG--IVDGAHYRKTLSAI 379
+ E +++ S DE++S+ L +L E HT + +D+ + +G +Y +T++ +
Sbjct: 232 EEEMTMSEEMRLGSPDDEDVSNQNLHSDLHIESTHTLDTHMDMMNLMEEGGNYSQTVTTL 291
Query: 380 FGSS-NRLTENPCFLSVEHKSSFVSWK-KGGMVKRHW-----PGIQQNLLKKILFSVPLM 432
S L + S +SSF +W+ + G K H P Q +LK+++F VP +
Sbjct: 292 LMSHPTSLLSDSVSTSSYIQSSFATWRVENG--KEHQQVKTAPSSQW-VLKQMIFRVPFL 348
Query: 433 HGGCTHRSQKEICRKYCPVTMESDNFCEEHISSDKRTENEKFMVLRSMVPYISEVDKASI 492
H + K + R+ + + E +K NEKF+ LRSMVP+++++DK SI
Sbjct: 349 HD---NTKDKRLPRE------DLSHVVAERRRREKL--NEKFITLRSMVPFVTKMDKVSI 397
Query: 493 LSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKLDN 545
L DTI Y+ L RV ELE+ + E + KR T +TS+ + ++N
Sbjct: 398 LGDTIAYVNHLRKRVHELENTHH----EQQHKRTRT-CKRKTSEEVEVSIIEN 445
Score = 104 (41.7 bits), Expect = 8.9e-76, Sum P(3) = 8.9e-76
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 577 DVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKSTFRG 636
+V+VSI E DVL+EMRC R+ +LLDI+ ++ L ++ +V +S D +++ RG
Sbjct: 437 EVEVSIIENDVLLEMRCEYRDGLLLDILQVLHELGIETTAVHTSVNDHDFEAEIRAKVRG 496
Query: 637 --AAIA 640
A+IA
Sbjct: 497 KKASIA 502
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 603 (217.3 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 117/210 (55%), Positives = 148/210 (70%)
Query: 1 MASAAQNQEGV--PEI--LRKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIK 56
MASA QE P R +LA AVRSI WSY IFWS S + GVL W DG+YNG++K
Sbjct: 1 MASAPPVQEEALQPGTNHFRSRLAAAVRSISWSYTIFWSTSTSLPGVLTWNDGFYNGEVK 60
Query: 57 TRKTMQAMELTPDKIGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLV 116
TRK +LT D++ L+RS+QL ELY SLL GE + ++P AALSPED+ D EWYY+V
Sbjct: 61 TRKISNLEDLTADQLVLRRSEQLSELYYSLLSGECDHRARKPVAALSPEDIADTEWYYVV 120
Query: 117 CMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVI 176
CM++ F GQGLPGR+ A++ ++WLCNAQ ADSK F R+LLAKSASIQT++C P + GV+
Sbjct: 121 CMTYAFRPGQGLPGRSYASNRSVWLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVL 180
Query: 177 ELGVTELVPEDPSLLQHIKASLLDFSKPFC 206
ELG T+ V EDP+L+ I A L + P C
Sbjct: 181 ELGTTDPVSEDPNLVNRIVAYLKELQFPIC 210
Score = 174 (66.3 bits), Expect = 3.2e-75, Sum P(2) = 3.2e-75
Identities = 56/162 (34%), Positives = 84/162 (51%)
Query: 362 LDLGIVD--GAHYRKTLSAIFGSSNRLTENPCFLSVEHKSSFVSWKKGGMVKR-----HW 414
LDLG R+T++A ++N + ++ H S FVSWK+ ++
Sbjct: 282 LDLGSYQLVPTSARETVAAAAAAANDVDG----VAYSHASCFVSWKRANPAEKVVAVPMT 337
Query: 415 PGIQ-QNLLKKILFSVPLMHGGCTHRSQKEICRKYCPVTMESDNFCEEHISSDKRTE--- 470
GI+ Q LLKK + GG S + T N + H+ S++R
Sbjct: 338 AGIESQKLLKKAV------GGGTAWMSNIDDRGSVAITTTPGSNI-KSHVMSERRRREKL 390
Query: 471 NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELES 512
NE F++L+S++P + +VDKASIL++TI YLK LE RV+ELES
Sbjct: 391 NEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELES 432
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 517 (187.1 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 108/204 (52%), Positives = 133/204 (65%)
Query: 16 RKQLAVAVRSIQWSYAIFWSLSAAQQGVLEWGDGYYNGDIKTRKTMQAMELTPDKIGLQR 75
R LA AVRSI WSYAIFWS+S + GVL W DG+YNG +KTRK + +LT ++ +QR
Sbjct: 20 RSLLAAAVRSISWSYAIFWSISTSCPGVLTWNDGFYNGVVKTRKISNSADLTAGQLVVQR 79
Query: 76 SKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFSSGQGLPGRALAN 135
S+QLRELY SLL GE + +RP AALSPEDL D EWYY+VCM++ F GQGLPG++ A+
Sbjct: 80 SEQLRELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQGLPGKSYAS 139
Query: 136 SETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVT-------------E 182
+ ++WL NAQ ADSK F RSLLAK T+IC P GV+ELG T E
Sbjct: 140 NASVWLRNAQSADSKTFLRSLLAK-----TIICIPFTSGVLELGTTDPTFIIAYACHNME 194
Query: 183 LVPEDPSLLQHIKASLLDFSKPFC 206
V EDP L+ I A + P C
Sbjct: 195 QVLEDPKLVNRIVAYFQELQFPIC 218
Score = 166 (63.5 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 58/152 (38%), Positives = 80/152 (52%)
Query: 399 SSFVSWKKGGMVKRHWP---GIQ-QNLLKKILFSVPLMHGGCTHRSQKEICRKYCPVTME 454
S F++WK + P GI+ Q LLKK++ M G R+ +T E
Sbjct: 337 SCFMAWKSAKSNEMAVPVVTGIESQKLLKKVVDCGARMSTGRGSRAA---------LTQE 387
Query: 455 SDNFCEEHISSDKRTE---NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELE 511
S + H+ S++R NE F++L+S+VP I +VDKASIL +TI YLK LE RV+ELE
Sbjct: 388 SG--IKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELE 445
Query: 512 SCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKL 543
S SEP +R TE +Q K+L
Sbjct: 446 S-----SSEPSHQRA-TETGQQRRCEITGKEL 471
Score = 132 (51.5 bits), Expect = 9.9e-62, Sum P(2) = 9.9e-62
Identities = 47/180 (26%), Positives = 90/180 (50%)
Query: 484 ISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKL 543
ISE + L++ LK + + +++ S+ E Y +++E+ ++
Sbjct: 395 ISERRRREKLNEMFLILKSIVPSIHKVDKA--SILEETIA---YLKVLEKRVKELESSSE 449
Query: 544 DNHKKPW-INKRKACDIDETDPELNKFVPKDGLAD-------VKVSIQEMDVLIEMRCPS 595
+H++ +++ C+I T EL + G D V V++ + VL+E++C
Sbjct: 450 PSHQRATETGQQRRCEI--TGKELVSEIGVSGGGDAGREHHHVNVTVTDKVVLLEVQCRW 507
Query: 596 REYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKSTFR-GAAIAPAGIIEQALWKIAG 654
+E ++ + DAI +L LD SV +S DG+L L +++ F ++AP G+I +AL K G
Sbjct: 508 KELVMTRVFDAIKSLCLDVLSVQASAPDGLLGLKIQAKFACSGSVAP-GMISEALQKAIG 566
Score = 41 (19.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 422 LKKILFSVPLMHGGCTHRSQKEI 444
L+++ +S L+ G C HR+++ I
Sbjct: 83 LRELYYS--LLSGECDHRARRPI 103
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 249 (92.7 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 70/201 (34%), Positives = 105/201 (52%)
Query: 2 ASAAQNQEGVPEILRKQLAVAVRSIQWSYAIFWSLS---AAQQGVLEWGDGYYNG-DIKT 57
A+AA NQ+ + + R Q + W+YAIFW S + +L WGDGYY G D
Sbjct: 59 AAAAFNQDTLQQ--RLQSIIEGSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDK 116
Query: 58 RKTMQAMELTPDKIGLQ--RSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYL 115
RK + TP Q R + LREL SL+ G A P A+ E++TD EW++L
Sbjct: 117 RKQRSS---TPAAAAEQEHRKRVLREL-NSLIAG----AGAAPDEAVE-EEVTDTEWFFL 167
Query: 116 VCMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGV 175
V M+ F +G GLPG+AL ++ W+ S R+ A + ++T++C P GV
Sbjct: 168 VSMTQSFPNGLGLPGQALFAAQPTWIATG--LSSAPCDRARQAYTFGLRTMVCLPLATGV 225
Query: 176 IELGVTELVPEDPSLLQHIKA 196
+ELG T+++ + + I+A
Sbjct: 226 LELGSTDVIFQTGDSIPRIRA 246
Score = 111 (44.1 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVD 518
H+ +++ R E N++F LR++VP +S++DKAS+L D I Y+ +L ++ LE+ ++
Sbjct: 525 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKETLQ 584
Query: 519 SE 520
S+
Sbjct: 585 SQ 586
Score = 57 (25.1 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 577 DVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAY 615
+++ I ++ +I ++C R + +M A+ L LD Y
Sbjct: 616 EIEAKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVY 654
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 20/66 (30%), Positives = 28/66 (42%)
Query: 129 PGRALANSETIWLCNAQCADSKVFSRSLLAKSASI-QTVICFPHLDGVIELGVTELVPED 187
P A A+ +WL +A D K S+ A S+ + PH E G T + E+
Sbjct: 262 PDAASADPSVLWLADAPPMDMK---DSISAADISVSKPPPPPPHQIQHFENGSTSTLTEN 318
Query: 188 PSLLQH 193
PS H
Sbjct: 319 PSPSVH 324
Score = 38 (18.4 bits), Expect = 6.4e-26, Sum P(4) = 6.4e-26
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 381 GSSNRLTENP 390
GS++ LTENP
Sbjct: 310 GSTSTLTENP 319
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 238 (88.8 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 66/186 (35%), Positives = 105/186 (56%)
Query: 451 VTMESDNFCEEHISSDKRTEN---EKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARV 507
+T + + + H+ S++R E F++L+S+VP I +VDKASIL++TI YLK+LE RV
Sbjct: 234 MTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRV 293
Query: 508 EELESCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELN 567
EELES S PRP E + KK+ + KRKA ++TD E
Sbjct: 294 EELES---SSQPSPRPM----ETTRRRCCKSTGKKVSAGARA---KRKAPAPEDTDGERR 343
Query: 568 KFVPKDGLADVKVSIQE-MDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVL 626
V ++V V+I + ++L+E++C +E ++ + DAI + LD SV +S DG+L
Sbjct: 344 HCV-----SNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLL 398
Query: 627 TLALKS 632
L +++
Sbjct: 399 GLKIQA 404
Score = 113 (44.8 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 158 AKSASIQTVICFPHL-DGVIELGVTELVPEDPSLLQHIKASLLD 200
++SASI+T++C P + GV+ELG T+ V EDP+L+ I ASL D
Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLWD 56
Score = 54 (24.1 bits), Expect = 6.5e-26, Sum P(3) = 6.5e-26
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 265 ELHLDSADECSKGCEHN-HQTEESFMVDGINGAASQVQSWHFVDDDLSNGIPDSMHS 320
E H + E ++ CE N H E +D I S + +DDD S+ + D S
Sbjct: 97 EPHAVAGGEVAE-CESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSWVADPWSS 152
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 236 (88.1 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 59/199 (29%), Positives = 100/199 (50%)
Query: 13 EILRKQLAVAVRSI--QWSYAIFWSLSA---AQQG----VLEWGDGYYNGDIKTRKTMQA 63
+ L+++L + S W+YAIFW +S + G +L WGDGYY G+ K
Sbjct: 50 DTLQQRLQALIESAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEKKKNN 109
Query: 64 MELTPDKIGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFS 123
+ R + +REL SL+ G + S + E++TD EW++LV M+ F
Sbjct: 110 TNTAEQE---HRKRVIREL-NSLISGGIGV-----SDESNDEEVTDTEWFFLVSMTQSFV 160
Query: 124 SGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVTEL 183
+G GLPG + NS IWL + R+ + ++T++C +GV+ELG +E+
Sbjct: 161 NGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVELGSSEV 220
Query: 184 VPEDPSLLQHIKASLLDFS 202
+ + L+ + +L +F+
Sbjct: 221 ISQSSDLMHKVN-NLFNFN 238
Score = 113 (44.8 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 21/54 (38%), Positives = 41/54 (75%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELES 512
H+ +++ R E N++F LR++VP +S++DKAS+L D I Y+ +L++++++ ES
Sbjct: 416 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAES 469
Score = 59 (25.8 bits), Expect = 2.5e-25, Sum P(3) = 2.5e-25
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 528 TEMVEQTSDNYD-NKKLDNHKKPWINKRKACDIDETDPEL-NKFVPKDGLA-DVKVSIQE 584
+++ + SD + KKLD K N K C + + N+ + ++ V I
Sbjct: 462 SKLQQAESDKEEIQKKLDGMSKEG-NNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIG 520
Query: 585 MDVLIEMRCPSREYILLDIMDAINNLHLD----AYSVVSSNLDGVLTLALKSTF 634
DV+I ++C +++ M+A+ L L+ + SVV+ + T+ + S F
Sbjct: 521 WDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQATVKMGSQF 574
Score = 40 (19.1 bits), Expect = 7.4e-16, Sum P(2) = 7.4e-16
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 531 VEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELNKFVPKD 573
V +++ N K D+H+ + K ++ + + + V KD
Sbjct: 282 VNNGNNSNSNSKSDSHQISKLEKNDISSVENQNRQSSCLVEKD 324
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 242 (90.2 bits), Expect = 3.3e-25, Sum P(3) = 3.3e-25
Identities = 66/186 (35%), Positives = 98/186 (52%)
Query: 25 SIQWSYAIFWSLSAAQQG--VLEWGDGYYNGDIKTRKT----MQAMELTPDKIGLQRSKQ 78
+ W+YAIFW +S ++ G VL WGDGY + K+ + +M + R +
Sbjct: 63 NFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKRV 122
Query: 79 LRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFSSGQGLPGRALANSET 138
L++L++ L G SE + AL + +TD E + L M F F G+G PG+ A+++
Sbjct: 123 LQKLHD--LFGGSE----EENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKP 176
Query: 139 IWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVTELVPEDPSLLQHIKASL 198
+WL + + S RS LAKSA IQTV+ P GV+ELG T +PE + I+ SL
Sbjct: 177 VWLSDVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIR-SL 235
Query: 199 LDFSKP 204
S P
Sbjct: 236 FTSSLP 241
Score = 115 (45.5 bits), Expect = 3.3e-25, Sum P(3) = 3.3e-25
Identities = 22/54 (40%), Positives = 40/54 (74%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELES 512
H+ +++ R E N++F LRS+VP IS++DKAS+L D + Y+ +L A+++ +E+
Sbjct: 434 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEA 487
Score = 49 (22.3 bits), Expect = 3.3e-25, Sum P(3) = 3.3e-25
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 576 ADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNL----DGVL-TLAL 630
+D+ V DV + + CP + I A ++ V++SNL D VL T +
Sbjct: 504 SDINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVE---VINSNLEVSQDTVLHTFVV 560
Query: 631 KS 632
KS
Sbjct: 561 KS 562
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 236 (88.1 bits), Expect = 7.0e-25, Sum P(4) = 7.0e-25
Identities = 61/198 (30%), Positives = 99/198 (50%)
Query: 7 NQEGVPEILRKQLAVAVRSIQWSYAIFWSLSAAQQG---------VLEWGDGYYNGDI-K 56
N++ + + R Q + + W+YA+FW S G +L WGDGYY G+ K
Sbjct: 59 NEDNLQQ--RLQALIEGANENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYKGEEEK 116
Query: 57 TRKTMQAMELTPDKIGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLV 116
+RK ++ R + +REL SL+ G A E++TD EW++LV
Sbjct: 117 SRKKKSNPASAAEQE--HRKRVIREL-NSLISG----GVGGGDEA-GDEEVTDTEWFFLV 168
Query: 117 CMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVI 176
M+ F G GLPG+A +NS+TIWL + R+ + +QT++C +GV+
Sbjct: 169 SMTQSFVKGTGLPGQAFSNSDTIWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVV 228
Query: 177 ELGVTELVPEDPSLLQHI 194
ELG +E++ + L+ +
Sbjct: 229 ELGSSEIIHQSSDLVDKV 246
Score = 112 (44.5 bits), Expect = 7.0e-25, Sum P(4) = 7.0e-25
Identities = 21/54 (38%), Positives = 41/54 (75%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELES 512
H+ +++ R E N++F LR++VP +S++DKAS+L D I Y+ +L++++++ ES
Sbjct: 417 HVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAES 470
Score = 50 (22.7 bits), Expect = 7.0e-25, Sum P(4) = 7.0e-25
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 577 DVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKSTFRG 636
+V V I D +I ++C R + M+A+ L L+ + S ++ L + + G
Sbjct: 510 EVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEV-NHASLSVVNDLMIQQATVKMG 568
Query: 637 AAIAPAGIIEQALWKIAGKC 656
++ AL + G+C
Sbjct: 569 NQFFTQDQLKVALTEKVGEC 588
Score = 48 (22.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 21/106 (19%), Positives = 47/106 (44%)
Query: 503 LEARV-EELESCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACDIDE 561
LEA V +E ES V+ E +P++ + + ++ + + ++ +N+R +
Sbjct: 379 LEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQR-FYSLRA 437
Query: 562 TDPELNKFVPKDGLADVKVSIQEMDVLIEMRCPSREYIL--LDIMD 605
P ++K L D I E+ ++ +E + +D+M+
Sbjct: 438 VVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMN 483
Score = 43 (20.2 bits), Expect = 7.0e-25, Sum P(4) = 7.0e-25
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 324 KSESLVNQAEGFPSSKDENMSHIQLKELQEGNHTKLSLLDLGIVDGAHYRKTLS-AIFGS 382
KS +VN G + ++E+ S+ + + LS + D H S A
Sbjct: 329 KSCEMVNFKNGIENGQEEDSSNKKRSPVSNNEEGMLSFTSVLPCDSNHSDLEASVAKEAE 388
Query: 383 SNRLTENP 390
SNR+ P
Sbjct: 389 SNRVVVEP 396
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 243 (90.6 bits), Expect = 5.0e-24, Sum P(3) = 5.0e-24
Identities = 66/205 (32%), Positives = 98/205 (47%)
Query: 2 ASAAQNQEGVPEILRKQLAVAVRSIQWSYAIFWSLSAAQQG--VLEWGDGYYNGD---IK 56
A A NQE + + R Q + W+YAIFW S G VL WGDGYY G+
Sbjct: 59 AQAGFNQETLQQ--RLQALIEGTHEGWTYAIFWQPSYDFSGASVLGWGDGYYKGEEDKAN 116
Query: 57 TRKTMQAMELTPDKIGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLV 116
R+ + + R K LREL SL+ G +A PS E++TD EW++LV
Sbjct: 117 PRRRSSSPPFSTPADQEYRKKVLREL-NSLISGG--VA---PSDDAVDEEVTDTEWFFLV 170
Query: 117 CMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVI 176
M+ F+ G GL G+A A +W+ + R+ + T+ C P +GV+
Sbjct: 171 SMTQSFACGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVV 230
Query: 177 ELGVTELVPEDPSLLQHIKASLLDF 201
E+G TE + + L+ ++ L +F
Sbjct: 231 EVGSTEPIRQSSDLINKVRI-LFNF 254
Score = 112 (44.5 bits), Expect = 5.0e-24, Sum P(3) = 5.0e-24
Identities = 22/54 (40%), Positives = 40/54 (74%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELES 512
H+ +++ R E N++F LR++VP +S++DKAS+L D I Y+ +L+++V + ES
Sbjct: 453 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTES 506
Score = 41 (19.5 bits), Expect = 5.0e-24, Sum P(3) = 5.0e-24
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 372 YRKTLSAIFGSSNRLTENP 390
+ K++ GSS+ +TENP
Sbjct: 305 FSKSIQFENGSSSTITENP 323
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 231 (86.4 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 64/201 (31%), Positives = 105/201 (52%)
Query: 10 GVPEILRKQLAVAV-----RSIQWSYAIFW--SLSAAQQGVLEWGDGYYNGDIKTRKTMQ 62
G + L K+L+ V + W+YAIFW ++S + Q VL WGDG + ++
Sbjct: 43 GTDDTLNKKLSSLVDWPNSENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKV 102
Query: 63 AMELTPDKIGLQ-------RSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYL 115
+ +G + R + L++L+ L G E Y ALS E +T E ++L
Sbjct: 103 VRSYNFNNMGAEEETWQDMRKRVLQKLHR-LFGGSDEDNY-----ALSLEKVTATEIFFL 156
Query: 116 VCMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGV 175
M F F+ G+G PGR ++ + +WL +A ++S RS +AKSA I+T++ P GV
Sbjct: 157 ASMYFFFNHGEGGPGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGV 216
Query: 176 IELGVTELVPEDPSLLQHIKA 196
+ELG +PE+ L++ ++A
Sbjct: 217 LELGSVWSLPENIGLVKSVQA 237
Score = 120 (47.3 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVD 518
H+ +++ R E N++F LRS+VP IS++DKAS+L D I Y+K+L+ +V+ +E D
Sbjct: 396 HVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERVGTD 455
Query: 519 SEPRPKRNYTEMVEQTSD 536
T VE++ +
Sbjct: 456 KSLSESNTIT--VEESPE 471
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 223 (83.6 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 58/185 (31%), Positives = 95/185 (51%)
Query: 28 WSYAIFWSLSA---AQQGVLEWGDGYYNG--DIKTRKTMQAME--LTPDKIGLQRSKQLR 80
WSYAIFW S + + VL+WGDG Y G + KTR ++ + L+ + +RS +R
Sbjct: 49 WSYAIFWKPSYDDFSGEAVLKWGDGVYTGGNEEKTRGRLRRKKTILSSPEEKERRSNVIR 108
Query: 81 ELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFSSGQGLPGRALANSETIW 140
EL ++ GE+ + + ++TD EW++LV M++ F +G GL G+A A+ +
Sbjct: 109 EL-NLMISGEAFPVVEDDVSDDDDVEVTDMEWFFLVSMTWSFGNGSGLAGKAFASYNPVL 167
Query: 141 LCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVTELVPEDPSLLQHIKASLLD 200
+ + R+ +QT++C P +GV+EL TE + + L I+ L
Sbjct: 168 VTGSDLIYGSGCDRAKQGGDVGLQTILCIPSHNGVLELASTEEIRPNSDLFNRIRF-LFG 226
Query: 201 FSKPF 205
SK F
Sbjct: 227 GSKYF 231
Score = 104 (41.7 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 19/60 (31%), Positives = 41/60 (68%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVD 518
H+ +++ R E N +F LR++VP +S++DK S+L D + Y+ +L+++ E +E ++++
Sbjct: 344 HVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEKHAIE 403
Score = 41 (19.5 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 10/59 (16%), Positives = 25/59 (42%)
Query: 461 EHISSDKRTENEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDS 519
E++ +K +F L+ + + + + + K+E ++ E + M V+S
Sbjct: 393 ENVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVES 451
Score = 38 (18.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 19/83 (22%), Positives = 37/83 (44%)
Query: 410 VKRHWPGIQQNLLKKILFSVPLMHGGCTHRSQKEICRKYCPVTMESDNFCEEHISSDKRT 469
+++H IQ N LK+I + C + + K MESD+ + S ++
Sbjct: 397 LEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDD-AMVRVES-RKD 454
Query: 470 ENEKFMVLRSMVPYISEVDKASI 492
+ ++ +++ EV+ ASI
Sbjct: 455 HHPGARLMNALMDLELEVNHASI 477
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 226 (84.6 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 108/387 (27%), Positives = 174/387 (44%)
Query: 281 NHQTEESFMVDGINGAASQVQSWHFVDDDLSNGIPDSMHSSDHKSESLVNQA---EGFPS 337
N +EE +V+ I A ++Q D+ +S+G P S S K N + F +
Sbjct: 16 NKVSEEPNVVNRITTAFWELQLPACSDEPISSGTPSSPSSPPTKETGDANTVVIDDLFLA 75
Query: 338 SKDENM--SHIQLKELQEGNHT--KLSLLDLGIVDGAHYRKTLSAIFGSSNRLTENPCFL 393
D + Q +E Q G+ + + + I D Y + SS+ E
Sbjct: 76 HSDAILPAGGDQKEEHQLGDDLGQQQAATAMEIDDDVIYSLIRNWDNDSSSSWIELLDHA 135
Query: 394 SVEHKSSFVSWKKGGMVKRHWPGIQ--QNLLKKILFSVPLMHGGCTHRSQKEICRKYCPV 451
V S FV WK+ + K G + Q LLKK++ G +R+ C +
Sbjct: 136 IVSPASCFVPWKRTELDKEAVAGGEAAQRLLKKVVGG----GGAWMNRAAGS-----CSI 186
Query: 452 TMESDNFCEEHISSDKRTE---NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVE 508
+ H+ S++R NE F++L+S+VP I +VDKASILS+TI YLK+LE RV+
Sbjct: 187 --------KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQ 238
Query: 509 ELESCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELNK 568
ELES V S P ++ +E + W+ + E+ +
Sbjct: 239 ELESGK-KV-SRPAKRKPCSETIIGGGGGGGGAGAVKEHHHWV-------LSESQ----E 285
Query: 569 FVPKDGLADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVLTL 628
P D V + + ++ +E++C +E ++ + DAI +L LD SV +S DG+L L
Sbjct: 286 GTPSDVRVIV---MDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLLGL 342
Query: 629 ALKSTFRG-AAIAPAGIIEQALWKIAG 654
+++ + AA+ PA I E +AG
Sbjct: 343 KIRAKYASSAAVVPAMISETLRTAVAG 369
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 177 (67.4 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 52/188 (27%), Positives = 92/188 (48%)
Query: 15 LRKQLAVAVRSIQWSYAIFW---SLSAAQQGVLEWGDGYYNGDIKTRKTMQAMELTP-DK 70
L++ L V W YA+FW +++++ VL WGDG+ + +K + + D+
Sbjct: 50 LQQGLRHVVEGSDWDYALFWLASNVNSSDGCVLIWGDGH----CRVKKGASGEDYSQQDE 105
Query: 71 IGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVF--SSGQGL 128
I + + LR+L+ S + + + + A LTD + +YL + F F + +
Sbjct: 106 I---KRRVLRKLHLSFVGSDEDHRLVKSGA------LTDLDMFYLASLYFSFRCDTNKYG 156
Query: 129 PGRALANSETIWLCNAQCADSKVFSRSLLAKSASIQTVICFPHLDGVIELGVTELVPEDP 188
P + + +W + S RS LA+SA QTV+ P GV+ELG +PED
Sbjct: 157 PAGTYVSGKPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDK 216
Query: 189 SLLQHIKA 196
S+++ +K+
Sbjct: 217 SVIEMVKS 224
Score = 103 (41.3 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 20/54 (37%), Positives = 38/54 (70%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELES 512
H+ +++ R E N++F LR++VP IS++DKAS+L+D I Y+ ++ ++ E+
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYET 374
Score = 54 (24.1 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 471 NEKFMVLRSMVPYISEVDKASILSDTIKYLK----------------K 502
N++F LR++VP IS++DKAS+L+D I Y+ K
Sbjct: 333 NQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMK 380
Score = 37 (18.1 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 293 INGAASQVQSWHF---VDDDLSNGIPDSMHSSDHKSESLVNQAEGFPSSKDENM 343
+ GA + S +F +DD G S+ S + ++ NQ G+ KDE +
Sbjct: 247 LGGAKPRSMSINFSPKTEDD--TGF--SLESYEVQAIGGSNQVYGYEQGKDETL 296
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 125 (49.1 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 37/142 (26%), Positives = 77/142 (54%)
Query: 462 HISSDK-RTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVD 518
H+ ++K R E N +F LR++VP +S +DKAS+LSD + Y++ L++++++LE+ + +
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKKM- 308
Query: 519 SEPRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELN-KFVPKDGLAD 577
K T+ ++ +S N ++ +N++ + +D E+ K V ++ +
Sbjct: 309 -----KMTETDKLDNSSSNTSPSSVEYQ----VNQKPSKSNRGSDLEVQVKIVGEEAIIR 359
Query: 578 VKV-SIQE-----MDVLIEMRC 593
V+ ++ M L+EM C
Sbjct: 360 VQTENVNHPTSALMSALMEMDC 381
Score = 72 (30.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 23/91 (25%), Positives = 44/91 (48%)
Query: 109 DAEWYYLVCMSFVFSSGQGLPGRALANSETIWLCNAQCADSKVFSRSLLAKSAS---IQT 165
D E +Y SF + + P + +++ +WL D FS AK A + T
Sbjct: 104 DLELFYAA--SF-YGEDRS-PRKEVSDESLVWLTGP---DELRFSNYERAKEAGFHGVHT 156
Query: 166 VICFPHLDGVIELGVTELVPEDPSLLQHIKA 196
++ P +G+IELG +E + ++ + + +K+
Sbjct: 157 LVSIPINNGIIELGSSESIIQNRNFINRVKS 187
Score = 61 (26.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 14 ILRKQLAVAVRSI--QWSYAIFWSL---SAAQQGVLEWGDGYYNGD 54
+L+++L V + +W+Y IFW + + L W DG++ G+
Sbjct: 34 VLQQKLRFVVETSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGN 79
>UNIPROTKB|Q5N9E6 [details] [associations]
symbol:P0505D12.13 "BHLH transcription factor-like protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 InterPro:IPR025610 Pfam:PF14215 EMBL:AP008207
EMBL:AP003270 EMBL:AK068033 RefSeq:NP_001044899.2 UniGene:Os.14287
EnsemblPlants:LOC_Os01g64560.1 GeneID:4324795 KEGG:osa:4324795
Uniprot:Q5N9E6
Length = 904
Score = 135 (52.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 53/193 (27%), Positives = 84/193 (43%)
Query: 15 LRKQLAVAVRSIQWSYAIFWSLSAA---QQGVLEWGDGYYN--GDIKTRKTMQAMELT-P 68
LR L + WSYA+FW + A Q+ L WGDG+Y + +AM+L
Sbjct: 7 LRDSLRRLCTDVGWSYAVFWRATRAADSQRLKLVWGDGHYERAAGAPSISGFEAMDLLLK 66
Query: 69 DKIGLQRSKQLRELYESLLKGESELAYKRPSAALSPEDLTDAEWYYLVCMSFVFSSGQGL 128
+K RS R G E + AA D DA + + V G+G+
Sbjct: 67 EKAAALRSGTGRG------GGGGE-GHAADGAAGHSHDRVDALVHKAMAQQ-VHVVGEGV 118
Query: 129 PGRALANSETIWLCNA---QCADSKVFSRSLLAK-SASIQTVICFPHLD-GVIELGVTEL 183
G+A W+ + +C + + + A IQT+ P L GVI+LG T++
Sbjct: 119 IGQAALTGLHRWIVHDIVDECEEEDEVLLEMKGQFCAGIQTIAVIPVLPRGVIQLGSTKM 178
Query: 184 VPEDPSLLQHIKA 196
V E+ + + H+++
Sbjct: 179 VMEEAAFIDHVRS 191
Score = 59 (25.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 26/107 (24%), Positives = 44/107 (41%)
Query: 260 GNINEELHLDSADECSKGCEHNHQTEESFMVDGINGAASQVQSWHFVDDDLSNGI---PD 316
G+ +D + CS+ + +++++ V+ + S S D LS G D
Sbjct: 626 GSRQSSSSIDKSAGCSQ-TQESYKSQIRLWVENNHSVGSDSLSTGQASDSLSTGQCKRSD 684
Query: 317 SMHSSDHKSESLVNQAEGFPSSKDENMSHIQLKELQE--GNHTKLSL 361
+ S+ K A P KD M ++KEL+E N K S+
Sbjct: 685 EIGKSNRKRSRPGESAR--PRPKDRQMIQDRIKELREIVPNSAKCSI 729
Score = 44 (20.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 466 DKRTENEKFMVLRSMVPYISEVDKASILSDTIKYLKKLE 504
D++ ++ LR +VP ++ ++L TIK++ L+
Sbjct: 706 DRQMIQDRIKELREIVPNSAKCSIDTLLEKTIKHMLFLQ 744
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 311 SNGIPDSMHSSD 322
S G+P S HS D
Sbjct: 221 SLGVPTSSHSED 232
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 41/179 (22%), Positives = 93/179 (51%)
Query: 460 EEHISSD-KRTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYS 516
+EH+ ++ KR + NE+ + L +++P + + DKA++L D IK+LK+L+ RV++LE
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEE---- 186
Query: 517 VDSEPRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACD-IDETDPELNKFVPKDGL 575
+ K + + ++ + S Y LD+ + + A + + E++ F K +
Sbjct: 187 -ERVVTKKMDQSIILVKRSQVY----LDDDSSSYSSTCSAASPLSSSSDEVSIF--KQTM 239
Query: 576 ADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLD---AYSVVSSNLDGVLTLALK 631
++ + + D+LI + C + ++ I+ ++ L+ ++++ N V+T+ K
Sbjct: 240 PMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTK 298
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 51/155 (32%), Positives = 78/155 (50%)
Query: 471 NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEM 530
N++ +LRS+VP IS++D+ASIL D I YLK+L R+ +L + ++S P P
Sbjct: 320 NDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN---ELESTP-PGS----- 370
Query: 531 VEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELNKFVPKDGLADVKVSIQE-MDVLI 589
+ TS ++ H + +C + E + PK A V+V ++E V I
Sbjct: 371 LPPTSSSF-------HPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNI 423
Query: 590 EMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDG 624
M C R +LL M A++NL LD V S +G
Sbjct: 424 HMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 458
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 116 (45.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/81 (35%), Positives = 48/81 (59%)
Query: 438 HRSQKEICRKYC----PVTMESDNFCEEHISSD-KRTEN--EKFMVLRSMVPYISEVDKA 490
H+ E RK P + N ++HI ++ KR E ++F+ L ++VP + ++DKA
Sbjct: 126 HQKSDEFNRKGTKRAQPFSRNQSN-AQDHIIAERKRREKLTQRFVALSALVPGLKKMDKA 184
Query: 491 SILSDTIKYLKKLEARVEELE 511
S+L D +K++K L+ RV ELE
Sbjct: 185 SVLGDALKHIKYLQERVGELE 205
Score = 61 (26.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 532 EQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELNKFVPKDGLAD-----VKVSIQEMD 586
E+ + + KK + + K+ +D+ + + +DG +D ++V + D
Sbjct: 199 ERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSSSC-EDGFSDLDLPEIEVRFSDED 257
Query: 587 VLIEMRCPSREYILLDIMDAINNLHL 612
VLI++ C ++ L IM I LH+
Sbjct: 258 VLIKILCEKQKGHLAKIMAEIEKLHI 283
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 109 (43.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 438 HRSQKEICR--KYCPVTMESDNFCEEHISSD-KRTEN--EKFMVLRSMVPYISEVDKASI 492
H+ + I R K S + ++HI ++ KR E ++F+ L +++P + ++DKAS+
Sbjct: 101 HKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASV 160
Query: 493 LSDTIKYLKKLEARVEELE 511
L D IK++K L+ V+E E
Sbjct: 161 LGDAIKHIKYLQESVKEYE 179
Score = 61 (26.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 16/56 (28%), Positives = 30/56 (53%)
Query: 567 NKFVPKDGLADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNL 622
N+ L +++V + DVLI++ C ++ ++ IM I L L S+ +SN+
Sbjct: 215 NRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGL---SITNSNV 267
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 114 (45.2 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 460 EEHISSD-KRTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELE 511
+EHI ++ KR E +++F+ L +VP + ++DKAS+L D IKY+K+L+ +V+ LE
Sbjct: 180 QEHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLE 234
Score = 58 (25.5 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 13/65 (20%), Positives = 34/65 (52%)
Query: 574 GLADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKST 633
GL +++ + E VL+++ C +R+ L+ + + + L +++++N+ + +L T
Sbjct: 275 GLPEIEARVSERTVLVKIHCENRKGALITALSEVETIGL---TIMNTNVLPFTSSSLDIT 331
Query: 634 FRGAA 638
A
Sbjct: 332 IMATA 336
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 130 (50.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 47/155 (30%), Positives = 75/155 (48%)
Query: 471 NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEM 530
N++ +LRS+VP IS++D+ASIL D I+YLK+L ++ +L++ ++S P T
Sbjct: 349 NDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQN---ELESSPA-----TSS 400
Query: 531 VEQTSDNYDNKKLDNHKKPWINKRKACDIDETDPELNKFVPKDGLADVKVSIQE-MDVLI 589
+ T ++ P K + C P + P+ V+V ++E V I
Sbjct: 401 LPPTPTSFHPLTPTLPTLPSRIKEEICPSALPSPTGQQ--PR-----VEVRLREGRAVNI 453
Query: 590 EMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDG 624
M C R +LL M A+ L LD V S +G
Sbjct: 454 HMFCARRPGLLLSAMRAVEGLGLDVQQAVISCFNG 488
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 100 AALSPEDLTDAEWYY 114
AA +P L D +WY+
Sbjct: 53 AAQAPAPLLDEDWYF 67
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 55/218 (25%), Positives = 96/218 (44%)
Query: 446 RKYCPVTMESDNFCEEHISSDKRTENEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEA 505
RK P T E + C H+ NE++ L+ ++P S+ D+ASIL D I Y+ +L
Sbjct: 211 RKNKPFTTERERRC--HL-------NERYEALKLLIPSPSKGDRASILQDGIDYINELRR 261
Query: 506 RVEELESCMYSVDSEPRPKRNYTEMVEQTSDNYDNKKLDNH-------------KKPWIN 552
RV EL+ Y V+ + R+ V+ DN +NK LD+H KKP +
Sbjct: 262 RVSELK---YLVERKRCGGRHKNNEVD---DNNNNKNLDDHGNEDDDDDDENMEKKPESD 315
Query: 553 KRKACDIDETDPELNKFVPKDGLADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHL 612
C + + + K + +V V I + +V I++ + LL + ++ L L
Sbjct: 316 VIDQCSSNNS-LRCSWLQRKSKVTEVDVRIVDDEVTIKVVQKKKINCLLLVSKVLDQLQL 374
Query: 613 DAYSVVSSNLDGVLTLALKST-FRGAAIAPAGIIEQAL 649
D + V + + + + G+ I + I + +
Sbjct: 375 DLHHVAGGQIGEHYSFLFNTKIYEGSTIYASAIANRVI 412
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 115 (45.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/57 (35%), Positives = 42/57 (73%)
Query: 458 FCEEHISSDKRTE---NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELE 511
+ ++HI +++R N++F+ L +++P + ++DKA+IL D +KY+K+L+ +V+ LE
Sbjct: 164 YVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLE 220
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 577 DVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHL 612
+++V + E VL+ ++C + +L+ ++ + L L
Sbjct: 256 EIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRL 291
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 22/57 (38%), Positives = 44/57 (77%)
Query: 458 FCEEHISSD-KRTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELE 511
+ +EHI ++ KR E N++F+ L +++P + ++DKA+ILSD ++Y+K+++ ++ ELE
Sbjct: 189 YAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE 245
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 41/181 (22%), Positives = 85/181 (46%)
Query: 466 DKRTE-NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEE-------LESCMYSV 517
D+R + NEK LRS+VP I+++DKASI+ D I+Y+++L+A ++ LES +
Sbjct: 100 DRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAALESAA-AA 158
Query: 518 DSEPRPKRNYTEMVEQTSDNYDNKKLDNHKKPWINKRKACDIDE-TDPELNKFVPKDG-- 574
+ P + + Y + + + ++A + +D L P
Sbjct: 159 SAAPAAANPFAGLGADEEHEYGHHHPSSSSERTKKVKRALSVSSISDALLAAAAPAPPVE 218
Query: 575 LADVKVS-IQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVLTLALKST 633
+ +++VS + + +++ + C R + + A+ L L V+++N+ V + +
Sbjct: 219 IQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRL---RVITANITSVAGCPMHTL 275
Query: 634 F 634
F
Sbjct: 276 F 276
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 101 (40.6 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 446 RKYCPVTMESDNFCEEHISSD-KRTE--NEKFMVLRSMVPYISEVDKASILSDTIKYLKK 502
RK C S +EH+ ++ KR E +EKF+ L +++P + + DK +IL D I +K+
Sbjct: 104 RKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQ 163
Query: 503 LEARVEELE 511
L+ ++ L+
Sbjct: 164 LQEQLRTLK 172
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 575 LADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHL 612
L +++ I + D+LI + C + +++I++ I N L
Sbjct: 214 LPEIEAKISQNDILIRILCEKSKGCMINILNTIENFQL 251
Score = 38 (18.4 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 306 VDDDLSNGIPDSMHSSDHKSESLVNQAEGFPSSKDENMSHIQ-LKE 350
VD D I + + S ESL N SSK ++ H + L+E
Sbjct: 13 VDIDFDFNIYEENNLSP--DESLSNSRRADQSSKFDHQMHFECLRE 56
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 117 (46.2 bits), Expect = 0.00044, P = 0.00044
Identities = 45/191 (23%), Positives = 95/191 (49%)
Query: 471 NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEM 530
N++ LRS+VP IS++DKAS++ D+I Y+++L + + LE+ E R + + +
Sbjct: 67 NQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEA-------EIRELESRSTL 119
Query: 531 VEQTSDNYDNKKLDNHKKPWI--NKRKACDIDETDPELN-KFVPKDGLADVKVS-IQEMD 586
+E +YD + H + + N ++ + D + P + L ++KV+ + E
Sbjct: 120 LENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVL-EMKVTWMGEKT 178
Query: 587 VLIEMRCPSREYILLDIMDAINNLHLDA----YSVVSSNLDGVLTLALKSTFRGAAIAPA 642
V++ + C + ++ + + +L+L+ +S +S L L L + + + I+
Sbjct: 179 VVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQVTLSLSPSLISLF 238
Query: 643 G-IIEQALWKI 652
G +I +KI
Sbjct: 239 GNVITSTNYKI 249
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 112 (44.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 471 NEKFMVLRSMVPYISEVDKASILSDTIKYLKKLEARVEELESCMYSVDSEPRPKRNYTEM 530
N++ +LRS+VP IS++D+ SIL DTI Y+K+L R++ LE + P M
Sbjct: 195 NDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEE---EIGVTPEELDLLNTM 251
Query: 531 VEQTSDNYDNKKLDNHKK 548
+ +S N + + N K
Sbjct: 252 KDSSSGNNNEMLVRNSTK 269
Score = 52 (23.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 589 IEMRCPSREYILLDIMDAINNLHLDAYS-VVSSNLD-GVLTLALKSTFRGAAIAPAGIIE 646
IE+ CP+ +LL + A+ L L+ VVS D G+ L+ + ++ I+
Sbjct: 282 IEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVS-TDEIK 340
Query: 647 QALWKIAG 654
Q L++ AG
Sbjct: 341 QTLFRSAG 348
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 96 (38.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 439 RSQKEICRKYCPVTMESDNFCEEHISSDK---RTENEKFMVLRSMVP--YISEVDKASIL 493
R ++ K C E++ HI+ ++ R NE +LRS++P Y+ D+ASI+
Sbjct: 69 RKKRRRRAKSCKSREETETQRMTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIV 128
Query: 494 SDTIKYLKKLEARVEELES 512
I+++K+LE +++ LE+
Sbjct: 129 GGAIEFVKELEQQLQSLEA 147
Score = 67 (28.6 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 572 KDGLADVKVSIQEMDVLIEMRCPSREYILLDIMDAINNLHLDAYSVVSSNLDGVL--TLA 629
+ GLAD++VS+ E + + P R LL ++ + L L + + LD ++ TL+
Sbjct: 255 RSGLADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVLYTLS 314
Query: 630 LK 631
+K
Sbjct: 315 VK 316
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 656 639 0.00093 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 627 (67 KB)
Total size of DFA: 375 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 58.96u 0.14s 59.10t Elapsed: 00:00:02
Total cpu time: 58.97u 0.14s 59.11t Elapsed: 00:00:02
Start: Tue May 21 05:13:49 2013 End: Tue May 21 05:13:51 2013